View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1306_low_46 (Length: 222)
Name: NF1306_low_46
Description: NF1306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1306_low_46 |
 |  |
|
| [»] scaffold0036 (2 HSPs) |
 |  |  |
|
| [»] scaffold0620 (2 HSPs) |
 |  |  |
|
| [»] scaffold0236 (1 HSPs) |
 |  |  |
|
| [»] scaffold0572 (1 HSPs) |
 |  |  |
|
| [»] scaffold0127 (1 HSPs) |
 |  |  |
|
| [»] scaffold0200 (1 HSPs) |
 |  |  |
|
| [»] scaffold0119 (1 HSPs) |
 |  |  |
|
| [»] scaffold1613 (1 HSPs) |
 |  |  |
|
| [»] scaffold0068 (1 HSPs) |
 |  |  |
|
| [»] scaffold0157 (1 HSPs) |
 |  |  |
|
| [»] scaffold0050 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 179; Significance: 9e-97; HSPs: 30)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 26474808 - 26475022
Alignment:
| Q |
1 |
agtccagaagttgaggggcgtctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26474808 |
agtccagaagttgaggggcgtctagtgatttgtttttggagtttggtgggccgatcacttttgattcgagatcgagagttagtttcttgtctcaagctgt |
26474907 |
T |
 |
| Q |
101 |
tttggcgtgtttttgtgtcttcttctacagactgaggattgatcggtggtggaagttgaattggttcagaatttcgactaagttggggtgatgaggtgag |
200 |
Q |
| |
|
|||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26474908 |
tttggcgtgtttttgtgtttttttttatagactgaggattgatcggtggtggaagttgaattggttcagaatttcggctaagttggggtgatgaggtgag |
26475007 |
T |
 |
| Q |
201 |
gtgttgtctgtggtg |
215 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
26475008 |
gtgttgtttgtggtg |
26475022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 39041358 - 39041297
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
39041358 |
tgatttgtttacagagtctggtgggccgatcacttttgattcgagatcaggagtcagtttct |
39041297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 4305736 - 4305780
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
4305736 |
agtctggtggggcgatcacttttgattcgagatcgggagttagtt |
4305780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 21387288 - 21387240
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||| | |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21387288 |
tgatttggtgctggagtctggtggaccgatcacttttgattcgagatcg |
21387240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 31050746 - 31050698
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
31050746 |
tgatttggttctaaagtctggtgggccgatcacttttgattcgagatcg |
31050698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 40813853 - 40813817
Alignment:
| Q |
38 |
ggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40813853 |
ggagtctggtgggccgatcacttttgattcgagatcg |
40813817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 2165504 - 2165582
Alignment:
| Q |
25 |
gtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgttttg |
104 |
Q |
| |
|
||||||||||||| |||| |||| |||||||| ||||||||| ||||||| |||| |||||||| |||||||| ||||| |
|
|
| T |
2165504 |
gtgatttgtttctagagtttggt-ggccgatcgcttttgatttgagatcgggagtcagtttcttgactcaagcttttttg |
2165582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 36962699 - 36962652
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
||||||| || ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36962699 |
tgatttggttttggagtctggtgggccgattacttttgattcgagatc |
36962652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 37707427 - 37707392
Alignment:
| Q |
38 |
ggagtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
37707427 |
ggagtctggtgggccgatcacttttgattcgagatc |
37707392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 49747524 - 49747582
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||||||||||| |||||||||||| |||| |
|
|
| T |
49747524 |
tgatttggttctaaagtctggtgagccgatcacttttgatttgagatcgagagtcagtt |
49747582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 53756767 - 53756801
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
53756767 |
agtctggtgggccgatcacttttgattcgagatcg |
53756801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 2061808 - 2061764
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||| |||| |
|
|
| T |
2061808 |
agtctggtgggctgatcacttttgattcgagattgagagtcagtt |
2061764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 25753183 - 25753227
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||| |||| |
|
|
| T |
25753183 |
agtctggtggggcgatcacttttgattcgagatcgggagtcagtt |
25753227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 38929838 - 38929882
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
38929838 |
agtctgctgggccgatcacttttgattcgagatcaagagtcagtt |
38929882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 39421080 - 39421044
Alignment:
| Q |
43 |
ctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39421080 |
ctggtgggccgatcacttttgattcgagatcgggagt |
39421044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 38637302 - 38637263
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
38637302 |
agtctggcgggccgatcacttttgattcgagatcgggagt |
38637263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 46698869 - 46698811
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| | ||| |||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
