View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1306_low_44 (Length: 231)

Name: NF1306_low_44
Description: NF1306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1306_low_44
NF1306_low_44
[»] chr5 (27 HSPs)
chr5 (1-112)||(36154602-36154713)
chr5 (1-112)||(11581019-11581130)
chr5 (1-148)||(25421732-25421879)
chr5 (1-148)||(13095694-13095841)
chr5 (1-148)||(9078152-9078299)
chr5 (8-106)||(22144292-22144390)
chr5 (1-142)||(1096673-1096814)
chr5 (1-148)||(24493768-24493915)
chr5 (1-148)||(13025510-13025657)
chr5 (1-148)||(25431594-25431741)
chr5 (1-148)||(24529420-24529567)
chr5 (1-148)||(21985921-21986068)
chr5 (61-148)||(23390330-23390417)
chr5 (2-141)||(8286618-8286756)
chr5 (64-148)||(22107210-22107294)
chr5 (1-148)||(21292745-21292891)
chr5 (63-148)||(22075219-22075304)
chr5 (8-99)||(21329276-21329369)
chr5 (1-38)||(22075328-22075365)
chr5 (1-83)||(5888949-5889033)
chr5 (1-83)||(29324995-29325078)
chr5 (66-113)||(22120033-22120080)
chr5 (1-34)||(20026713-20026746)
chr5 (1-33)||(22959307-22959339)
chr5 (69-113)||(24767180-24767224)
chr5 (1-33)||(25744036-25744068)
chr5 (63-111)||(26740482-26740530)
[»] chr3 (26 HSPs)
chr3 (1-148)||(14576607-14576754)
chr3 (1-148)||(14572788-14572935)
chr3 (1-147)||(40213495-40213641)
chr3 (1-109)||(17248060-17248168)
chr3 (1-112)||(53070472-53070583)
chr3 (1-148)||(25476159-25476306)
chr3 (1-148)||(11424537-11424684)
chr3 (1-148)||(17488056-17488203)
chr3 (2-148)||(18438734-18438880)
chr3 (1-162)||(20698211-20698371)
chr3 (1-148)||(42386611-42386758)
chr3 (1-145)||(14973057-14973201)
chr3 (2-148)||(13442474-13442619)
chr3 (1-148)||(23083136-23083282)
chr3 (8-113)||(52523508-52523613)
chr3 (8-101)||(2050980-2051073)
chr3 (1-148)||(26687087-26687233)
chr3 (61-148)||(17499538-17499625)
chr3 (48-112)||(23274924-23274988)
chr3 (61-148)||(30030039-30030126)
chr3 (69-119)||(12339980-12340030)
chr3 (63-148)||(43841132-43841217)
chr3 (64-148)||(16796747-16796831)
chr3 (1-38)||(12399515-12399552)
chr3 (68-113)||(14668994-14669039)
chr3 (1-33)||(13210101-13210133)
[»] chr7 (29 HSPs)
chr7 (7-112)||(17061740-17061845)
chr7 (1-148)||(38227680-38227827)
chr7 (7-112)||(12756496-12756601)
chr7 (8-109)||(2279899-2280000)
chr7 (8-113)||(12255572-12255677)
chr7 (1-148)||(9509389-9509535)
chr7 (1-112)||(44116741-44116852)
chr7 (1-147)||(15143811-15143957)
chr7 (1-142)||(3564138-3564279)
chr7 (63-148)||(12699032-12699117)
chr7 (1-148)||(10589238-10589384)
chr7 (1-148)||(40443589-40443735)
chr7 (1-148)||(26212196-26212342)
chr7 (1-148)||(27847608-27847754)
chr7 (1-148)||(16386022-16386168)
chr7 (8-104)||(15008278-15008375)
chr7 (52-111)||(9033170-9033229)
chr7 (66-113)||(9751390-9751437)
chr7 (52-111)||(14036435-14036494)
chr7 (52-111)||(14044985-14045044)
chr7 (52-111)||(14346465-14346524)
chr7 (52-111)||(14355015-14355074)
chr7 (1-34)||(810903-810936)
chr7 (1-54)||(22073210-22073263)
chr7 (1-33)||(68061-68093)
chr7 (1-83)||(8776623-8776706)
chr7 (1-33)||(9389469-9389501)
chr7 (8-52)||(16056624-16056668)
chr7 (63-111)||(16091994-16092042)
[»] chr8 (30 HSPs)
chr8 (1-112)||(41598420-41598531)
chr8 (2-148)||(22626935-22627081)
chr8 (1-148)||(6759456-6759603)
chr8 (1-148)||(20536408-20536554)
chr8 (1-148)||(21923703-21923849)
chr8 (1-148)||(28648818-28648965)
chr8 (1-148)||(18818184-18818330)
chr8 (66-147)||(23648754-23648835)
chr8 (64-148)||(22875265-22875349)
chr8 (1-143)||(16092115-16092257)
chr8 (1-112)||(19801201-19801312)
chr8 (9-148)||(18879020-18879158)
chr8 (63-148)||(7372970-7373055)
chr8 (64-148)||(25362977-25363061)
chr8 (1-148)||(16199421-16199567)
chr8 (1-148)||(23406581-23406727)
chr8 (61-148)||(31971455-31971542)
chr8 (61-148)||(45130832-45130919)
chr8 (1-148)||(21918775-21918921)
chr8 (48-100)||(13507905-13507957)
chr8 (48-100)||(13597437-13597489)
chr8 (52-111)||(22963244-22963303)
chr8 (52-111)||(40492677-40492736)
chr8 (52-111)||(14103049-14103108)
chr8 (52-111)||(20533233-20533292)
chr8 (1-83)||(21415001-21415084)
chr8 (52-111)||(23668046-23668105)
chr8 (1-46)||(39834134-39834179)
chr8 (52-104)||(16799732-16799784)
chr8 (51-111)||(19154709-19154769)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-148)||(38960-39107)
[»] chr4 (32 HSPs)
chr4 (1-112)||(44102446-44102557)
chr4 (1-112)||(44928697-44928808)
chr4 (1-148)||(14038848-14038995)
chr4 (1-154)||(16377296-16377450)
chr4 (8-113)||(52242974-52243079)
chr4 (1-148)||(15091096-15091243)
chr4 (1-148)||(44053029-44053175)
chr4 (1-148)||(12902957-12903103)
chr4 (63-146)||(16239806-16239889)
chr4 (1-107)||(21815405-21815511)
chr4 (1-148)||(22636634-22636780)
chr4 (1-98)||(21815076-21815173)
chr4 (1-98)||(21818498-21818595)
chr4 (1-148)||(7893900-7894047)
chr4 (8-113)||(15464710-15464816)
chr4 (1-148)||(3096843-3096989)
chr4 (1-148)||(7089077-7089223)
chr4 (61-148)||(14053136-14053223)
chr4 (64-127)||(17047909-17047972)
chr4 (1-145)||(23374134-23374277)
chr4 (1-38)||(7799006-7799043)
chr4 (52-111)||(17333517-17333576)
chr4 (66-113)||(20157130-20157177)
chr4 (66-113)||(24028975-24029022)
chr4 (61-119)||(6190691-6190749)
chr4 (1-101)||(8846619-8846721)
chr4 (48-102)||(15868531-15868585)
chr4 (66-111)||(16043249-16043294)
chr4 (1-38)||(17047847-17047884)
chr4 (69-113)||(13812652-13812696)
chr4 (1-33)||(15099665-15099697)
chr4 (1-33)||(15190632-15190664)
[»] chr1 (21 HSPs)
chr1 (1-111)||(433244-433354)
chr1 (1-148)||(50209987-50210134)
chr1 (11-109)||(16758890-16758988)
chr1 (1-148)||(22354347-22354493)
chr1 (1-145)||(34509983-34510127)
chr1 (1-140)||(22532477-22532616)
chr1 (61-148)||(22356008-22356095)
chr1 (61-148)||(22357694-22357781)
chr1 (1-148)||(21026880-21027026)
chr1 (66-148)||(20135387-20135469)
chr1 (48-109)||(21342332-21342393)
chr1 (48-109)||(21347197-21347258)
chr1 (62-148)||(27250564-27250650)
chr1 (8-113)||(35260860-35260966)
chr1 (1-148)||(38801166-38801312)
chr1 (8-111)||(26065176-26065280)
chr1 (1-145)||(20846994-20847137)
chr1 (51-111)||(20346041-20346101)
chr1 (1-33)||(20637165-20637197)
chr1 (1-37)||(27250504-27250540)
chr1 (63-111)||(52940713-52940761)
[»] scaffold0413 (1 HSPs)
scaffold0413 (8-112)||(15396-15500)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-104)||(17024-17127)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-148)||(40112-40259)
[»] chr2 (19 HSPs)
chr2 (1-148)||(22737955-22738101)
chr2 (1-148)||(23286061-23286207)
chr2 (8-109)||(23708399-23708500)
chr2 (1-148)||(22337315-22337462)
chr2 (1-148)||(23076642-23076788)
chr2 (1-148)||(27753775-27753921)
chr2 (1-143)||(23660227-23660369)
chr2 (61-148)||(23654220-23654307)
chr2 (1-145)||(37891-38034)
chr2 (63-148)||(22731069-22731155)
chr2 (1-148)||(298589-298735)
chr2 (48-107)||(19672068-19672127)
chr2 (1-148)||(32451704-32451850)
chr2 (63-143)||(23060717-23060796)
chr2 (1-148)||(20309305-20309451)
chr2 (12-111)||(20519976-20520076)
chr2 (52-111)||(23287600-23287659)
chr2 (8-111)||(22412915-22413019)
chr2 (1-33)||(31756232-31756264)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-97)||(1851-1947)
[»] scaffold0056 (2 HSPs)
scaffold0056 (7-112)||(79109-79214)
scaffold0056 (1-147)||(16989-17135)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-112)||(225643-225744)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-148)||(23082-23229)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-145)||(25839-25983)
scaffold0122 (1-142)||(33269-33410)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-148)||(16374-16521)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-112)||(20199-20310)
[»] chr6 (23 HSPs)
chr6 (5-148)||(20593973-20594116)
chr6 (1-148)||(29060740-29060887)
chr6 (2-108)||(18456955-18457061)
chr6 (7-148)||(25629135-25629276)
chr6 (1-148)||(19303315-19303462)
chr6 (1-148)||(18409601-18409748)
chr6 (1-148)||(20638058-20638204)
chr6 (8-112)||(25644558-25644662)
chr6 (1-148)||(22831702-22831848)
chr6 (64-148)||(17287633-17287717)
chr6 (63-148)||(20360796-20360881)
chr6 (91-148)||(22780091-22780148)
chr6 (1-119)||(18821594-18821711)
chr6 (1-145)||(16920408-16920551)
chr6 (1-52)||(4667987-4668038)
chr6 (52-111)||(18696724-18696783)
chr6 (52-111)||(20224180-20224239)
chr6 (52-111)||(22118164-22118223)
chr6 (65-148)||(25603223-25603306)
chr6 (7-52)||(4189252-4189297)
chr6 (7-52)||(4674840-4674885)
chr6 (1-33)||(4185597-4185629)
chr6 (1-33)||(22080511-22080543)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-148)||(8675-8821)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-148)||(52113-52258)
scaffold0011 (1-145)||(167754-167897)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-145)||(39679-39823)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-145)||(74989-75133)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-112)||(12165-12276)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-148)||(20603-20749)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-148)||(13411-13557)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-148)||(28030-28177)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-148)||(10363-10510)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-148)||(24076-24222)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-148)||(339725-339871)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-148)||(124785-124931)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-147)||(6811-6956)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-145)||(3673-3816)
scaffold0292 (1-143)||(547-689)
[»] scaffold0228 (3 HSPs)
scaffold0228 (60-148)||(4707-4795)
scaffold0228 (60-148)||(12289-12377)
scaffold0228 (60-148)||(22241-22329)
[»] scaffold0540 (1 HSPs)
scaffold0540 (63-148)||(2987-3072)
[»] scaffold0352 (1 HSPs)
scaffold0352 (63-148)||(17823-17908)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-148)||(13292-13438)
[»] scaffold0026 (2 HSPs)
scaffold0026 (60-148)||(26095-26183)
scaffold0026 (1-148)||(40057-40203)
[»] scaffold0235 (1 HSPs)
scaffold0235 (61-148)||(11347-11434)
[»] scaffold0016 (2 HSPs)
scaffold0016 (61-148)||(2051-2138)
scaffold0016 (66-113)||(207359-207406)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-145)||(824-967)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-148)||(21111-21257)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-148)||(32733-32880)
scaffold0120 (1-148)||(46125-46272)
scaffold0120 (63-112)||(16323-16372)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-148)||(8307-8454)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-128)||(2172-2298)
[»] scaffold0647 (1 HSPs)
scaffold0647 (2-142)||(5897-6036)
[»] scaffold0484 (1 HSPs)
scaffold0484 (64-148)||(1114-1198)
[»] scaffold0165 (2 HSPs)
scaffold0165 (72-148)||(3681-3757)
scaffold0165 (72-148)||(7745-7821)
[»] scaffold0070 (1 HSPs)
scaffold0070 (60-148)||(4723-4811)
[»] scaffold0357 (2 HSPs)
scaffold0357 (8-113)||(13365-13471)
scaffold0357 (8-113)||(15879-15985)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-148)||(10201-10347)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-148)||(13695-13841)
[»] scaffold0010 (2 HSPs)
scaffold0010 (8-111)||(60494-60598)
scaffold0010 (1-99)||(130154-130254)
[»] scaffold0718 (1 HSPs)
scaffold0718 (58-148)||(4962-5052)
[»] scaffold0351 (1 HSPs)
scaffold0351 (4-148)||(16479-16622)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-148)||(32264-32409)
[»] scaffold0106 (2 HSPs)
scaffold0106 (5-145)||(1489-1628)
scaffold0106 (5-145)||(7466-7605)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-148)||(15240-15386)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-148)||(51659-51805)
[»] scaffold0395 (1 HSPs)
scaffold0395 (60-132)||(796-868)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-99)||(45564-45664)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-40)||(5155-5194)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-148)||(827-973)
[»] scaffold0358 (2 HSPs)
scaffold0358 (63-148)||(135-220)
scaffold0358 (63-148)||(4911-4996)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-38)||(51888-51925)
[»] scaffold0046 (2 HSPs)
scaffold0046 (52-108)||(16745-16801)
scaffold0046 (52-108)||(25905-25961)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-52)||(9372-9423)
[»] scaffold0356 (1 HSPs)
scaffold0356 (52-111)||(486-545)
[»] scaffold0169 (1 HSPs)
scaffold0169 (52-111)||(29248-29307)
[»] scaffold0009 (1 HSPs)
scaffold0009 (52-111)||(85782-85841)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-51)||(427-477)
[»] scaffold0077 (1 HSPs)
scaffold0077 (53-111)||(55510-55568)
[»] scaffold0076 (1 HSPs)
scaffold0076 (53-111)||(24423-24481)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-34)||(2576-2609)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-38)||(214-251)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-38)||(6569-6606)
[»] scaffold0260 (1 HSPs)
scaffold0260 (51-111)||(8364-8424)
[»] scaffold0166 (1 HSPs)
scaffold0166 (69-113)||(9677-9721)
[»] scaffold0107 (1 HSPs)
scaffold0107 (63-111)||(9920-9968)
[»] scaffold0078 (1 HSPs)
scaffold0078 (8-40)||(10836-10868)


