View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1306_high_4 (Length: 613)

Name: NF1306_high_4
Description: NF1306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1306_high_4
NF1306_high_4
[»] chr4 (82 HSPs)
chr4 (41-254)||(47867817-47868030)
chr4 (41-254)||(2229185-2229398)
chr4 (44-254)||(20281534-20281742)
chr4 (41-254)||(14332697-14332911)
chr4 (97-254)||(4058709-4058866)
chr4 (45-254)||(26916267-26916476)
chr4 (97-254)||(29203500-29203657)
chr4 (41-250)||(56318075-56318285)
chr4 (41-254)||(41414612-41414823)
chr4 (97-254)||(39078151-39078307)
chr4 (97-254)||(10069691-10069848)
chr4 (97-254)||(20716174-20716331)
chr4 (97-254)||(55580663-55580821)
chr4 (119-254)||(7654633-7654768)
chr4 (119-254)||(16604847-16604982)
chr4 (103-254)||(24940365-24940516)
chr4 (41-254)||(28669002-28669214)
chr4 (97-254)||(17794542-17794699)
chr4 (97-254)||(5483279-5483436)
chr4 (97-254)||(35310743-35310900)
chr4 (97-254)||(42915523-42915681)
chr4 (97-250)||(1585354-1585505)
chr4 (97-254)||(48793631-48793784)
chr4 (97-254)||(8683307-8683462)
chr4 (108-232)||(5815474-5815598)
chr4 (97-191)||(35529666-35529760)
chr4 (107-229)||(8178265-8178387)
chr4 (97-186)||(52535654-52535743)
chr4 (109-254)||(32203226-32203364)
chr4 (107-224)||(46070553-46070668)
chr4 (183-254)||(16473828-16473899)
chr4 (107-230)||(47516216-47516339)
chr4 (107-229)||(5841805-5841927)
chr4 (108-254)||(19351851-19352003)
chr4 (97-239)||(32323278-32323419)
chr4 (97-254)||(50080457-50080609)
chr4 (107-254)||(5064656-5064803)
chr4 (97-191)||(25297286-25297380)
chr4 (161-254)||(21722683-21722776)
chr4 (98-233)||(50145731-50145865)
chr4 (97-254)||(14583723-14583880)
chr4 (100-229)||(17186822-17186940)
chr4 (97-243)||(31280193-31280329)
chr4 (97-254)||(12002634-12002793)
chr4 (147-249)||(32280009-32280111)
chr4 (112-254)||(17799135-17799277)
chr4 (107-201)||(23978169-23978263)
chr4 (107-229)||(37911888-37912010)
chr4 (107-225)||(49080261-49080379)
chr4 (168-229)||(29511490-29511551)
chr4 (107-227)||(32410332-32410452)
chr4 (107-254)||(8013090-8013237)
chr4 (107-229)||(28318445-28318565)
chr4 (107-225)||(28142652-28142769)
chr4 (147-250)||(25268523-25268626)
chr4 (108-191)||(40553774-40553857)
chr4 (46-84)||(7654570-7654608)
chr4 (106-231)||(30011951-30012074)
chr4 (41-78)||(29203414-29203451)
chr4 (107-229)||(53848471-53848586)
chr4 (41-76)||(17186992-17187027)
chr4 (41-75)||(16605046-16605080)
chr4 (41-75)||(35529578-35529612)
chr4 (41-75)||(42915436-42915470)
chr4 (97-138)||(32280104-32280145)
chr4 (147-250)||(37872657-37872757)
chr4 (41-74)||(55580574-55580607)
chr4 (106-230)||(5222291-5222415)
chr4 (41-76)||(4058621-4058656)
chr4 (215-254)||(7438760-7438799)
chr4 (41-76)||(10069603-10069638)
chr4 (41-76)||(39078064-39078099)
chr4 (106-201)||(40411104-40411199)
chr4 (45-75)||(29180576-29180606)
chr4 (168-254)||(31532454-31532540)
chr4 (45-75)||(32012491-32012521)
chr4 (41-75)||(48793837-48793871)
chr4 (106-231)||(10591500-10591625)
chr4 (97-138)||(21722783-21722824)
chr4 (46-75)||(35310954-35310983)
chr4 (47-75)||(8683515-8683543)
chr4 (146-254)||(38140713-38140821)
[»] chr8 (73 HSPs)
chr8 (41-254)||(7022412-7022625)
chr8 (41-254)||(7858466-7858679)
chr8 (97-254)||(34890183-34890340)
chr8 (97-254)||(36190766-36190923)
chr8 (96-254)||(26483525-26483683)
chr8 (97-254)||(43216356-43216513)
chr8 (97-243)||(31734109-31734255)
chr8 (97-254)||(15957920-15958079)
chr8 (97-249)||(28348605-28348756)
chr8 (41-254)||(41086395-41086609)
chr8 (97-250)||(8107630-8107783)
chr8 (97-254)||(24892832-24892992)
chr8 (97-238)||(8711870-8712011)
chr8 (97-243)||(13143758-13143904)
chr8 (97-250)||(34158303-34158457)
chr8 (97-250)||(35456038-35456190)
chr8 (111-254)||(30575843-30575987)
chr8 (119-254)||(35525603-35525736)
chr8 (97-254)||(8709795-8709950)
chr8 (135-254)||(13143954-13144073)
chr8 (97-254)||(29920277-29920434)
chr8 (97-194)||(7499720-7499818)
chr8 (97-254)||(16879401-16879558)
chr8 (97-254)||(15824646-15824797)
chr8 (97-244)||(4046912-4047060)
chr8 (102-192)||(3642041-3642130)
chr8 (107-229)||(8673385-8673507)
chr8 (97-207)||(2052830-2052938)
chr8 (107-254)||(17713227-17713374)
chr8 (134-250)||(16358125-16358240)
chr8 (107-214)||(26954441-26954548)
chr8 (107-254)||(41362316-41362463)
chr8 (109-254)||(38072169-38072314)
chr8 (107-229)||(2628198-2628320)
chr8 (107-225)||(25195085-25195202)
chr8 (107-254)||(8745587-8745734)
chr8 (107-229)||(17336746-17336868)
chr8 (107-224)||(4038920-4039037)
chr8 (97-211)||(41755920-41756033)
chr8 (99-254)||(44663801-44663953)
chr8 (108-228)||(5217397-5217517)
chr8 (107-254)||(27819663-27819810)
chr8 (169-239)||(4480841-4480911)
chr8 (148-229)||(28497172-28497253)
chr8 (97-139)||(13144085-13144127)
chr8 (168-218)||(14693434-14693484)
chr8 (162-239)||(6401679-6401756)
chr8 (97-216)||(33563558-33563681)
chr8 (106-231)||(34713532-34713657)
chr8 (41-78)||(34890390-34890427)
chr8 (112-176)||(7670749-7670813)
chr8 (107-254)||(17314834-17314981)
chr8 (41-75)||(4047113-4047147)
chr8 (156-254)||(8712577-8712675)
chr8 (107-164)||(14576244-14576301)
chr8 (44-76)||(24892748-24892780)
chr8 (107-203)||(29147297-29147393)
chr8 (195-254)||(2052955-2053014)
chr8 (41-76)||(13143671-13143706)
chr8 (45-76)||(13144179-13144210)
chr8 (41-76)||(30576045-30576080)
chr8 (41-76)||(35525505-35525540)
chr8 (41-76)||(36190678-36190713)
chr8 (167-254)||(40773412-40773499)
chr8 (219-254)||(45190700-45190735)
chr8 (45-75)||(36537990-36538020)
chr8 (45-75)||(41809022-41809052)
chr8 (121-182)||(374103-374162)
chr8 (169-254)||(3225529-3225617)
chr8 (205-254)||(7499817-7499866)
chr8 (217-254)||(11158675-11158712)
chr8 (110-223)||(24510735-24510848)
chr8 (106-191)||(31133101-31133186)
[»] chr7 (61 HSPs)
chr7 (41-254)||(14805810-14806022)
chr7 (41-254)||(15252804-15253016)
chr7 (41-254)||(46760264-46760478)
chr7 (41-254)||(25737634-25737847)
chr7 (41-254)||(18102469-18102683)
chr7 (42-254)||(19912776-19912988)
chr7 (41-254)||(45485893-45486108)
chr7 (41-254)||(35923192-35923404)
chr7 (97-254)||(6191041-6191198)
chr7 (97-250)||(20123691-20123844)
chr7 (97-254)||(25944572-25944729)
chr7 (97-254)||(4910642-4910797)
chr7 (97-254)||(47779600-47779757)
chr7 (97-254)||(22632085-22632242)
chr7 (97-238)||(47557622-47557765)
chr7 (135-250)||(12632355-12632470)
chr7 (97-254)||(11780014-11780170)
chr7 (97-254)||(14574560-14574717)
chr7 (97-254)||(44682874-44683030)
chr7 (97-216)||(9158086-9158204)
chr7 (97-254)||(15995715-15995873)
chr7 (97-243)||(2610586-2610732)
chr7 (103-254)||(48413723-48413866)
chr7 (97-237)||(35068872-35068999)
chr7 (107-229)||(39170540-39170662)
chr7 (96-255)||(4237720-4237880)
chr7 (97-250)||(16917468-16917620)
chr7 (41-138)||(12633110-12633207)
chr7 (98-193)||(27810803-27810898)
chr7 (107-230)||(38260322-38260445)
chr7 (122-228)||(31549936-31550042)
chr7 (107-229)||(31768994-31769116)
chr7 (119-202)||(8015732-8015813)
chr7 (106-254)||(35084067-35084215)
chr7 (108-203)||(24151640-24151734)
chr7 (107-254)||(35887976-35888123)
chr7 (141-207)||(4069043-4069109)
chr7 (108-254)||(37767026-37767172)
chr7 (106-254)||(33153039-33153187)
chr7 (41-78)||(25944485-25944522)
chr7 (41-130)||(16562688-16562778)
chr7 (41-130)||(16602884-16602974)
chr7 (97-254)||(19492400-19492559)
chr7 (106-254)||(40560382-40560530)
chr7 (167-229)||(10248594-10248657)
chr7 (106-225)||(21654116-21654235)
chr7 (41-80)||(47557928-47557967)
chr7 (107-229)||(3777984-3778106)
chr7 (108-237)||(29713196-29713325)
chr7 (106-223)||(30082353-30082470)
chr7 (98-145)||(4068972-4069020)
chr7 (108-188)||(22369233-22369313)
chr7 (44-80)||(39174193-39174229)
chr7 (108-230)||(33092669-33092792)
chr7 (41-75)||(18800919-18800953)
chr7 (198-244)||(31280546-31280592)
chr7 (41-75)||(47778681-47778715)
chr7 (106-231)||(3157436-3157561)
chr7 (42-75)||(9158000-9158033)
chr7 (106-159)||(41890303-41890356)
chr7 (44-76)||(44682784-44682816)
[»] chr6 (27 HSPs)
chr6 (41-254)||(21542358-21542571)
chr6 (41-254)||(35129062-35129276)
chr6 (96-254)||(11082253-11082411)
chr6 (41-254)||(3095728-3095942)
chr6 (44-250)||(34177653-34177859)
chr6 (97-254)||(7274883-7275040)
chr6 (97-254)||(12461437-12461594)
chr6 (97-254)||(30794200-30794357)
chr6 (97-231)||(31107187-31107320)
chr6 (97-250)||(17751756-17751909)
chr6 (107-229)||(4031991-4032113)
chr6 (107-229)||(4987947-4988069)
chr6 (107-229)||(16524384-16524505)
chr6 (97-175)||(9428766-9428844)
chr6 (111-229)||(16013465-16013583)
chr6 (107-229)||(3888431-3888553)
chr6 (97-254)||(14573136-14573293)
chr6 (106-231)||(17598294-17598419)
chr6 (202-254)||(9428846-9428898)
chr6 (106-230)||(21963958-21964082)
chr6 (161-203)||(5300659-5300701)
chr6 (108-226)||(16870828-16870947)
chr6 (168-254)||(15830760-15830846)
chr6 (173-254)||(5822042-5822123)
chr6 (142-254)||(5881760-5881872)
chr6 (147-250)||(14709795-14709899)
chr6 (105-193)||(26540253-26540341)
[»] chr5 (75 HSPs)
chr5 (41-254)||(6686323-6686538)
chr5 (41-254)||(11261892-11262105)
chr5 (44-254)||(43589970-43590180)
chr5 (41-254)||(37522597-37522811)
chr5 (41-254)||(37562769-37562983)
chr5 (97-254)||(42273645-42273800)
chr5 (97-254)||(20644010-20644167)
chr5 (97-254)||(34425327-34425483)
chr5 (99-254)||(20039100-20039255)
chr5 (97-243)||(32110998-32111144)
chr5 (97-254)||(38130121-38130281)
chr5 (98-254)||(19413138-19413294)
chr5 (97-223)||(38280843-38280969)
chr5 (97-247)||(8225459-8225608)
chr5 (97-254)||(25840860-25841017)
chr5 (107-254)||(12912303-12912449)
chr5 (101-250)||(43454335-43454484)
chr5 (97-244)||(39505250-39505397)
chr5 (97-254)||(4463356-4463511)
chr5 (97-254)||(17351384-17351541)
chr5 (97-206)||(32017700-32017808)
chr5 (97-254)||(41625520-41625675)
chr5 (97-244)||(5984126-5984280)
chr5 (102-250)||(42104262-42104408)
chr5 (97-192)||(9957489-9957581)
chr5 (98-216)||(104260-104386)
chr5 (135-251)||(23233445-23233561)
chr5 (135-254)||(12792794-12792903)
chr5 (107-229)||(5369064-5369186)
chr5 (107-203)||(10153987-10154083)
chr5 (135-254)||(12729892-12730001)
chr5 (107-224)||(3463853-3463970)
chr5 (107-254)||(16153354-16153500)
chr5 (107-228)||(8959646-8959767)
chr5 (97-205)||(7071234-7071342)
chr5 (107-254)||(8506443-8506584)
chr5 (107-229)||(5736273-5736395)
chr5 (97-139)||(12730103-12730145)
chr5 (106-191)||(24439575-24439660)
chr5 (209-254)||(32019929-32019974)
chr5 (41-84)||(842744-842787)
chr5 (167-229)||(1144524-1144586)
chr5 (108-254)||(32079512-32079657)
chr5 (108-229)||(6391876-6391997)
chr5 (41-78)||(9957631-9957668)
chr5 (97-134)||(12792929-12792966)
chr5 (107-225)||(28907074-28907192)
chr5 (107-225)||(28943469-28943587)
chr5 (167-228)||(29307221-29307282)
chr5 (42-78)||(20643924-20643960)
chr5 (141-225)||(30703641-30703725)
chr5 (108-239)||(8146730-8146860)
chr5 (41-76)||(8225372-8225407)
chr5 (41-76)||(42273558-42273593)
chr5 (208-254)||(9957443-9957488)
chr5 (41-75)||(39505450-39505484)
chr5 (106-231)||(8146044-8146169)
chr5 (106-231)||(12638892-12639017)
chr5 (107-198)||(5659584-5659676)
chr5 (147-254)||(30893258-30893365)
chr5 (41-76)||(104437-104472)
chr5 (97-128)||(842698-842729)
chr5 (41-76)||(12730204-12730239)
chr5 (41-76)||(34425239-34425274)
chr5 (97-151)||(446000-446054)
chr5 (97-171)||(1238522-1238596)
chr5 (44-78)||(7071150-7071184)
chr5 (97-131)||(23233395-23233429)
chr5 (41-75)||(25840772-25840806)
chr5 (106-231)||(13146732-13146857)
chr5 (105-182)||(29493592-29493669)
chr5 (168-229)||(32432319-32432380)
chr5 (44-76)||(12793024-12793056)
chr5 (167-231)||(16286114-16286178)
chr5 (106-134)||(17825326-17825354)
[»] scaffold0300 (1 HSPs)
scaffold0300 (44-254)||(581-791)
[»] chr1 (90 HSPs)
chr1 (41-254)||(32624013-32624227)
chr1 (41-250)||(39555598-39555807)
chr1 (41-244)||(12448985-12449188)
chr1 (44-254)||(24190414-24190622)
chr1 (41-254)||(2125977-2126191)
chr1 (97-254)||(15959648-15959805)
chr1 (96-254)||(35691387-35691546)
chr1 (97-254)||(6785452-6785608)
chr1 (97-254)||(6786834-6786991)
chr1 (97-254)||(40718674-40718831)
chr1 (97-254)||(33369549-33369703)
chr1 (42-254)||(32983180-32983390)
chr1 (97-254)||(45226134-45226291)
chr1 (45-246)||(43667319-43667517)
chr1 (97-254)||(28016754-28016909)
chr1 (97-254)||(39932580-39932737)
chr1 (97-254)||(42965824-42965979)
chr1 (97-254)||(47014501-47014655)
chr1 (46-254)||(28120763-28120970)
chr1 (97-254)||(46542980-46543135)
chr1 (97-254)||(7467970-7468128)
chr1 (105-250)||(13136566-13136708)
chr1 (97-254)||(1820411-1820568)
chr1 (97-250)||(47600048-47600204)
chr1 (97-249)||(46818515-46818667)
chr1 (97-250)||(2246026-2246179)
chr1 (97-250)||(3076291-3076444)
chr1 (97-250)||(3875031-3875186)
chr1 (147-250)||(11241073-11241176)
chr1 (97-254)||(24728634-24728792)
chr1 (97-254)||(33431557-33431712)
chr1 (97-254)||(44148844-44148997)
chr1 (97-250)||(37735395-37735548)
chr1 (122-254)||(32742210-32742342)
chr1 (100-211)||(16854139-16854250)
chr1 (97-254)||(3861703-3861858)
chr1 (97-211)||(50369954-50370071)
chr1 (98-222)||(10558796-10558920)
chr1 (97-244)||(25391680-25391824)
chr1 (107-229)||(5858404-5858526)
chr1 (97-202)||(6787050-6787154)
chr1 (97-217)||(23392211-23392330)
chr1 (97-244)||(43765290-43765438)
chr1 (147-254)||(52984979-52985086)
chr1 (107-229)||(5950445-5950567)
chr1 (107-229)||(7397712-7397834)
chr1 (113-250)||(7875952-7876091)
chr1 (97-254)||(47302916-47303071)
chr1 (97-250)||(1034854-1035004)
chr1 (107-229)||(16688142-16688264)
chr1 (147-250)||(30221771-30221874)
chr1 (107-254)||(45840074-45840220)
chr1 (107-229)||(37538815-37538937)
chr1 (193-254)||(4672923-4672984)
chr1 (107-230)||(8889729-8889845)
chr1 (135-250)||(32318571-32318687)
chr1 (97-250)||(50012587-50012727)
chr1 (119-254)||(298676-298812)
chr1 (107-225)||(25185341-25185459)
chr1 (107-229)||(44510252-44510374)
chr1 (115-181)||(14086966-14087030)
chr1 (123-254)||(30701393-30701524)
chr1 (107-254)||(35366211-35366358)
chr1 (108-254)||(52841453-52841599)
chr1 (109-189)||(47026655-47026736)
chr1 (107-210)||(15912204-15912307)
chr1 (107-229)||(41063747-41063870)
chr1 (167-254)||(50176588-50176675)
chr1 (108-254)||(42724101-42724247)
chr1 (107-207)||(13351686-13351786)
chr1 (97-153)||(50665259-50665315)
chr1 (107-186)||(34102049-34102127)
chr1 (108-254)||(7190663-7190809)
chr1 (107-225)||(16661521-16661639)
chr1 (41-76)||(6786746-6786781)
chr1 (41-76)||(7468170-7468205)
chr1 (41-76)||(28016961-28016996)
chr1 (42-76)||(6787208-6787242)
chr1 (97-135)||(11241039-11241077)
chr1 (105-191)||(28916589-28916675)
chr1 (41-75)||(44149050-44149084)
chr1 (147-221)||(51338938-51339012)
chr1 (41-78)||(15959855-15959892)
chr1 (106-231)||(23873861-23873986)
chr1 (107-180)||(39151242-39151315)
chr1 (106-231)||(43656071-43656196)
chr1 (107-151)||(43359696-43359740)
chr1 (106-231)||(35884212-35884337)
chr1 (106-186)||(44056377-44056457)
chr1 (173-229)||(46803704-46803760)
[»] chr2 (58 HSPs)
chr2 (44-254)||(35517065-35517276)
chr2 (41-254)||(28599155-28599369)
chr2 (41-254)||(6110206-6110421)
chr2 (41-250)||(45085197-45085406)
chr2 (41-249)||(41528196-41528404)
chr2 (97-254)||(3201322-3201479)
chr2 (97-254)||(19264095-19264253)
chr2 (97-254)||(45660361-45660521)
chr2 (97-250)||(11617020-11617173)
chr2 (97-254)||(33198638-33198795)
chr2 (97-254)||(28858305-28858465)
chr2 (97-243)||(14873958-14874105)
chr2 (97-254)||(12938238-12938395)
chr2 (404-519)||(23690274-23690388)
chr2 (97-254)||(29524048-29524205)
chr2 (97-254)||(25572042-25572198)
chr2 (100-254)||(8701601-8701755)
chr2 (303-403)||(23690582-23690683)
chr2 (97-254)||(24204536-24204693)
chr2 (97-254)||(9864725-9864881)
chr2 (97-250)||(6765944-6766098)
chr2 (97-223)||(40584436-40584562)
chr2 (97-254)||(33677479-33677636)
chr2 (97-254)||(5963197-5963353)
chr2 (97-250)||(30830607-30830760)
chr2 (122-253)||(35115811-35115943)
chr2 (97-254)||(7645234-7645394)
chr2 (101-254)||(35022897-35023051)
chr2 (168-254)||(43415468-43415554)
chr2 (97-254)||(44454987-44455142)
chr2 (107-229)||(26998323-26998445)
chr2 (97-207)||(30421236-30421346)
chr2 (125-254)||(40808727-40808853)
chr2 (107-230)||(32010108-32010231)
chr2 (107-229)||(32273677-32273799)
chr2 (114-229)||(9709526-9709641)
chr2 (107-229)||(38071002-38071123)
chr2 (97-183)||(39696877-39696963)
chr2 (99-238)||(4707419-4707558)
chr2 (107-225)||(4891675-4891793)
chr2 (126-176)||(5280592-5280642)
chr2 (107-229)||(20380129-20380251)
chr2 (107-254)||(44442137-44442285)
chr2 (107-203)||(8032726-8032823)
chr2 (107-229)||(11030962-11031077)
chr2 (197-254)||(5280537-5280595)
chr2 (168-213)||(16494974-16495019)
chr2 (41-78)||(19264008-19264045)
chr2 (147-254)||(32428019-32428127)
chr2 (42-80)||(3201276-3201314)
chr2 (106-191)||(18833980-18834065)
chr2 (41-76)||(5280697-5280732)
chr2 (41-76)||(33198851-33198886)
chr2 (41-76)||(38070924-38070959)
chr2 (41-76)||(45660271-45660306)
chr2 (41-75)||(25571953-25571987)
chr2 (41-75)||(29524258-29524292)
chr2 (41-75)||(40808930-40808964)
[»] scaffold0045 (1 HSPs)
scaffold0045 (41-254)||(77897-78110)
[»] chr3 (93 HSPs)
chr3 (41-254)||(23311560-23311773)
chr3 (41-254)||(37042384-37042597)
chr3 (41-254)||(11054278-11054488)
chr3 (96-250)||(30189569-30189724)
chr3 (97-254)||(14752175-14752332)
chr3 (97-254)||(28875406-28875563)
chr3 (97-254)||(7866450-7866607)
chr3 (97-254)||(50651004-50651161)
chr3 (41-254)||(36546486-36546699)
chr3 (41-254)||(36561616-36561829)
chr3 (97-243)||(6438083-6438229)
chr3 (97-254)||(47864191-47864348)
chr3 (97-254)||(35963152-35963309)
chr3 (97-254)||(46711625-46711781)
chr3 (101-254)||(579112-579258)
chr3 (97-254)||(6075081-6075238)
chr3 (97-254)||(37074958-37075117)
chr3 (97-248)||(53270233-53270386)
chr3 (97-254)||(54464863-54465019)
chr3 (97-254)||(19464075-19464234)
chr3 (97-247)||(32619804-32619954)
chr3 (97-254)||(50730109-50730266)
chr3 (97-254)||(50782588-50782745)
chr3 (97-254)||(2927289-2927447)
chr3 (97-249)||(41476308-41476453)
chr3 (97-254)||(8703109-8703262)
chr3 (97-254)||(9054996-9055149)
chr3 (97-254)||(26208014-26208171)
chr3 (97-254)||(26724958-26725115)
chr3 (98-250)||(20847240-20847391)
chr3 (97-254)||(29235193-29235344)
chr3 (156-254)||(9264610-9264708)
chr3 (102-203)||(34722623-34722724)
chr3 (41-250)||(23910484-23910675)
chr3 (144-254)||(31836966-31837076)
chr3 (97-225)||(3972275-3972402)
chr3 (97-225)||(3997476-3997603)
chr3 (107-254)||(8096985-8097132)
chr3 (97-254)||(47115849-47116006)
chr3 (97-185)||(46557237-46557325)
chr3 (107-254)||(22479021-22479168)
chr3 (107-254)||(30454692-30454838)
chr3 (97-191)||(6752670-6752764)
chr3 (107-209)||(34194892-34194994)
chr3 (114-227)||(16032981-16033094)
chr3 (107-230)||(38401384-38401507)
chr3 (97-188)||(47866946-47867036)
chr3 (97-166)||(33974614-33974683)
chr3 (97-201)||(38674870-38674974)
chr3 (107-254)||(10114915-10115062)
chr3 (107-254)||(22455975-22456122)
chr3 (107-229)||(7886609-7886731)
chr3 (107-229)||(21214245-21214367)
chr3 (107-229)||(46918205-46918327)
chr3 (107-222)||(10252015-10252130)
chr3 (107-254)||(47443941-47444087)
chr3 (161-254)||(33973533-33973627)
chr3 (97-153)||(48802548-48802604)
chr3 (107-222)||(10014273-10014388)
chr3 (145-254)||(3084147-3084256)
chr3 (106-231)||(31126214-31126339)
chr3 (147-254)||(8769546-8769651)
chr3 (97-160)||(9264008-9264071)
chr3 (107-229)||(2994407-2994532)
chr3 (154-254)||(8764646-8764744)
chr3 (41-78)||(14752382-14752419)
chr3 (107-212)||(48291826-48291931)
chr3 (106-191)||(51426621-51426706)
chr3 (169-229)||(6784390-6784450)
chr3 (102-137)||(34722564-34722599)
chr3 (172-254)||(25242145-25242227)
chr3 (161-203)||(54725628-54725670)
chr3 (177-254)||(17587779-17587856)
chr3 (97-164)||(41936248-41936313)
chr3 (106-225)||(1335112-1335231)
chr3 (41-76)||(6074995-6075030)
chr3 (41-76)||(7866659-7866694)
chr3 (99-138)||(8769644-8769683)
chr3 (41-76)||(22479211-22479246)
chr3 (147-230)||(30612221-30612304)
chr3 (41-76)||(37074871-37074906)
chr3 (108-210)||(23209291-23209393)
chr3 (156-254)||(31292664-31292762)
chr3 (97-139)||(36509540-36509582)
chr3 (145-191)||(45868536-45868582)
chr3 (46-75)||(2927206-2927235)
chr3 (99-136)||(8764746-8764783)
chr3 (42-75)||(19463988-19464021)
chr3 (41-78)||(28875319-28875356)
chr3 (208-248)||(2878213-2878253)
chr3 (45-73)||(33974738-33974766)
chr3 (167-231)||(34022662-34022726)
chr3 (224-252)||(47866893-47866921)
[»] scaffold0774 (1 HSPs)
scaffold0774 (41-243)||(3447-3649)
[»] scaffold0442 (1 HSPs)
scaffold0442 (41-250)||(9985-10194)
[»] scaffold0018 (1 HSPs)
scaffold0018 (45-254)||(154805-155013)
[»] scaffold0062 (1 HSPs)
scaffold0062 (97-254)||(44779-44936)
[»] scaffold0132 (4 HSPs)
scaffold0132 (97-254)||(1008-1165)
scaffold0132 (97-254)||(8968-9125)
scaffold0132 (41-76)||(921-956)
scaffold0132 (41-76)||(8881-8916)
[»] scaffold0009 (3 HSPs)
scaffold0009 (97-254)||(157790-157947)
scaffold0009 (97-188)||(52676-52767)
scaffold0009 (41-75)||(157703-157737)
[»] scaffold0111 (1 HSPs)
scaffold0111 (97-244)||(40175-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (97-227)||(160246-160376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (107-230)||(5907-6030)
[»] scaffold0005 (1 HSPs)
scaffold0005 (97-254)||(233495-233652)
[»] scaffold0010 (1 HSPs)
scaffold0010 (128-229)||(160952-161053)
[»] scaffold0330 (1 HSPs)
scaffold0330 (107-229)||(3174-3296)
[»] scaffold1786 (2 HSPs)
scaffold1786 (147-217)||(893-963)
scaffold1786 (97-138)||(860-900)
[»] scaffold1157 (1 HSPs)
scaffold1157 (157-239)||(1690-1772)


Alignment Details
Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 47867817 - 47868030
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||| ||||||||||||||| |||           |||||||||||||||||||||||||||||||||||||||||||||    
T  47867817 gtcccaaaatataagcaaaaaagaaaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 47867916  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  47867917 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattc 47868016  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  47868017 ttatgttttagttt 47868030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 2229185 - 2229398
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||| |||||||||||||||||||||||||||| ||    
T  2229185 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttt 2229284  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  2229285 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattc 2229384  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  2229385 ttatgttttagttt 2229398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 20281534 - 20281742
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 143  Q
    |||||||||||||||||||||||  ||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20281534 ccaaaatataagcaaaaaagaca--cttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctttttct 20281631  T
Q  144 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20281632 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattctta 20281731  T
Q  244 tgttttagttt 254  Q
    |||||||||||    
T  20281732 tgttttagttt 20281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 14332697 - 14332911
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||||||||||||||||    
T  14332697 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctct 14332796  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  14332797 ttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaaccatattccaaatt 14332896  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  14332897 cttatgttttagttt 14332911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 4058709 - 4058866
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  4058709 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4058809 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 4058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 45 - 254
Target Start/End: Original strand, 26916267 - 26916476
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctt 144  Q
    |||||||||||||||||||| ||||||||||| ||| |||            ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  26916267 caaaatataagcaaaaaagataaacttttatccttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttatttttctt 26916366  T
Q  145 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26916367 tcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaccatactccaaattcttat 26916466  T
Q  245 gttttagttt 254  Q
    ||||||||||    
T  26916467 gttttagttt 26916476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 29203500 - 29203657
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29203500 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 29203599  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||   ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29203600 aaaaaaatttgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 29203657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 41 - 250
Target Start/End: Complemental strand, 56318285 - 56318075
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||||||||||||||| |||||||||||||||||           ||| ||| ||||||||||||||| |||||||||||||||||||||    
T  56318285 gtcccaaaatataagcaaaaaagacatacttttatcttttccaatatttttttttgtttattatcataaaattaaatgtaaattacattcaattttctct 56318186  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||| |||||    
T  56318185 ctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctataaacctttttccaaagaaaacacaaaaaaccatactctaaatt 56318086  T
Q  240 cttatgtttta 250  Q
    |||||||||||    
T  56318085 cttatgtttta 56318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 41414823 - 41414612
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||| |||||||||||||||||||||||| |||            ||||||| ||||||||||||||||||||||||||||||| |||     
T  41414823 gtcccaaaatataagtaaaaaagacaaacttttatctttttcaagatttttttgt-ttattcttataaaattaaatgcaaattacattcaattttttctc 41414725  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41414724 tctttcattttttc-ataatcaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccatattc 41414626  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  41414625 ttatgttttagttt 41414612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 39078151 - 39078307
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||    
T  39078151 ttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttc-tat 39078249  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39078250 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 39078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 10069691 - 10069848
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||    
T  10069691 ttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctat 10069790  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  10069791 aaaacttttttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttt 10069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 20716174 - 20716331
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  20716174 ttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 20716273  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||| ||||  ||||| ||||||||||||||||||||||||||||||    
T  20716274 aaaactttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttt 20716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 55580663 - 55580821
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||    
T  55580663 ttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttccta 55580762  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    || |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  55580763 tacaactttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttt 55580821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 119 - 254
Target Start/End: Original strand, 7654633 - 7654768
Alignment:
Q  119 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 218  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaaca 7654732  T
Q  219 caaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7654733 caaaaaactatactccaaatttttatgttttagttt 7654768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 16604982 - 16604847
Alignment:
Q  119 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 218  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaaca 16604883  T
Q  219 caaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16604882 caaaaaactatactctaaattcttatgttttagttt 16604847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 24940365 - 24940516
Alignment:
Q  103 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaact 202  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  203 tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  24940465 ttttccaaagaaaatacaaaaaactatactccaaattcttacgttttagttt 24940516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 28669214 - 28669002
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||            |||||||||||||||||||| ||||||||||||||||||||||     
T  28669214 gtcccaaaatataagcaaaaaggacaaatttttatctttttcaagattttttttgtttattctcataaaattaaatacaaattacattcaattttctctc 28669115  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||| ||| |||||||| ||||  ||||||||||||||||||||||||  ||||||    
T  28669114 tctttcattttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaaactatactttaaattc 28669016  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  28669015 ttatgttttagttt 28669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 17794699 - 17794542
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||| |||    
T  17794699 ttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctat 17794600  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||||||||| |||||||||||||| ||||||||| | |||||||||    
T  17794599 aaaatttatttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttt 17794542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 5483436 - 5483279
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  5483436 ttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctat 5483337  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||| ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  5483336 taaacttattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttt 5483279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 35310900 - 35310743
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  35310900 ttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccat 35310801  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||  ||||||||||||||||||||| || |||||||||||||||||||||    
T  35310800 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttt 35310743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 42915523 - 42915681