46698869 |
tgatttggtcctgtagtctggtgggccgattgcttttgattcgagatcgggagtcagtt |
46698811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 2792345 - 2792296
Alignment:
| Q |
39 |
gagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
2792345 |
gagtctagtaggccgatcacttttgattcgagatcggaagtcagtttctt |
2792296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 6600029 - 6599976
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||||||||| ||||||| |||| |
|
|
| T |
6600029 |
tgatttggctctagagtctggtgggccgatcgcttttgattagagatcgggagt |
6599976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 8255038 - 8255071
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
8255038 |
agtctggtgggccgatcacttttgatccgagatc |
8255071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 8268456 - 8268489
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
8268456 |
agtctggtgggccgatcacttttgatccgagatc |
8268489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 2825780 - 2825828
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||| |||| |||| ||||||||||||| |||||||||||||||| |
|
|
| T |
2825780 |
tgatttggttctaaagtccggtgggccgatcatttttgattcgagatcg |
2825828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 12296055 - 12296099
Alignment:
| Q |
36 |
ctggagtctggtgggccgatcacttttgattcgagatcgagagtt |
80 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
12296055 |
ctggattctggtgggccgattacttttgcttcgagatcgggagtt |
12296099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 12470049 - 12470109
Alignment:
| Q |
27 |
gatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
||||||||| |||||||||||| ||| |||| ||||| |||||||| | |||| ||||||| |
|
|
| T |
12470049 |
gatttgtttatggagtctggtgtgccaatcaattttgcttcgagattgggagtcagtttct |
12470109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 12470618 - 12470678
Alignment:
| Q |
27 |
gatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
||||||||| |||||||||||| ||| |||| ||||| |||||||| | |||| ||||||| |
|
|
| T |
12470618 |
gatttgtttatggagtctggtgtgccaatcaattttgcttcgagattgggagtcagtttct |
12470678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 12489818 - 12489878
Alignment:
| Q |
27 |
gatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
||||||||| |||||||| ||| ||| |||| ||||| |||||||| | |||||||||||| |
|
|
| T |
12489818 |
gatttgtttatggagtctagtgtgccaatcaattttgcttcgagattgggagttagtttct |
12489878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 16501729 - 16501781
Alignment:
| Q |
27 |
gatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||| | ||| ||| ||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
16501729 |
gatttgatcctgaagtttggtgggccgatcgcttttgattcgagatcgggagt |
16501781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 22811230 - 22811186
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||| |||| |||| |
|
|
| T |
22811230 |
agtctggtgggccgatcattttttattcgagatcgggagtcagtt |
22811186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 35800486 - 35800534
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||| ||||| ||||||||| |||||| ||||||||||||||||| |
|
|
| T |
35800486 |
tgatttggttctgaagtctggtgaaccgatcgcttttgattcgagatcg |
35800534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 53823491 - 53823447
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| |||| |||| |
|
|
| T |
53823491 |
agtctggtggaccaatcacttttgattcgagatcgggagtcagtt |
53823447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 69542 - 69328
Alignment:
| Q |
3 |
tccagaagttgaggggcgtctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgttt |
102 |
Q |
| |
|
||||| |||||| ||| | |||||||||||||||||||||||| || || |||||||||||||| |||||||||| | ||||||| |||||| | ||| |
|
|
| T |
69542 |
tccaggagttgaagggtgcctagtgatttgtttctggagtctgatgtgctgatcacttttgatttgagatcgagattcagtttctatactcaagtttttt |
69443 |
T |
 |
| Q |
103 |
tg-------------gcgtgtttttgtgtcttcttctacagactgaggattgatcggtggtggaagttgaattggttcagaatttcgactaagttggggt |
189 |
Q |
| |
|
| |||| |||| | ||||||| | |||||||||||||||||||||||||||| |||||| |||| ||| |||| ||| |||| ||| |
|
|
| T |
69442 |
tttttttttttttttgcgtattttggcgtcttctccgacagactgaggattgatcggtggtggaatctgaattagttcggaaattcggctatgttgtggt |
69343 |
T |
 |
| Q |
190 |
gatgaggtgaggtgt |
204 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
69342 |
gatgaggtgaggtgt |
69328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 64401 - 64186
Alignment:
| Q |
3 |
tccagaagttgaggggcgtctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgttt |
102 |
Q |
| |
|
||||| |||||| ||| | |||||||||||||||||||||||| || || |||||||||||||| |||||||||| | ||||||| |||||| | ||| |
|
|
| T |
64401 |
tccaggagttgaagggtgcctagtgatttgtttctggagtctgatgtgctgatcacttttgatttgagatcgagattcagtttctatactcaagtttttt |
64302 |
T |
 |
| Q |
103 |
tg--------------gcgtgtttttgtgtcttcttctacagactgaggattgatcggtggtggaagttgaattggttcagaatttcgactaagttgggg |
188 |
Q |
| |
|
| |||| |||| | ||||||| | |||||||||||||||||||||||||||| |||||| |||| ||| |||| ||| |||| || |
|
|
| T |
64301 |
ttttttttttttttttgcgtattttggcgtcttctccgacagactgaggattgatcggtggtggaatctgaattagttcggaaattcggctatgttgtgg |