Alignment Details
Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36154602 - 36154713
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36154602 cgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaa 36154701  T
Q  101 ccttggggtagt 112  Q
    ||||||||||||    
T  36154702 ccttggggtagt 36154713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11581019 - 11581130
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  11581019 cgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgcttgtttaggattttgcgatctttgtcgtacgagtcgttgagagttgaa 11581118  T
Q  101 ccttggggtagt 112  Q
    ||||||||||||    
T  11581119 ccttggggtagt 11581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25421879 - 25421732
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||   ||  | ||| |  || ||||||||||| |||||| |||||||| |||||||||||||    
T  25421879 cgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaa 25421780  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  25421779 ccttggggtagcattgagacttaatgatgatgttaattataatctgtg 25421732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13095841 - 13095694
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||| ||||| |||||| ||||||||||||||||||||   ||| | || ||||||  || |||||||| |||||| |||||||||||||||||||||    
T  13095841 cgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgtta-ggtttttgcgacctttgttgcacgagtcgttgagagttga 13095743  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13095742 accttggggtagtattaagacttaatgatgatgttaattataatatgtg 13095694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9078299 - 9078152
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  || |||||||||||||| |||||||| ||| ||| || ||||||    
T  9078299 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagggttgaa 9078200  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9078199 ccttggggtagtattgagacttaatgatgatgttaattataatctgtg 9078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 22144390 - 22144292
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||||||||||||||||||  || | ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22144390 gcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttgg 22144292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1096814 - 1096673
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |   ||| ||||| | ||| | |||||||||||| |||||||| ||| ||| | ||||| |    
T  1096814 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagttgttaaaagttgga 1096715  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataa 142  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||    
T  1096714 ccttggggtagtattgagacttaatgaggatgttaattataa 1096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24493915 - 24493768
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||| |||||||| |||| ||| ||  ||| | || ||||||  || |||||||| |||||| |||||||| ||||||||||||    
T  24493915 cgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgtta-ggtttttgcgacctttgttgcacgagttgttgagagttga 24493817  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  24493816 accttggggtagtattaagacttaataatgatgttaattataatctgtg 24493768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13025657 - 13025510
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||| ||||| | |||| ||||||||||||||||||||   ||| | || ||||||  || |||||||| |||||| |||||| | ||||||||||||    
T  13025657 cgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgtta-ggtttttgcgacctttgttgcacgatttgttgagagttga 13025559  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13025558 accttggggtagtattaagacttaatgatgatgttaattataatatgtg 13025510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25431741 - 25431594
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||||||||||||||||||| |||||||||||||| |   |   | ||| |  || ||||||||||| ||||||  ||||||| |||||||||||||    
T  25431741 cgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagttgttgagagttgaa 25431642  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| ||||| ||| ||| ||||||||||||||||||||||||||||    
T  25431641 ccttgaggtagcattgagacttaatgatgatgttaattataatctgtg 25431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24529567 - 24529420
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| |  | ||||||  || |||||||| |||||| |||| ||| ||||||||||||    
T  24529567 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtta-ggtttttgcgacctttgttgcactagtagttgagagttga 24529469  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||| | | |||||||||||||||| |||||||||||    
T  24529468 accttggggtagtattgaaacttaatgatgatgttaactataatctgtg 24529420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21985921 - 21986068
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||||||| || |||||| |||||||||||||||||| |   ||| | || ||||||  || |||||||| |||||| |||||||| ||||||||||||    
T  21985921 cgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgtta-ggtttttgcgacctttgttgcacgagttgttgagagttga 21986019  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||| ||| || ||||||||||||| |||||| ||||    
T  21986020 accttggggtagtattcagacttgatgatgatgttaactataatttgtg 21986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 23390330 - 23390417
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| || |||||| |||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  23390330 gattttgtgacctttgttgcacgagttgtcgagagttgaaccttgggatagtattaagacttaatgaggatgttaattataatctgtg 23390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 8286618 - 8286756
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||| |||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| ||  |||| |||||||||||||    
T  8286618 gccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcttgagttgttgagagttgaa 8286715  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattata 141  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  8286716 cctttgggtagtattaagacttaatgaagatgttaattata 8286756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 22107210 - 22107294
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| |||||| |||||||| |||||||| |||||||| | |||||||||||| ||||||| || |||||||||||||||||    
T  22107210 tttgcgacctttgttgcacgagttgttgagagatgaacctttgagtagtattaagacttaatgaagaggttaattataatctgtg 22107294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21292745 - 21292891
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   | | | ||  | |||| |||||||||| |||||| |||||||| || | |||||| |    
T  21292745 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgact-ttttagattttgcgacctttgttgcacgagttgtcgggagttgga 21292843  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || | |||||| ||||||| ||||| |||| |||||||||||||||||    
T  21292844 cccttgggtaggattaagacttaataatgaggttaattataatctgtg 21292891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 22075304 - 22075219
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| |||||| |||||||| ||||||  || |||||| |||||| ||||||| ||||||| || |||||||||||| ||||    
T  22075304 ttttgcgacctttgttgcacgagttgttgaggattaaacctttgggtagcattaagacttaatgaagaggttaattataatatgtg 22075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 21329276 - 21329369
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggat-tttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||||||||||||||||||||||| | ||||| ||||| |||| ||||||| || |   ||||||||||||||||||||| | || |||||||    
T  21329276 gcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttga 21329369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22075365 - 22075328
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22075365 cgccacggcgagcagaggctctcgcctcgcgagtgacc 22075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5888949 - 5889033
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggat-tttgcgatctttgtcgcacg 83  Q
    ||||| |||||||||||||||||||||||||||  ||| ||||||| |||| ||||||| || |   ||||||||||||||||||    
T  5888949 cgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtttaggttaaatgcgatctttgtcgcacg 5889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29324995 - 29325078
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag-tgacctatttacataatgcttgttttggattttgcgatc-tttgtcgcacg 83  Q
    ||||| ||||||||||| ||||||||||||||| || ||||||| || ||  ||||||| ||||||||||||| |||||||||||    
T  29324995 cgccatggcgagtagagcctctcgcctcgcgagttgtcctattt-cagaagccttgtttaggattttgcgatcttttgtcgcacg 29325078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 22120033 - 22120080
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  22120033 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagta 22120080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20026713 - 20026746
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  20026713 cgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22959307 - 22959339
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  22959307 cgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 24767180 - 24767224
Alignment:
Q  69 gatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    |||||||||||||||||| |||  ||||||||||||||| |||||    
T  24767180 gatctttgtcgcacgagttgttatgagttgaaccttgggatagta 24767224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25744068 - 25744036
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  25744068 cgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 26740482 - 26740530
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||||||||||||||| |||  |||| ||||||| |||||||||||    
T  26740482 ttttgcgatctttgtcgcaagagatgttgtgagttgatccttggggtag 26740530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14576607 - 14576754
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| | ||| |  || ||||||||||| |||||| |||||||| |||||||||||||    
T  14576607 cgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaa 14576706  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14576707 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 14576754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14572935 - 14572788
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||   ||| | | | |  || || |||||||| |||||| |||||||| |||||||||||||    
T  14572935 cgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaa 14572836  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  14572835 ccttggggtagtattaagacttaatgatgatgttaattataatttgtg 14572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40213495 - 40213641
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| |||||||||| ||    
T  40213495 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagtttaa 40213594  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgt 147  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  40213595 ccttggggtagtattgagacttaatgatgatgttaattataatctgt 40213641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17248060 - 17248168
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||    
T  17248060 cgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttagaattttgcgatctttgtcgcacgagtcgttgagagttaaa 17248159  T
Q  101 ccttggggt 109  Q
    |||||||||    
T  17248160 ccttggggt 17248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 53070472 - 53070583
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||||||||||||||||||||||||||  || | ||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53070472 cgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaa 53070571  T
Q  101 ccttggggtagt 112  Q
    ||||||||||||    
T  53070572 ccttggggtagt 53070583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 25476159 - 25476306
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||| |||||||||||||||||||||||||||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| |||||||||||||    
T  25476159 cgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaa 25476258  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| ||||||||| ||| ||||||| ||||||||||| ||||||||    
T  25476259 ccttgaggtagtattgagacttaatgaggatgttaattacaatctgtg 25476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 11424537 - 11424684
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||||||||||||||||||||||||||||||| ||||||   ||| | || ||||||  || |||||||| |||||| |||||||| ||||||||||||    
T  11424537 cgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgtta-ggtttttgcgacctttgttgcacgagttgttgagagttga 11424635  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || ||||||||||||| ||| |||||| ||||||||||| |||||||||    
T  11424636 actttggggtagtattgagacttaatgttgatgttaattttaatctgtg 11424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 17488203 - 17488056
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctattta-cataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||||||||||||   | || | ||| | | || |||||||||| |||||| |||||||| || |||||||||    
T  17488203 cgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgagagttga 17488105  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  17488104 accttgggatagcattaagacttaatgatgatgttaattataatctgtg 17488056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 18438880 - 18438734
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||  || |||||||| |||||| |||||||| |||||| ||||||    
T  18438880 gccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtta-ggtttttgcgacctttgttgcacgagttgttgagtgttgaa 18438782  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  18438781 ccttggggtagtattgagacttaatgatgatgttaactataatctgtg 18438734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20698211 - 20698371
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  20698211 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgtggcacgagttgtcgagagttga 20698308  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtggtgctgctcaagat 162  Q
    ||||| || ||| ||||||| ||||||||||||||||||||||||||||  |||| |||||||    
T  20698309 acctttggatagaattaagacttaatgatgatgttaattataatctgtgaagctgttcaagat 20698371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 42386758 - 42386611
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||||||||||||||| ||||||||||  || | ||||| ||  ||||||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  42386758 cgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaagccttgtttaggattttgcgaactttgtcgcacgagttgttgtgagttgaa 42386659  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||  || ||  | ||||||||||| ||||||||||    
T  42386658 ccttggggtagtattgggacttgtttatgatgttaatgataatctgtg 42386611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 14973201 - 14973057
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||| ||||||| |   ||| | ||| |  || |||||||||||| | |||||||| ||| | | |||||||||    
T  14973201 cgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgctaagagttgaa 14973102  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  14973101 ccttggggtagtattgagacttaatgatgatgttaattataatct 14973057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 13442619 - 13442474
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaac 101  Q
    ||||||||||| ||||||||||||||||||||||||| |   ||| | ||| | | || |||||||||| |||||| |||||||| || |||||||||||    
T  13442619 gccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgagagttgaac 13442521  T
Q  102 cttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||| |   ||||||| ||||||||||||||||||||||||||||    
T  13442520 cttgggatgacattaagacttaatgatgatgttaattataatctgtg 13442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23083136 - 23083282
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| |||||||||||||||||||||||||| ||||| |   ||||| || ||||||  |  |||||||| |||||| |||||||| ||| ||||||||    
T  23083136 cgccatggcgagtagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgttagg--ttttgcgacctttgttgcacgagttgttcagagttga 23083233  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||| ||||||||||||| ||| ||||||||||||||| ||||||||    
T  23083234 accttgaggtagtattaagacttagtgatgatgttaattacaatctgtg 23083282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 52523508 - 52523613
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||||||||||| |||||||  |||||  || | ||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  52523508 gcgagtagaggccctcgcctgacgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcattgagagttgaactttggg 52523607  T
Q  108 gtagta 113  Q
    ||||||    
T  52523608 gtagta 52523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 2050980 - 2051073
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaac 101  Q
    |||||||||||||||||||||| ||||  || | ||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  2050980 gcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgcttgtttaggattttgcgatctttgtcgcatgagttgttgagagttgaac 2051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 26687233 - 26687087
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||  |  |||| ||| |||||| |||||| ||||||||||||||    
T  26687233 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg--ttttacgacctttgttgcacgaatcgttgagagttga 26687136  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || |||||||||||||  || ||||||| ||||||||||||||||||||    
T  26687135 actttggggtagtattgggacttaatgaggatgttaattataatctgtg 26687087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 17499625 - 17499538
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||    
T  17499625 gattttgcgacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatttgtg 17499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 23274988 - 23274924
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagt 112  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  23274988 aatgcttgtttaggtttttgcgatctttgtcgcacgagttgttgagagttgagccttgggatagt 23274924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 30030126 - 30030039
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || |||||||||||||| ||||||  |||||| |||||||||||||| | |||||| ||||    
T  30030126 gattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtagctttaagacttaatgatgatgtttaatataatatgtg 30030039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 12340030 - 12339980
Alignment:
Q  69 gatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaaga 119  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  12340030 gatctttgtcgcacgagttgttgagagttgaacctttgggtagtatgaaga 12339980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 43841217 - 43841132
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| ||||||  ||||||| ||||||||||  || |||||||||||||  || |||| || ||||||||||||||||||||    
T  43841217 ttttgcgacctttgttacacgagttgttgagagtttgactttggggtagtattgggacttaacgaggatgttaattataatctgtg 43841132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 16796831 - 16796747
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| |||||| |||||| | ||| ||||||||||||| |||||| ||||||| ||||||| || | |||||||||| ||||    
T  16796831 tttgcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaagacttaatgaagaggctaattataatatgtg 16796747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12399552 - 12399515
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  12399552 cgccacggcgagtaaaggctctcgcctcacgagtgacc 12399515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 14669039 - 14668994
Alignment:
Q  68 cgatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    ||||||||||||||||||| |||  ||||||||||||||| |||||    
T  14669039 cgatctttgtcgcacgagttgttatgagttgaaccttgggatagta 14668994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13210101 - 13210133
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  13210101 cgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 17061740 - 17061845
Alignment:
Q  7 ggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  17061740 ggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccatgg 17061839  T
Q  107 ggtagt 112  Q
    ||||||    
T  17061840 ggtagt 17061845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 38227827 - 38227680
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||  ||| | ||| |  || || |||||||| |||||| |||||||| ||| |||||||||    
T  38227827 cgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagttgttaagagttgaa 38227728  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  38227727 ccttggggtagtattaagacttaatgatgatgttaattataatatgtg 38227680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 12756496 - 12756601
Alignment:
Q  7 ggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    ||||||||||||||||||||||||||||  || | ||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12756496 ggcgagtagaggctctcgcctcgcgagttgcccaattacaaaagccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 12756595  T
Q  107 ggtagt 112  Q
    ||||||    
T  12756596 ggtagt 12756601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 2279899 - 2280000
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||||||||||| ||||||||||||||  |||| ||| | ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2279899 gcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggattttgcgatctttgtcacacgagttgttgagagttgaaccttggg 2279998  T
Q  108 gt 109  Q
    ||    
T  2279999 gt 2280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 12255572 - 12255677
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||||||||||||||||||||||||||  || | ||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||  |||||    
T  12255572 gcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttgttgagagttgaattttggg 12255671  T
Q  108 gtagta 113  Q
    ||||||    
T  12255672 gtagta 12255677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9509535 - 9509389
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| | | || |||||||||| |||||| ||| |||| || ||||||||||    
T  9509535 cgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgcct-tgttagattttgcgacctttgttgcaagagttgtcgagagttgaa 9509437  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| ||| ||||||| ||||||| ||||||||||||||||||||    
T  9509436 ccttgggatagcattaagacttaatgaggatgttaattataatctgtg 9509389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 44116852 - 44116741
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||  | ||||| || ||| |||| |||||||||||||||| | ||||||||||||||| ||||||    
T  44116852 cgccatggcgagcagaggctctcgcctcgcgagtgactcagttacagaacgctagtttaggattttgcgatctttattgcacgagtcgttgagggttgaa 44116753  T
Q  101 ccttggggtagt 112  Q
    ||||||||||||    
T  44116752 ccttggggtagt 44116741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 15143811 - 15143957
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| |||||||||||||||||||||||||||   ||| | ||| |  || ||||||||||| |||||| |||||||| | | |||||||||    
T  15143811 cgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagttgaa 15143910  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgt 147  Q
    ||| ||||||||| ||||| |||||||||||||| | ||||||||||    
T  15143911 cctcggggtagtactaagacttaatgatgatgtttaatataatctgt 15143957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3564138 - 3564279
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||| ||||| | | ||||||||||||||||||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| ||| |||||| ||    
T  3564138 cgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttaagagtttaa 3564237  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataa 142  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  3564238 ccttggggtagtattgagacttaatgatgatgttaattataa 3564279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 12699117 - 12699032
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| |||||| |||||||| || || |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12699117 ttttgcgacctttgttgcacgagttgtcgatagttgaaccttggggtagtattaagagttaatgaggatgttaattataatctgtg 12699032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 10589384 - 10589238
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||| | |||||||| ||  |||||||     
T  10589384 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgaccttttttgcacgagttgtctagagttgg 10589287  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  10589286 acctttgggtaggattaagacttaatgatgaggttaattataatctgtg 10589238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 40443735 - 40443589
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||  | | ||||||||||||| |||||| |||||||| || ||||| ||||    
T  40443735 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgact-tattggattttgcgacctttgttgcacgagttgtcgagagatgaa 40443637  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || | |||||| ||||||| ||||  |||| |||||||||||||||||    
T  40443636 cccttgggtaggattaagacttaacaatgaggttaattataatctgtg 40443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 26212342 - 26212196
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctattta-cataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||||||||||||||||||||||||||||| |   | || | || ||  || |  |||||||| |||||| |||||||| ||||||  || |    
T  26212342 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgttag--ttttgcgacctttgttgcacgagttgttgaggattaa 26212245  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| ||||||| ||||||| || |||||||||||||||||    
T  26212244 acctttgggtagcattaagacttaatgaagaggttaattataatctgtg 26212196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 27847608 - 27847754
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||||||| || ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  27847608 cgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 27847705  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||| ||||||| ||||| ||||  |||| |||||||||||    
T  27847706 acccttgggtaggattaagacttaataatgagattaactataatctgtg 27847754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 16386022 - 16386168
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| || |||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| ||| |||| ||  ||||||||    
T  16386022 cgccacggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcatgagttgtccagagttga 16386119  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||  ||||||| ||||||| || ||||| |||||||||||    
T  16386120 acctttgggtaacattaagacttaatgaagaggttaactataatctgtg 16386168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 15008278 - 15008375
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 104  Q
    |||||||||||||||||||||||||||  || | ||  | ||| | |||||| || |||||||||||||||||||||||  |||  ||||||||||||    
T  15008278 gcgagtagaggctctcgcctcgcgagttgcccagttgtagaataccttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgaacctt 15008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 9033170 - 9033229
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  9033170 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 9033229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 9751390 - 9751437
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  9751390 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagta 9751437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 14036494 - 14036435
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  14036494 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 14036435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 14045044 - 14044985
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  14045044 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 14044985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 14346524 - 14346465
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  14346524 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 14346465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 14355074 - 14355015
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  14355074 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 14355015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 810903 - 810936
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagt 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  810903 cgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22073263 - 22073210
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgctt 54  Q
    ||||| ||||||||||||| |||||||||||||| ||| | ||||| |||||||    
T  22073263 cgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctt 22073210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 68093 - 68061
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  68093 cgccatggcgagtagaggctctcgcctcgcgag 68061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8776706 - 8776623
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag-tgacctatttacataatgcttgttttggattttgcgatc-tttgtcgcacg 83  Q
    ||||| || |||||||| ||||||||||||||| || || |||| |||||  ||||||| ||||||||||||| |||||||||||    
T  8776706 cgccatggtgagtagagcctctcgcctcgcgagttgtcccattt-cataagccttgtttaggattttgcgatcttttgtcgcacg 8776623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9389469 - 9389501
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  9389469 cgccatggcgagtagaggctctcgcctcgcgag 9389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 16056668 - 16056624
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc 52  Q
    ||||||||||||||||||||||||||| ||| | ||||| |||||    
T  16056668 gcgagtagaggctctcgcctcgcgagttacccagttacagaatgc 16056624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 16092042 - 16091994
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  16092042 ttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 16091994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 41598531 - 41598420
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  41598531 cgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaatgcttgtttaggattttgcgatctttgccgcacgagtcgttgagagttgaa 41598432  T
Q  101 ccttggggtagt 112  Q
    ||||||||||||    
T  41598431 ccttggggtagt 41598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 22627081 - 22626935
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||||||| ||||||||||||||||||||||| |||   ||| | || ||||||  || |||||||| |||||| |||||||| |||||||||||||    
T  22627081 gccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgtta-ggtttttgcgacctttgttgcacgagttgttgagagttgaa 22626983  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  22626982 ccttggggtagtattgagacttaatgaggatgttaattataatctgtg 22626935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 6759603 - 6759456
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||  ||||||||| |||| |||||||| ||| | | ||||||||    
T  6759603 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtta-ggattttgcaatctgtgtcgcacaagttgctaagagttga 6759505  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  6759504 accttggggtagtattgagacttaatgatgatgttaattataatctgtg 6759456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20536554 - 20536408
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |   ||| | ||  |  || || |||||||| |||||| |||||||| || ||| ||||||    
T  20536554 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattagg-ttttgcgacctttgttgcacgagttgtcgagtgttgaa 20536456  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  20536455 ccttggggtagtattaagacttaatgaggatgttaattataatctgtg 20536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21923703 - 21923849
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||| ||| ||||||||||||||||||||||||| |   ||| | ||| |  || || |||||||| |||||| || ||||| |||||||||||||    
T  21923703 cgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcccgagtagttgagagttgaa 21923801  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  21923802 ccttgaggtagtattaagacttaatgatgatgttaattataatctgtg 21923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 28648818 - 28648965