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||   |    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcca 42915622  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    | |||||| || |||||||||||||||||||||| || ||||||||||| |||||||||    
T  42915623 tgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagttt 42915681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 1585505 - 1585354
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||| ||||||||||| ||||||||||| |||||||   ||    
T  1585505 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccat 1585406  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
     |||||| |||||||||||||||  |||| ||||||||||| ||||||||||||    
T  1585405 gaaacttatttcaaagaaaacac--aaaattatactccaaaatcttatgtttta 1585354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 48793784 - 48793631
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| ||||||| |||||||||| |||||||||||||||||||||||||||  ||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctct--cttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || ||||||||||||  |||||||| || |||||||||||| ||||||||    
T  48793686 gaaacttattccaaagaaaacac--aaaactatgctacaaattcttatgctttagttt 48793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 8683462 - 8683307
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||||| ||   ||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctct--cttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 8683365  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  8683364 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 8683307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 5815474 - 5815598
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||||||  |||||||||||||||||||| |||| | |||||||||||| |||||| |||| |||||| |||||||||||||| ||||||||| |||    
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttattt 5815573  T
Q  208 caaagaaaacacaaaaaactatact 232  Q
    |||||||||||||||||||||||||    
T  5815574 caaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 35529666 - 35529760
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35529666 ttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 8178387 - 8178265
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||| |||||  |||||||||||||||||||||||||||||| ||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatt 8178288  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| ||||||  |||||||    
T  8178287 tcaaagataacacatgaaactat 8178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 52535743 - 52535654
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 186  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||    
T  52535743 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 32203226 - 32203364
Alignment:
Q  109 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttc 208  Q
    ||||||||| || |||||||||||||||||| | ||||||||||| |||||||||       ||||||||||||||| ||||||  ||||||||| ||||    
T  32203226 aattaaatgtaatttacattcaattttctctatgtttcatttttttcataaccaa-------tgaaaattgtttttatatcttcccataaaacttatttc 32203318  T
Q  209 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||  |||||||||||||||  ||||||||||||||||||||    
T  32203319 aaagaaacaacaaaaaactatactttaaattcttatgttttagttt 32203364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 46070668 - 46070553
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||  |||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  46070668 aaaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 46070571  T
Q  207 tcaaagaaaacacaaaaa 224  Q
    ||||||| ||||||||||    
T  46070570 tcaaagacaacacaaaaa 46070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 16473828 - 16473899
Alignment:
Q  183 ttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatattttagttt 16473899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 47516339 - 47516216
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||| |||| | ||||  |||| |||| ||||||||||| || |||||||| | |||||||||||||||||||| ||||| |||||||||| ||    
T  47516339 aaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatt 47516240  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    ||||||| ||||||||||||||||    
T  47516239 tcaaagataacacaaaaaactata 47516216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 5841927 - 5841805
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||| |||||||| | || ||||||| |||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||| || ||    
T  5841927 aaaattcaatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatt 5841828  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  5841827 tcaaggataacacaagaaactat 5841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 19351851 - 19352003
Alignment:
Q  108 aaattaaatgcaaattacattcaatttt-ctctttctttcattttttccataaccaatagccaatgaaaattgttttt-acatcttcttataaaactttt 205  Q
    |||||||||||||||||||||||||||| |||| | || |||| ||| |||||| ||||||||||||||||||||||| ||||||||  || |||||| |    
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttat 19351950  T
Q  206 ttcaaagaaaacac---aaaaaactatactccaa-attcttatgttttagttt 254  Q
    ||||| ||||||||   |||||||||||||||||  || ||||||||||||||    
T  19351951 ttcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttt 19352003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 32323419 - 32323278
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| |||||||||| ||||||| ||||||||||||| |||| |||||| || |||| |||  | |||||||||||||||||||||||||  ||    
T  32323419 ttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccat 32323321  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    ||| ||| ||| |||||||||||||||||| ||||| ||||||    
T  32323320 aaatcttattttaaagaaaacacaaaaaacaatacttcaaatt 32323278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 50080609 - 50080457
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||| ||| ||||||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||| ||||||| ||||| || |||  ||    
T  50080609 ttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggttttatattttcccat 50080510  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
         || |   ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  50080509 -----ttatacaaaagaaaacacaaaaaattatactcaaaattcttatgttttagttt 50080457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 5064803 - 5064656
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||| | |||||||| ||    
T  5064803 aaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatt 5064704  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||||||||||| |||  | ||||||  |||||||||||||    
T  5064703 tcaaagataacacaaaaaattatgttacaaattactatgttttagttt 5064656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 25297380 - 25297286
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||||||||| |||||||||| ||||||||||||||||||  | ||||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  25297380 ttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctt 25297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 161 - 254
Target Start/End: Complemental strand, 21722776 - 21722683
Alignment:
Q  161 caatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||||| |||| ||||||||  ||||||||||||||||||||    
T  21722776 caatagtcaatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttt 21722683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 50145731 - 50145865
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 197  Q
    |||| |||| ||||||||||  ||||||||| ||||||| || |||| |||||| ||||| | |||||||||||||||||||| |||||||||||  |||    
T  50145731 tattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccata 50145830  T
Q  198 aaacttttttcaaagaaaacacaaaaaactatactc 233  Q
    |||||| || ||||| ||||||||| || |||||||    
T  50145831 aaacttattccaaag-aaacacaaacaattatactc 50145865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 14583723 - 14583880
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | |||||||||||||| |||||||||||||||  ||    
T  14583723 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 14583821  T
Q  197 aaaacttttttcaaag-aaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||| |||| |||||||||| |||||||    |||||||||| |||||||||    
T  14583822 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttt 14583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 17186940 - 17186822
Alignment:
Q  100 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaa 199  Q
    ||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  17186940 ttctcataaaattaaatgcaaatta-attcaat---------ctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaa 17186851  T
Q  200 acttttttcaaagaaaacacaaaaaactat 229  Q
    |    |||||||||||| ||||||||||||    
T  17186850 a-aaatttcaaagaaaatacaaaaaactat 17186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 31280193 - 31280329
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| || ||||||||| |||| | |||||||||||||||  ||| ||||| | ||||||| ||||||||||||||||| |||||||||      ||    
T  31280193 ttattctaatgaaattaaatacaaactgcattcaattttctct--cttccatttct-ccataac-aatagccaatgaaaattatttttacat------at 31280282  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||||| || |||||||||||||||||||||||||| |||||||||    
T  31280283 aaaacttattccaaagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 12002793 - 12002634
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| ||||||||||||||||||||||||| |      |||| || ||| |||||||||||| |||||| |||||||||||||||||||   ||    
T  12002793 ttattttcatgaaattaaatgcaaattacattcaatatc-----tcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccat 12002699  T
Q  197 aaaacttttttcaaagaaaa-------cacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||  || |||| ||||       ||||||||||||||||||||||||||||||||||||||    
T  12002698 gaaactaattccaaaaaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttt 12002634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 32280111 - 32280009
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||| ||||||| ||||||||||| |||||||||||||||| |  | || |||| | ||  ||||||||||||||||| ||||||||||||||||||||    
T  32280111 attttctccataatcaatagccaattaaaattgtttttacatatcttcatcaaacctattctaaagaaaacacaaaaaattatactccaaattcttatgt 32280012  T
Q  247 ttt 249  Q
    |||    
T  32280011 ttt 32280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 17799277 - 17799135
Alignment:
Q  112 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaa 211  Q
    |||||||||||| |||| |||||  |||  || ||||||| |||||||| |||| ||||||||||||||||||||||||||  ||||||||  || |||     
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattccaag 17799178  T
Q  212 gaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     | ||||| | ||| ||||||||||||| | || |||||||||    
T  17799177 aagaacaccagaaattatactccaaattatcatattttagttt 17799135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 23978263 - 23978169
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 201  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||||    
T  23978263 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 37911888 - 37912010
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||| ||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||| ||  |||||||||| ||    
T  37911888 aaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttatt 37911987  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    | ||||| |||||||||||||||    
T  37911988 ttaaagataacacaaaaaactat 37912010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 49080261 - 49080379
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | ||||||||||  ||| | |||||||||  |  ||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  49080261 aaaattaaatgcaaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 49080360  T
Q  207 tcaaagaaaacacaaaaaa 225  Q
    ||||||| || ||||||||    
T  49080361 tcaaagataagacaaaaaa 49080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 29511490 - 29511551
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 229  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactat 29511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 32410332 - 32410452
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    ||||||||||||||| |  ||||||||| |||| | ||| ||||| || ||||  || |||| |||||||||| ||||||||||||| |||||||||| |    
T  32410332 aaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagc-aatgaaaattatttttacatcttcctataaaacttat 32410430  T
Q  206 ttcaaagaaaacacaaaaaact 227  Q
    |||||||| |||||||||||||    
T  32410431 ttcaaagataacacaaaaaact 32410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 8013237 - 8013090
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||||||| || |||||| | |  ||| ||||||||||| || || || |||| ||||| |||||||||||||||||||  ||| |||||| ||    
T  8013237 aaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatt 8013138  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  8013137 tcaaggataacacaagaaactatgttacaaactactatgttttagttt 8013090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 28318565 - 28318445
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||||| ||   | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||  || ||    
T  28318565 aaaattaaatgtaaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa--ttatt 28318468  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  28318467 tcaaagataacacaaaaaactat 28318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 28142769 - 28142652
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||||||||   |||| ||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||| || |||||||||| ||    
T  28142769 aaaattaaatgcaaaag-catttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttatt 28142671  T
Q  207 tcaaagaaaacacaaaaaa 225  Q
    | ||||| |||||||||||    
T  28142670 ttaaagataacacaaaaaa 28142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 25268523 - 25268626
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||| ||||||||||||| |||||||||||| ||||||  ||||||| | |||||| ||||||  | ||||||||||  ||||| ||||||| |||| |    
T  25268523 attttctccataaccaataaccaatgaaaattatttttatttcttcttgtgaaacttatttcaagtagaacacaaaaagatataccccaaattattatat 25268622  T
Q  247 ttta 250  Q
    ||||    
T  25268623 ttta 25268626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 40553774 - 40553857
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||||||||||||||| |||||| ||| ||||   ||||| ||| |||||||| |||| ||||||||| |||||||||||||||    
T  40553774 aaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacatctt 40553857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 7654570 - 7654608
Alignment:
Q  46 aaaatataagcaaaaaagacaaacttttatcttttccaa 84  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7654570 aaaatataagcaaaaaagacaaacttttatcttttccaa 7654608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 30012074 - 30011951
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  ||||| ||  ||||| |||||||  | || ||||||| |||||||||||||||||   || |||||| |    
T  30012074 taaaattaaatgcaaattgcattcaatttgttctttttt--attttctccataataattaaccaatgataattgtttttacatctttccatgaaacttat 30011977  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    | |||| | ||||||||||| |||||    
T  30011976 tccaaaaataacacaaaaaattatac 30011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 29203414 - 29203451
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29203414 gtcccaaaatataagcaaaaaagacaaacttttatctt 29203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 53848471 - 53848586
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||| |||||||||| | |||||||||| || | |||||||||||||| |||||||||        |||||||||||||| ||||| ||||||| || ||    
T  53848471 aaaaataaatgcaaagtgcattcaatttgctttctctttcattttttcaataaccaatt-------aaaattgtttttacgtcttcctataaaaattatt 53848563  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  53848564 tcaaggataacacaagaaactat 53848586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 17187027 - 17186992
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  17187027 gtcccaaaatataagcaaaaaagacaaacttttatc 17186992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 16605080 - 16605046
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  16605080 gtcccaaaatataagcaaaaaagacaaacttttat 16605046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 35529578 - 35529612
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  35529578 gtcccaaaatataagcaaaaaagacaaacttttat 35529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 42915436 - 42915470
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  42915436 gtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 32280145 - 32280104
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctc 138  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  32280145 ttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 37872657 - 37872757
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||| |||||||| ||||  ||||||||||| ||||||   |||||||| |||||| ||||||| | ||||||||||  ||||| ||||||| | ||||    
T  37872657 attttctccataactaataatcaatgaaaattattttta---cttcttatgaaacttatttcaaatagaacacaaaaagatataccccaaattatcatgt 37872753  T
Q  247 ttta 250  Q
    ||||    
T  37872754 ttta 37872757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 55580574 - 55580607
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaactttta 74  Q
    ||||||||||||||||||||||||||||||||||    
T  55580574 gtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 5222415 - 5222291
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| |||| |||||  |||   ||| |||||| | |||| || || ||||| | |||||||||||||| || |||| |||||| |    
T  5222415 taaaattaaatgcaaattgcattgaatttgttctcctttttatttttcctataatcattatccaataagaattgtttttacatttttttatgaaacttat 5222316  T
Q  206 ttcaaagaaaacacaaaaaactata 230  Q
    |||||  | ||||||||||| ||||    
T  5222315 ttcaagaagaacacaaaaaattata 5222291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 4058621 - 4058656
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||| |||||||||||||||||||||||||||||||    
T  4058621 gtcctaaaatataagcaaaaaagacaaacttttatc 4058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 7438760 - 7438799
Alignment:
Q  215 aacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttt 7438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 10069603 - 10069638
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||| |||||||||||    
T  10069603 gtcccaaaatataagcaaaaaagaaaaacttttatc 10069638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 39078064 - 39078099
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39078064 gtcccaaaatataagtaaaaaagacaaacttttatc 39078099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 40411104 - 40411199
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 201  Q
    |||||||||||| ||| | ||||||||||  ||| | ||||||||| ||  ||| |||   ||||| |||||||||||||||||||| ||||||||    
T  40411104 taaaattaaatgtaaactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 75
Target Start/End: Complemental strand, 29180606 - 29180576
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||    
T  29180606 caaaatataagcaaaaaagacaaacttttat 29180576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 31532540 - 31532454
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| |||||||||||| |||||| | || ||| |  ||| || ||||||| |||||||||||||| ||||| | ||||||||||||    
T  31532540 caataaaaattgttttttcatcttttcatgaaattaattttaatgaaaacataaaaaactatactctaaattgtaatgttttagttt 31532454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 75
Target Start/End: Complemental strand, 32012521 - 32012491
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||    
T  32012521 caaaatataagcaaaaaagacaaacttttat 32012491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 48793871 - 48793837
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    ||||||||||||||||| |||||||||||||||||    
T  48793871 gtcccaaaatataagcataaaagacaaacttttat 48793837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 10591625 - 10591500
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| |||||||||   |||   ||| |||||||||||||    || ||||||| |||| ||||||||||||   || |||||| |    
T  10591625 taaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 10591526  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    | ||| || ||||||||||| |||||    
T  10591525 tccaaggagaacacaaaaaattatac 10591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 21722824 - 21722783
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctc 138  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  21722824 ttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 35310983 - 35310954
Alignment:
Q  46 aaaatataagcaaaaaagacaaacttttat 75  Q
    ||||||||||||||||||||||||||||||    
T  35310983 aaaatataagcaaaaaagacaaacttttat 35310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 8683543 - 8683515
Alignment:
Q  47 aaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||    
T  8683543 aaatataagcaaaaaagacaaacttttat 8683515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 38140821 - 38140713
Alignment:
Q  146 cattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatg 245  Q
    ||||||| ||||||| ||||  |||||||||||  ||||||| ||||| || |||||  ||| ||  | ||||||| ||||||||||| ||||| | |||    
T  38140821 catttttgccataacaaataatcaatgaaaatttattttacaccttctgatgaaactaatttaaagtagaacacaagaaactatactcaaaattatcatg 38140722  T
Q  246 ttttagttt 254  Q
     ||||||||    
T  38140721 ctttagttt 38140713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 6e-85; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 7022625 - 7022412
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||||||||||||||||||| |||           |||||||||||||||||||||||||||||||||||||||||||||    
T  7022625 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 7022526  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  7022525 tctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattt 7022426  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  7022425 ttatgttttagttt 7022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 7858466 - 7858679
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||| |||||||||||||     
T  7858466 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattactttcaattttctctc 7858565  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  7858566 tctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaactatactccaaattc 7858665  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  7858666 ttatgttttagttt 7858679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 34890340 - 34890183
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34890340 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34890240 aaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 34890183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 36190766 - 36190923
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36190766 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36190866 aaaacttttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttt 36190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 96 - 254
Target Start/End: Original strand, 26483525 - 26483683
Alignment:
Q  96 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||    
T  26483525 gttattctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctcccta 26483624  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26483625 taaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 26483683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 43216513 - 43216356
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||    
T  43216513 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctat 43216414  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43216413 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 43216356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 31734109 - 31734255
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  31734109 ttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctat 31734208  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31734209 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 15958079 - 15957920
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttct--ttcattttttccataaccaatagccaatgaaaattgtttttacatcttctt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||| | ||| |    
T  15958079 ttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcct 15957980  T
Q  195 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  15957979 ataaaacttttttcaaagaaaacacaataaactatactccaatttcttatattttagttt 15957920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 97 - 249
Target Start/End: Original strand, 28348605 - 28348756
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||    
T  28348605 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacatattcctat 28348703  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 249  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  28348704 aaaactttttccaaagaaaatacaaaatactatactccaaattcttatgtttt 28348756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 41086609 - 41086395
Alignment:
Q  41 gtcccaaaatataagcaaaaaa-gacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||||||||||| |||||||||||||||||| |||            |||||||||||||||||||||||||||||||| ||||||||||    
T  41086609 gtcccaaaatataagcaaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattgaattttctct 41086510  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
     | ||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||||    
T  41086509 ctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaactataattcaaatt 41086410  T
Q  240 cttatgttttagttt 254  Q
     ||||  ||||||||    
T  41086409 tttattatttagttt 41086395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 8107783 - 8107630
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| | || |    
T  8107783 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttat-ccataaccaatagccaatgaaaattgtttttacatcatattgt 8107685  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgtttta 250  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  8107684 aaaacttttttcaaagaaaatacaaaaaaactatactccaaattcttatatttta 8107630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 24892832 - 24892992
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt---ttacatcttct 193  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||   ||| ||| ||     
T  24892832 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcctcc 24892931  T
Q  194 tataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  24892932 tataaaacgttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttt 24892992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 97 - 238
Target Start/End: Original strand, 8711870 - 8712011
Alignment:
Q  97 ttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  8711870 ttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttccta 8711969  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaat 238  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  8711970 taaaactttttccaaa-aaaacacaaaaaactatactccaaat 8712011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 13143758 - 13143904
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  13143758 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctat 13143857  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
     ||||||||||||| |||||||||||||| |||||| ||||||||||    
T  13143858 gaaacttttttcaacgaaaacacaaaaaattatacttcaaattctta 13143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 34158457 - 34158303
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||||||| ||||||||||||||||||||||||| |||    
T  34158457 ttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctat 34158358  T
Q  197 aaaactt-ttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  34158357 aaaacttttttttaaagaaaacacaacaaactatactccagattcttatgtttta 34158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 35456190 - 35456038
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||  |||    
T  35456190 ttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctat 35456091  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    |||||| |||||||| |||||| ||||||||||||| |||||||||||||||||    
T  35456090 aaaact-ttttcaaaaaaaacataaaaaactatacttcaaattcttatgtttta 35456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 111 - 254
Target Start/End: Complemental strand, 30575987 - 30575843
Alignment:
Q  111 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat-aaaacttttttca 209  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||| |    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttttttta 30575888  T
Q  210 aagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  30575887 aagaaaacacaaaaaactttactccaaatttttatgttttagttt 30575843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 119 - 254
Target Start/End: Original strand, 35525603 - 35525736
Alignment:
Q  119 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 218  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaaca 35525702  T
Q  219 caaaaaactatactccaaattcttatgttttagttt 254  Q
    |  |||||||||||| ||||||||||||||||||||    
T  35525703 c--aaaactatactctaaattcttatgttttagttt 35525736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 8709950 - 8709795
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||  ||||| ||||||||  |||| ||||||||| ||||||||| |||||  ||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctct--cttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8709852 gagacttatttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 8709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 13144073 - 13143954
Alignment:
Q  135 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt-caaagaaaacacaaaaaactatactc 233  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13144073 tctctctctttcattttt-ccataaccaataactaatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactc 13143975  T
Q  234 caaattcttatgttttagttt 254  Q
    |||||||||||||||||||||    
T  13143974 caaattcttatgttttagttt 13143954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 29920434 - 29920277
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| | ||||||||||||||||| || ||||  ||||| ||||||| ||||||||||||||||||||||||||||||||  ||    
T  29920434 ttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccat 29920335  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||| ||||||||||| | |||| |||||||||||||||||||||    