64202 |
T |
 |
| Q |
189 |
tgatgaggtgaggtgt |
204 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
64201 |
tgatgaggtgaggtgt |
64186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 34105407 - 34105472
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
34105407 |
tagtgatttgtttctagagtttggtgggccgatcacttttgattcgagatcgggagtcagtttctt |
34105472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 20970492 - 20970427
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| ||||||||||| ||| ||| |||||||| |
|
|
| T |
20970492 |
tagtgatttgtttctagagtctggtgagccgatcacatttgattcgaggacgaaagtcagtttctt |
20970427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 26216089 - 26216045
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
26216089 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
26216045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26534803 - 26534757
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26534803 |
tgatttggtcctgaagtctggtgggccgatcacttttgattcgagat |
26534757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 32935423 - 32935365
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| | ||| ||||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
32935423 |
tgatttggtcctgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagtt |
32935365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 34092792 - 34092838
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
|||||||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
34092792 |
tgatttgtctttggagtctggtgagccgatcacttttgattcgagat |
34092838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 20701870 - 20701829
Alignment:
| Q |
43 |
ctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20701870 |
ctggtgtgccgatcacttttgattcgagatcgggagttagtt |
20701829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 21266127 - 21266168
Alignment:
| Q |
43 |
ctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
21266127 |
ctggtgggccgatcgcttttgattcgagatcgggagttagtt |
21266168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 16510371 - 16510327
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
16510371 |
agtctagtgggccgatcacttttgattcgagattgagagtcagtt |
16510327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 20499916 - 20499964
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||| ||||||||| |||||| |||||| ||||||||||||||||| |
|
|
| T |
20499916 |
tgatttgattctggagtatggtggaccgatcgcttttgattcgagatcg |
20499964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 34090373 - 34090421
Alignment:
| Q |
39 |
gagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||| |||| ||||||| |
|
|
| T |
34090373 |
gagtctggtgggtcgatcaattttgattcgagatcgggagtcagtttct |
34090421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 7546500 - 7546465
Alignment:
| Q |
39 |
gagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7546500 |
gagtctggtggaccgatcacttttgattcgagatcg |
7546465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 13423482 - 13423516
Alignment:
| Q |
45 |
ggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13423482 |
ggtggaccgatcacttttgattcgagatcgagagt |
13423516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 9239282 - 9239221
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||| |||||||||| |||| ||||||| |
|
|
| T |
9239282 |
tgatttgtttttggagtacggtgggccgatcgtttttgcttcgagatcgggagtcagtttct |
9239221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 3117508 - 3117548
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| |||| |
|
|
| T |
3117508 |
tggtgggccgatcacttttgattcaagatcgggagtcagtt |
3117548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 9224052 - 9224096
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |||| |||| |
|
|
| T |
9224052 |
agtctggtgggctgatcgcttttgattcgagatcgggagtcagtt |
9224096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 4162121 - 4162056
Alignment:
| Q |
9 |
agttgaggggcgtctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4162121 |
agttgaggggtgcctagtgatttgtgttgggagtctggtgggccgatcacttttgattcgagatcg |
4162056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 14405195 - 14405248
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14405195 |
tgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagt |
14405248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 16959993 - 16960037
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
16959993 |
agtctggtgggccgatcgcttttgattcgagatcgagagtcagtt |
16960037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 22885203 - 22885159
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
22885203 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
22885159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 37830996 - 37831128
Alignment:
| Q |
22 |
ctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgttttggcgtgtttttgtgtctt |
121 |
Q |
| |
|
|||||||||||||||| |||| ||| |||||||||||||||||||| ||| ||| |||||||| |||||| | ||||| | | |||| ||||||| |
|
|
| T |
37830996 |