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||||||||||||| |||  ||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| |||||||||||||    
T  28648818 cgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaa 28648917  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  28648918 ccttggggtagtattgagacttaatgatgatgttaattataatatgtg 28648965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 18818184 - 18818330
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||  |  |||||||| |||||| |||||||| ||||||||||||    
T  18818184 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg--ttttgcgacctttgttgcacgagttgttgagagttga 18818281  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |  || |||||||||||||| ||||||| ||||||||||||||||||||    
T  18818282 aatttagggtagtattaagacttaatgaggatgttaattataatctgtg 18818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 23648835 - 23648754
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgt 147  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  23648835 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattaagacctaatgatgatgttaattataatctgt 23648754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 22875349 - 22875265
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||||| ||| ||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  22875349 tttgcgatctatgtcgcacaagttgttaagagttgaaccttggggtagtattgagatgtaatggtgatgttaattataatctgtg 22875265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16092115 - 16092257
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||| ||||||||| |   ||| | |||    || |||||||||||||| |||| ||| ||| ||| |||||||||    
T  16092115 cgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagttgttaagagttgaa 16092214  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataat 143  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||    
T  16092215 ccttggggtaatattgagacttaaggatgatgttaattataat 16092257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19801201 - 19801312
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctat-ttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| ||||||||||||  |||||||||||||| || | | ||||| ||  ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  19801201 cgccatggcgagtagaggtcctcgcctcgcgagt-acttgtgttacagaagccttgtttaggatttttcgatctttgtcgcacgagtcattgagagttga 19801299  T
Q  100 accttggggtagt 112  Q
    |||||||||||||    
T  19801300 accttggggtagt 19801312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 18879020 - 18879158
Alignment:
Q  9 cgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgggg 108  Q
    |||| ||||||||||||||||||||||||| |   ||| | ||| | | || |||||||||  |||||| |||||||| || |||||||||||||||||     
T  18879020 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcct-tgttagattttgcggcctttgttgcacgagttgtcgagagttgaaccttggga 18879118  T
Q  109 tagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| || |||| |||||||||||||||| |||||||||||    
T  18879119 tagcatcaagacttaatgatgatgttaactataatctgtg 18879158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 7373055 - 7372970
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| |||||| |||||||| |||||||||||||| ||||||| ||| | ||| ||||||| ||||||||||||||||||||    
T  7373055 ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtggtagtgagacttaatgaggatgttaattataatctgtg 7372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 25362977 - 25363061
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| |||| | |||||||| ||||||||||||||||| |||||||||||||| ||||||| || | |||||||||||||||    
T  25362977 tttgcgacctttcttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatgaagaggctaattataatctgtg 25363061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 16199421 - 16199567
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||| ||||| ||| ||||||||||||||||||||| |   ||| | ||  | | ||||||||||||| |||||| |||||||| || ||||||||||    
T  16199421 cgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgact-tattggattttgcgacctttgttgcacgagttgtcgagagttgaa 16199519  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || | |||||| ||||||| ||||  |||| |||||||||||||||||    
T  16199520 cccttgggtaggattaagacttaacaatgaggttaattataatctgtg 16199567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23406727 - 23406581
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |   ||| | ||| | | || | ||||| || |||||| ||||||||  ||||||||||||    
T  23406727 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgcct-tgttaggttttgtgacctttgttgcacgagttattgagagttgaa 23406629  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    | ||||| || ||||  || ||||||| ||||||||||||||| ||||    
T  23406628 ctttgggataatattgggacttaatgaggatgttaattataatatgtg 23406581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 31971542 - 31971455
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || ||||| |||||||| |||||| ||||||| ||||  |||| |||||||||||||||||    
T  31971542 gattttgcgacctttgttgcacgagttgtcgagagctgaacctttgggtaggattaagacttaacaatgaggttaattataatctgtg 31971455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 45130832 - 45130919
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || |||||||| ||| | |||||| ||||||| ||||| |||| |||||||||||||||||    
T  45130832 gattttgcgacctttgttgcacgagttgtcgagagttggacccttgggtaggattaagacttaataatgaggttaattataatctgtg 45130919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21918775 - 21918921
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| |||||| |||||||||||||||||||||||||||   ||| | || ||||  || |||||||||| |||||| ||| |||| || |||||||||    
T  21918775 cgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttg--ttagattttgcgacctttgttgcatgagttgtcgagagttga 21918872  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||  ||||||| |||| ||||| ||||||||  |||||||    
T  21918873 acccttgggtaagattaagacttaacgatgaggttaattacgatctgtg 21918921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 13507905 - 13507957
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||| || |||||||||||||||||||||||| |||||||||||||    
T  13507905 aatgcatgtttaggtttttgcgatctttgtcgcacgagttgttgagagttgaa 13507957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 13597437 - 13597489
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||| || |||||||||||||||||||||||| |||||||||||||    
T  13597437 aatgcatgtttaggtttttgcgatctttgtcgcacgagttgttgagagttgaa 13597489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 22963244 - 22963303
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| ||||||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  22963244 cttgtttaggattttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 22963303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 40492677 - 40492736
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| ||||||||||||||||||||||||||  |||| ||||||| ||||| |||||    
T  40492677 cttgtttaggattttgcgatctttgtcgcacgagatgttgtgagttgatccttgtggtag 40492736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 14103049 - 14103108
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  14103049 cttgtttagggttttgcgatctttgtcgcacgagatgttacgagttgatccttggggtag 14103108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 20533233 - 20533292
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  20533233 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 20533292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21415001 - 21415084
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatc-tttgtcgcacg 83  Q
    ||||| ||||||||||| ||||||||||||||||   | | ||||| ||  ||||||| ||||||||||||| |||||||||||    
T  21415001 cgccatggcgagtagagcctctcgcctcgcgagttgtccaattacagaaaccttgtttaggattttgcgatcttttgtcgcacg 21415084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 23668105 - 23668046
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  23668105 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 23668046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39834179 - 39834134
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttaca 46  Q
    ||||| |||||||||||||||||||||||||||  ||| |||||||    
T  39834179 cgccatggcgagtagaggctctcgcctcgcgagctacccatttaca 39834134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 16799784 - 16799732
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 104  Q
    ||||||| || |||| |||||||||||||||||| |||| |||||||| ||||    
T  16799784 cttgtttagggttttacgatctttgtcgcacgagacgttaagagttgatcctt 16799732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 19154709 - 19154769
Alignment:
Q  51 gcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||||| || |||||||||||||||||||||||  |||  ||||||| |||||| ||||    
T  19154709 gcttgtttagggttttgcgatctttgtcgcacgagatgttacgagttgatccttggtgtag 19154769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39107 - 38960
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||||| || ||||||  || |||||||| |||||| |||||||| ||||||||||||    
T  39107 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgtta-ggtttttgcgacctttgttgcacgagttgttgagagttga 39009  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39008 accttggggtagtattaagacttaatgatgatgttaattataatctgtg 38960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 44102557 - 44102446
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  44102557 cgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagtcgttgagagttgaa 44102458  T
Q  101 ccttggggtagt 112  Q
    ||||||| ||||    
T  44102457 ccttgggatagt 44102446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 44928697 - 44928808
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44928697 cgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaa 44928796  T
Q  101 ccttggggtagt 112  Q
    ||||| ||||||    
T  44928797 ccttgtggtagt 44928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14038995 - 14038848
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  || |||||||||||||| |||||||| ||| | | |||||||||    
T  14038995 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgctaagagttgaa 14038896  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  14038895 ccttggggtagtattgagacttaatgatgatattaattataatctgtg 14038848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16377296 - 16377450
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgt-tgagagttga 99  Q
    |||||||||||| ||||||||||||||| ||||||||| |   ||||| ||| |  || ||||||||| | |||||| ||||||||  | ||||||||||    
T  16377296 cgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgcacgagttttatgagagttga 16377395  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtggtgctg 154  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  16377396 accttggggtagtattgagacttaatgatgatgttaattataatctgtggagctg 16377450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 52242974 - 52243079
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||||||||||||||||||||||||||  || | ||||| ||||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||||    
T  52242974 gcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcgtaaagagttgaactttggg 52243073  T
Q  108 gtagta 113  Q
    ||||||    
T  52243074 gtagta 52243079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15091243 - 15091096
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  || |||||||||||||| |||||||| |||   | |||||||||    
T  15091243 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtttctaagagttgaa 15091144  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  15091143 ccttggggtagtattgagacttaatgaagatgttaattataatctgtg 15091096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 44053175 - 44053029
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||| |||||||||||||||||||| |   ||| | ||| | | || |||||||||| |||||| |||||||| || ||||||||||    
T  44053175 cgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgagagttgaa 44053077  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  44053076 ccttgggatagcattaagacttaatgatgatgttaattataatctgtg 44053029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12903103 - 12902957
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||||||||||||||||| |||||||||||||||| |   ||| | ||| | | || |||||||||| |||||| |||||||  |||||||||||||    
T  12903103 cgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgcct-tgttagattttgcgacctttgttgcacgagctgttgagagttgaa 12903005  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||| |||||| ||||||| ||||||| || |||||||||||||||||    
T  12903004 cctttgggtaggattaagacttaatgaagaggttaattataatctgtg 12902957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 16239806 - 16239889
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctg 146  Q
    |||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  16239806 ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtagtattaagacttaatgatgatgttaattataatctg 16239889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21815405 - 21815511
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||||||||||||||||||||||||||  || | ||||| ||  ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  21815405 cgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgtttaggattttgcgatcttcatcgcacgagtcgttgagagttgaa 21815504  T
Q  101 ccttggg 107  Q
    |||||||    
T  21815505 ccttggg 21815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22636780 - 22636634
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||| ||||||||| |   ||| | || ||||||  |  |||||||| |||||| |||||||| ||||||| ||||    
T  22636780 cgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttagg--ttttgcgacctttgttgcacgagttgttgagaattga 22636683  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||    
T  22636682 accttggggtagtattaagacttaacgaggatgttaattataatctgtg 22636634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21815076 - 21815173
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttg 98  Q
    ||||| ||||||||||||||||||||||||||||  || | ||||| ||  ||||||| |||||||||||||||  ||||||||||||||||||||||    
T  21815076 cgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgtttaggattttgcgatcttcatcgcacgagtcgttgagagttg 21815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21818498 - 21818595
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttg 98  Q
    ||||| ||||||||||||||||||||||||||||  || | ||||| ||  ||||||| |||||||||||||||  ||||||||||||||||||||||    
T  21818498 cgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgtttaggattttgcgatcttcatcgcacgagtcgttgagagttg 21818595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7894047 - 7893900
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||| ||||||||| |   ||| |  | ||||||  || |||||||| |||||| ||| |||| |  |||||||||    
T  7894047 cgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgtta-ggtttttgcgacctttgttgcatgagttgccgagagttga 7893949  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  7893948 accttggggtaatattaagacttaacgatgatgttaattataatctgtg 7893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 15464710 - 15464816
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||||||||||||||||||  || | ||||| |||| ||||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||    
T  15464710 gcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagttgttatgagttgaaccttgg 15464809  T
Q  107 ggtagta 113  Q
     ||||||    
T  15464810 agtagta 15464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3096989 - 3096843
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| |||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  3096989 cgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 3096892  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| || || | |||||||||| |||||||||||| ||||    
T  3096891 acctttgggtaggataaatacttaatgatgaggttaattataatatgtg 3096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7089223 - 7089077
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| |||||| |||||||||||||||||||||||||     ||| | || ||||||   |||||||||| |||||| ||| |||| || |||||||||    
T  7089223 cgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgtta--gattttgcgacctttgttgcaagagttgtcgagagttga 7089126  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| | |||| ||||||| ||||||| || |||||||||||||||||    
T  7089125 acctttgagtagcattaagacttaatgaagaggttaattataatctgtg 7089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 14053136 - 14053223
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || |||||||||||| | |||||| ||||||| ||||  |||| |||||||||||||||||    
T  14053136 gattttgcgacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagacttaacaatgaggttaattataatctgtg 14053223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 17047909 - 17047972
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatga 127  Q
    ||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  17047909 tttgcgacctttgttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatga 17047972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 23374134 - 23374277
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||| |||||| |   ||| | || ||||  || |||||||| | |||||| |||||||| ||||||  || |    
T  23374134 cgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttg--ttagattttgcaacctttgttgcacgagttgttgaggattaa 23374231  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||| |||||| ||||||| ||||||| || ||||| ||||||||    
T  23374232 acctttgggtagcattaagacttaatgaagaggttaactataatct 23374277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7799043 - 7799006
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  7799043 cgccacggcgagcagaggctctcgcctcgcgagtgacc 7799006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 17333576 - 17333517
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  17333576 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 17333517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 20157130 - 20157177
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  20157130 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagta 20157177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 24029022 - 24028975
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  24029022 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagta 24028975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 6190749 - 6190691
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaaga 119  Q
    |||||||||| |||||| |||||||  || |||||||||||||||| |||| |||||||    
T  6190749 gattttgcgacctttgttgcacgagctgtcgagagttgaaccttggcgtagcattaaga 6190691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8846721 - 8846619
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttt-tggattttgcgatctttgtcgcacgagtcgttgagagttg 98  Q
    ||||| |||||||||||||||||||||||||||  | ||| ||||| |||| ||||||| ||     ||||||||||||||||||||| | || ||||||    
T  8846721 cgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttatgttaaatgcgatctttgtcgcacgagttgatgtgagttg 8846622  T
Q  99 aac 101  Q
    |||    
T  8846621 aac 8846619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 15868531 - 15868585
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacc 102  Q
    ||||||||||| || |||||||||||||||||| ||||| |||  ||||||||||    
T  15868531 aatgcttgtttaggtttttgcgatctttgtcgcgcgagttgttatgagttgaacc 15868585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 16043294 - 16043249
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||||||||||||||||| || | ||||||| |||||||||||    
T  16043294 tgcgatctttgtcgcacgagttgtggtgagttgatccttggggtag 16043249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17047847 - 17047884
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  17047847 cgccatggcgagcagaggctctcgcctcgcgagtgacc 17047884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 13812652 - 13812696
Alignment:
Q  69 gatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    |||||||||||||||||| |||  ||||||||||||||| |||||    
T  13812652 gatctttgtcgcacgagttgttatgagttgaaccttgggatagta 13812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15099697 - 15099665
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  15099697 cgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15190664 - 15190632
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  15190664 cgccatggcgagtagaggctctcgcctcgcgag 15190632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 433354 - 433244
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||| | || || ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  433354 cgccatggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaa 433255  T
Q  101 ccttggggtag 111  Q
    |||||||||||    
T  433254 ccttggggtag 433244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 50209987 - 50210134
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| |||||||||||||    
T  50209987 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaa 50210086  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  50210087 cctttgggtagtattgagacttaatgatgatgttaattataatctgtg 50210134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 16758988 - 16758890
Alignment:
Q  11 agtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggt 109  Q
    ||||||||| ||| ||||||||||  |||| ||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16758988 agtagaggccctcacctcgcgagttgcctagttacagaatgctcgtttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggt 16758890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 22354347 - 22354493
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||||||||||||||||||||| ||||||| |   ||| | || ||||||  |  |||||||| |||||| |||||||| ||||||| ||||    
T  22354347 cgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttagg--ttttgcgacctttgttgcacgagttgttgagaattga 22354444  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||  ||||||||||||| ||||||| ||||||||||||||||||||    
T  22354445 acctttaggtagtattaagacttaatgaggatgttaattataatctgtg 22354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 34510127 - 34509983
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||| ||||||||| |   ||| | || | ||||  || |||||||| |||||| |||||||| |||||| |||||    
T  34510127 cgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgtta-ggtttttgcgacctttgttgcacgagttgttgagggttga 34510029  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  34510028 accttggggtagtattgagacttaatgatgatgttaattataatct 34509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22532616 - 22532477
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||| ||| ||||||||||||||||||||||||| |   ||| | || ||||||  ||||||||||| |||||| |||||||  ||||||||||||    
T  22532616 cgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtta-ggattttgcgacctttgttgcacgagctgttgagagttga 22532518  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattat 140  Q
    |||||| ||||||||| ||| ||||||||||||||| ||||    
T  22532517 accttgaggtagtattgagacttaatgatgatgttatttat 22532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 22356008 - 22356095
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| || |||||| |||||||| || ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  22356008 gattttgagacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtg 22356095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 22357694 - 22357781
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| || |||||| |||||||| || ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  22357694 gattttgagacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtg 22357781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 21027026 - 21026880
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| ||||||  || |    
T  21027026 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta--gattttgcgacctttgttgcacgagttgttgaggattaa 21026929  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| ||||||| ||||||| || |||||||||||||||||    
T  21026928 acctttgggtagcattaagacttaatgaagaggttaattataatctgtg 21026880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 20135469 - 20135387
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| | |||||| ||||||||||||||||| |||||||| |||||  |||||||| ||||||||||||||||||    
T  20135469 tgcgacctttgttgtacgagttgttgagagttgaaccttagggtagtagtaagacctaatgatgttgttaattataatctgtg 20135387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 21342393 - 21342332
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggt 109  Q
    ||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  21342393 aatgcttgtttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 21347258 - 21347197
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggt 109  Q
    ||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  21347258 aatgcttgtttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 27250564 - 27250650
Alignment:
Q  62 attttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||| ||| | | ||||||| || |||||||||||||||||    
T  27250564 attttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtagcattgatacttaatgaagaggttaattataatctgtg 27250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 35260860 - 35260966
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||| ||||||||||||||  || | ||||| ||| | ||| || ||||||||||||||||||||||||||  |||  ||||||||| ||||    
T  35260860 gcgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggattttgcgatctttgtcgcacgagatgttatgagttgaacattgg 35260959  T
Q  107 ggtagta 113  Q
    |||||||    
T  35260960 ggtagta 35260966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38801166 - 38801312
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| | || ||||  || |||||||||| |||||| | |||||| || |  ||||||    
T  38801166 cgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttg--ttagattttgcgacctttgttgtacgagttgtcggaagttga 38801263  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||| ||||||| ||||| ||||  |||| |||||| ||||    
T  38801264 acccttgggtaggattaagacttaataatgagattaactataatttgtg 38801312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 26065280 - 26065176
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||||||||||||||||||  || | ||||| ||| | |||||| || |||||||||||||||||||||||  |||  ||||| | ||||||    
T  26065280 gcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgttatgagtttatccttgg 26065181  T
Q  107 ggtag 111  Q
    |||||    
T  26065180 ggtag 26065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 20846994 - 20847137
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||| ||||||||||||||| |   ||| | || ||||  || |||||||||| |||||| |||||||| ||||||  || |    
T  20846994 cgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttg--ttagattttgcgacctttgttgcacgagttgttgaggattaa 20847091  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||| |||||| ||||||| ||||||| || |||||  |||||||    
T  20847092 acctttgggtagcattaagacttaatgaagaggttaaccataatct 20847137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 20346101 - 20346041
Alignment:
Q  51 gcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||||| || |||||||||||||||||||||||  |||  ||||| | |||||||||||    
T  20346101 gcttgtttagggttttgcgatctttgtcgcacgagatgttatgagttaatccttggggtag 20346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20637197 - 20637165
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  20637197 cgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27250504 - 27250540
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgac 37  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  27250504 cgccacgtcgagcagaggctctcgcctcgcgagtgac 27250540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 52940713 - 52940761
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  52940713 ttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 52940761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 15396 - 15500
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15396 gcgagcagaggctctcgcctcgcgagtgacctatttacaaaatacttgcttaggatttttcgatctttgtcgcacgaatcgttgagagttgaaccttggg 15495  T
Q  108 gtagt 112  Q
    |||||    
T  15496 gtagt 15500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17127 - 17024
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  17127 cgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagtcgttgatagttgaa 17028  T
Q  101 cctt 104  Q
    ||||    
T  17027 cctt 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 40259 - 40112
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |   ||| | | | |  || ||  ||||||| |||||| |||||||| |||||||||||||    
T  40259 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagttgttgagagttgaa 40160  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  40159 ccttggggtagtattgagacttaatgatgatgttaattataatctgtg 40112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 22737955 - 22738101
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||   ||| | ||| |  || || |||||||| |||||| |||||||| ||||||| |||||    
T  22737955 cgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaa 22738053  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  22738054 ccttggggtagtattaagacttaatgaggatgttaattataatctgtg 22738101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23286207 - 23286061
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||||||||||||   ||| | || ||||||   |||||||||| |||||| ||| |||| ||||||||||||    
T  23286207 cgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta--gattttgcgacctttgttgcatgagttgttgagagttga 23286110  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  23286109 acctttgggtagtattaagacttaatgaagatgttaattataatctgtg 23286061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 23708399 - 23708500
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||||||||||||||||||| |||||| ||| | ||||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23708399 gcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttgatagttgaaccttggg 23708498  T
Q  108 gt 109  Q
    ||    
T  23708499 gt 23708500  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22337462 - 22337315
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||||||||||||||||||||||||||||| |   ||| |  | ||||||  || ||||| || |||||| |||||||| ||||||||||||    
T  22337462 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtta-ggtttttgtgacctttgttgcacgagttgttgagagttga 22337364  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  22337363 accttggagtagtattaagacttaatgatgatgttaattataatttgtg 22337315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23076788 - 23076642
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||||||||||||||||||||||||| ||| |   ||| | ||| |  || || |||||||| |||||| |||||||| |||||||||||||    
T  23076788 cgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaa 23076690  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    | |||||||||||||  ||||| |||||||||||||||||||||||||    
T  23076689 ctttggggtagtattgggattttatgatgatgttaattataatctgtg 23076642  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 27753921 - 27753775
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||| ||||||| |   ||| | ||| | | || |||||||||| ||| || |||||||| || ||||||||||    
T  27753921 cgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgcct-tgttagattttgcgaccttcgttgcacgagttgtcgagagttgaa 27753823  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
     |||||| ||| ||||||| ||||||||||||||||||||||| ||||    
T  27753822 gcttgggatagcattaagacttaatgatgatgttaattataatatgtg 27753775  T

