View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13069_low_8 (Length: 303)
Name: NF13069_low_8
Description: NF13069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13069_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 293
Target Start/End: Original strand, 34953298 - 34953573
Alignment:
| Q |
18 |
caaagtggagaaggtgttttgaattcagccatggcttaacaagcaccactgaatcaaacattgttggatctccaacaccatcactcttcgcttgtgtaac |
117 |
Q |
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| T |
34953298 |
caaagtggagaaggtgttttgaattcagccatggcttaacaagcaccactgaatcaaacattgttggatctccaacaccatcactcttcgcttgtgtaac |
34953397 |
T |
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| Q |
118 |
ccatatcttcatatagtatttgatcccagaaactacttgttgttgcgcctccaccacttcaacaaaccttaactctccttccccttccttccatatcttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
34953398 |
ccatatcttcatatagtatttgatcccagaaactacttgttgttgcgcctccaccacttccacaaaccttaactctccttccccttccttccatatcttc |
34953497 |
T |
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| Q |
218 |
acactccggttatactcctccaccgcaaatcttcccagttcttgcacctcgtcgtttgttctcacgtttgcaacct |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34953498 |
acactccggttatactcctccaccgcaaatcttcccagttcttgcacctcgtcgtttgttctcacgtttgcaacct |
34953573 |
T |
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