ctagtgatttgtttctaaagtcaggtaagccgatcacttttgattcgaaatctgaagtcagtttcttgactcaagtttttttgccatattttggtgtctt |
37831095 |
T |
 |
| Q |
122 |
cttctacagactgaggattgatcggtggtggaa |
154 |
Q |
| |
|
|| | || || |||||||||| |||||||||| |
|
|
| T |
37831096 |
ctacgacgaaccgaggattgattggtggtggaa |
37831128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 10524108 - 10524147
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10524108 |
agtctggtgggccgatcacttttgattcgagatcgggagt |
10524147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 1269494 - 1269528
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
1269494 |
agtctggtgggccgatcacttttgattcgagatcg |
1269528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 8520396 - 8520446
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
||||||||||||||| ||||||| ||| || |||||||||||||||||||| |
|
|
| T |
8520396 |
tagtgatttgtttctagagtctgatggaccaatcacttttgattcgagatc |
8520446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 23665486 - 23665440
Alignment:
| Q |
28 |
atttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||| || ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23665486 |
atttgtatcgggagtctagtgggccgatcacttttgattcgagatcg |
23665440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 7874288 - 7874341
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
7874288 |
tgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagt |
7874341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 4471930 - 4471978
Alignment:
| Q |
36 |
ctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||| |||| |||| |
|
|
| T |
4471930 |
ctggagtctggtgggccgatcgcctttgattcgagatcgggagtcagtt |
4471978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 39338935 - 39338891
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
39338935 |
agtctggtgggccgatcgcttttgattcgagatcgggagtcagtt |
39338891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 14106594 - 14106555
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
14106594 |
agtctggtgggccgatcacttttgattcaagatcgggagt |
14106555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 15126480 - 15126441
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
15126480 |
agtctggtgggccgatcatttttgattcgagatcgggagt |
15126441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 23650384 - 23650435
Alignment:
| Q |
28 |
atttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||| |||| ||||||||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
23650384 |
atttggttctagagtctggtgggctgatcgcttttgattcgagatcgggagt |
23650435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 27739986 - 27740025
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
27739986 |
agtctggtgggccgatcgcttttgattcaagatcgagagt |
27740025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 34143140 - 34143089
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||| ||| |||||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
34143140 |
tagtgatttttttttggagtctggtgagccgatcacttttgcttctagatcg |
34143089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 10173648 - 10173614
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10173648 |
agtctagtgggccgatcacttttgattcgagatcg |
10173614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 9560854 - 9560813
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagatcgagagttagttt |
85 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
9560854 |
tggtggaccgatcacttttgattcgagatcgggagctagttt |
9560813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 36276255 - 36276202
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| || ||||||||||||||| | || ||||||||||||||||| |||| |
|
|
| T |
36276255 |
tgatttggttatggagtctggtgggctgttcgcttttgattcgagatcgggagt |
36276202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 17105408 - 17105460
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcac-ttttgattcgagatcgaga |
77 |
Q |
| |
|
||||||| | ||| |||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
17105408 |
tgatttggtactgaagtctgatgggccgatcactttttgattcgagatcgaga |
17105460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 33788702 - 33788670
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
33788702 |
agtctggtgggccgatcgcttttgattcgagat |
33788670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 29)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 15840995 - 15840934
Alignment:
| Q |
27 |
gatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||| |||| |||||||| |
|
|
| T |
15840995 |
gatttgtttctagagtctggtgggctgatcacttttgattcgagatcgggagtcagtttctt |
15840934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 46692889 - 46692845
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
46692889 |
agtctggtgggccgatcacttttgattcgagatcgggagttagtt |
46692845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 30655565 - 30655619
Alignment:
| Q |
34 |
ttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
30655565 |
ttctggagtctagtgggccgatcgcttttgattcgagatcgggagtcagtttctt |
30655619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 7857650 - 7857703