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Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23660369 - 23660227
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||||||||||||||| |||||||| |   ||| | ||| |  || || ||||| || |||| | ||||||||  ||||||||||||    
T  23660369 cgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttttgtgacctttattgcacgagttattgagagttgaa 23660270  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataat 143  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||    
T  23660269 ccttggggtagtattgagacttattgatgatgttaattataat 23660227  T

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Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 23654220 - 23654307
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || |||||||||||||| |||||| ||||||| ||||||| || |||||||||||||||||    
T  23654220 gattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtagcattaagacttaatgaagaggttaattataatctgtg 23654307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 37891 - 38034
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||||| |||| |   ||||| || ||||||   || ||||||| |||||| |||||||| || |||||||||    
T  37891 cgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgtta--gactttgcgacctttgttgcacgagttgtcgagagttga 37988  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||| |||||| ||||||| ||||  |||| ||||||||||||||    
T  37989 acctttgggtaggattaagacttaacaatgaggttaattataatct 38034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 22731069 - 22731155
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttgggg-tagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| |||||||  ||||| | ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  22731069 ttttgcgatctttgttgcacgagctgttgataattgaaccttgggggtagtattaagacttaatgaggatgttaattataatctgtg 22731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 298589 - 298735
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||||||||||||||||||||||||||||| |   ||| | || ||||  || |||||||||| |||||| |||||||| ||||||  || |    
T  298589 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttg--ttagattttgcgacctttgttgcacgagttgttgaggattaa 298686  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| ||||||| ||||||| || ||||| |||||| ||||    
T  298687 acctttgggtagcattaagacttaatgaagaggttaactataatatgtg 298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 19672127 - 19672068
Alignment:
Q  48 aatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19672127 aatggttgtttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggg 19672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 32451704 - 32451850
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || ||||| |||    
T  32451704 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgagttgtcgagagatga 32451801  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||| ||||||| || |  ||||| ||||||| ||| ||||    
T  32451802 accttggggtagcattaagacttgaatatgatattaattacaatttgtg 32451850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 23060796 - 23060717
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataat 143  Q
    |||||||| ||||||  ||||||| ||||||| |||||| |||||||||||||  || |||||||||||||||||||||||    
T  23060796 ttttgcgacctttgtt-cacgagttgttgagaattgaactttggggtagtattgggacttaatgatgatgttaattataat 23060717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20309451 - 20309305
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||| ||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| | |||| |||||| | || |||||||||    
T  20309451 cgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta--gattttgcgacccttgttgcacgatttgtcgagagttga 20309354  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||| ||||||| ||||  |||| ||||| |||||||||||    
T  20309353 acccttgggtaggattaagacttaagaatgaggttaactataatctgtg 20309305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 20519976 - 20520076
Alignment:
Q  12 gtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggta 110  Q
    |||||||||||||||||||||||  |||| ||||| ||| | |||||| || ||||||||||||||| |||||||  |||  ||||| | ||||||||||    
T  20519976 gtagaggctctcgcctcgcgagttgcctagttacagaataccttgtttagggttttgcgatctttgttgcacgagatgttatgagtttatccttggggta 20520075  T
Q  111 g 111  Q
    |    
T  20520076 g 20520076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 23287659 - 23287600
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||| ||||||| |||| ||||||    
T  23287659 cttgtttagggttttgcgatctttgtcgcacgagatgttgtgagttgatccttagggtag 23287600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 22412915 - 22413019
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataa-tgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||||||||||||| ||||  || | ||||||||   ||||||| || |||||||||| |||||||| |||  |||   |||||| ||||||    
T  22412915 gcgagtagaggctctcgcctcgtgagttgcccagttacataacatcttgtttagggttttgcgatcattgtcgcatgagatgttattagttgatccttgg 22413014  T
Q  107 ggtag 111  Q
    |||||    
T  22413015 ggtag 22413019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31756264 - 31756232
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  31756264 cgccatggcgagtagaggctctcgcctcgcgag 31756232  T