T  29920334 gaaacttattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttt 29920277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 7499720 - 7499818
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-ttttttccataaccaatagccaatgaaaattgtttttacatcttctt 194  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7499720 ttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttctt 7499818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 16879558 - 16879401
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| || ||||||||| |||| ||||||||||||||||| |||||||||||  |||||| |||||| |||| |||||||||||||||| |||  ||    
T  16879558 ttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcccat 16879459  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     ||| || ||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  16879458 gaaatttatttcaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 16879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 15824797 - 15824646
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||| |||||||| ||||||||||||||      |||||||||||||||||   ||    
T  15824797 ttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagcc------aattgtttttacatctttccat 15824704  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  15824703 gaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 15824646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 4047060 - 4046912
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||| ||   ||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  197 aaaacttttttcaaagaaaacaca-aaaaactatactccaaattcttat 244  Q
     |||||| ||  |||||||||||| ||||||||| || |||||||||||    
T  4046960 gaaacttattataaagaaaacacacaaaaactatgctacaaattcttat 4046912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 3642130 - 3642041
Alignment:
Q  102 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 192  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttc 3642041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 8673385 - 8673507
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| |||||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatt 8673484  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||| | |||||||||||||||    
T  8673485 tcaaatataacacaaaaaactat 8673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 2052830 - 2052938
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||||||||||||||  |||  ||||| ||| || |||||||||||||||||||||||||||||||||  ||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctct--cttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  197 aaaactttttt 207  Q
    |||||||||||    
T  2052928 aaaactttttt 2052938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 17713227 - 17713374
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||| | |||| |||| ||||||||| |||||||||| ||||||||||||||||||| |||||| |||||||||| ||    
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatt 17713326  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  17713327 tcaaggataacacaagaaactatgttgcaaaatactatgttttagttt 17713374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 16358240 - 16358125
Alignment:
Q  134 ttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactc 233  Q
    |||||| ||||||||||||| ||||| |||||| |||||||||||| |||||||||||| ||| |||| |||||||||||||||| |||||||||||||     
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaac-tttttcaaagaaaacaaaaaaaactatactt 16358142  T
Q  234 caaattcttatgtttta 250  Q
    |||||| |||| |||||    
T  16358141 caaatttttatatttta 16358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 26954548 - 26954441
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||| ||| || | ||||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  26954548 aaaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 26954449  T
Q  207 tcaaagaa 214  Q
    ||||||||    
T  26954448 tcaaagaa 26954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 41362463 - 41362316
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||| ||||| |||  | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  41362463 aaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 41362364  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  41362363 tcaaagataacacaaaaaactatgttacaaactactatgttttagttt 41362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 38072169 - 38072314
Alignment:
Q  109 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttc 208  Q
    |||||||| |||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||| || |||||||||||  |||    
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattc 38072268  T
Q  209 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| |||||||||||||||  | |||| |  |||||||||||||    
T  38072269 aaagataacacaaaaaactatgttacaaactactatgttttagttt 38072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 2628320 - 2628198
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||| |||||||| |  ||||||||| |||| ||||||||||| || |||| ||||| |||||||||||| ||||||||||||| |||||||||| ||    
T  2628320 aaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 2628221  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    | || || ||||||| |||||||    
T  2628220 ttaaggataacacaagaaactat 2628198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 25195202 - 25195085
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||| || ||    
T  25195202 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatt 25195104  T
Q  207 tcaaagaaaacacaaaaaa 225  Q
    ||||||| |||||||||||    
T  25195103 tcaaagataacacaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 8745587 - 8745734
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| ||  || ||||| ||||  |||| |||||||| |||| ||| | |||||||||||||||||||||||||| |||||||||| ||    
T  8745587 aaaattaaatgcaaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 8745686  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||  | ||||||| |||||||  | |||| |  |||||||||||||    
T  8745687 tcaagaataacacaagaaactatgttgcaaactactatgttttagttt 8745734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 17336746 - 17336868
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||  || |||| |||   |||||||||||||||||||||||||| ||||||| || ||    
T  17336746 aaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatt 17336845  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||||||  ||||||||||||||    
T  17336846 tcaaagatgacacaaaaaactat 17336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 4039037 - 4038920
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||| |||||||||| ||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatt 4038938  T
Q  207 tcaaagaaaacacaaaaa 224  Q
    ||||| | ||||||||||    
T  4038937 tcaaaaataacacaaaaa 4038920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 41755920 - 41756033
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| |||||  ||||||| ||| ||||||||| ||  |||    
T  41755920 ttattatcatgaaattaaatgtaaattacattcaattttttctctctttca-tttttccataagcaataatcaatgaacattatttttacatttttctat 41756018  T
Q  197 aaaacttttttcaaa 211  Q
    |||| || |||||||    
T  41756019 aaaatttatttcaaa 41756033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 254
Target Start/End: Complemental strand, 44663953 - 44663801
Alignment:
Q  99 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 198  Q
    |||||| | |||||||| |||||| | |||||| ||| ||  | ||||||||| ||| ||| ||||||||||| |||||| ||||||||||||   ||||    
T  44663953 attctcgtgaaattaaacgcaaatcatattcaactttatccgtttttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataa 44663854  T
Q  199 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    || || || ||||||||||||   ||||||||||| ||||||||||  ||||||||    
T  44663853 aatttattccaaagaaaacac---aaactatactctaaattcttataatttagttt 44663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 5217397 - 5217517
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||||||||| || |||||| | | || | ||||||||||| || ||||| |||| ||||| |||||||||||||||||||  ||| |||||| |||    
T  5217397 aaattaaatgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttattt 5217496  T
Q  208 caaagaaaacacaaaaaacta 228  Q
    ||| || ||||||| ||||||    
T  5217497 caaggataacacaagaaacta 5217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 27819663 - 27819810
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| |||||| ||||| ||||  |||| ||||| || ||||||||||  |||| |||| ||||||||||||||  |||||||||| ||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaacttatt 27819762  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |  | || || |||| |||||||  | |||| | ||||||||||||||    
T  27819763 tgtaggataatacaagaaactatgttacaaactattatgttttagttt 27819810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 4480841 - 4480911
Alignment:
Q  169 aatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    |||||||||| |||||||||||||  ||||||||| ||| ||||| |||||||||| ||||||||||||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctatactccaaatt 4480911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 28497253 - 28497172
Alignment:
Q  148 ttttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 229  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactat 28497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 13144127 - 13144085
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctct 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  13144127 ttattttcataaaattaaatgcaaattacattcaattttctct 13144085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 14693434 - 14693484
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 218  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaatttatttcaaagataaca 14693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 6401679 - 6401756
Alignment:
Q  162 aatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    |||| |||||| |||||||||||||||||| |||  |||||| ||||||  | |||||||||||||||||| ||||||    
T  6401679 aataaccaatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaatt 6401756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 33563681 - 33563558
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaata--gccaatgaaaattgtttttacatcttc 192  Q
    |||||||||| |||||||| | |||||||||||||| | |||| ||||   |||||| | ||||||||| |  | |||||||||||||||||||||||||    
T  33563681 ttattctcatgaaattaaacgtaaattacattcaatctcctctctcttctccattttctgcataaccaaaatggtcaatgaaaattgtttttacatcttc 33563582  T
Q  193 ttataaaacttttttcaaagaaaa 216  Q
      ||||||||| ||| ||| ||||    
T  33563581 ccataaaacttatttaaaaaaaaa 33563558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 34713532 - 34713657
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| ||||||||||||  || ||||||| |    
T  34713532 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctagaaaacttat 34713631  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    |||||  ||||||||||||| |||||    
T  34713632 ttcaagaaaaacacaaaaaattatac 34713657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 34890427 - 34890390
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34890427 gtcccaaaatataagcaaaaaagacaaacttttatctt 34890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 7670749 - 7670813
Alignment:
Q  112 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaa 176  Q
    |||||| ||||||||||||||||||||| | || |||||| |||||||| |||||| ||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 17314834 - 17314981
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||| |||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||||||| |||||||| ||| ||| ||| || ||    
T  17314834 aaaattaaatccaaagtgcattcaatttgctctccttttcattttctctataatcaactaccaatgaaaattgcttttacattttcgtatgaaatttatt 17314933  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||  ||||||||| ||||  | |||| |  |||||||||||||    
T  17314934 tcaaagatgacacaaaaagctatgttacaaactactatgttttagttt 17314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 4047147 - 4047113
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  4047147 gtcccaaaatataagcaaaaaagacaaacttttat 4047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 8712577 - 8712675
Alignment:
Q  156 ataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| |||| ||||| |||||||||||||||||||  |||||||||| || |||  | ||||||| |||||| ||| ||| ||  |||||||||||||    
T  8712577 ataactaataaccaataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaactaaactgcaagttactatgttttagttt 8712675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 14576301 - 14576244
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 164  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaat 14576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 24892748 - 24892780
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||||||||||||    
T  24892748 ccaaaatataagcaaaaaagacaaacttttatc 24892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 29147393 - 29147297
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 203  Q
    ||||||||||||||| | |||| |||||  |||   ||||||||| || |||| ||| | | |||||||||||||||| ||||||||||| ||||||    
T  29147393 aaaattaaatgcaaactgcatttaatttgatctccatttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaactt 29147297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 2052955 - 2053014
Alignment:
Q  195 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||| ||  ||||||||||||||||| |||||| | |||| ||||||||||||||    
T  2052955 ataaaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttt 2053014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 13143671 - 13143706
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||| |||||||||||    
T  13143671 gtcccaaaatataagcaaaaaagataaacttttatc 13143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 76
Target Start/End: Complemental strand, 13144210 - 13144179
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||    
T  13144210 caaaatataagcaaaaaagacaaacttttatc 13144179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 30576080 - 30576045
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||||||| |||||||    
T  30576080 gtcccaaaatataagcaaaaaagacaaatttttatc 30576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 35525505 - 35525540
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||| ||||||||||||||||||||    
T  35525505 gtcccaaaatataagtaaaaaagacaaacttttatc 35525540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 36190678 - 36190713
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||||| |||||||||    
T  36190678 gtcccaaaatataagcaaaaaagacacacttttatc 36190713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 40773499 - 40773412
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| |||||| ||||||||||||||  |||||||| ||   |  |||||||| |||| ||||||||||||| |||| |||||||||    
T  40773499 ccaataaaaattatttttacatcttctgttaaaacttattcttagaaaaacacacaaaattatactccaaattgttatattttagttt 40773412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 45190700 - 45190735
Alignment:
Q  219 caaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttt 45190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 36537990 - 36538020
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||    
T  36537990 caaaatataagcaaaaaagacaaacttttat 36538020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 75
Target Start/End: Complemental strand, 41809052 - 41809022
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||    
T  41809052 caaaatataagcaaaaaagacaaacttttat 41809022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 374162 - 374103
Alignment:
Q  121 attacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt 182  Q
    ||||||||||||||| | ||||||||||||| ||||||| |||||| |||| ||||||||||    
T  374162 attacattcaatttttt-tttctttcattttctccataatcaatagacaat-aaaattgttt 374103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 3225617 - 3225529
Alignment:
Q  169 aatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaa--act-atactccaaattcttatgttttagttt 254  Q
    |||| ||||| ||||||||| |||| || |||||| |||||| ||||||| |||||  ||| |||||||| ||| ||||||||||||||    
T  3225617 aatgcaaattatttttacatattctcatgaaacttatttcaaggaaaacataaaaagtacttatactccagattattatgttttagttt 3225529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 7499817 - 7499866
Alignment:
Q  205 tttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||| ||||||  ||||||| |||||| |||||||||||||    
T  7499817 tttcaaagaaaacgcaaaaagttatactctaaattcctatgttttagttt 7499866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 11158675 - 11158712
Alignment:
Q  217 cacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttt 11158712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 24510848 - 24510735
Alignment:
Q  110 attaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttca 209  Q
    |||||||||||||| ||||||||||  |||   ||| ||| | ||||||| || || ||||| |||||||||||||||||||   || |||||| || ||    
T  24510848 attaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaataaaaattgtttttacatctttccatgaaacttattcca 24510749  T
Q  210 aagaaaacacaaaa 223  Q
    |  |||||||||||    
T  24510748 ataaaaacacaaaa 24510735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 31133186 - 31133101
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||||||||||||||||| ||||||||||| |||   ||| ||||| |||||||    || ||||||| |||| ||||||||||||    
T  31133186 taaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 31133101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 6e-85; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 14805810 - 14806022
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  14805810 gtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 14805909  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  14805910 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac-tttttcaaagaaaatacaaaaaactatactccaaattc 14806008  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  14806009 ttatgttttagttt 14806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 15252804 - 15253016
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  15252804 gtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 15252903  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  15252904 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac-tttttcaaagaaaatacaaaaaactatactccaaattc 15253002  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  15253003 ttatgttttagttt 15253016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 46760478 - 46760264
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctct 139  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||| |          ||||||||||||||||||||||||||||||||||||| ||||||    
T  46760478 gtcccaaaatataagtaaaaaagacaaacttttatttttttcaatattttttttttgttattctcataaaattaaatgcaaattacattcaatattctct 46760379  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46760378 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 46760279  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  46760278 cttatgttttagttt 46760264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 25737847 - 25737634
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||| | |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  25737847 gtcccaaaatataagcaaaaaaaaaaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 25737748  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||     
T  25737747 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacacaaaactataccccaaattt 25737648  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  25737647 ttatgttttagttt 25737634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 18102469 - 18102683
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||||||||||||||||||||||||||||| |||           ||| |||||||||||||||||||||||||||||||||||||| ||    
T  18102469 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttcact 18102568  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  18102569 ctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 18102668  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  18102669 cttatgttttagttt 18102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 42 - 254
Target Start/End: Complemental strand, 19912988 - 19912776
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctcttt 141  Q
    |||||||||||||  ||||||||||||||||||||||||||||           ||||||||||| ||||||||||||||||||||||||||||||||||    
T  19912988 tcccaaaatataaataaaaaagacaaacttttatcttttccaagatttttttttgttattctcatgaaattaaatgcaaattacattcaattttctcttt 19912889  T
Q  142 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 241  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19912888 ctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttccaaagaaaacacaaaaaactatactccaaattct 19912789  T
Q  242 tatgttttagttt 254  Q
    |||||||||||||    
T  19912788 tatgttttagttt 19912776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 45485893 - 45486108
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnn--gttattctcataaaattaaatgcaaattacattcaattttctc 138  Q
    |||| ||||||||||||||||||||||| |||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||    
T  45485893 gtccaaaaatataagcaaaaaagacaaaattttatcttttccaatttttttttttttgttattctcataaaattaaatgcaaattacattcaattttctc 45485992  T
Q  139 tttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaat 238  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  45485993 tttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaat 45486092  T
Q  239 tcttatgttttagttt 254  Q
    | ||||||||||||||    
T  45486093 ttttatgttttagttt 45486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 35923192 - 35923404
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||  |||||||| ||||||||||||||| |||           |||||||||||||||||||||||||||||||||||||||||||||    
T  35923192 gtcccaaaatataataaaaaaagataaacttttatctttttcaatatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 35923291  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||     
T  35923292 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacac-aaaaactatactccaaattt 35923390  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  35923391 ttatgttttagttt 35923404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 6191041 - 6191198
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  6191041 ttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6191140  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6191141 aaaacttttttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 6191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 20123844 - 20123691
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  20123844 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctat 20123745  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  20123744 aaaactttttccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 25944572 - 25944729
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  25944572 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 25944671  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||    
T  25944672 aaaactttttccaaagaaaacacaaaaacttatactccaaattcttatattttagttt 25944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 4910797 - 4910642
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||    
T  4910797 ttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctat 4910698  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||    
T  4910697 aaaactttttctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttt 4910642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 47779600 - 47779757
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||  ||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||  ||||||||||||||||||||| || |||||||||||| ||||||||    
T  47779700 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 47779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 22632085 - 22632242
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  22632085 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccat 22632184  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| |||||||||||||||||||| |||| || |||| | ||||| ||||||||    
T  22632185 gaaacttatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttt 22632242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 47557765 - 47557622
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||| |||    
T  47557765 ttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctat 47557666  T
Q  197 aaaactttttt--caaagaaaacacaaaaaactatactccaaat 238  Q
    |||  ||||||   ||| ||||||||||||||||||||||||||    
T  47557665 aaattttttttaaaaaaaaaaacacaaaaaactatactccaaat 47557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 12632470 - 12632355
Alignment:
Q  135 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 234  Q
    ||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  12632470 tctctctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactcc 12632371  T
Q  235 aaattcttatgtttta 250  Q
    ||||||||||||||||    
T  12632370 aaattcttatgtttta 12632355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 11780014 - 11780170
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| | |||||  ||||| ||||| ||||| |||||||||||||  ||    
T  11780014 ttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatg-aaattatttttacatcttccaat 11780112  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||| ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  11780113 aaaatttattttaaagaaaacacgaaaaactatattccaaattcttatattttagttt 11780170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 14574560 - 14574717
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | |||||||||||| ||||| ||||| |||||||||||||  ||    
T  14574560 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccat 14574659  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||    
T  14574660 gaaacttattatcaagaaaacacaaaaaactatactccaaattcttatattttggttt 14574717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 44682874 - 44683030
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||| |||||||||||| ||||||||| | |||||||||| | ||||||||||||| |||||||||||||||||||||||||  ||    
T  44682874 ttattctcatgaaattaattgcaaattacatccaattttctatatctttcatttct-ccataaccaatagtcaatgaaaattgtttttacatcttcgcat 44682972  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||| ||||||||||| | |||||||||||||||||| || ||||||    
T  44682973 caaacttattccaaaaaaaacacaaaatattatactccaaattcttattttctagttt 44683030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 9158086 - 9158204
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| ||||||||||||||||||||||||||| ||| | | |||||||||||||| ||||||||| ||||| ||||||||||||||||||||| |||    
T  9158086 ttattcttataaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctat 9158184  T
Q  197 aaaacttttttcaaagaaaa 216  Q
    ||||||||||| ||| ||||    
T  9158185 aaaactttttttaaaaaaaa 9158204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 15995715 - 15995873
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | ||||||||||| |||||| ||||| ||||||||||||   ||    
T  15995715 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccat 15995814  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||   |||||||||| ||||||||||||||||||||||||| |||| ||||    
T  15995815 gaaacttattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttt 15995873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 2610732 - 2610586
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctt-tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||||| ||||||| |||||||||||||||||||| |||| |||| |||||| |||||||||||||||||| ||||| ||||||||||||||  ||    
T  2610732 ttattctcatgaaattaagtgcaaattacattcaatttt-tcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttcta 2610634  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||  || || ||||| || | ||||||| |||||||||||||||||    
T  2610633 taaattttattccaaaggaagcgcaaaaaaatatactccaaattctta 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 48413723 - 48413866
Alignment:
Q  103 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaact 202  Q
    |||| ||||||||||||||||| ||||||||||||||  |||  ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctct--cttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaact 48413819  T
Q  203 tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    | ||   || |||||||  |||| ||||||||||||||||||||| ||||||    
T  48413820 tatt---aaaaaaacac--aaaattatactccaaattcttatgttgtagttt 48413866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 35068999 - 35068872
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||| ||||||||||||||||||||||||              |||| || |||||||||||| ||| |||||||||||||||||||| |||    
T  35068999 ttattctcataatattaaatgcaaattacattcaatt--------------ttttctctataaccaatagctaattaaaattgtttttacatcttcctat 35068914  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaa 237  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  35068913 aaaacttttttcaaagaaaacacaaaaaaactatattccaaa 35068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 39170540 - 39170662
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || |||| ||||  | |||||||||||||||||||||||| |||||||||| ||    
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatt 39170639  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  39170640 tcaaggataacacaataaactat 39170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 96 - 255
Target Start/End: Complemental strand, 4237880 - 4237720
Alignment:
Q  96 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||| |||||||||||||||||||| |||||||| | | | |||| |||||| | | ||| ||||||||||| |||||| |||||||||||||| |    
T  4237880 gttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttctca 4237781  T
Q  196 taaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagtttg 255  Q
    | ||| || ||||||| |||| || ||||||||||| |  |||||||||| ||||| ||||    
T  4237780 tgaaagttatttcaaaaaaaatacaaaaaaactatattttaaattcttatattttactttg 4237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 16917468 - 16917620
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| | |  ||||||  | |||||||||||  ||||||||||||||||||||||||  ||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcac-ataaccaatagttaatgaaaattgtttttacatcttcccat 16917566  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
     |||||| || ||||||||| ||||||   |||| | |||||| ||||||||||    
T  16917567 gaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgtttta 16917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 12633207 - 12633110