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7857650 |
tgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagt |
7857703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 27031924 - 27031871
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
27031924 |
tgatttggttctaaagtctagtgggccgatcacttttgattcgagatcgagagt |
27031871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 41403085 - 41403020
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| ||||||||||| ||| ||| |||||||| |
|
|
| T |
41403085 |
tagtgatttgtttctagagtctggtgagccgatcacatttgattcgaggacgaaagtcagtttctt |
41403020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 46814551 - 46814498
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
46814551 |
tgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagt |
46814498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 19598647 - 19598691
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
19598647 |
agtctggtgggccgatcgcttttgattcgagatcgagagtcagtt |
19598691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 31585830 - 31585786
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
31585830 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
31585786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 41920463 - 41920507
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
41920463 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
41920507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 5459172 - 5459211
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5459172 |
agtctggtgggccgatcacttttgattcgagatcgggagt |
5459211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 33034719 - 33034668
Alignment:
| Q |
37 |
tggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
33034719 |
tggagtctggtgggtcgatcacttctgattcgagatcgaaagtcagtttctt |
33034668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 22200005 - 22200058
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
22200005 |
tgatttgactctggagtctgatggaccgatcacttttgattcaagatcgagagt |
22200058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 24658926 - 24658979
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
24658926 |
tgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagt |
24658979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 32876713 - 32876648
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||| |||||| ||||||| ||| |||||||||||||||||| |||| | |||||| |
|
|
| T |
32876713 |
tagtgatttgtttatggagtatggtgggtcgacgacttttgattcgagatcgggagtcactttctt |
32876648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 17033597 - 17033641
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||| |||| |
|
|
| T |
17033597 |
agtctggtgggccgatcacttttgaatcgagatcgggagtcagtt |
17033641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 38544808 - 38544764
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
38544808 |
agtctggtgggccgatcgcttttgattcgagatcgggagtcagtt |
38544764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 4651791 - 4651830
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
4651791 |
agtctggggggccgatcacttttgattcgagatcgggagt |
4651830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 38564881 - 38564960
Alignment:
| Q |
9 |
agttgaggggcgtctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
|||||||||| | || |||||||| | ||||||| ||||||||||| ||||||||||||||||| ||| | ||||||| |
|
|
| T |
38564881 |
agttgaggggtgccttttgatttgtgttaggagtctcgtgggccgatcgcttttgattcgagatcgggagctggtttctt |
38564960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 6583286 - 6583252
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |
|
|
| T |
6583286 |
agtctggtggaccgatcacttttgattcgagatcg |
6583252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 24684548 - 24684514
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24684548 |
agtctggtgggccgatcacttttaattcgagatcg |
24684514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 27905423 - 27905456
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
27905423 |
agtctggtggaccgatcacttttgattcgagatc |
27905456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 5389483 - 5389447
Alignment:
| Q |
48 |
gggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
5389483 |
gggccgatcacttttgattcgagatcgggagtcagtt |
5389447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 9081589 - 9081541
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
9081589 |
tgatttgcttctggagtcacgtggatcgatcacttttgattcgagatcg |
9081541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 9313359 - 9313315
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||| |||| |||| |
|
|
| T |
9313359 |
agtctagtgggctgatcacttttgattcgagatcgggagtcagtt |
9313315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 27102210 - 27102246
Alignment:
| Q |
48 |
gggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
27102210 |
gggccgatcacttttgattcgagatcgggagtcagtt |
27102246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 28887773 - 28887817
Alignment:
| Q |
29 |
tttgtttctggagtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