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Target: scaffold0839 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1851 - 1947
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagtt 97  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1851 cgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagtt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 79109 - 79214
Alignment:
Q  7 ggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    ||||||||||||||||||||||||||||  || | ||||| ||  ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  79109 ggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgtttaggattttgcgatctttgtcgcacgagtcattgagagttgaaccttgg 79208  T
Q  107 ggtagt 112  Q
    ||||||    
T  79209 ggtagt 79214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16989 - 17135
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||| ||| ||||||||||||||||||||||||| |   ||| | | | |  || ||||||||||| |||||| |||||||| |||||||||| ||    
T  16989 cgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagttgttgagagttaaa 17088  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgt 147  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  17089 ccttggggtagtattgagacttaatcatgatgttaattataatctgt 17135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 225744 - 225643
Alignment:
Q  11 agtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggta 110  Q
    ||||||||| || ||||||||||| || || ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  225744 agtagaggcccttgcctcgcgagttacatagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggta 225645  T
Q  111 gt 112  Q
    ||    
T  225644 gt 225643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23229 - 23082
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||| ||||| |||||| ||||||||||||||||||||   ||| | || ||||||  || |||||||| |||||| |||||||| ||||||||||||    
T  23229 cgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgtta-ggtttttgcgacctttgttgcacgagttgttgagagttga 23131  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  23130 accttggggtagtattgagacttaatgatgatgttatttataatctgtg 23082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 25839 - 25983
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| | | |||| ||||    
T  25839 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagctgaa 25938  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  25939 ccttggggtagtattgagacttaatgatgatgttaattataatct 25983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33269 - 33410
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| | |||||||||||||||| |||||| |   ||| | ||| |  |  |||||||||||||| ||||  || ||| ||| |||||||||    
T  33269 cgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcatacaagttgttaagagttgaa 33368  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataa 142  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  33369 ccttggggtagtattgagacttaatgatgatgttaattataa 33410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 16374 - 16521
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||| ||||||||||||||||||||||||| |   ||| | ||| |  || |||||||||||||| |||||||| ||| |||  ||||||||    
T  16374 cgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagttgttaggagttgaa 16473  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  16474 ccttggggtagtattgagacttaatgatgatgttaattatagtctgtg 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20199 - 20310
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| |||||||||||||||||||||||| |||  |||| ||||| ||  ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  20199 cgccatggcgagtagaggctctcgcctcgcaagttgcctaattacagaagccttgtttaggattttgcggtctttgtcgcacgagtcgttgagagttgaa 20298  T
Q  101 ccttggggtagt 112  Q
    ||||||| ||||    
T  20299 ccttgggatagt 20310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 20594116 - 20593973
Alignment:
Q  5 acggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 104  Q
    |||||||| |||||||||||||||||||||||||||   ||| | ||| |  || |||||||||||||| |||||||| ||| ||| || ||||||||||    
T  20594116 acggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagggttgaacctt 20594017  T
Q  105 ggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||| ||| |||||||| ||| |||||||||||||||    
T  20594016 ggggtagtattgagacttaatgataatgataattataatctgtg 20593973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 29060887 - 29060740
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||||| |||||||||||||||||||||||||||||| |   ||| | ||| |  || ||||||||||| |||||| |||||||| | | |||| ||||    
T  29060887 cgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagctgaa 29060788  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  29060787 ccttggggtagtattgagacttaatgatgatattaattataatctgtg 29060740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 18457061 - 18456955
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaac 101  Q
    |||| ||||||||||||||||||||||||||||  || | ||||| ||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18457061 gccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgttcaggattttgcgatctttgtcgcacgagtcgttgagagttgaac 18456962  T
Q  102 cttgggg 108  Q
    |||||||    
T  18456961 cttgggg 18456955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 25629135 - 25629276
Alignment:
Q  7 ggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||| ||||||||||||||||||||||||| |   ||| | ||| |  || |||||||||||  ||||| |||||||| ||| |||||||||||||||    
T  25629135 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagttgttaagagttgaaccttgg 25629234  T
Q  107 ggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||    
T  25629235 ggtagtattgagacttaatgatgttgttaattataatctgtg 25629276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19303315 - 19303462
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||||||||||||||| |||||||| |   ||| | ||| |  || |||||||||||||| |||||||| ||| | | |||||||||    
T  19303315 cgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaa 19303414  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  19303415 ccttggggtagcactgagaattaatgatgatgttaattataatctgtg 19303462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 18409601 - 18409748
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||| | ||||||| |   ||| | ||| |  || ||||||| ||| |||||| ||||||||  ||||||||||||    
T  18409601 cgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgcacgagttattgagagttgaa 18409700  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  18409701 ccttagggtagtattgagacttaatgatgatgttaattataatatgtg 18409748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 20638058 - 20638204
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| | |||||||| |||||||||||||| |   ||| | ||| | | || |||||||||| |||||| |||||||| || ||||||||||    
T  20638058 cgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgagagttgaa 20638156  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| ||  ||||||| ||||||||||||||||||||||||||||    
T  20638157 ccttgggataacattaagacttaatgatgatgttaattataatctgtg 20638204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 25644662 - 25644558
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggg 107  Q
    |||||||||||| ||||||||||||||  ||   || || ||||||||||| || |||||||||||||||||||||||| | ||||||||||||||||||    
T  25644662 gcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtttttgcgatctttgtcgcacgagttgctgagagttgaaccttggg 25644563  T
Q  108 gtagt 112  Q
    |||||    
T  25644562 gtagt 25644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22831848 - 22831702
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||  ||||||||||| ||||||||||||| |||| |||||||||    
T  22831848 cgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgtt--ggattttgcgacctttgtcgcacgattcgtcgagagttga 22831751  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||| ||||||| || |  |||| ||||| |||||||||||    
T  22831750 acccttgggtagaattaagacttgagaatgaggttaactataatctgtg 22831702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 17287633 - 17287717
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||| |||||    
T  17287633 tttgctatctttgttgcacgagttgttgagagttgaaccttggggtagcattgagacttaatgaggatgttaattataacctgtg 17287717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 20360796 - 20360881
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| |||||| |||||||| ||||||  ||||||||| |||||||||||||| |||||||||| |||||||||||| ||||    
T  20360796 ttttgcgacctttgttgcacgagttgttgaggattgaacctttgggtagtattaagacttaatgatgaggttaattataatatgtg 20360881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 22780091 - 22780148
Alignment:
Q  91 gagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  22780091 gagagttgaaccttggggtagtataaagacttaatgatgatgttaatcataatctgtg 22780148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18821594 - 18821711
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| |||||| |||||||||||||||||||| |||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  18821594 cgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 18821691  T
Q  100 accttggggtagtattaaga 119  Q
    |||||||||||| |||||||    
T  18821692 accttggggtagcattaaga 18821711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16920408 - 16920551
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||| |||||| |||||||||||||| |||||||||| |   ||| | || ||||||  ||||||||||| |||||| |||||| |  | |||||||||    
T  16920408 cgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgtt--ggattttgcgacctttgttgcacgatttctcgagagttga 16920505  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||| | |||||| ||||||| ||||  |||| ||||| ||||||||    
T  16920506 acccttgggtagaattaagacttaagaatgaggttaactataatct 16920551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4667987 - 4668038
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgc 52  Q
    ||||| |||||||||||||||||||||||||||  ||| ||||||| |||||    
T  4667987 cgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgc 4668038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 18696783 - 18696724
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  18696783 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 18696724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 20224239 - 20224180
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  20224239 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 20224180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 22118223 - 22118164
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  22118223 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 22118164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 25603223 - 25603306
Alignment:
Q  65 ttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||| ||||||| |||| | | ||||||||||||| ||||||  |||||| ||||||| |||||| | || ||||||||    
T  25603223 ttgcgatctgtgtcgcatgagttgcttagagttgaacctttgggtagctttaagacttaatgacgatgtttaatagaatctgtg 25603306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 4189297 - 4189252
Alignment:
Q  7 ggcgagtagaggctctcgcctcgcgagtgacctatttacataatgc 52  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||    
T  4189297 ggcgagtagaggctctcgcctcgcgagctacccatttacagaatgc 4189252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 4674840 - 4674885
Alignment:
Q  7 ggcgagtagaggctctcgcctcgcgagtgacctatttacataatgc 52  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||    
T  4674840 ggcgagtagaggctctcgcctcgcgagctacccatttacagaatgc 4674885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4185597 - 4185629
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  4185597 cgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22080511 - 22080543
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  22080511 cgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8821 - 8675
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    ||||||||| |||||||||||||||||||||| ||||| |   ||| | || ||||||  |  |||||||| |||||| |||||||| ||||||||||||    
T  8821 cgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttagg--ttttgcgacctttgttgcacgagttgttgagagttga 8724  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  8723 accttggagtagtattaagacttaatgatgatgttaattacaatctgtg 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 52258 - 52113
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||  | || ||||||  |  |||||||| ||| || |||||||| ||||||||||||    
T  52258 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg--ttttgcgacctt-gttgcacgagttgttgagagttga 52162  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52161 accttggggtagtattaagacttaatgatgatgttaattataatctgtg 52113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 167754 - 167897
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||| | || |||||||||    
T  167754 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgaattgtcgagagttga 167851  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||| |||||| ||||||| ||||||| || ||||||||||||||    
T  167852 acctttgggtagcattaagacttaatgaagaggttaattataatct 167897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 39823 - 39679
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  |  |||||||||||||| |||||||| ||| ||| || ||||||    
T  39823 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcgcacaagttgttaagggttgaa 39724  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  39723 ccttggggtagtattgagacttaataatgatgttaattataatct 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 74989 - 75133
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||| |  |  |||||||||||||| |||||||| ||| ||| || ||||||    
T  74989 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcgcacaagttgttaagggttgaa 75088  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  75089 ccttggggtagtattgagacttaataatgatgttaattataatct 75133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12276 - 12165
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    ||||| ||||||||||||||||| ||||||||||  || | ||||| ||  | ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  12276 cgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaagccctgtttaggattttgcgatctttgtcacacgagtcgttgagagttgaa 12177  T
Q  101 ccttggggtagt 112  Q
    ||||||||||||    
T  12176 ccttggggtagt 12165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20749 - 20603
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||||||||||||||||||| ||||||   ||| | ||| | | || |||||||||| |||||| |||||||| || ||||||||||    
T  20749 cgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgagagttgaa 20651  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||  ||| ||||||| |||||||||||||||| |||||||||||    
T  20650 ccttggaatagcattaagacttaatgatgatgttaactataatctgtg 20603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13557 - 13411
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||    || | ||| | | || |||||||||| |||||| |||||||| || || |||||||    
T  13557 cgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgacagttgaa 13459  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||| ||||    
T  13458 ccttgggatagcattaagacttaatgatgatgttaattataatttgtg 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 28177 - 28030
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| | ||||||||||||||||||||||| |   ||| | ||| |  |  ||||||||| |||| |||||||| ||| ||| |||||||||    
T  28177 cgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcaatctgtgtcgcacaagttgttaagagttgaa 28078  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  28077 ccttggggtagtattgagacttaatgatgatgttaattataacctgtg 28030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 10510 - 10363
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||  || ||||||||||||||||||   ||| | ||| |  || |||||||||||||| |||||||| ||| ||| |||||||||    
T  10510 cgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagagttgaa 10411  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  10410 ccttggggtagtattgagacttaataatgatgttaataataatctgtg 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 24076 - 24222
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||| ||||| |||||||||||||||||||||||||||   ||| | ||| | | || |||||||||| |||||| |||||||| || ||||||||||    
T  24076 cgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgcct-tgttagattttgcgacctttgttgcacgagttgtcgagagttgaa 24174  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    | ||||| ||||||||||| ||| ||| ||||||||||||||||||||    
T  24175 ctttgggatagtattaagacttattgaggatgttaattataatctgtg 24222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 339725 - 339871
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   | | | ||| |  || || |||||||| |||||| |||||||||||| || ||||||    
T  339725 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgttagg-ttttgcgacctttgttgcacgagtcgttaagggttgaa 339823  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  339824 ccttggggtagtattgagacttaatgatgacgttaattataatctgtg 339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 124931 - 124785
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   | | | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  124931 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 124834  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| ||| ||||||| ||||||| ||||||||||||||||||||    
T  124833 accttgggatagcattaagacttaatgaggatgttaattataatctgtg 124785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6956 - 6811
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| ||  ||| | || | ||||   |||||||||| |||||| |||||||| || |||||||||    
T  6956 cgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 6859  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgt 147  Q
    ||||| |||||| |||||||||||||||| | |||| |||||||||||    
T  6858 acctttgggtaggattaagatttaatgataaggttatttataatctgt 6811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3816 - 3673
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | ||  |  || || |||||||| |||||| |||||||| ||||||| |||||    
T  3816 cgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaa 3718  T
Q  101 ccttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    | ||||||||||||||||| ||||||| |||||||||||||||||    
T  3717 ctttggggtagtattaagacttaatgaggatgttaattataatct 3673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 689 - 547
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||| ||||||||||||||||||||||||||||||||| |   ||| | || ||||||  || |||||| | |||||| ||| |||| ||||||||||||    
T  689 cgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtta-ggtttttgcaacctttgttgcatgagttgttgagagttga 591  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataat 143  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||    
T  590 accttggggtagtattgagacttaatgaggatgttaattataat 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 61; Significance: 2e-26; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 4795 - 4707
Alignment:
Q  60 ggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||  |||||||| ||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  4795 ggattttgcgatcagtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 12377 - 12289
Alignment:
Q  60 ggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||  |||||||| ||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12377 ggattttgcgatcagtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 12289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 22329 - 22241
Alignment:
Q  60 ggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||  |||||||| ||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  22329 ggattttgcgatcagtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 22241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 2987 - 3072
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| || ||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  2987 ttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtg 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 17823 - 17908
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  17823 ttttgcgacctttgttgcacgagttgttgagaattgaacctttgggtagtattaagacttaatgaggatgttaattataatctgtg 17908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13438 - 13292
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||  | || ||||||  |  |||||||| |||||| |||||||| ||||||||||||    
T  13438 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg--ttttgcgacctttgttgcacgagttgttgagagttga 13341  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || |||||||||||||  || ||||||| ||||||||||||||||||||    
T  13340 actttggggtagtattgggacttaatgaagatgttaattataatctgtg 13292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 26183 - 26095
Alignment:
Q  60 ggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||| |||||| |||||| | |||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  26183 ggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgaggatgttaattataatctgtg 26095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 40203 - 40057
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||| ||||||||   ||  | ||| ||||| || ||||||||| |||||| |||| | | ||||||||||||    
T  40203 cgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatg-attttgcgacctttgttgcacaatttgttgagagttga 40105  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||| ||| ||| ||||||| ||||||||||||||| ||||    
T  40104 acctt-gggtagcattgagacttaatgaggatgttaattataatttgtg 40057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 11347 - 11434
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| |||||| |||||||| || |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  11347 gattttgcgacctttgttgcacgagttgtagagagttgaacctttgggtagaattaagacttaatgatgaggttaattataatctgtg 11434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 2138 - 2051
Alignment:
Q  61 gattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| || |||||| |||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  2138 gattttgtgacctttgttgcacgagttgtcgagagttgaaccttgggatagtattaagacttaatgaggatgttaattataatctgtg 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 207359 - 207406
Alignment:
Q  66 tgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  207359 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagta 207406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 824 - 967
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||| | || |||||||||    
T  824 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgaattgtcgagagttga 921  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    ||||| |||||| ||||||| ||||||| || ||||||||||||||    
T  922 acctttgggtagcattaagacttaatgaagaggttaattataatct 967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 21257 - 21111
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||| |||||||| |   ||| | || ||||||  |  |||||||| |||||| |||||||| | | ||||||||    
T  21257 cgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgttgag--ttttgcgacctttgttgcacgagttgatcagagttga 21160  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||| |||||||||||||| ||||||| |||||||||||||| |||||    
T  21159 acctttgggtagtattaagacttaatgaagatgttaattataacctgtg 21111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 32733 - 32880
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||| ||||| |||||||| |||||||||||||||| ||  ||| |||| ||||||  |||||||||||||| |||||||| | | ||| ||||||||    
T  32733 cgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgtta-ggattttgcgatctgtgtcgcaccaattgttaagagttga 32831  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||| | | ||| ||| | ||||| ||||||||||||    
T  32832 accttggggtagtattgaaacttattgaaggtgttagttataatctgtg 32880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 46272 - 46125
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||| ||||| |||||||| |||||||||||||||| ||  ||| |||| ||||||  |||||||||||||| |||||||| | | ||| ||||||||    
T  46272 cgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgtta-ggattttgcgatctgtgtcgcaccaattgttaagagttga 46174  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||||||| | | ||| ||| | ||||| ||||||||||||    
T  46173 accttggggtagtattgaaacttattgaaggtgttagttataatctgtg 46125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 16372 - 16323
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagt 112  Q
    |||||||| |||||| |||||||| |||||||||||||||||| ||||||    
T  16372 ttttgcgacctttgttgcacgagttgttgagagttgaaccttgaggtagt 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 8307 - 8454
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||| ||||||||||||||||||||||||||||| |   ||| | || ||||||  |  |||||||| ||| || |||||||| ||||||||||||    
T  8307 cgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg--ttttgcgaccttcgttgcacgagttgttgagagttga 8404  T
Q  100 accttgggg-tagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    || |||||| |||||||  || ||||||| ||||||||||||||||||||    
T  8405 acgttgggggtagtattgggacttaatgaggatgttaattataatctgtg 8454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2298 - 2172
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||||||||||||   ||| | || | ||||   |||||||||| |||||| |||||||| || |||||||||    
T  2298 cgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 2201  T
Q  100 accttggggtagtattaagatttaatgat 128  Q
    ||||| |||||| ||||||| ||||||||    
T  2200 acctttgggtaggattaagacttaatgat 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 5897 - 6036
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaac 101  Q
    ||||||||||| ||||||||||||||||  ||||||| |   ||| | ||| | | || |||||||||| |||||| ||||||||  | |||||| ||||    
T  5897 gccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgcct-tgttagattttgcgacctttgttgcacgagttatcgagagtggaac 5995  T
Q  102 cttggggtagtattaagatttaatgatgatgttaattataa 142  Q
    |||||| ||| ||||||| ||||||||||||||||||||||    
T  5996 cttgggatagcattaagacttaatgatgatgttaattataa 6036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 1198 - 1114
Alignment:
Q  64 tttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||| |||||| |||||||| |||||||||||||| || |||||||||||||| ||||||| || | |||||||||||||||    
T  1198 tttgcgacctttgttgcacgagttgttgagagttgaacttttgggtagtattaagacttaatgaagaggctaattataatctgtg 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 3757 - 3681
Alignment:
Q  72 ctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||| || | |||||||||||||||    
T  3757 ctttgttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatgaagaggctaattataatctgtg 3681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 7821 - 7745
Alignment:
Q  72 ctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||| || | |||||||||||||||    
T  7821 ctttgttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatgaagaggctaattataatctgtg 7745  T