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctc 138  Q
    |||||||||||||| ||||| |||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||    
T  12633207 gtcccaaaatataatcaaaatagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 27810898 - 27810803
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttct 193  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||| |||||| |  |||| ||||| ||||| |||||||||||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttct 27810803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 38260322 - 38260445
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||| ||||| |||| ||||||||||| || ||||  |||| |||||||||||| |||||||| |||  |||||||||| ||    
T  38260322 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    ||||  | ||||||||||||||||    
T  38260422 tcaagaataacacaaaaaactata 38260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 31550042 - 31549936
Alignment:
Q  122 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa 221  Q
    |||||||||||||||| |||||  | ||||| ||||||||||| | |||||||| |||||||||||||||| ||||||| || ||  ||||||||| |||    
T  31550042 ttacattcaattttctttttctcccctttttcccataaccaattgtcaatgaaagttgtttttacatcttcctataaaatttattctaaagaaaacgcaa 31549943  T
Q  222 aaaacta 228  Q
    |||||||    
T  31549942 aaaacta 31549936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 31769116 - 31768994
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||   ||| ||||| || |||| |||    ||||||||||||||||||||||||| |||||||||| ||    
T  31769116 aaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 31769017  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||||||  ||||||||||||||    
T  31769016 tcaaagatgacacaaaaaactat 31768994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 8015813 - 8015732
Alignment:
Q  119 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaact 202  Q
    ||||| |||||||||||||||  ||| ||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  8015813 aaattgcattcaattttctct--cttgcattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaact 8015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 106 - 254
Target Start/End: Complemental strand, 35084215 - 35084067
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| |||| |||||  |||   ||||||||| ||||||| || || ||||| | ||||||||||||||||| |||| |||||| |    
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttat 35084116  T
Q  206 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||  | ||||||||||||||||   ||||||  | |||||||||||    
T  35084115 ttcaagaagaacacaaaaaactataactcaaattactgtgttttagttt 35084067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 24151734 - 24151640
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 203  Q
    |||||| ||||||| |||||||||||| |||| |||||| |||| || ||||||||||  || |||||||||||||||||||||| ||||||||||    
T  24151734 aaattacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaactt 24151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 35888123 - 35887976
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||| ||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   | |||||||||||||||||||||||| ||||||| || ||    
T  35888123 aaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatt 35888024  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||||||||||| |||  | |||| |  |||||||||||||    
T  35888023 tcaaagataacacaaaaaattatgttacaaactactatgttttagttt 35887976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 4069043 - 4069109
Alignment:
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    |||| |||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  4069043 tcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaactttttt 4069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 254
Target Start/End: Complemental strand, 37767172 - 37767026
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||| |||||||| |||| |||||  |||  || |||||||||| ||| | ||||    |||||||||||||||| || |||  || ||| |  |||    
T  37767172 aaattaagtgcaaattgcatttaatttgttctccctctcattttttctatagcaaataattgatgaaaattgtttttatatgttcccatgaaattagttt 37767073  T
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     ||||||||||||||||||||||||||||||| | ||||||||||||    
T  37767072 taaagaaaacacaaaaaactatactccaaattatcatgttttagttt 37767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 254
Target Start/End: Original strand, 33153039 - 33153187
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttc-attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 204  Q
    |||||||||||||||||| ||||||||||  |||  ||||| ||||| ||||||| || || ||||| | |||||||||||||||||   |||||| ||     
T  33153039 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaattta 33153137  T
Q  205 tttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||  | ||||||||||| |||||| |||| | ||||||||| ||||    
T  33153138 tttcaagaagaacacaaaaaattatacttcaaactattatgtttttgttt 33153187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 25944485 - 25944522
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25944485 gtcccaaaatataagcaaaaaagacaaacttttatctt 25944522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 16562688 - 16562778
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnnngttattctcataaaattaaatgcaaattacattca 130  Q
    ||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||||||||||||||||| ||||    
T  16562688 gtcccaaaatataagtaaaaaagacaaatttttatcttttccaattttttttttttgttattctcataaaattaaatgcaaattactttca 16562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 16602974 - 16602884
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnnngttattctcataaaattaaatgcaaattacattca 130  Q
    ||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||||||||||||||||| ||||    
T  16602974 gtcccaaaatataagtaaaaaagacaaatttttatcttttccaattttttttttttgttattctcataaaattaaatgcaaattactttca 16602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 19492559 - 19492400
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||| ||| ||||||||| ||||||| |||||||||||| | ||||  ||||| ||||||||||| || | || |||||||||||| ||| ||   ||    
T  19492559 ttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttttgcatattaccat 19492460  T
Q  197 aa--aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |  || ||| || ||| |||| |||||||  ||||||| ||||| ||||||||||||||    
T  19492459 gatgaaatttattaaaaaaaaatacaaaaagttatactctaaatttttatgttttagttt 19492400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 254
Target Start/End: Original strand, 40560382 - 40560530
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || ||||||| |||| ||||||||||||  |||||||||| |    
T  40560382 taaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctataaaacttat 40560481  T
Q  206 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| || ||||||||||| |||||  |||||| ||| || |||||||    
T  40560482 ttcaaggagaacacaaaaaattatacctcaaattattaagtgttagttt 40560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 10248594 - 10248657
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa-aaaactat 229  Q
    |||||||||||||||||||||||||  |||||||||| |||||| || ||||||| ||||||||    
T  10248594 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactat 10248657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 21654235 - 21654116
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||||||||||||||  |||   ||||||||| |||||||    || ||||||| |||| ||||||||||||   || |||||| |    
T  21654235 taaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 21654136  T
Q  206 ttcaaagaaaacacaaaaaa 225  Q
    | ||| || |||||||||||    
T  21654135 tccaaggagaacacaaaaaa 21654116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 47557967 - 47557928
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctttt 80  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  47557967 gtcccaaaatataagcaaaaaagacaaacttttatgtttt 47557928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 3777984 - 3778106
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || |||||||||   ||||||||||| |||||| || ||| |  |||| || ||    
T  3777984 aaaattaaatgaaaagtgcattcaatttgctttctctttcattttctcaataaccaatgatcaatgaaaattatttttatattttcctggaaaaattatt 3778083  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  3778084 tcaaggataacacaataaactat 3778106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 29713196 - 29713325
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||||||||||||| ||| | | | | || ||||||||||| || ||||  |||| ||||||||||||||||||||| |||  ||| ||| || ||     
T  29713196 aaattaaatgcaaattatatttattataccctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattc 29713295  T
Q  208 caaagaaaacacaaaaaactatactccaaa 237  Q
     |||||  |||||| |||||||||| ||||    
T  29713296 taaagatgacacaagaaactatactacaaa 29713325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 30082353 - 30082470
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  ||| | ||  ||| | ||||||| || || ||||| | ||||||||||||||||| | | ||||||| |    
T  30082353 taaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacatcttttcagaaaacttat 30082452  T
Q  206 ttcaaagaaaacacaaaa 223  Q
    |||||  | |||||||||    
T  30082453 ttcaagaataacacaaaa 30082470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 4068972 - 4069020
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaa-ttttctctttcttt 145  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4068972 tattctcatgaaattaaatacaaattacattcaatttttctctttcttt 4069020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 22369233 - 22369313
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 188  Q
    ||||||||||||| || |||||| | | |||| ||||||||||| || ||||| |||| ||||| |||||| |||||||||    
T  22369233 aaattaaatgcaatttgcattcattatgctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 39174193 - 39174229
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatctttt 80  Q
    |||||||||||| ||||||||||||||||||||||||    
T  39174193 ccaaaatataagtaaaaaagacaaacttttatctttt 39174229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 33092792 - 33092669
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaa-ttgtttttacatcttcttataaaacttttt 206  Q
    |||||||||||||| | |||||| | | ||||| ||||||||||  | ||||| |||| ||||| |||| |||||||||||| ||  ||| |||||| ||    
T  33092792 aaattaaatgcaaaatgcattcattatgctcttcctttcattttcactataactaataaccaataaaaaattgtttttacatttttctatgaaacttatt 33092693  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    | || || ||||||| ||||||||    
T  33092692 ttaatgataacacaagaaactata 33092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 18800953 - 18800919
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||| ||||||||    
T  18800953 gtcccaaaatataagcaaaaaagacatacttttat 18800919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 31280592 - 31280546
Alignment:
Q  198 aaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    |||||| |||||||||||  |||||| ||||||||||||||||||||    
T  31280592 aaacttatttcaaagaaattacaaaatactatactccaaattcttat 31280546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 47778681 - 47778715
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||| ||||||    
T  47778681 gtcccaaaatataagcaaaaaagacaaatttttat 47778715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 3157436 - 3157561
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    ||||||||||||||| || ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| ||||||||||||   || |||||| |    
T  3157436 taaaattaaatgcaagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 3157535  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    |||||||| ||||||||||| |||||    
T  3157536 ttcaaagagaacacaaaaaattatac 3157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 9158000 - 9158033
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttat 75  Q
    ||||||||||||| ||||||||||||||||||||    
T  9158000 tcccaaaatataatcaaaaaagacaaacttttat 9158033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 41890356 - 41890303
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataa 159  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    
T  41890356 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataa 41890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 44682784 - 44682816
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||| |||||||||||||||||||||||||    
T  44682784 ccaaaatgtaagcaaaaaagacaaacttttatc 44682816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 6e-85; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 21542358 - 21542571
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||| |||||||||||||||||||||||||||| ||    
T  21542358 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttt 21542457  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21542458 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattc 21542557  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  21542558 ttatgttttagttt 21542571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 35129276 - 35129062
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||| ||||||||||||||||||||||||||||||||           ||||||||| |||||||||||||||||||||||||||||||||||    
T  35129276 gtcccaaaatacaagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcgtaaaattaaatgcaaattacattcaattttctctt 35129177  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgttt-ttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35129176 tctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 35129077  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  35129076 cttatgttttagttt 35129062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 96 - 254
Target Start/End: Complemental strand, 11082411 - 11082253
Alignment:
Q  96 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  11082411 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctcccta 11082312  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11082311 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 11082253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 3095942 - 3095728
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnn--gttattctcataaaattaaatgcaaattacattcaattttctc 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||    
T  3095942 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttttgttattctcataaaattaaatgcaaattacattcaattttctc 3095843  T
Q  139 tttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaat 238  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  3095842 tttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaac-ttttccaaagaaaacacaaaaaactatactccaaat 3095744  T
Q  239 tcttatgttttagttt 254  Q
    | ||||| ||||||||    
T  3095743 ttttatgctttagttt 3095728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 44 - 250
Target Start/End: Complemental strand, 34177859 - 34177653
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 143  Q
    |||||||||||| |||||| |||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||| |||||||||    
T  34177859 ccaaaatataagtaaaaaacacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattatctctttct 34177760  T
Q  144 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| ||||||||||||||||||||||| ||||||||||||    
T  34177759 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaatttttttccaaagaaaacacaaaaaactatattccaaattctta 34177660  T
Q  244 tgtttta 250  Q
    |||||||    
T  34177659 tgtttta 34177653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 7275040 - 7274883
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  7275040 ttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccat 7274941  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || ||||||||| |||||||||||| || |||||||||||||||||||||    
T  7274940 gaaacttattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttt 7274883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 12461594 - 12461437
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| |||||||||||||||||||| | ||||  ||||| |||||||||||||||||||||||||||||||||||||||  |||    
T  12461594 ttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctat 12461495  T
Q  197 -aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     ||||||| |||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  12461494 aaaaacttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttt 12461437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 30794357 - 30794200
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| ||||  ||||| ||||| |||||||||||||||||| ||||||||||||||| |||    
T  30794357 ttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctat 30794258  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| || |||| |||||| |||||| |||||| ||||||||||| |||||||||    
T  30794257 aaaacttattccaaataaaacataaaaaattatacttcaaattcttatattttagttt 30794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 31107187 - 31107320
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| |||||||||||||||||||||||||||||| || | |||||||||||||| |||| |||||| |||| |||||  ||||||||| |||||||    
T  31107187 ttattcttataaaattaaatgcaaattacattcaattt-ctttctctttcattttttctataatcaatagtcaataaaaatcatttttacattttcttat 31107285  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatac 231  Q
    |||  ||||||||||||||||||||||||||||||    
T  31107286 aaattttttttcaaagaaaacacaaaaaactatac 31107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 17751909 - 17751756
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| || ||| |||||||||||||||||||||||| ||| |||| |||||| ||||||| |||||||||||||  | ||||||||||| || | |     
T  17751909 ttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacattttttaaa 17751810  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    |||||||  |  |||||||||||||||||||||||||||||||||||| |||||    
T  17751809 aaaacttaatctaaagaaaacacaaaaaactatactccaaattcttatatttta 17751756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 4031991 - 4032113
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||  ||||||||| ||    
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatt 4032090  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  4032091 tcaaagataacacaaaaaactat 4032113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 4987947 - 4988069
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   |||||||||||| ||||||||||||| |||||||||| ||    
T  4987947 aaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 4988046  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  4988047 tcaaagataacacaaaaaactat 4988069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 16524384 - 16524505
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  16524384 aaaattaaatgcaaagtgcattcaatttgttctct-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16524482  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  16524483 tcaaagataacacaaaaaactat 16524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 9428766 - 9428844
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaa 175  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| ||||| |||||||| ||||||||||||||||||||    
T  9428766 ttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 16013583 - 16013465
Alignment:
Q  111 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaa 210  Q
    ||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaa 16013484  T
Q  211 agaaaacacaaaaaactat 229  Q
    ||| || ||||||||||||    
T  16013483 agataatacaaaaaactat 16013465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 3888431 - 3888553
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   || ||||||||||||| ||||||||| |||||||||| ||    
T  3888431 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatt 3888530  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||| | |||||||| ||||||    
T  3888531 tcaaatataacacaaataactat 3888553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 14573293 - 14573136
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||| ||||| |||||||||  |||||| ||| |||||| | || |||  |||||| ||||||| ||| |  ||||||||||| |||||||||| ||  |    
T  14573293 ttatactcatgaaattaaatttaaattatattaaatttttttctctctaccattttctccataatcaacaaacaatgaaaattatttttacatcatccca 14573194  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||| |||| |||||||||||| || ||||| |||||||||||||| ||| |||||||||    
T  14573193 taatacttatttcaaagaaaatac-aaaaattatactccaaattcatatattttagttt 14573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 17598294 - 17598419
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  ||| | ||| ||||| |||||||    || ||||||| |||| ||||||||||||   |||||| || |    
T  17598294 taaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 17598393  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    | |||||| ||||||||||| |||||    
T  17598394 tccaaagagaacacaaaaaattatac 17598419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 9428846 - 9428898
Alignment:
Q  202 ttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||||||||||    
T  9428846 tttttttaaaaaaaacacaaaaaattatacttcaaattcttatgttttagttt 9428898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 21963958 - 21964082
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||| ||||| ||| ||||||  ||| | ||| ||||| ||||| | ||||| ||||| |||||| ||||||||||||   ||||||||| |    
T  21963958 taaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaacttat 21964057  T
Q  206 ttcaaagaaaacacaaaaaactata 230  Q
    || || || ||||||||||| ||||    
T  21964058 tttaaggagaacacaaaaaattata 21964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 5300701 - 5300659
Alignment:
Q  161 caatagccaatgaaaattgtttttacatcttcttataaaactt 203  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  5300701 caataaccaatgaaaattgtttttacatcttcctataaaactt 5300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 16870947 - 16870828
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataac-caatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||| |||||||||||| ||| ||||  |||||||||| |  |||||  |||| ||||| ||| ||| ||||| |||||  ||| |||||| ||    
T  16870947 aaattaaatgaaaattacattcattttgctctccctttcattttctttataactaaataaccaataaaagttgattttaaatctttctatgaaacttatt 16870848  T
Q  207 tcaaagaaaacacaaaaaac 226  Q
    | ||||| ||||||||||||    
T  16870847 ttaaagataacacaaaaaac 16870828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 15830760 - 15830846
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| | ||||||||||| |||  |  ||| | ||||||||||||||    
T  15830760 caatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaaattatgttagaaactattatgttttagttt 15830846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 5822123 - 5822042
Alignment:
Q  173 aaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||||  ||| |||||| || |||||| ||||||| ||| |||||| |||| | | || |||||||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttt 5822042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 5881872 - 5881760
Alignment:
Q  142 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 241  Q
    |||||||||| || ||||  |||| ||||| |||||||||||||||||||  ||| ||||||  | |||||| |||| || ||| |||||| |||| | |    
T  5881872 ctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaacttagtccaaagataacagaagaaattatactgcaaactat 5881773  T
Q  242 tatgttttagttt 254  Q
     || |||||||||    
T  5881772 aatattttagttt 5881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 14709899 - 14709795
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaac-acaaaaaactatactccaaattcttatg 245  Q
    ||||| ||||||| ||||| |||||||||||| ||||||| | ||||| | |||||| ||||||  | ||| | |||||| ||| | ||||||| |||||    
T  14709899 attttctccataatcaataaccaatgaaaattatttttactttttcttgtgaaacttatttcaagtagaacaaaaaaaaaatattcaccaaattattatg 14709800  T
Q  246 tttta 250  Q
    |||||    
T  14709799 tttta 14709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 26540341 - 26540253
Alignment:
Q  105 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttct 193  Q
    |||||||||||||||||||  ||||||||| | || ||| | ||||| |||||| | ||||  |||| |||||||||| ||| ||||||    
T  26540341 ataaaattaaatgcaaattgtattcaatttacactctctctgattttctccatatcaaataatcaataaaaattgtttatacttcttct 26540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 9e-84; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 6686323 - 6686538
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |          ||||||||||||||||||||||||||||||||||||||||||||    
T  6686323 gtcccaaaatataaacaaaaaagataaacttttatcttttccaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctct 6686422  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt-caaagaaaacacaaaaaactatactccaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  6686423 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaat 6686522  T
Q  239 tcttatgttttagttt 254  Q
    ||||||||||||||||    
T  6686523 tcttatgttttagttt 6686538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 11262105 - 11261892
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||| ||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  11262105 gtcccaaaatataagtaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctt 11262006  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  11262005 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaattc 11261906  T
Q  241 ttatgttttagttt 254  Q
    | |||| |||||||    
T  11261905 tcatgtgttagttt 11261892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 44 - 254
Target Start/End: Complemental strand, 43590180 - 43589970
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 143  Q
    ||||||||||||||||||| ||||||||||||||||| |||           ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43590180 ccaaaatataagcaaaaaatacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttct 43590081  T
Q  144 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43590080 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttttcaaaagaaaacacaaaaaactatactccaaattctta 43589981  T
Q  244 tgttttagttt 254  Q
    |||||||||||    
T  43589980 tgttttagttt 43589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 37522811 - 37522597
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaa-ttaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||||||||||||||||||||||||||||||||              ||||||||||||| |||||||||||||||||||||||||||||    
T  37522811 gtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgtctattctcataaaaattaaatgcaaattacattcaattttctct 37522712  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  37522711 gtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactatactccaaatt 37522612  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  37522611 cttatgttttagttt 37522597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 37562983 - 37562769
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||     
T  37562983 gtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctg 37562884  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttc-aaagaaaacacaaaaaactatactccaaatt 239  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||||    
T  37562883 tctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactatactccaaatt 37562784  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  37562783 cttatgttttagttt 37562769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 42273645 - 42273800
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42273645 ttattctcataaaattaaatgcaaattgcattcaattttctct--ctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 42273742  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42273743 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 42273800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 20644010 - 20644167
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20644010 ttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  20644110 aaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 20644167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 34425327 - 34425483
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||| ||| |||    
T  34425327 ttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctat 34425425  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34425426 aaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 34425483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 20039100 - 20039255
Alignment:
Q  99 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 198  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||    
T  20039100 attctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataa 20039199  T
Q  199 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20039200 aacctttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 20039255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 32110998 - 32111144
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||    
T  32110998 ttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctat 32111097  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
     |||||||||||||||||||||||||| | |||||||||||||||||    
T  32111098 gaaacttttttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 38130281 - 38130121
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||    
T  38130281 ttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctat 38130182  T
Q  197 aaaacttttttcaaagaaaacacaaaaa---actatactccaaattcttatgttttagttt 254  Q
    ||||||||||  ||||||||||||||||   |||||| |||||||||||||||||||||||    
T  38130181 aaaactttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttt 38130121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 19413138 - 19413294
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 197  Q
    ||||||||| ||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  198 aaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||  ||||||||    
T  19413238 aaacttatttcaaagaaaacacaaaaaactatgctacaaattcttatactttagttt 19413294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 38280843 - 38280969
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||    
T  38280843 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctat 38280942  T
Q  197 aaaacttttttcaaagaaaacacaaaa 223  Q
    ||||||||||||||||||| |||||||    
T  38280943 aaaacttttttcaaagaaagcacaaaa 38280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 97 - 247
Target Start/End: Original strand, 8225459 - 8225608
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttt-acatcttctta 195  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| || ||||| |||| ||| ||    
T  8225459 ttattctcataaaattaaatgcaaattacgttcaattttctct--ctttcattttttccataaccaatagccaatgaaattttttttttacattttccta 8225556  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtt 247  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||    
