View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1306_high_22 (Length: 262)
Name: NF1306_high_22
Description: NF1306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1306_high_22 |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23119018 - 23118785
Alignment:
| Q |
1 |
aggaaaagggatgaaacaaaattcggaaaaattgctgaggaaaatcaatattttgagcaatttaatactcctccagatcaccctccggaacaaaatctag |
100 |
Q |
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| T |
23119018 |
aggaaaagggatgaaacaaaattcggaaaaattgctgaggaaaatcaatattttgagcaatttaatactcctccagatcactctccggaacaaaatctag |
23118919 |
T |
|
| Q |
101 |
atcgatctccgattctttaggagtatcaacaactgcttgaagactttggaaatcaatatgctgccttttctgctcaagaagccagtgatgtgcttaagag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
23118918 |
atcgatctccgattctttaggagtatcaacaactgcttgaagactttggaaatcaatatgctgccttttctgctcaaaaagccagtgatgtgcttaagag |
23118819 |
T |
|
| Q |
201 |
cttaacatcacaccctttcacaacccaacaggtt |
234 |
Q |
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||| |||||||||||||||||||||||||||||| |
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| T |
23118818 |
cttcacatcacaccctttcacaacccaacaggtt |
23118785 |
T |
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