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Target: scaffold0070 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 4811 - 4723
Alignment:
Q  60 ggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||||||||||| |||||| |||||||| ||| |||||||||||||| ||||||||| ||| ||| ||| ||||||||||||||| ||||    
T  4811 ggattttgcgacctttgttgcacgagttgttaagagttgaaccttgaggtagtattgagacttattgaagatgttaattataatttgtg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 13471 - 13365
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    ||||||| |||| ||||||||  ||||  |||| ||||| ||||| |||||| ||||||||||||||||||||||||||| |||  ||||| ||||||||    
T  13471 gcgagtataggccctcgcctcatgagttgcctagttacagaatgccttgtttaggattttgcgatctttgtcgcacgagttgttatgagttaaaccttgg 13372  T
Q  107 ggtagta 113  Q
    |||||||    
T  13371 ggtagta 13365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 15879 - 15985
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    ||||||| |||| ||||||||||||||  || | ||||| ||||| |||||| ||||||||||||||||||||||| ||| |||  |||||||||||| |    
T  15879 gcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatgagttgaacctttg 15978  T
Q  107 ggtagta 113  Q
    |||||||    
T  15979 ggtagta 15985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10201 - 10347
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||| ||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| | |||| |||||||| || |||||||||    
T  10201 cgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgaccattgttgcacgagttgtcgagagttga 10298  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||| ||||||| ||||| || | |||||||||||||||||    
T  10299 acccttgggtagaattaagacttaataataaggttaattataatctgtg 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13841 - 13695
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||||||||||||| |||| |   ||| | || ||||||   ||||||||||  ||||| |||||||| || |||||||||    
T  13841 cgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta--gattttgcgacttttgttgcacgagttgtcgagagttga 13744  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||  ||||| ||||||| ||||  |||| |||||||||||||||||    
T  13743 acctttcggtaggattaagacttaacaatgaggttaattataatctgtg 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 60494 - 60598
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgacctatttacataatgc-ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 106  Q
    |||||||||||||||||||||||||||  || | ||||| ||| | |||||| || ||||| |||||||||||||||||  |||  ||||||||||||||    
T  60494 gcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgagatgttatgagttgaaccttgg 60593  T
Q  107 ggtag 111  Q
    |||||    
T  60594 ggtag 60598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 130254 - 130154
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggat-tttgcgatctttgtcgcacgagtcgttgagagttg 98  Q
    ||||| |||||| ||||||||||||||||||||  | ||| ||||| |||| ||||||| ||||   ||||||||||||||||||||| | || ||||||    
T  130254 cgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttg 130155  T
Q  99 a 99  Q
    |    
T  130154 a 130154  T