T  8225557 taaaactttttccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 25840860 - 25841017
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| | |||||||||||||||||||||||||  ||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccat 25840959  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||||||||||| || |||||| ||||| ||||||||    
T  25840960 gaaacttattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttt 25841017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 12912449 - 12912303
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||| ||||| |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 12912350  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| |||||||||||||||| ||||| | | |||||||||||||    
T  12912349 tcaaagataacacaaaaaactatattccaactac-tatgttttagttt 12912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 43454484 - 43454335
Alignment:
Q  101 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaa 200  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| | | ||||||||||  |||||||||||||||||||| ||| |||||||    
T  43454484 tctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctataaaa 43454385  T
Q  201 cttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||| |  ||||||||||||||||||||||| | ||| |||||||||||||    
T  43454384 cttatgacaaagaaaacacaaaaaactatatttcaagttcttatgtttta 43454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 39505397 - 39505250
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||| ||||||| ||| ||||||||||||||||||||||||||   ||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttt-ccataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  197 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttat 244  Q
    ||||||| || |||||||||||||| |||||||| || |||||||||||    
T  39505298 aaaacttattccaaagaaaacacaaaaaaactatgctacaaattcttat 39505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 4463356 - 4463511
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||| ||||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||    
T  4463356 ttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccat 4463455  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     || ||| || ||||||||||||  | ||| || || |||||||||||| ||||||||    
T  4463456 gaagcttattccaaagaaaacac--acaaccatgctacaaattcttatgctttagttt 4463511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 17351384 - 17351541
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||| ||||||||||||||||||||| | | ||||||| ||||||| ||||||||||| |||||||||||||||||||   ||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| || ||| ||||| | ||||||||||||||||| || ||| || |||||||    
T  17351484 aaaacttattccaacgaaaataaaaaaaactatactccaagtttttacgtattagttt 17351541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 32017700 - 32017808
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  32017700 ttattctcataaaattaaatgcaaattacattcaactttctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatcttcctat 32017798  T
Q  197 aaaacttttt 206  Q
    ||||| ||||    
T  32017799 aaaacgtttt 32017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 41625675 - 41625520
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| ||||||||| ||||||||||| ||||||| || |||| ||||||||| |||| ||||||| |||||||||  ||||||||||||| |||    
T  41625675 ttattttcatgaaattaaattcaaattacatttaattttccctctcttccattttttc-ataatcaatagcgaatgaaaataatttttacatcttcctat 41625577  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  41625576 gaaacttatttcaaagaaaacacaaaaaactata-tttaaattcttatgttttagttt 41625520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 5984280 - 5984126
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat-------gaaaattgtttttacatc 189  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||| || |||||||||| |||||       |||||||||||||||||     
T  5984280 ttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaatagtcaatgaaaattgtttttacata 5984181  T
Q  190 ttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    ||  |||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  5984180 tttctataaaacttattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 42104408 - 42104262
Alignment:
Q  102 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 201  Q
    ||||| |||||||||||||| ||||||||||||| ||  |||| |||||| |||||||  |||||||||||||||||||||||||||||||  || ||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaac 42104309  T
Q  202 ttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    || || |||||| |||||  |||| ||||||||||||||||||||||||    
T  42104308 ttgttccaaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 9957581 - 9957489
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 192  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9957581 ttattctcataaaattaaatgcaaattacattcaactttctct--ctttcattttttc-ataaccaatagccaatgaaaattgtttttacatcttc 9957489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 104386 - 104260
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaattttctctttct--------ttcattttttccataaccaatagccaatgaaaattgtttttacatc 189  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||| |||||| |||||| |||||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctctctctctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatc 104287  T
Q  190 ttcttataaaacttttttcaaagaaaa 216  Q
    ||  |||||||||||||||||| ||||    
T  104286 tttctataaaacttttttcaaaaaaaa 104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 23233445 - 23233561
Alignment:
Q  135 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 234  Q
    ||||| ||||||||||| ||||||||||||||  ||| |||| ||||||||||| ||| ||||||  | ||||||||||||||||||||||||||||  |    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacacaaaaaactatacgtc 23233544  T
Q  235 aaattcttatgttttag 251  Q
    |||||||||||||||||    
T  23233545 aaattcttatgttttag 23233561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 12792903 - 12792794
Alignment:
Q  135 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 234  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||         |||||||||||||||||||||||||    
T  12792903 tctctctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12792814  T
Q  235 aaattcttatgttttagttt 254  Q
    || |||||||||||||||||    
T  12792813 aatttcttatgttttagttt 12792794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 5369186 - 5369064
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | ||||||||   | || ||||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  5369186 aaaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 5369087  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    | ||| | |||||||||||||||    
T  5369086 ttaaaaataacacaaaaaactat 5369064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 10154083 - 10153987
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 203  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || || ||||||| |||||||||||||||||||||||||| ||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 12730001 - 12729892
Alignment:
Q  135 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 234  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||         |||||||||||||||||||||||||    
T  12730001 tctctctctctcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12729912  T
Q  235 aaattcttatgttttagttt 254  Q
    || |||||||||||||||||    
T  12729911 aatttcttatgttttagttt 12729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 3463970 - 3463853
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| |||||| |||||||||| ||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatt 3463871  T
Q  207 tcaaagaaaacacaaaaa 224  Q
    ||||||| ||||||||||    
T  3463870 tcaaagataacacaaaaa 3463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 16153500 - 16153354
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||| |||| | |||| ||||| |||| | ||||| ||| || |||| |||   ||||||||||| |||||||||||||| |||||||||| ||    
T  16153500 aaaattaaatacaaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat-gtttttacatcttcctataaaacttatt 16153402  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| |||||||||||||||  | |||| | ||||||||||||||    
T  16153401 tcaaagataacacaaaaaactatgttacaaactattatgttttagttt 16153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 8959646 - 8959767
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | | |||||||| |||| | || |||||| || |||| |||    ||||||||||||||||||||||||| |||||||||| ||    
T  8959646 aaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 8959745  T
Q  207 tcaaagaaaacacaaaaaacta 228  Q
    ||||||| ||||||||||||||    
T  8959746 tcaaagataacacaaaaaacta 8959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 7071234 - 7071342
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| ||||||||||||||||||| |  |||| |||||| ||| ||| |||||| ||||||||||| ||||||||| |||  ||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccat 7071333  T
Q  197 aaaactttt 205  Q
     ||||||||    
T  7071334 gaaactttt 7071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 8506443 - 8506584
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||      ||||||||||||||||||||||||  |||||||||| ||    
T  8506443 aaaattaaatgcaaagtgcattcaatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatctttctataaaacttatt 8506536  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || |||| || |||||||  | |||| |  |||||||||||||    
T  8506537 tcaaggataacataagaaactatgttgcaaactactatgttttagttt 8506584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 5736395 - 5736273
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | | |||||||| ||||  |||||||||| ||  ||| |||   | ||||||||||||||||||| |||| ||||||| || ||    
T  5736395 aaaattaaatgcaaaatgcgttcaatttgctctccctttcattttctctgtaatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatt 5736296  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||| ||||||||||    
T  5736295 tcaaagataacataaaaaactat 5736273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 12730145 - 12730103
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12730145 ttattctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 24439575 - 24439660
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||||||||||||||||| ||||||||||  |||   ||| |||||||||||||  | |||||||||| |||||||||||||||||    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctt 24439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 32019929 - 32019974
Alignment:
Q  209 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  32019929 aaagaaaacacagaaaactatactccaaattcttatgttttagttt 32019974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 842787 - 842744
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  842787 gtcccaaaatataagcaaaaaagataaacttttatcttttccaa 842744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 1144586 - 1144524
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 229  Q
    |||||||||||||||||||||| ||| ||||||| || ||| ||||| |||||||||||||||    
T  1144586 ccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactat 1144524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 32079512 - 32079657
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| ||  |||  ||||  | ||||||||||||||||||||||   || |||||  |||    
T  32079512 aaattaaatgcaaattgcatttaattt-ctctccctctcattttctctgtaataaataatcgatgaaaattgtttttacatctttccattaaactaattt 32079610  T
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||| || |||| ||||||||||| |||||||| | ||||||||||||    
T  32079611 caaggagaacataaaaaactataatccaaattataatgttttagttt 32079657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 6391876 - 6391997
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||| |||||||| |||| | | | || | ||||||||||| || ||||| |||| ||||| ||| |||||||||||||||  ||| |||||| |||    
T  6391876 aaattaattgcaaattgcatttattatactttctctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttattt 6391975  T
Q  208 caaagaaaacacaaaaaactat 229  Q
    ||||||  | ||||||||||||    
T  6391976 caaagatgatacaaaaaactat 6391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 9957668 - 9957631
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9957668 gtcccaaaatataagcaaaaaagacaaacttttatctt 9957631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 12792966 - 12792929
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattt 134  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12792966 ttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 28907074 - 28907192
Alignment:
Q  107 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 204  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| || ||| ||||||     
T  28907074 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 28907171  T
Q  205 tttcaaagaaaacacaaaaaa 225  Q
    ||||||||| |||||||||||    
T  28907172 tttcaaagataacacaaaaaa 28907192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 28943469 - 28943587
Alignment:
Q  107 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 204  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| || ||| ||||||     
T  28943469 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 28943566  T
Q  205 tttcaaagaaaacacaaaaaa 225  Q
    ||||||||| |||||||||||    
T  28943567 tttcaaagataacacaaaaaa 28943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 29307282 - 29307221
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaacta 228  Q
    |||||||||||| ||||||||||||| |||||||||| ||| |||||  |||||||||||||    
T  29307282 ccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaacta 29307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 20643924 - 20643960
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    |||||||||||||||||||||||||||||||||||||    
T  20643924 tcccaaaatataagcaaaaaagacaaacttttatctt 20643960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 30703641 - 30703725
Alignment:
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaa 225  Q
    ||||||||||| |  |||| ||||| ||||||||| || ||| ||||||||| ||||||| || ||||||||| |||||||||||    
T  30703641 tctttcattttctgaataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaa 30703725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 8146730 - 8146860
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||||||||||||||| | ||||| ||||  || ||||||| ||||||||  ||| ||||||||||||  ||||| || ||   ||||||||| ||     
T  8146730 aaattaaatgcaaattacaattaatttgctctccctctcattttctccataacagataaccaatgaaaatttattttaaatttttccataaaacttattc 8146829  T
Q  208 caaagaaaacacaaaaaactatactccaaatt 239  Q
    || | | ||||||| |||||||||||||||||    
T  8146830 caga-agaacacaagaaactatactccaaatt 8146860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 8225372 - 8225407
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  8225372 gtcccaaaatataagcaaaaaagacaaacttttatc 8225407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 42273558 - 42273593
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  42273558 gtcccaaaatataagcaaaaaagacaaacttttatc 42273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 9957488 - 9957443
Alignment:
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9957488 caaagaaaacacaaaaa-ctatactccaaattctcatgttttagttt 9957443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 39505484 - 39505450
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  39505484 gtcccaaaatataagcaaaaaagacaaacttttat 39505450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 8146169 - 8146044
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  ||| | ||| ||||| |||||||    || | ||||| |||| ||||||||||||   || |||||| |    
T  8146169 taaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttat 8146070  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    ||||| || ||||||||||| |||||    
T  8146069 ttcaaggagaacacaaaaaattatac 8146044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 12638892 - 12639017
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| ||||||||||||   |||||| || |    
T  12638892 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 12638991  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    | ||| || ||||||||||| |||||    
T  12638992 tccaaggagaacacaaaaaattatac 12639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 5659676 - 5659584
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctct-ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 198  Q
    ||||||||||| ||| | |||||||||| || | || |||||||||||| |||| |||   ||||| |||||||||||||||||||| |||||    
T  5659676 aaaattaaatgtaaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 30893365 - 30893258
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaag-aaaacacaaaaaactatactccaaattcttatg 245  Q
    ||||| || ||||| |||| ||||| |||||| ||||||||||||   |||||| ||  ||| ||| ||||||||| ||||||||||||||||| | |||    
T  30893365 attttatctataacaaataaccaataaaaattatttttacatctttccataaaa-ttaattctaagaaaaacacaagaaactatactccaaattatcatg 30893267  T
Q  246 ttttagttt 254  Q
    |||||||||    
T  30893266 ttttagttt 30893258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 104472 - 104437
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||| ||||||||||||||||||||    
T  104472 gtcccaaaatataagtaaaaaagacaaacttttatc 104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 842729 - 842698
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacatt 128  Q
    ||||||||||||||||||||||||||||||||    
T  842729 ttattctcataaaattaaatgcaaattacatt 842698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 12730239 - 12730204
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||| ||||||||||||||||||||    
T  12730239 gtcccaaaatataagtaaaaaagacaaacttttatc 12730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 34425239 - 34425274
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||| |||||||||||||||||||||||||||||||    
T  34425239 gtcctaaaatataagcaaaaaagacaaacttttatc 34425274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 446054 - 446000
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt 151  Q
    ||||| |||| |||||||||| ||||| ||||||||||| ||| |||||||||||    
T  446054 ttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcatttt 446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 1238522 - 1238596
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat 171  Q
    ||||||| |||||||||||  |||||||||||||||||||| | ||   |||||| || ||||||||||| ||||    
T  1238522 ttattcttataaaattaaaaacaaattacattcaattttctttctcccccattttctctataaccaataggcaat 1238596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 7071150 - 7071184
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||| |||||||||||||||||||||    
T  7071150 ccaaaatataagcgaaaaagacaaacttttatctt 7071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 23233395 - 23233429
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaa 131  Q
    |||||||||||||| ||||||||||||||||||||    
T  23233395 ttattctcataaaaataaatgcaaattacattcaa 23233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 25840772 - 25840806
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    ||||||||||||||||||||| |||||||||||||    
T  25840772 gtcccaaaatataagcaaaaatgacaaacttttat 25840806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 13146732 - 13146857
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||| ||||| ||||||||||  |||   |||  |||| |||||||    || ||||||| |||| ||||||||||||   ||||||||| |    
T  13146732 taaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctttccataaaacttat 13146831  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    | |||||| ||||||||||| |||||    
T  13146832 tccaaagagaacacaaaaaattatac 13146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 29493669 - 29493592
Alignment:
Q  105 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt 182  Q
    |||||||| ||||||||||| ||||||||| | || |||   ||||| |||||||||||||  |||| ||||||||||    
T  29493669 ataaaattgaatgcaaattatattcaatttacactctctcctattttctccataaccaataatcaataaaaattgttt 29493592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 32432319 - 32432380
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 229  Q
    ||||||||||| ||||||||||||  |||||||||| |||||| || |||| || |||||||    
T  32432319 caatgaaaattatttttacatctttatataaaacttatttcaaggataacataagaaactat 32432380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 12793056 - 12793024
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||| |||||||||||||    
T  12793056 ccaaaatataagcaaaaaatacaaacttttatc 12793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 16286178 - 16286114
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatac 231  Q
    ||||||| |||| |||||||||||| | || |||||| || |||||| ||||||||||| |||||    
T  16286178 ccaatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaaattatac 16286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 134
Target Start/End: Complemental strand, 17825354 - 17825326
Alignment:
Q  106 taaaattaaatgcaaattacattcaattt 134  Q
    |||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaattt 17825326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 157; Significance: 4e-83; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 44 - 254
Target Start/End: Complemental strand, 791 - 581
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 143  Q
    ||||||||||||||||||| |||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||| |||||||    
T  791 ccaaaatataagcaaaaaacacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttatctttct 692  T
Q  144 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  691 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacataaaactatactccaaattctta 592  T
Q  244 tgttttagttt 254  Q
    |||||||||||    
T  591 tgttttagttt 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 4e-83; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 32624227 - 32624013
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||||||||||||||||    
T  32624227 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctct 32624128  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32624127 ctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactacactccaaatt 32624028  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  32624027 cttatgttttagttt 32624013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 41 - 250
Target Start/End: Complemental strand, 39555807 - 39555598
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||| ||||||     
T  39555807 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaatgttctctc 39555708  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  39555707 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaacctatactccaaattc 39555608  T
Q  241 ttatgtttta 250  Q
    ||||||||||    
T  39555607 ttatgtttta 39555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 41 - 244
Target Start/End: Complemental strand, 12449188 - 12448985
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||     
T  12449188 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctc 12449089  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12449088 tctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 12448989  T
Q  241 ttat 244  Q
    ||||    
T  12448988 ttat 12448985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 24190414 - 24190622
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 143  Q
    |||||||||||| ||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24190414 ccaaaatataag-aaaaaagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacatt-aattttctctttct 24190511  T
Q  144 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24190512 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaaactatactccaaattctta 24190611  T
Q  244 tgttttagttt 254  Q
    |||||||||||    
T  24190612 tgttttagttt 24190622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 2125977 - 2126191
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||| |||||||||| ||||||||||||||||||||||||  |||          ||| |||||||| ||||||||||||||||||||||||||||||||    
T  2125977 gtcctaaaatataagtaaaaaagacaaacttttatcttttttaaattttttttttgttcattctcattaaattaaatgcaaattacattcaattttctct 2126076  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  2126077 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatattccaaatt 2126176  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  2126177 cttatgttttagttt 2126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 15959805 - 15959648
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15959805 ttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15959705 aaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 15959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 96 - 254
Target Start/End: Original strand, 35691387 - 35691546
Alignment:
Q  96 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctt 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |    
T  35691387 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccct 35691486  T
Q  195 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35691487 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 35691546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 6785452 - 6785608
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6785452 ttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatat 6785551  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  6785552 aaaactttttcaaaagaaaacacaaaaaactatactcc-aattcttatgttttagttt 6785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 6786834 - 6786991
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  6786834 ttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatat 6786933  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  6786934 aaaactttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttt 6786991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 40718674 - 40718831
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||| |||    
T  40718674 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcatat 40718773  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40718774 aaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatattttagttt 40718831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 33369549 - 33369703
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  33369549 ttattctcataaaattaaatgcaaattacattcaattttctct--ctttcattttttccataaccaatagccaatgaaaattgtttttacatct-catat 33369645  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33369646 aaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 33369703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 42 - 254
Target Start/End: Complemental strand, 32983390 - 32983180
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctcttt 141  Q
    ||||||||||||||||||||||||||| |||||||||||  ||            |||||||||||||||||||||||||||| |||||||||||||| |    
T  32983390 tcccaaaatataagcaaaaaagacaaatttttatcttttttaagaatttttttgtttattctcataaaattaaatgcaaattatattcaattttctctct 32983291  T
Q  142 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 241  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||| |    
T  32983290 ctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttcttataaaac-ttttccaaagaaaacacaaaaaactatacttccaatttt 32983193  T
Q  242 tatgttttagttt 254  Q
    |||||||||||||    
T  32983192 tatgttttagttt 32983180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 45226134 - 45226291
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||    
T  45226134 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctat 45226233  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  45226234 aaaacttttttcaaagaaaatacataaaactatactctaaattattatgttttagttt 45226291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 45 - 246
Target Start/End: Complemental strand, 43667517 - 43667319
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctt 144  Q
    |||||||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||| |||||||||||||||||||||  |||    
T  43667517 caaaatataagcaaaaaagacaaacttttatctttttcaagatttttttgt-ttattctcataaaattaaatgtaaattacattcaattttctct--ctt 43667421  T
Q  145 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  43667420 tcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaaattatactttaaattcttat 43667321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 28016909 - 28016754
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||||||||||||||| |||    
T  28016909 ttattctcataaaattaaatgcaagttacattcaattttctct--cttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctat 28016812  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  28016811 aaaacatttttcaaagaaaacaccaaaaactatactctaaattcttatgttttagttt 28016754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 39932737 - 39932580
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||| ||||||||||||| ||||||||||    
T  39932737 ttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttat 39932638  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  39932637 aaaacttattaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttt 39932580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 42965979 - 42965824
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  42965979 ttattcttataaaattaaatgcaaattacattcaattttctctctctttcattttt-ccataaccaatagccaatgaaaattgtttttacatcttcctat 42965881  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| ||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  42965880 aaaa-tttttccaaagaaaacacaaaaaactaaacttcaaatttttatgttttagttt 42965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 47014655 - 47014501
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||    
T  47014655 ttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctat 47014557  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  47014556 aaaacttttttcaacgaaaacacaaaaaac--tactccagattcttatgttttagttt 47014501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 46 - 254
Target Start/End: Complemental strand, 28120970 - 28120763
Alignment:
Q  46 aaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttcttt 145  Q
    |||||||||| ||||||||||||||||||||||||| | |           |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  28120970 aaaatataagtaaaaaagacaaacttttatcttttcaagatttcttttgt-ttattcacataaaattaaatgcaaattacattcaattttctctctcttt 28120872  T
Q  146 cattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatg 245  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |  ||| ||| ||||||||||||||||||||||| ||||||||     
