View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13069_low_13 (Length: 221)
Name: NF13069_low_13
Description: NF13069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13069_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 45650229 - 45650421
Alignment:
| Q |
13 |
aagaatataataaagagtgagagaaaacaaagtgaagactgaaaactacccagatggcagggaagnnnnnnnngtgtcagaaaagcacgtgatgagaatg |
112 |
Q |
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| T |
45650229 |
aagaaaataataaagagtgagagaaaacaaagtgaagactgaaaactacccagatggcagggaagaaaaaaaagtgtcagaaaagcacgtgatgagaatg |
45650328 |
T |
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| Q |
113 |
gatggaacaatgaagtaaaataggtgaaaatgatgatgaaagtgtcaggttgaacagaagactactaatattactagaaaacaagttgttatt |
205 |
Q |
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| T |
45650329 |
gatggaacaatgaagtaaaataggtgaaaatgatgatgaaagtgtcaggttgaacagaagactactactattactagaaaacaagttgttatt |
45650421 |
T |
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