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Target: scaffold0718 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 4962 - 5052
Alignment:
Q  58 ttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||| || |||||| |||||||| || |||||||||||| | |||||| ||||||||||||| || | |||||||||||| ||||    
T  4962 ttggattttgagacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagatttaataataaggttaattataatatgtg 5052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 16622 - 16479
Alignment:
Q  4 cacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacc 102  Q
    ||||||||| |||||||||||||||||||||||||||   ||| | || ||||  |||||||||| || |||||| |||||| |  | |||||||||||     
T  16622 cacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttg--ttggattttgtgacctttgttgcacgatttctcgagagttgaacg 16525  T
Q  103 ttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
     | |||||| ||||||| ||||| |||| ||||| |||||||||||    
T  16524 cttgggtaggattaagacttaataatgaggttaactataatctgtg 16479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 32409 - 32264
Alignment:
Q  2 gccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaac 101  Q
    ||||||||||| ||||||||||||||||||||||||| |   ||| | |   | ||||| ||||||||| |||||| || | ||| || |||||||||||    
T  32409 gccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagttacttttttg-attttgcgacctttgttgctctagttgtcgagagttgaac 32311  T
Q  102 cttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    | | |||||| ||||||| ||||  |||| |||||||||||||||||    
T  32310 ccttgggtaggattaagacttaacaatgaggttaattataatctgtg 32264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 1628 - 1489
Alignment:
Q  5 acggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacct 103  Q
    |||||||| |||||||||||||||||||||||||||   ||| | || ||||  ||||| ||||||| |||||| |||||||| || |||||||| |||     
T  1628 acggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttg--ttggagtttgcgacctttgttgcacgagttgtcgagagttggaccc 1531  T
Q  104 tggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    | |||||| ||||||| ||||  |||| ||||| ||||||||    
T  1530 ttgggtaggattaagacttaagaatgaggttaactataatct 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 7605 - 7466
Alignment:
Q  5 acggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaacct 103  Q
    |||||||| |||||||||||||||||||||||||||   ||| | || ||||  ||||| ||||||| |||||| |||||||| || |||||||| |||     
T  7605 acggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttg--ttggagtttgcgacctttgttgcacgagttgtcgagagttggaccc 7508  T
Q  104 tggggtagtattaagatttaatgatgatgttaattataatct 145  Q
    | |||||| ||||||| ||||  |||| ||||| ||||||||    
T  7507 ttgggtaggattaagacttaagaatgaggttaactataatct 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15240 - 15386
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||| ||| ||||||||||||||||||||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  15240 cgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 15337  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
      | | |||||| ||||||| ||||| || | |||||||||||||||||    
T  15338 ctcgttgggtaggattaagacttaataataaggttaattataatctgtg 15386  T