T  28120871 cattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactatactccacattcttatt 28120772  T
Q  246 ttttagttt 254  Q
    | |||||||    
T  28120771 tcttagttt 28120763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 46542980 - 46543135
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  |||||||||| |||| ||||||||||||||| ||||||||||| ||||||| |||    
T  46542980 ttattctcataaaattaaatgcaaattgcatttaattttctct--ctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctat 46543077  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46543078 aaattttttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 46543135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 7468128 - 7467970
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  | ||| |||||||||||||||||||| ||||||||||| | |    
T  7468128 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttccttt 7468029  T
Q  197 aaaacttttttcaaagaaaacacaaaaaacta-tactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||    
T  7468028 aaaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttt 7467970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 105 - 250
Target Start/End: Complemental strand, 13136708 - 13136566
Alignment:
Q  105 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 204  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||  |||    
T  13136708 ataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctat-aattttt 13136612  T
Q  205 tttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||    
T  13136611 ttttaaagaaaacacaaaaaactatactccaaattcttatgtttta 13136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 1820411 - 1820568
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| |||||| ||| ||||||||||||| |||    
T  1820411 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctat 1820509  T
Q  197 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||| ||| ||||| ||||||||| |||||||||||||||||||||||    
T  1820510 aaaactttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttt 1820568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 47600204 - 47600048
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||    
T  47600204 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctat 47600105  T
Q  197 aaaactt-ttttcaaaga--aaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||||| ||||  ||||  | ||| |||||||||||||| ||||||||||||||||    
T  47600104 aaaactttttttttaagattacacaaaaaaaactatactctaaattcttatgtttta 47600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 46818667 - 46818515
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||| |||||||| |||| ||||||||   ||||||||| |||||||| | |||||||||||||||||||||| |||||| |||    
T  46818667 ttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttcctat 46818568  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 249  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  46818567 aaaacttttttcaaagaaaatacaaaaaactatactttaaattcttatgtttt 46818515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 2246179 - 2246026
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || |||  ||| ||| ||||||||||||||||| ||||||||| ||| |||    
T  2246179 ttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctat 2246080  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  2246079 aaaacttatttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 3076291 - 3076444
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| |||||||||||||  ||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||||| || |||| ||||||||||||||||| || |||||||||||| ||||    
T  3076391 aaaacttattccaaataaaacacaaaaaactatgctacaaattcttatgcttta 3076444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 3875186 - 3875031
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca----atagccaatgaaaattgtttttacatcttc 192  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    ||||||||| |||||||||||||||| |||    
T  3875186 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattc 3875087  T
Q  193 ttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
     |||||||||||||  ||| |||||||  ||||||||||| |||||||||||||||||    
T  3875086 ctataaaactttttcaaaaaaaaacac--aaaactatacttcaaattcttatgtttta 3875031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 11241073 - 11241176
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 11241172  T
Q  247 ttta 250  Q
    ||||    
T  11241173 ttta 11241176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 24728792 - 24728634
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||  ||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccat 24728693  T
Q  197 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||  ||||||||||||| |||||||| || |||||||||||||||||||||    
T  24728692 gaaacttattcgaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttt 24728634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 33431557 - 33431712
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||||||||||||||||||| |||| || |||    
T  33431557 ttattctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctat 33431654  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| ||| ||||||||||||||||| || |||||||||||| | ||||||    
T  33431655 aaaacttttttaaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttt 33431712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 44148997 - 44148844
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||||||  ||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctct--ctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccat 44148902  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  44148901 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 44148844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 37735548 - 37735395
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | || |||||| ||||||| ||||||||||| |||||||||||||| |||||  ||    
T  37735548 ttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccat 37735449  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
     |||||| || ||||||||| ||||||||||||||| || ||||||||||||||    
T  37735448 gaaacttattccaaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 32742342 - 32742210
Alignment:
Q  122 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa 221  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    ||||||||||||||||| || || ||||||||||||||| |||||||||||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaatgattaatgaaaattgtttttatatttttttataaaactttttttaaagaaaacacaa 32742243  T
Q  222 aaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||| ||||||||||| ||||||||    
T  32742242 aaaactatactcaaaattcttatgctttagttt 32742210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 16854139 - 16854250
Alignment:
Q  100 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaa 199  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||  |||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaa 16854238  T
Q  200 acttttttcaaa 211  Q
    ||||||||||||    
T  16854239 acttttttcaaa 16854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 3861858 - 3861703
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| |||||||||||||||||||| ||| |||||| |||  |||||||||||| ||||| |||||||||||||||||||||||||||||||   ||    
T  3861858 ttattcttataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaat 3861761  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||  |||||||||| |||||| |||||| |||||| ||||||||||||||    
T  3861760 aaaacttattctaaagaaaacataaaaaattatacttcaaattattatgttttagttt 3861703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 50369954 - 50370071
Alignment:
Q  97 ttattctcataaaattaaatgcaaatta----cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 192  Q
    |||||||||||||||||||| |||||||    ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  50369954 ttattctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttc 50370052  T
Q  193 ttataaaacttttttcaaa 211  Q
     ||||||||||||||||||    
T  50370053 ctataaaacttttttcaaa 50370071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 10558920 - 10558796
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 197  Q
    ||||||||| |||||||||| |||||||||| |||||| ||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||  |||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  198 aaacttttttcaaagaaaacacaaa 222  Q
    ||| || || |||||||||||||||    
T  10558820 aaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 25391680 - 25391824
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||| || || | ||||||| | ||||||||||||||||||||||||| ||| |||    
T  25391680 ttattctcataaaattaaatgcaaattacattcaatttt-tatctcttccacttct-ccataactattagccaatgaaaattgtttttacattttcatat 25391777  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    ||||||| | | ||||||||||||||||| |||||| |||||||||||    
T  25391778 aaaacttatct-aaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 5858526 - 5858404
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||||||||||||||||||||||||||||| |||||| |||||||||| ||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatt 5858427  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  5858426 tcaaggataacacaagaaactat 5858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 6787154 - 6787050
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||    
T  6787154 ttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctat 6787056  T
Q  197 aaaact 202  Q
    ||||||    
T  6787055 aaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 23392330 - 23392211
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||| || ||  |||    
T  23392330 ttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttctat 23392232  T
Q  197 aaaacttttttcaaagaaaac 217  Q
    ||||||| || ||||||||||    
T  23392231 aaaacttattccaaagaaaac 23392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 43765290 - 43765438
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||  |||||| |||||||||| |||||||||||| | |||| |||||| | |||||| |||| |||||||||| ||||||||||||||| |||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttat 244  Q
    ||||||| ||  ||||||||||| ||||||||||||| |||||| ||||    
T  43765390 aaaacttattctaaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 52984979 - 52985086
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||||||   | |||||| || |||||||||||||||||||||||||||||||||||||||    
T  52984979 attttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgt 52985078  T
Q  247 tttagttt 254  Q
     |||||||    
T  52985079 attagttt 52985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 5950445 - 5950567
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||| ||||| |||| |||||||||||||| |||||||||  |||||||||||||||||||||||||| |||||||||| ||    
T  5950445 aaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatt 5950544  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  5950545 tcaaggataacacaagaaactat 5950567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 7397712 - 7397834
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||| || ||    
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatt 7397811  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  7397812 tcaaagataacacaaaaaactat 7397834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 7876091 - 7875952
Alignment:
Q  113 aaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat--aaaacttttttcaa 210  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||| ||||||||||||  |||  ||||     |||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattcaa 7875992  T
Q  211 agaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    |||||||||||||||||||| | |||||| |||| |||||    
T  7875991 agaaaacacaaaaaactataattcaaatttttatatttta 7875952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 47303071 - 47302916
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| ||||||||| | ||||| ||||||||||||||||||  |||||||||||| ||    
T  47303071 ttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttccta 47302973  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    | |||||| || | || |||||||  |||| |||||||||| ||||||| |||||||||    
T  47302972 tgaaacttattcctaaaaaaacac--aaaattatactccaatttcttatattttagttt 47302916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 1034854 - 1035004
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||| |||||||||||||||| | | || |  ||||| ||  |||||||||| | |||||||||||||||| ||||||| ||    
T  1034854 ttattctcatgaaattaaatgcgaattacattcaatttttt-tctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatcttctcat 1034952  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||||| || ||||||||||||  ||||| |||| ||||||||||||||||||    
T  1034953 aaaacttattccaaagaaaacac--aaaacaatacgccaaattcttatgtttta 1035004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 16688142 - 16688264
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||| ||| | || ||||||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  16688142 aaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 16688241  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||| | |||| ||||||||||    
T  16688242 tcaaaaataacataaaaaactat 16688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 30221771 - 30221874
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||| ||||||||||||| ||||| |||| |||||||||||||||  ||||||||| ||| ||||||||||||||||| |||| ||||| |||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattccaagttcttatgt 30221870  T
Q  247 ttta 250  Q
    ||||    
T  30221871 ttta 30221874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 45840220 - 45840074
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||   |||||||||||||||||| ||||||| |||||||| | ||    
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatt 45840122  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| | |||||||||||||||  | |||| | ||||||||||||||    
T  45840121 tcaaaaataacacaaaaaactatgttacaaactattatgttttagttt 45840074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 37538815 - 37538937
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||| |||||| | |||||||||| |||  ||||||||||| || |||||||| | |||||||||||||| ||||||||||| |||||||||| ||    
T  37538815 aaaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatt 37538914  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    |||| || ||||||| |||||||    
T  37538915 tcaaggataacacaagaaactat 37538937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 4672923 - 4672984
Alignment:
Q  193 ttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4672923 ttataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatattttagttt 4672984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 8889845 - 8889729
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||| || |||||||||       ||||||||||||||||||||| |||||||||| ||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaat-------gaaaattgtttttacatcttcctataaaacttatt 8889753  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    |||| || ||||||| ||||||||    
T  8889752 tcaaggataacacaataaactata 8889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 32318687 - 32318571
Alignment:
Q  135 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt-ttttcaaagaaaacacaaaaaactatactc 233  Q
    ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||  ||| |||| | |||||| |||||||    
T  32318687 tctctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaaacaaaaaagaaaaaattatactc 32318588  T
Q  234 caaattcttatgtttta 250  Q
    |||||| |||| |||||    
T  32318587 caaatttttatatttta 32318571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 50012587 - 50012727
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||| |||| |||||||||||| |||||| || ||| |||    
T  50012587 ttattcttataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaattatttttatatattcctat 50012685  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
     ||            ||||||||||||||||||||||||||||| ||| |||||    
T  50012686 gaa------------gaaaacacaaaaaactatactccaaattcctatatttta 50012727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 298812 - 298676
Alignment:
Q  119 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 218  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||||||| |||||  |||||||||||||  || |||||| ||  ||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccat-aaacttattctaaagaaaaca 298714  T
Q  219 caaaaaactatactccaaat--tcttatgttttagttt 254  Q
    ||  |||||||||| ||| |  | ||||||||||||||    
T  298713 catcaaactatacttcaagttattttatgttttagttt 298676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 25185459 - 25185341
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   ||||||||| ||||||| |||||||| |||||||||| ||    
T  25185459 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatt 25185360  T
Q  207 tcaaagaaaacacaaaaaa 225  Q
    ||||||| |||||||||||    
T  25185359 tcaaagataacacaaaaaa 25185341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 44510374 - 44510252
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| ||||   |||||||||||||||||||| |||| ||||||| || ||    
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatt 44510275  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||| | |||||||||||||||    
T  44510274 tcaaaaataacacaaaaaactat 44510252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  115 atgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtt 181  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||    
T  14086966 atgcaaattacattcaattttctct--cttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 254
Target Start/End: Complemental strand, 30701524 - 30701393
Alignment:
Q  123 tacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaa 222  Q
    |||||||||||| |||| | ||||||||| || |||| |||   |||||||||||| |||| |||||||| |||||||||| ||||||||| ||||||||    
T  30701524 tacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaa 30701425  T
Q  223 aaactatactccaaattcttatgttttagttt 254  Q
    ||| |||  | |||| |  |||||||||||||    
T  30701424 aaattatgttacaaactactatgttttagttt 30701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 35366358 - 35366211
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||||| |||| | |||||||||| || | ||| ||||||  || |||||||||| ||||| |||||||||||||||||||  ||||||| || ||    
T  35366358 aaaattaaattcaaagtgcattcaatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctataaaatttatt 35366259  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  35366258 tcaacgataacacaagaaactatgttgcaaactactatgttttagttt 35366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 254
Target Start/End: Complemental strand, 52841599 - 52841453
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    ||||||| |||||||| || ||| ||| ||||| ||||||||||  | ||||| |||| ||||||||||||||||| |||||||  ||| |||||| |||    
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattt 52841500  T
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     || || || |||| |||||||||| |||| | || |||||||||||    
T  52841499 taaggataagacaagaaactatactacaaactattgtgttttagttt 52841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 47026655 - 47026736
Alignment:
Q  109 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tagccaatgaaaattgtttttacatc 189  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  47026655 aattaaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaattatttatacatc 47026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 15912204 - 15912307
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| ||  ||| ||| |  ||||||||||||||||||||||||| |||||||||| ||    
T  15912204 aaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatt 15912303  T
Q  207 tcaa 210  Q
    ||||    
T  15912304 tcaa 15912307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 41063747 - 41063870
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaa-ctttt 205  Q
    ||||||||||||||| | ||||||||||  ||| ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||  ||||||| ||| |    
T  41063747 aaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaagcttat 41063846  T
Q  206 ttcaaagaaaacacaaaaaactat 229  Q
    || ||  | |||||||||||||||    
T  41063847 tttaagaataacacaaaaaactat 41063870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 50176588 - 50176675
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| |||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  50176588 ccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttt 50176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 42724101 - 42724247
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| | |||||| |||| | ||| |||||||||||||||||||||  | |||||  |||    
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttctcgtgaaactaattt 42724200  T
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||  | |||| || |||||||||| |||||  | ||||||||||||    
T  42724201 caagaagaacagaagaaactatacttcaaatgataatgttttagttt 42724247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 13351686 - 13351786
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||| |||||||||| | ||||||||||  |||   ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttttt 13351785  T
Q  207 t 207  Q
    |    
T  13351786 t 13351786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 50665259 - 50665315
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 153  Q
    |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  50665259 ttattctcatgaaattaattgcaaattacatttaattttctctctctttcatttttt 50665315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 34102127 - 34102049
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 186  Q
    ||||||||||||||| | ||| |||||| |||| ||||||| ||| || |||||||||| ||||||||||||||||||||    
T  34102127 aaaattaaatgcaaagtgcat-caatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 7190663 - 7190809
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    |||||||||||||||| | || ||||| ||||  || ||||||| || ||||| |||| | |||  ||||| |||||||||||| | ||  ||||  |||    
T  7190663 aaattaaatgcaaattgcctttaatttgctctccctctcattttctctataacaaataactaatataaattatttttacatcttttcattgaactaattt 7190762  T
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||| || ||||||| ||||||||||| ||||| | ||||||||||||    
T  7190763 caaggagaacacaagaaactatactctaaattatcatgttttagttt 7190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 16661521 - 16661639
Alignment:
Q  107 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 204  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| || ||| ||||||     
T  16661521 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 16661618  T
Q  205 tttcaaagaaaacacaaaaaa 225  Q
    ||||||||| |||||||||||    
T  16661619 tttcaaagataacacaaaaaa 16661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 6786746 - 6786781
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  6786746 gtcccaaaatataagcaaaaaagacaaacttttatc 6786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 7468205 - 7468170
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  7468205 gtcccaaaatataagcaaaaaagacaaacttttatc 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 28016996 - 28016961
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  28016996 gtcccaaaatataagcaaaaaagacaaacttttatc 28016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 6787242 - 6787208
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||||||||||||||    
T  6787242 tcccaaaatataagcaaaaaagacaaacttttatc 6787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 11241039 - 11241077
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaatttt 135  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  11241039 ttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 28916675 - 28916589
Alignment:
Q  105 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    ||||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || |||||||||||| ||||||||||||    
T  28916675 ataaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 28916589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 44149084 - 44149050
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  44149084 gtcccaaaatataagcaaaaaagacaaacttttat 44149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 51339012 - 51338938
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa 221  Q
    ||||| || ||||| |||| ||||||||||||| |||||||||||  ||| |||||| ||||||||| |||||||    
T  51339012 attttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatttcaaagacaacacaa 51338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 15959892 - 15959855
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    |||||||||||||||||||||||||||| |||||||||    
T  15959892 gtcccaaaatataagcaaaaaagacaaatttttatctt 15959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 23873986 - 23873861
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| |||| |||||  ||| | ||| ||||| |||||||    || |||||||||||| ||||||||||||   || |||||| |    
T  23873986 taaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 23873887  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    | ||| || ||||||||||| |||||    
T  23873886 tccaaggagaacacaaaaaattatac 23873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 39151315 - 39151242
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgt 180  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || ||||| |||| ||||||||||||||    
T  39151315 aaaattaaatgtaaagtgcattcaatttgctttatctttcattttatcaataactaataaccaatgaaaattgt 39151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 43656196 - 43656071
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| | |||||    || |||||||||||| ||||||||||||   || |||||| |    
T  43656196 taaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 43656097  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    ||||| || ||||||||||| |||||    
T  43656096 ttcaaggagaacacaaaaaattatac 43656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 43359696 - 43359740
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcatttt 151  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcatttt 43359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 35884212 - 35884337
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| |||| ||| |  ||||  ||| ||||| || ||||    || |||||||||||| ||||||||||||   |||||| || |    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatttttacatctttccataaaatttat 35884311  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    |||||| | ||||||||||| |||||    
T  35884312 ttcaaaaagaacacaaaaaattatac 35884337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 44056457 - 44056377
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 186  Q
    ||||||||||||||| || ||||| |||||||||   | | ||||| ||||||| || || ||||||| ||||||||||||    
T  44056457 taaaattaaatgcaatttgcattccattttctctccttcttattttctccataatcattaaccaatgagaattgtttttac 44056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 46803760 - 46803704
Alignment:
Q  173 aaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 229  Q
    |||||||||||||||||||  ||| |||||| || ||| || |||||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactat 46803704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 5e-79; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 35517065 - 35517276
Alignment:
Q  44 ccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttc 142  Q
    ||||||||||||||||||||||||||||||||||||| ||| |          |||||||||||||||||||||||||||||||||||||||||||||||    
T  35517065 ccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttc 35517164  T
Q  143 tttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctt 242  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35517165 tttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttttccaaagaaaacacaaaaaactatactccaaattctt 35517264  T
Q  243 atgttttagttt 254  Q
    ||||||||||||    
T  35517265 atgttttagttt 35517276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 28599369 - 28599155
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||||||| |||||||||||||||||||||||||||||           ||| ||||||||||||||||||||| |||||||||||||||||||    
T  28599369 gtcccaaaatataatcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatattacattcaattttctct 28599270  T
Q  140 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  28599269 ttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactatactccaaatt 28599170  T
Q  240 cttatgttttagttt 254  Q
    |||||||||||||||    
T  28599169 cttatgttttagttt 28599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 6110421 - 6110206
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||     
T  6110421 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctc 6110322  T
Q  141 tct--ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaat 238  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||    
T  6110321 tctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaagctatactccaaat 6110222  T
Q  239 tcttatgttttagttt 254  Q
    ||||||||||||||||    
T  6110221 tcttatgttttagttt 6110206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 45085197 - 45085406
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||| |||||||||||||||| ||            |||||||||||||||||||||||||||||||||||||||||||     
T  45085197 gtcccaaaatataagcaaaaaagataaacttttatcttttctaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctc 45085296  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45085297 tctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatactccaaattc 45085396  T
Q  241 ttatgtttta 250  Q
    ||||||||||    
T  45085397 ttatgtttta 45085406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 41 - 249
Target Start/End: Original strand, 41528196 - 41528404
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||||||||||||||||||||||||||    
T  41528196 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctt 41528295  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||||||||||||||||||||||||| |||||||    
T  41528296 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaactatacttcaaattc 41528395  T
Q  241 ttatgtttt 249  Q
    |||||||||    
T  41528396 ttatgtttt 41528404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 3201322 - 3201479
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  3201322 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 3201421  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  3201422 aaaactttttccaaagaaaacacaaaaaactatactttaaattcttatgttttagttt 3201479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 19264095 - 19264253
Alignment:
