View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13069_low_14 (Length: 207)
Name: NF13069_low_14
Description: NF13069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13069_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 4180401 - 4180227
Alignment:
| Q |
17 |
gtgcatcagcaaccgatccgatccaacaagaaacatgaacaggcttattttcttcatgaaaaacaacctcatacactccaaaatcattccatgatgcaat |
116 |
Q |
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|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
4180401 |
gtgcatcagcaaccgacccaatccaacaagaaacatgaacaggcttattttcttcatgaaaaactacctcatacactccaaaatcattccatgatgcaat |
4180302 |
T |
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| Q |
117 |
gcaattaatttgattcttaatgcccaattcattcaaagtgtatccactctttgtgacactttctacctcaatgac |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4180301 |
gcaattaatttgattcttaatgcccaattcattcaaagtgtatccactctttgtgacactttctacctcaatgac |
4180227 |
T |
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