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Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 51659 - 51805
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| |||||||||| |||||| ||||||| |   ||| | || ||||||   |||||||||| |||||| |||||||| || |||||||||    
T  51659 cgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtta--gattttgcgacctttgttgcacgagttgtcgagagttga 51756  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||||||||| ||||||| || |  ||||| ||||||| ||| ||||    
T  51757 accttggggtagcattaagacttgaatatgatattaattacaatttgtg 51805  T

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Target: scaffold0395 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 796 - 868
Alignment:
Q  60 ggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatg 132  Q
    ||||||| ||| |||||| |||||||  |||||||||||||||||| ||||||||| ||| |||||| |||||    
T  796 ggatttttcgacctttgttgcacgagctgttgagagttgaaccttgaggtagtattgagacttaatggtgatg 868  T

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Target: scaffold0125 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45564 - 45664
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggat-tttgcgatctttgtcgcacgagtcgttgagagttg 98  Q
    ||||| |||||||||||||||||||||||||||  | ||| ||||| |||| ||||||| ||||   ||||||||||||||||||||| | || ||||||    
T  45564 cgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttg 45663  T
Q  99 a 99  Q
    |    
T  45664 a 45664  T

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Target: scaffold0403 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5194 - 5155
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgaccta 40  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  5194 cgccacggcgagtagaggctcttgcctcgcgagtgaccta 5155  T

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Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 827 - 973
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg-cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttga 99  Q
    |||||||||||| ||||||||||||||||||||| ||| |   ||| | || ||||  || |||||||| | |||||| |||||| | || |||||||||    
T  827 cgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttg--ttagattttgcaacctttgttgcacgatttgtcgagagttga 924  T
Q  100 accttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    ||| | |||||| ||||||  ||||  |||| ||||| |||||||||||    
T  925 acccttgggtaggattaagtcttaagaatgaggttaactataatctgtg 973  T

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Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 220 - 135
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||| | |||||| |||||||| || || ||||||||||| |||||| ||||||| ||||  |||| ||||| |||||||||||    
T  220 ttttgcaacctttgttgcacgagttgtcgacagttgaacctttgggtaggattaagacttaacaatgaggttaagtataatctgtg 135  T

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Target: scaffold0358; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 4996 - 4911
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 148  Q
    |||||| | |||||| |||||||| || || ||||||||||| |||||| ||||||| ||||  |||| ||||| |||||||||||    
T  4996 ttttgcaacctttgttgcacgagttgtcgacagttgaacctttgggtaggattaagacttaacaatgaggttaagtataatctgtg 4911  T

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Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51925 - 51888
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  51925 cgccacggcgagcagaggctctcgcctcgcgagtgacc 51888  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 16745 - 16801
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgggg 108  Q
    ||||||| || |||||||||||||||||||||||| ||| |||| | ||||||||||    
T  16745 cttgtttagggttttgcgatctttgtcgcacgagttgttaagagataaaccttgggg 16801  T

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Target: scaffold0046; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 25905 - 25961
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgggg 108  Q
    ||||||| || ||||||||||||| |||||||||| ||| |||| | ||||||||||    
T  25905 cttgtttagggttttgcgatctttatcgcacgagttgttaagagataaaccttgggg 25961  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9423 - 9372
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatgc 52  Q
    ||||| |||||||||||||||||||||||||||  ||| ||||||| |||||    
T  9423 cgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgc 9372  T

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Target: scaffold0356 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 486 - 545
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  486 cttgtttagggttttgcgatctttgtcgcacgagatgttacgagttgatccttggggtag 545  T

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Target: scaffold0169 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 29248 - 29307
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  29248 cttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 29307  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 85841 - 85782
Alignment:
Q  52 cttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    ||||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  85841 cttgtttagggttttgcgatctttgtcgcacgagatgttacgagttgatccttggggtag 85782  T

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Target: scaffold1984 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 477 - 427
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacctatttacataatg 51  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||| ||||    
T  477 cgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatg 427  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 55510 - 55568
Alignment:
Q  53 ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  55510 ttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 55568  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 24423 - 24481
Alignment:
Q  53 ttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||| || |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  24423 ttgtttaggtttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 24481  T

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Target: scaffold0628 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2576 - 2609
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagt 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  2576 cgccatggcgagtagaggctctcgcctcgcgagt 2609  T

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Target: scaffold0627 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 251 - 214
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  251 cgccacagcgagtagaggctctcgccacgcgagtgacc 214  T

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Target: scaffold0247 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6569 - 6606
Alignment:
Q  1 cgccacggcgagtagaggctctcgcctcgcgagtgacc 38  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  6569 cgccacggcgagcagaggctctcgcctcgcaagtgacc 6606  T

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Target: scaffold0260 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 8424 - 8364
Alignment:
Q  51 gcttgttttggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||||| || |||||||||||||||||||||||  |||  ||||| | |||||||||||    
T  8424 gcttgtttagggttttgcgatctttgtcgcacgagatgttatgagttaatccttggggtag 8364  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 9677 - 9721
Alignment:
Q  69 gatctttgtcgcacgagtcgttgagagttgaaccttggggtagta 113  Q
    |||||||||||||||||| |||  ||||||||||||||| |||||    
T  9677 gatctttgtcgcacgagttgttatgagttgaaccttgggatagta 9721  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 9920 - 9968
Alignment:
Q  63 ttttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 111  Q
    |||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  9920 ttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 9968  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 10868 - 10836
Alignment:
Q  8 gcgagtagaggctctcgcctcgcgagtgaccta 40  Q
    ||||||||||||||||||||||||||| |||||    
T  10868 gcgagtagaggctctcgcctcgcgagttaccta 10836  T

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