Q  97 ttattctcataaaattaaatgcaaa-ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19264095 ttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttccta 19264194  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19264195 taaaactttttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttt 19264253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 45660361 - 45660521
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  45660361 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 45660460  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaa---attcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  45660461 aaaacttttttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttt 45660521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 11617020 - 11617173
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||    
T  11617020 ttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11617120 aaaacttttttcaaagaaaataccaaaaactatactccaaattcttatgtttta 11617173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 33198795 - 33198638
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||    
T  33198795 ttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctat 33198696  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||| |||||||||||||||||||| | ||||||||||||| |||||||||    
T  33198695 aaaacttcttttaaagaaaacacaaaaaactagagtccaaattcttatattttagttt 33198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 28858305 - 28858465
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||  |||    
T  28858305 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctat 28858404  T
Q  197 aaaacttttttcaaagaaaacacaaaaaacta---tactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||||   || |  ||||||||||||||||||||    
T  28858405 aaaacttttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttt 28858465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 14873958 - 14874105
Alignment:
Q  97 ttattctcataaaattaaa-tgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  14873958 ttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttccta 14874057  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  14874058 taaaacttttttcaaagaaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 12938238 - 12938395
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||  ||| ||| ||||| ||||| ||||||| |||||||||||||||||||||||||||  ||| |||    
T  12938238 ttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctat 12938337  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12938338 aaaacttatttcaaagaaagcacaaaaaactatactccaaattcttatgttttagttt 12938395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 404 - 519
Target Start/End: Complemental strand, 23690388 - 23690274
Alignment:
Q  404 atgtgttcacttttactagccacacacaaattcgttagttcatctatgtaatggattctcttcaacttactaatgaacaaaagcaattggcttcaagaga 503  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23690388 atgtgtccacttttactagccacacacaaattcgttagttcatctatgtaatggattctcttcaacttactaatgaacaaaagcaa-tggcttcaagaga 23690290  T
Q  504 gagaaggaaaaaagtg 519  Q
    ||||||||||||||||    
T  23690289 gagaaggaaaaaagtg 23690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 29524205 - 29524048
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||||||| ||| || |||||||||||| ||||||||    
T  29524105 gaaacttattccaaagaaaacacaaaaaattatgctacaaattcttatgctttagttt 29524048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 25572042 - 25572198
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||  ||    
T  25572042 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttcccat 25572140  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  25572141 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 25572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 8701601 - 8701755
Alignment:
Q  100 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaa 199  Q
    ||||||| ||||||||| |||||| |||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaa 8701700  T
Q  200 acttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||||||| |||||||||| || |||||| ||||||||||||||    
T  8701701 acttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttt 8701755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 303 - 403
Target Start/End: Complemental strand, 23690683 - 23690582
Alignment:
Q  303 ttgtaccatttcatggggaaatgtcaa-gttaacattgcttctactttatcaaatccaaaattttggatattatgtactttgaatacaacaggaaaacaa 401  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23690683 ttgtaccatttcatggggaaatgtcaaagttaacattgcttctactttatcaaatccaaaattttggatattatgtactttgaatacaacaggaaaacaa 23690584  T
Q  402 at 403  Q
    ||    
T  23690583 at 23690582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 24204693 - 24204536
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| | |||||||| |||||| |||||||||||||| |||| |||||| | ||||||||||||||||||||||||| |||||||| ||| |||    
T  24204693 ttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctat 24204594  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| || |||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  24204593 aaaacttattccaaagaaaacacaataaattatactccaaattcttaggttttagttt 24204536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 9864881 - 9864725
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||||||| |||  ||| |||||| ||||||| |||| ||||||||||||||||||||| |||||  ||    
T  9864881 ttattctcatgaaattaaatgcaaattacattcaattttatct--cttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccat 9864784  T
Q  197 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  9864783 gaaacttattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttt 9864725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 6766098 - 6765944
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt-ccataaccaatagccaatgaaaattgtttttacatcttctta 195  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||| |||| |||||||||||||||||||| ||    
T  6766098 ttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttccta 6765999  T
Q  196 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||| || || ||| ||||||| ||||||||||||| |||||| ||||||||||    
T  6765998 taaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgtttta 6765944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 40584562 - 40584436
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||  ||    
T  40584562 ttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccat 40584463  T
Q  197 aaaacttttttcaaagaaaacacaaaa 223  Q
    ||||||| ||  |||||||||||||||    
T  40584462 aaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 33677479 - 33677636
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||| ||| |||||||||||||| | ||||  ||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  33677479 ttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 33677578  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||  |  ||| |||||| |||||||||| || |||||| ||||||||||||||    
T  33677579 aaaacttagtaaaaaaaaaacataaaaaactattcttcaaatttttatgttttagttt 33677636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 5963197 - 5963353
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||| |||||| |||||||||| ||  ||    
T  5963197 ttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tcccat 5963295  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| ||  ||||||||||||||||| || |||| |||||||||| |||||||||    
T  5963296 aaaacttattctaaagaaaacacaaaaaattagactctaaattcttatattttagttt 5963353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 30830760 - 30830607
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | ||||||||| || |||| ||||| ||||||||| || |||||| ||||||| ||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcat 30830661  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
     |||||| ||||||| ||||||||||||   ||||||||| |||||||||||||    
T  30830660 gaaacttatttcaaaaaaaacacaaaaagacatactccaatttcttatgtttta 30830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 35115943 - 35115811
Alignment:
Q  122 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt-ttttcaaagaaaacaca 220  Q
    ||||||||||||||| || |||| |||||| ||||||||||||| | |||||||||||||||||||||||  |||||||||| ||   ||| ||||||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacaca 35115844  T
Q  221 aaaaactatactccaaattcttatgttttagtt 253  Q
    |||||||||||||||||||||||||||||||||    
T  35115843 aaaaactatactccaaattcttatgttttagtt 35115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 7645394 - 7645234
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt---cattttttccataaccaatagccaatgaaaattgtttttacatcttct 193  Q
    |||||||||| |||||||||||||||||||||||||||||||| |  ||   |||||| |||||||  ||||||||||||||||||||||||||| |||     
T  7645394 ttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgttcc 7645295  T
Q  194 tataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     || ||| || ||  || |||||||||||| | ||||||||||||||||||||||||||||    
T  7645294 catgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgttttagttt 7645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 35022897 - 35023051
Alignment:
Q  101 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaata--gccaatgaaaattgtttttacatcttcttataa 198  Q
    |||||| ||||||||||||||||  |||||||||||||| |||  |||||| ||| ||| |||||  || |||||||||||||||||||||||| ||| |    
T  35022897 tctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatga 35022996  T
Q  199 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||  | |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35022997 aacttactccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttt 35023051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 43415468 - 43415554
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 43415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 44454987 - 44455142
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||||||||||  || |||| |||||| || |||| ||||||||||||  |||| ||||||| | |||  ||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatg--aattttttttacgttttcccat 44455084  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||  ||| |||||||||||||||||||||||||||| ||| |||||||||    
T  44455085 gaaacttattcaaaataaaacacaaaaaactatactccaaattcatatattttagttt 44455142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 26998323 - 26998445
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  26998323 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 26998422  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    | ||||| |||||||||||||||    
T  26998423 ttaaagataacacaaaaaactat 26998445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 30421346 - 30421236
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  | ||  ||||  | || ||||||||||||||||||||||||    
T  30421346 ttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatcttcttat 30421247  T
Q  197 aaaactttttt 207  Q
    |||||||||||    
T  30421246 aaaactttttt 30421236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 40808853 - 40808727
Alignment:
Q  125 cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaa 224  Q
    |||| ||||||||||  |||| ||||||||| |||||||| || ||||||||||||||||||||||||  || |||||| || |||||||||||||||||    
T  40808853 catttaattttctct--cttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaa 40808757  T
Q  225 actatactccaaattcttatgttttagttt 254  Q
    ||||| || |||||||||||| ||||||||    
T  40808756 actatgctacaaattcttatgctttagttt 40808727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 32010108 - 32010231
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||| ||||| |||| | ||||||||| || |||| |||   |||||||||||| ||||||||||||| |||||||||| ||    
T  32010108 aaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 32010207  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    ||||||| ||||||||||||||||    
T  32010208 tcaaagataacacaaaaaactata 32010231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 32273677 - 32273799
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||| |||||| |||||||||| ||    
T  32273677 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatt 32273776  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  32273777 tcaaagataacacaaaaaactat 32273799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 9709526 - 9709641
Alignment:
Q  114 aatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaaga 213  Q
    |||||||||| ||||||||||  ||| ||||||||||| || |||| ||||| | ||||||||||||||| |||||||| |||||||||| |||||| ||    
T  9709526 aatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaagga 9709625  T
Q  214 aaacacaaaaaactat 229  Q
     ||||||| |||||||    
T  9709626 taacacaagaaactat 9709641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 38071002 - 38071123
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| | |||||||| ||    
T  38071002 aaaattaaatgtaaagtgcattcaatttgctctat-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatt 38071100  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  38071101 tcaaagataacacaaaaaactat 38071123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 39696963 - 39696877
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttt 183  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||| |||||| || || | ||||||| |||||||||||||||    
T  39696963 ttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 4707419 - 4707558
Alignment:
Q  99 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 198  Q
    |||||| |||||||||||| ||||| |||||||| | ||| | || || ||||||| || |  |||| ||||||||||||||||| ||||||||   | |    
T  4707419 attctcgtaaaattaaatgtaaattgcattcaatgtgctcctcctctccttttttctatgatgaataaccaatgaaaattgttttaacatcttcccgtta 4707518  T
Q  199 aacttttttcaaagaaaacacaaaaaactatactccaaat 238  Q
    ||||| ||  || |||||||||||||||||||||||||||    
T  4707519 aacttattctaaggaaaacacaaaaaactatactccaaat 4707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 4891793 - 4891675
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||| | |||| | ||||||||| |  |||| |||   ||||| |||||||||||||||||||| |||||||||| ||    
T  4891793 aaaattaaatgtaaagtgcattcaatctgctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatt 4891694  T
Q  207 tcaaagaaaacacaaaaaa 225  Q
    ||||||| |||||||||||    
T  4891693 tcaaagataacacaaaaaa 4891675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 5280642 - 5280592
Alignment:
Q  126 attcaattttctctttctttcattttttccataaccaatagccaatgaaaa 176  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5280642 attcaattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 20380129 - 20380251
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||  || ||||||||| ||| |||||||||| ||    
T  20380129 aaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatt 20380228  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  20380229 tcaaagataacacaaaaaactat 20380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 44442137 - 44442285
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||    ||||||||||||||||||||||||| ||||||| || ||    
T  44442137 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaatttatt 44442236  T
Q  207 tcaaagaaaacacaaa-aaactatactccaaattcttatgttttagttt 254  Q
    | ||| | |||||||| |||||||  | |||| | ||||||||||||||    
T  44442237 ttaaaaataacacaaataaactatgttacaaactattatgttttagttt 44442285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 8032823 - 8032726
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttc-tttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 203  Q
    ||||||||||||||| | |||||||||| |||| || ||||||||| || ||||| |  | ||||| |||||||||||||||||||| ||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaactt 8032726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 11031077 - 11030962
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||||||       ||||||||||||| |||||  |||||||||| ||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaata-------aaaattgtttttatatctttctataaaacttatt 11030985  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    | ||||| || |||| |||||||    
T  11030984 ttaaagataagacaagaaactat 11030962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 5280595 - 5280537
Alignment:
Q  197 aaaacttttttcaaagaaaacacaaaaaa-ctatactccaaattcttatgttttagttt 254  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||    
T  5280595 aaaactttttcccaagaaaacacaaaaaaactatagtccaaattcttatgttttagttt 5280537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 16495019 - 16494974
Alignment:
Q  168 caatgaaaattgtttttacatcttcttataaaacttttttcaaaga 213  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  16495019 caatgaaaattgtttttacatcttcctataaaacttatttcaaaga 16494974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 19264008 - 19264045
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19264008 gtcccaaaatataagcaaaaaagacaaacttttatctt 19264045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 32428019 - 32428127
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt-tcaaagaaaacacaaaaaactatactccaaattcttatg 245  Q
    ||||| ||| ||| |||||| ||||||||||| ||||||||| ||   || |||||| || | ||| ||||||| ||  |||||||||||||||||||||    
T  32428019 attttctccgtaatcaatagtcaatgaaaattatttttacatgtttccatgaaacttattataaaaaaaaacaccaaggactatactccaaattcttatg 32428118  T
Q  246 ttttagttt 254  Q
    |||||||||    
T  32428119 ttttagttt 32428127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 3201276 - 3201314
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttatctttt 80  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3201276 tcccaaaatataagcaaaaaagacaaactattatctttt 3201314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 18834065 - 18833980
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||  | || ||||||| |||||||||||||||||    
T  18834065 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctt 18833980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 5280732 - 5280697
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||||||| |||||||    
T  5280732 gtcccaaaatataagcaaaaaagacaaatttttatc 5280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 33198886 - 33198851
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||||||||| |||||||    
T  33198886 gtcccaaaatataagcaaaaaagacaaaattttatc 33198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 38070924 - 38070959
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||| |||||||||||||||||||||||||||    
T  38070924 gtcccaaattataagcaaaaaagacaaacttttatc 38070959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 45660271 - 45660306
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||||||||||| |||||||||||||    
T  45660271 gtcccaaaatataagcaaaaaaaacaaacttttatc 45660306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 25571953 - 25571987
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||| ||||||||||||    
T  25571953 gtcccaaaatataagcaaaaaaaacaaacttttat 25571987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 29524292 - 29524258
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    ||||||||||||||| |||||||||||||||||||    
T  29524292 gtcccaaaatataagtaaaaaagacaaacttttat 29524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 40808964 - 40808930
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||| ||||||    
T  40808964 gtcccaaaatataagcaaaaaagacaaatttttat 40808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 148; Significance: 8e-78; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 77897 - 78110
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||| |||||||||||||||||| |||    
T  77897 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgtaaattacattcaattttcactt 77996  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  77997 tctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactatactctaaattc 78096  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  78097 ttatgttttagttt 78110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 8e-78; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 23311773 - 23311560
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||| |||||||||||||||| |||           |||||||||||||||||||||| | ||||||||||||||||||||    
T  23311773 gtcccaaaatataagcaaaaaagtcaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgtatattacattcaattttctctt 23311674  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||     
T  23311673 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactatactctaaattt 23311574  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  23311573 ttatgttttagttt 23311560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 37042597 - 37042384
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  37042597 gtcccaaaatataaggaaaaaagacaaattttaatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 37042498  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||     
T  37042497 tctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaaactatactccaaattt 37042398  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  37042397 ttatgttttagttt 37042384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 11054488 - 11054278
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  11054488 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 11054389  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt-caaagaaaacacaaaaaactatactccaaatt 239  Q
    ||    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  11054388 tc----attttttccataaccaatagccaatgaaaattgtttttaaatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaatt 11054293  T
Q  240 cttatgttttagttt 254  Q
    ||||| |||||||||    
T  11054292 cttatattttagttt 11054278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 30189569 - 30189724
Alignment:
Q  96 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctt 194  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  30189569 gttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcct 30189668  T
Q  195 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30189669 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 30189724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 14752332 - 14752175
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  14752332 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  14752232 aaatttttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 14752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 28875406 - 28875563
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28875406 ttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 28875505  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  28875506 aaaactttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttt 28875563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 7866607 - 7866450
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7866607 ttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttat 7866508  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  7866507 aaaacttttttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttt 7866450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 50651161 - 50651004
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  50651061 aaaactttttgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttt 50651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 36546486 - 36546699
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||| |||||| |||            |||||||||||||||||||||||||||||||| |||| |||||     
T  36546486 gtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacattaaattctctctc 36546585  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||| |||||||||||||||| |||||     
T  36546586 tctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaattt 36546685  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  36546686 ttatgttttagttt 36546699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 36561829 - 36561616
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||||||||||||||||||||| |||||| |||            |||||||||||||||||||||||||||||||| |||| |||||     
T  36561829 gtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacattaaattctctctc 36561730  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||| |||||||||||||||| |||||     
T  36561729 tctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaattt 36561630  T
Q  241 ttatgttttagttt 254  Q
    ||||||||||||||    
T  36561629 ttatgttttagttt 36561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 6438083 - 6438229
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  6438083 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6438182  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||    
T  6438183 aaagcttttttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 47864191 - 47864348
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||    
T  47864191 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctat 47864290  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  47864291 aaaacttttttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttt 47864348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 35963152 - 35963309
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||| ||||||| |||    
T  35963152 ttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctat 35963251  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  35963252 aaaactttttccaaacaaaacacaaaaaactatactccaaattcttatgttttagttt 35963309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 46711781 - 46711625
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  46711781 ttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctat 46711683  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  46711682 aaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttt 46711625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 579258 - 579112
Alignment:
Q  101 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  579258 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctataaaa 579159  T
Q  201 cttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||    
T  579158 cttttttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttt 579112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 6075081 - 6075238
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||| | |    
T  6075081 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcctgt 6075180  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    || ||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  6075181 aacactttttccaaagaaaacacaaaaaattatactccaaattcttatactttagttt 6075238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 37074958 - 37075117
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaatagccaatgaaaattgtttttacatcttctt 194  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||||||| ||||||||||||||||||||||||| ||||||||||| |    
T  37074958 ttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcct 37075057  T
Q  195 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  37075058 ataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 37075117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 97 - 248
Target Start/End: Original strand, 53270233 - 53270386
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttct--ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctt 194  Q
    |||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||| ||||| ||||||  |    
T  53270233 ttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttct 53270332  T
Q  195 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttt 248  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53270333 atgaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttt 53270386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 54465019 - 54464863
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  54465019 ttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat 54464920  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     ||  |||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  54464919 -aatttttttttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 54464863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 19464075 - 19464234
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||| | ||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||   ||||||||||||||||  |||||| |||    
T  19464075 ttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctat 19464174  T
Q  197 aaaacttttttcaaagaaaacacaaaaaac--tatactccaaattcttatgttttagttt 254  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19464175 aaaacttttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttt 19464234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 32619954 - 32619804
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |  || ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  32619954 ttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttcttat 32619855  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtt 247  Q
    ||||| | || |||||||||||||||| | ||||||||||||||| |||||    
T  32619854 aaaacctattccaaagaaaacacaaaatattatactccaaattctcatgtt 32619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 50730109 - 50730266
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| |  || ||||||||||||| |||    
T  50730109 ttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50730207  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50730208 aaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttt 50730266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 50782745 - 50782588
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| |  || ||||||||||||| |||    
T  50782745 ttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50782647  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50782646 aaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttt 50782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 2927289 - 2927447
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||||| |||||||||||||  ||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccat 2927388  T
Q  197 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| || ||||||||| || |||||||||| || |||||||||||||||||||||    
T  2927389 aaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttt 2927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 41476453 - 41476308
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||| ||       ||||||||||||| ||||||||||||  |||    
T  41476453 ttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttcccta-------gccaatgaaaattatttttacatctttctat 41476361  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41476360 aaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttt 41476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 8703109 - 8703262
