View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13069_low_5 (Length: 383)
Name: NF13069_low_5
Description: NF13069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13069_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 3 - 364
Target Start/End: Original strand, 45422107 - 45422468
Alignment:
| Q |
3 |
cagagatgacaaaaagcaatggcctaggttcctctcacatgttcacatatttaactcctttcaaaaaaccaagagtggattcaaaccaaactgcaacaac |
102 |
Q |
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| T |
45422107 |
cagagatgacaaaaagcaatggcctaggttcctctcacatgttcacatatttaactcctctcaaaaaaccaagagtggattcaaaccaaactgcaacaac |
45422206 |
T |
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| Q |
103 |
aaactcacagaaacagtacttgatggggtgtgaatatcnnnnnnntggaaaagtgaacttctcaaacttttctatacctgcagtgtttctcaaatcaaat |
202 |
Q |
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| T |
45422207 |
aaactcacagaaacagtacttgatggggtgtgaatatcaaaaaaatggaaaagtgaacttctcaaacttttctatacctgcagtgtttctcaaatcaaat |
45422306 |
T |
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| Q |
203 |
caacaaagagtacaagagaaagaatcaaaagcagttgcttgtacaaaatttcaacaacaaaaacacttaactttaaatgctgctaccaaatcaaactctg |
302 |
Q |
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| T |
45422307 |
caacaaagagtacaagagaaagaatcaaaagcagttgcttgtacaaaatttcaacaacaaaaacacttaactttaaatgctgctaccaaatcaaactctg |
45422406 |
T |
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| Q |
303 |
gatatgaaagaagtagagaattactaccaactgttgatgaacattctgaagctgctgctagc |
364 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45422407 |
gatatgaaagaagtagagaattactaccaactgttgatgaacattctgaagctgctgctagc |
45422468 |
T |
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