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||| ||||||||||||||||||| |||    
T  8703109 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 8703206  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     ||| ||||||| || || |||| ||||||||||||||||||||||||||||||||||    
T  8703207 -aaatttttttccaaaaacacac-aaaaactatactccaaattcttatgttttagttt 8703262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 9054996 - 9055149
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||| ||||||||||||||||||| |||    
T  9054996 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 9055093  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     ||| ||||||| || || |||| ||||||||||||||||||||||||||||||||||    
T  9055094 -aaatttttttccaaaaacacac-aaaaactatactccaaattcttatgttttagttt 9055149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 26208014 - 26208171
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||| |||||| |||| ||  ||||||||||||||||||||||||||||||   ||    
T  26208014 ttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccat 26208113  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || || | ||||||||||||||||||||| ||||||||||||||||||||    
T  26208114 gaaacttattccagacaaaacacaaaaaactatactctaaattcttatgttttagttt 26208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 26725115 - 26724958
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||| |||||||||||||||| |||| ||| ||||  ||||| ||||||| ||||| ||||||||||||||||||||||||||| |     
T  26725115 ttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcag 26725016  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| || |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  26725015 aaaacttattccaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 26724958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 98 - 250
Target Start/End: Complemental strand, 20847391 - 20847240
Alignment:
Q  98 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 197  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||| ||||  ||||||||||||||||  |||||||| |||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  198 aaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 250  Q
    |||||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  20847291 aaacttattccaaagaaaacaca-aaaattatactccaaattcttatgtttta 20847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 29235193 - 29235344
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||| |||| |||||||||| ||||||||||||||      | |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  29235193 ttattatcattaaattaaatgtaaattacattcaat------tctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 29235286  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||| ||||  |||||||| |||||||||||||||| ||||||||||||||||||||    
T  29235287 taaacgttttctaaagaaaatacaaaaaactatactctaaattcttatgttttagttt 29235344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 9264610 - 9264708
Alignment:
Q  156 ataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagttt 9264708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 34722724 - 34722623
Alignment:
Q  102 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 201  Q
    |||||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaac 34722625  T
Q  202 tt 203  Q
    ||    
T  34722624 tt 34722623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 41 - 250
Target Start/End: Complemental strand, 23910675 - 23910484
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||||||| ||||||||||| |||            ||||||||||| ||||||||||||||||||||||||            
T  23910675 gtcccaaaatataagcaaaaaagacaaatttttatctttttcaagattttttttgtttattctcatataattaaatgcaaattacattcaat-------- 23910584  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
              |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  23910583 ----------tttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctatactctaaattc 23910494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 31836966 - 31837076
Alignment:
Q  144 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 243  Q
    |||||||| |||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  31836966 ttcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttctta 31837065  T
Q  244 tgttttagttt 254  Q
    |||||||||||    
T  31837066 tgttttagttt 31837076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 3972275 - 3972402
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | ||||||||||| ||||||||||||||||||||||||  ||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  197 aaaacttttttcaaagaaaacacaaaaaa 225  Q
    ||||| || ||||||||||||||||||||    
T  3972375 aaaac-ttattcaaagaaaacacaaaaaa 3972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 3997603 - 3997476
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | ||||||||||| ||||||||||||||||||||||||  ||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  197 aaaacttttttcaaagaaaacacaaaaaa 225  Q
    ||||| || ||||||||||||||||||||    
T  3997503 aaaac-ttattcaaagaaaacacaaaaaa 3997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 8097132 - 8096985
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||| ||||| |||||||||||| ||||||||||||| |||||||||| ||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  8097032 tcaaggataacacaagaaactatgttgcaaactactatgttttagttt 8096985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 47115849 - 47116006
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||  ||||| |||| |||||||||||| || |||||| ||||||| ||||| |||| |||||||| |||||||||||   ||    
T  47115849 ttattctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattgcttttacatctttccat 47115948  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||  |||  |||||||||||| ||||||| ||||||||||||||||||||    
T  47115949 aaaatttattctaaaacaaacacaaaaaattatactctaaattcttatgttttagttt 47116006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 46557325 - 46557237
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttta 185  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 22479168 - 22479021
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||| ||||||||||||||| |||||||||| ||    
T  22479168 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatt 22479069  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  22479068 tcaaagataacacaaaaaactatgttacaaactactatgttttagttt 22479021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 30454838 - 30454692
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||| ||||| |||||||||||||||||||  |||||||||| ||    
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatt 30454740  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  30454739 tcaaggataacacaagaaactatgttgcaaactactatgttttagttt 30454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 6752670 - 6752764
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    ||||| |||| ||||||||||||||||||||||| ||| |||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  6752670 ttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 34194892 - 34194994
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||| ||| |||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 34194991  T
Q  207 tca 209  Q
    |||    
T  34194992 tca 34194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 16033094 - 16032981
Alignment:
Q  114 aatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaaga 213  Q
    |||||||| | |||||||||| || | |||||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||| |||||| ||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaagga 16032995  T
Q  214 aaacacaaaaaact 227  Q
     ||||||| |||||    
T  16032994 taacacaagaaact 16032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 38401384 - 38401507
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| |||||| |||||||||| | ||||||||| || ||||  ||   |||||||||||| ||||||||||| | |||||||||| ||    
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatt 38401483  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    ||||||| ||||||||||||||||    
T  38401484 tcaaagataacacaaaaaactata 38401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 47867036 - 47866946
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 188  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| ||||||||||    
T  47867036 ttattctcataaa-ttaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacat 47866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 33974683 - 33974614
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatag 166  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  33974683 ttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 38674870 - 38674974
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||| | ||||| |||||| ||||||||||||||||||| | |||| ||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttacttattctcat 38674969  T
Q  197 aaaac 201  Q
    |||||    
T  38674970 aaaac 38674974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 10114915 - 10115062
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  10114915 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10115014  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| || |||||||| |||  | |||| |  |||||||||||||    
T  10115015 tcaaagataatacaaaaaattatgttacaaactactatgttttagttt 10115062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 22456122 - 22455975
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| |||||| |||||||||| ||    
T  22456122 aaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatt 22456023  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||  |||||||||||||||  | |||| |  |||||||||||||    
T  22456022 tcaaagttaacacaaaaaactatgttacaaactactatgttttagttt 22455975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 7886731 - 7886609
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||| ||||||||| | |||||||||| |||| ||||||||||| || ||||| |||| |||||||||||||||||||||||||  ||||||| || ||    
T  7886731 aaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatt 7886632  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||  | ||||||| |||||||    
T  7886631 tcaagaataacacaagaaactat 7886609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 21214245 - 21214367
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||||||  |||||||||| ||    
T  21214245 aaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatt 21214344  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||| | |||||||||||||||    
T  21214345 tcaaaaataacacaaaaaactat 21214367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 46918327 - 46918205
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    |||||||| |||||| | ||||| |||| | || ||||||||||| || |||||||||| ||||||||||||||||||| |||||| |||||||||| ||    
T  46918327 aaaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttatt 46918228  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    | || || ||||||| |||||||    
T  46918227 ttaaggataacacaagaaactat 46918205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 10252015 - 10252130
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  10252015 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10252114  T
Q  207 tcaaagaaaacacaaa 222  Q
    ||||||| || |||||    
T  10252115 tcaaagataatacaaa 10252130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 47444087 - 47443941
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||   ||| |||||||||||||||||||||| ||||||| || ||    
T  47444087 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatcttc-tataaaatttatt 47443989  T
Q  207 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  47443988 tcaaagataacacaaaaaactatgttacaaactaatatgttttagttt 47443941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 254
Target Start/End: Complemental strand, 33973627 - 33973533
Alignment:
Q  161 caatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||| |||||||| |||| || ||||  |||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||    
T  33973627 caatagccactgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttt 33973533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 48802604 - 48802548
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 153  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  48802604 ttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttttt 48802548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 10014273 - 10014388
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||| ||||| | |||||||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  10014273 aaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10014372  T
Q  207 tcaaagaaaacacaaa 222  Q
    ||||||| || |||||    
T  10014373 tcaaagataatacaaa 10014388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 3084256 - 3084147
Alignment:
Q  145 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    ||||||| |||||||| |||| |||||||| |||||||||||||||||  ||||||||  ||| || ||  |||||| ||| |||||| |||||||| ||    
T  3084256 tcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaagaaattatacttcaaattctcat 3084157  T
Q  245 gttttagttt 254  Q
     |||||||||    
T  3084156 attttagttt 3084147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 31126214 - 31126339
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| ||||||||||||   ||||||||| |    
T  31126214 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttat 31126313  T
Q  206 ttcaaagaaaacacaaaaaactatac 231  Q
    ||||| || ||||||||||| |||||    
T  31126314 ttcaaggagaacacaaaaaattatac 31126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 8769651 - 8769546
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 246  Q
    ||||| ||||||| || |||||||| |||||| |||||||| ||||  || || ||||||  ||| ||||||| |||||||||||||| |||| ||||||    
T  8769651 attttctccataatcattagccaataaaaattatttttacaacttcccatgaatcttttt--aaaaaaaacaccaaaaactatactcctaattgttatgt 8769554  T
Q  247 tttagttt 254  Q
    ||||||||    
T  8769553 tttagttt 8769546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 9264008 - 9264071
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataac 160  Q
    |||||||||||||||||||||||||||||||  |||||| ||| ||||||||||| ||| ||||    
T  9264008 ttattctcataaaattaaatgcaaattacatctaattttatctctctttcattttctccgtaac 9264071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 2994532 - 2994407
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat----cttcttataaaact 202  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||| ||||||||    |||| |||||||||    
T  2994532 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg-ttttacatcttccttcctataaaact 2994434  T
Q  203 tttttcaaagaaaacacaaaaaactat 229  Q
    | ||||||  | |||||||||||||||    
T  2994433 tatttcaagcataacacaaaaaactat 2994407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 8764744 - 8764646
Alignment:
Q  154 ccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtt 253  Q
    |||||| || |||||||| |||||| |||||||| ||||  || ||  |||||| ||| |||||||||||| ||||||||| |||| |||||||||||||    
T  8764744 ccataatcattagccaataaaaattatttttacaacttcccatgaa--tttttttaaaaaaaacacaaaaagctatactcctaattgttatgttttagtt 8764647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 14752419 - 14752382
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14752419 gtcccaaaatataagcaaaaaagacaaacttttatctt 14752382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 48291826 - 48291931
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||||||  ||| |||   |||||||||||| |||||||| |||| |||||||||| ||    
T  48291826 aaaattaaatggaaagtgcattcaatttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctataaaacttatt 48291925  T
Q  207 tcaaag 212  Q
    | ||||    
T  48291926 ttaaag 48291931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 51426621 - 51426706
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    || |||||||||||| ||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 51426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 6784390 - 6784450
Alignment:
Q  169 aatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 229  Q
    |||||||||| ||||||||||||| ||||||| || ||| ||||| |||||||||||||||    
T  6784390 aatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaactat 6784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  102 ctcataaaattaaatgcaaattacattcaattttct 137  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 25242227 - 25242145
Alignment:
Q  172 gaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||||| ||||||  |||||||||| ||| ||||| |||||||||||||||  | |||| |  |||||||||||||    
T  25242227 gaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatgttttagttt 25242145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 54725670 - 54725628
Alignment:
Q  161 caatagccaatgaaaattgtttttacatcttcttataaaactt 203  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  54725670 caataaccaatgaaaattgtttttacatcttcctataaaactt 54725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 17587779 - 17587856
Alignment:
Q  177 ttgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||||||||| |||||||||| ||||||  | |||| || |||||||| | ||||||  |||||||||||||    
T  17587779 ttgtttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgttttagttt 17587856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 41936313 - 41936248
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 164  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 41936248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 1335112 - 1335231
Alignment:
Q  106 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 205  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||| |||||| ||||||||||||   || |||||| |    
T  1335112 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattatttttacatctttccatgaaacttat 1335211  T
Q  206 ttcaaagaaaacacaaaaaa 225  Q
    | ||| || |||||||||||    
T  1335212 tccaaggagaacacaaaaaa 1335231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 6074995 - 6075030
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6074995 gtcccaaaatataagcaaaaaagacaaacatttatc 6075030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 7866694 - 7866659
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||||||||| |||||||||||||||||||||    
T  7866694 gtcccaaaatataaacaaaaaagacaaacttttatc 7866659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 8769683 - 8769644
Alignment:
Q  99 attctcataaaattaaatgcaaattacattcaattttctc 138  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  8769683 attctcattaaattaaatgcaaattacgttcaattttctc 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 22479246 - 22479211
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    |||||||| |||||||||||||||||||||||||||    
T  22479246 gtcccaaattataagcaaaaaagacaaacttttatc 22479211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 30612221 - 30612304
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactata 230  Q
    ||||||||||||| || || ||||||| |||||||||||||||||  ||| |||||  ||| ||||| |||| |||||| ||||    
T  30612221 attttttccataatcattaaccaatgagaattgtttttacatctttctatgaaactcattttaaagagaacataaaaaattata 30612304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 37074871 - 37074906
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37074871 gtcccgaaatataagcaaaaaagacaaacttttatc 37074906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 23209393 - 23209291
Alignment:
Q  108 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 207  Q
    |||||||||||||||| |||||| | |  |||  |||||||||| ||  |||| |||| ||||| |||||| ||||| ||||||  |||||||||| |||    
T  23209393 aaattaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttattt 23209294  T
Q  208 caa 210  Q
    |||    
T  23209293 caa 23209291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 31292664 - 31292762
Alignment:
Q  156 ataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||| |||| ||||||||||||||||||||||||||  ||| ||||  || ||| || |||| || ||| |||||| ||||||   ||||||||||||    
T  31292664 ataacaaataaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttt 31292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 36509582 - 36509540
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctct 139  Q
    |||||||||| |||||||||| ||||||||||| |||||||||    
T  36509582 ttattctcatcaaattaaatgtaaattacattcgattttctct 36509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 45868582 - 45868536
Alignment:
Q  145 tcattttttccataaccaatagccaatgaaaattgtttttacatctt 191  Q
    ||||||| ||| |||| |||| |||||||||||||||||||||||||    
T  45868582 tcattttctccgtaacaaataaccaatgaaaattgtttttacatctt 45868536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 75
Target Start/End: Original strand, 2927206 - 2927235
Alignment:
Q  46 aaaatataagcaaaaaagacaaacttttat 75  Q
    ||||||||||||||||||||||||||||||    
T  2927206 aaaatataagcaaaaaagacaaacttttat 2927235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 8764783 - 8764746
Alignment:
Q  99 attctcataaaattaaatgcaaattacattcaattttc 136  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8764783 attctcattaaattaaatgcaaattacgttcaattttc 8764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 19463988 - 19464021
Alignment:
Q  42 tcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||| |||||||||||||||||    
T  19463988 tcccaaaatataagcagaaaagacaaacttttat 19464021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 28875319 - 28875356
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatctt 78  Q
    |||||||||||||||||||||| | |||||||||||||    
T  28875319 gtcccaaaatataagcaaaaaatataaacttttatctt 28875356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 2878213 - 2878253
Alignment:
Q  208 caaagaaaacacaaaaaactatactccaaattcttatgttt 248  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  2878213 caaagataacacaaaaaactatattctaaattcttatgttt 2878253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 33974766 - 33974738
Alignment:
Q  45 caaaatataagcaaaaaagacaaactttt 73  Q
    |||||||||||||||||||||||||||||    
T  33974766 caaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 34022662 - 34022726
Alignment:
Q  167 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatac 231  Q
    ||||||| |||| ||||||||||||   ||||||||| |||||| || ||||||||||| |||||    
T  34022662 ccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattatac 34022726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 47866921 - 47866893
Alignment:
Q  224 aactatactccaaattcttatgttttagt 252  Q
    |||||||||||||||||||||||||||||    
T  47866921 aactatactccaaattcttatgttttagt 47866893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 133; Significance: 7e-69; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 41 - 243
Target Start/End: Complemental strand, 3649 - 3447
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    |||||||||||||||||||||||| |||||||||||||||| ||            ||||||||||| |||||||||||||||||||||||||||||||     
T  3649 gtcccaaaatataagcaaaaaagataaacttttatcttttctaagattgttgttgtttattctcatacaattaaatgcaaattacattcaattttctctc 3550  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  3549 tctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaaactatactccaaattc 3450  T
Q  241 tta 243  Q
    |||    
T  3449 tta 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 128; Significance: 7e-66; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 9985 - 10194
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 140  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||            ||||||||||| |||||||||||||||||||||||||||||||     
T  9985 gtcccaaaatataagtaaaaaaggcaaacttttatcttttctaagattttttttgtttattctcatacaattaaatgcaaattacattcaattttctctc 10084  T
Q  141 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 240  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| | |||||||||    
T  10085 tctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaaactacattccaaattc 10184  T
Q  241 ttatgtttta 250  Q
    ||||||||||    
T  10185 ttatgtttta 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 45 - 254
Target Start/End: Original strand, 154805 - 155013
Alignment:
Q  45 caaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctt 144  Q
    ||||||||||| |||||||| ||||||||||||||| |||            |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  154805 caaaatataagtaaaaaagataaacttttatctttttcaagattttttttttttattctcataaaattaaatgcaaattacattaaattttctctatctt 154904  T
Q  145 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| || |||||||||| | || ||||||||    
T  154905 tcattttttccataaccaatagccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatac-aaaaactatatttcagattcttat 155003  T
Q  245 gttttagttt 254  Q
    ||||||||||    
T  155004 gttttagttt 155013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 44936 - 44779
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||    
T  44936 ttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcctat 44837  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  44836 aaaactttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttt 44779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 106; Significance: 1e-52; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 1008 - 1165
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||| ||||||||||||||  |||    
T  1008 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 1107  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||    
T  1108 aaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagttt 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 8968 - 9125
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||| ||||||||||||||  |||    
T  8968 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 9067  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||    
T  9068 aaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagttt 9125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 921 - 956
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  921 gtcccaaaatataagcaaaaaagacaaacttttatc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 8881 - 8916
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttatc 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  8881 gtcccaaaatataagcaaaaaagacaaacttttatc 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 157790 - 157947
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |  ||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccat 157889  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  157890 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 157947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 52767 - 52676
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 188  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||| ||||  ||||| ||||||| |||||| |||||||||||||||||||||    
T  52767 ttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 157703 - 157737
Alignment:
Q  41 gtcccaaaatataagcaaaaaagacaaacttttat 75  Q
    |||||||||||||||||||||||||||||||||||    
T  157703 gtcccaaaatataagcaaaaaagacaaacttttat 157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 40175 - 40321
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||| ||||||| || | ||||||||| |||||||||||||||||||||||||||||||| |||  |||    
T  40175 ttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctat 40274  T
Q  197 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 244  Q
    |||| || || ||||||||||||||||| ||||||| |||||||||||    
T  40275 aaaatttattccaaagaaaacacaaaaagctatact-caaattcttat 40321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 160246 - 160376
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||  ||    
T  160246 ttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccat 160345  T
Q  197 aaaacttttttcaaagaaaacacaaaaaact 227  Q
     ||  || || ||||||||||||||||||||    
T  160346 gaattttattccaaagaaaacacaaaaaact 160376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 6030 - 5907
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||    ||| ||||||||||||||||||||| |||||||||| ||    
T  6030 aaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatt 5931  T
Q  207 tcaaagaaaacacaaaaaactata 230  Q
    |||| || ||||||||||||||||    
T  5930 tcaatgataacacaaaaaactata 5907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 233652 - 233495
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 196  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | |||||||||||||| |||||||||||||||  ||    
T  233652 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 233554  T
Q  197 aaaacttttttcaaag-aaaacacaaaaaactatactccaaattcttatgttttagttt 254  Q
     |||||| ||| |||| |||||||||| |||||||    |||||||||| |||||||||    
T  233553 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttt 233495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 161053 - 160952
Alignment:
Q  128 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaact 227  Q
    ||||||| |||||||||||||||| || ||||| |||| ||||||||||||||||||||| |||  ||| |||||| |||||| || ||||||| |||||    
T  161053 tcaatttgctctttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaact 160954  T
Q  228 at 229  Q
    ||    
T  160953 at 160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 3174 - 3296
Alignment:
Q  107 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 206  Q
    ||||||| ||||||| | ||||||||||  | | | ||||||||| || |||| |||   |||||| |||||||||||| |||||| |||||||||| ||    
T  3174 aaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatt 3273  T
Q  207 tcaaagaaaacacaaaaaactat 229  Q
    ||||||| |||||||||||||||    
T  3274 tcaaagataacacaaaaaactat 3296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 893 - 963
Alignment:
Q  147 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaac 217  Q
    ||||| |||||||||||||| ||||||||||| |||||| |||||  |||||||||| || ||||||||||    
T  893 attttctccataaccaatagtcaatgaaaattatttttatatctttctataaaacttattccaaagaaaac 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 860 - 900
Alignment:
Q  97 ttattctcataaaattaaatgcaaattacattcaattttctc 138  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  860 ttattctcatgaaattaaatgcaaattacatt-aattttctc 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 1772 - 1690
Alignment:
Q  157 taaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 239  Q
    |||| |||| |||||||||| |||||||||||||||  || |||||  || ||| |||||||||| ||| |||| ||||||||    
T  1772 taacaaataaccaatgaaaaatgtttttacatcttcccatgaaactaattccaaggaaaacacaataaattataatccaaatt 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University