||||| || ||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
28887773 |
tttgtgtcgggagtctggtgggccgaccactcttgattcgagatc |
28887817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 30685974 - 30685930
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||| |||| |||| |
|
|
| T |
30685974 |
agtcttgtgggccgatcacttttgatttgagatcgggagtcagtt |
30685930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 46603403 - 46603447
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||| |||| |
|
|
| T |
46603403 |
agtctggtgggccattcgcttttgattcgagatcgagagtcagtt |
46603447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0620 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0620
Description:
Target: scaffold0620; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 3825 - 3889
Alignment:
| Q |
24 |
agtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||| |||||||||||||||| |||| |||||||| |
|
|
| T |
3825 |
agtgatttgtttttagagtctggtgggccgatcaattttgattcgagatcgggagtcagtttctt |
3889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0620; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8126 - 8172
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
|||||||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8126 |
tgatttgtctttggagtctggtgagccgatcacttttgattcgagat |
8172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 46262191 - 46262141
Alignment:
| Q |
38 |
ggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
46262191 |
ggagtctggtgggccgatcacttttgattcgagatcgggagctagtttctt |
46262141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 27993620 - 27993561
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagttt |
85 |
Q |
| |
|
|||||||| || |||||||||||| |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
27993620 |
tgatttgtgtcgggagtctggtggaccgatcacttttgattcgagatcgggagctagttt |
27993561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 6584906 - 6584959
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6584906 |
tgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagt |
6584959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 25153217 - 25153266
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcga |
75 |
Q |
| |
|
|||||||| || |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
25153217 |
tgatttgtgtcgggagtctggtggaccgatcacttttgattcgagatcga |
25153266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 38485561 - 38485606
Alignment:
| Q |
34 |
ttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38485561 |
ttctgaagtctggtgggccgatcacttttgattcgagatcgggagt |
38485606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 3478367 - 3478407
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3478367 |
tggtgggccgatcacttttgattcgagatcgggagttagtt |
3478407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 13311850 - 13311894
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
13311850 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
13311894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 9349760 - 9349799
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9349760 |
agtctggtgggccgatcacttttgattcgagatcgggagt |
9349799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 34389973 - 34390012
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34389973 |
agtctggtgggccgatcacttttgattcgagatcgggagt |
34390012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 35206765 - 35206718
Alignment:
| Q |
38 |
ggagtctggtgggccgatcacttttgattcgagatcgagagttagttt |
85 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||| |||||| |
|
|
| T |
35206765 |
ggagtctggtgggccgatcacttttgatccgagatcgggagctagttt |
35206718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10244195 - 10244237
Alignment:
| Q |
42 |
tctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
10244195 |
tctggtgggccgatcacttttgattcgagatcgggagtcagtt |
10244237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 17802885 - 17802852
Alignment:
| Q |
41 |
gtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
17802885 |
gtctggtgggccgatcacttttgattcgagatcg |
17802852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 6716806 - 6716762
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| |||| |
|
|
| T |
6716806 |
agtctggttggccgatcacttttgattcgagatcgggagtcagtt |
6716762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 8745166 - 8745198
Alignment:
| Q |
42 |
tctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
8745166 |
tctggtgggccgatcacttttgattcgagatcg |
8745198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 38306272 - 38306304
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
38306272 |
agtctggtgggccgatcacttttgattcgagat |
38306304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 42533322 - 42533283
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
42533322 |
agtctggtgggctgatcacttttgattcgagatcgggagt |
42533283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 2613951 - 2613894
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagt |
83 |
Q |
| |
|
||||||| |||||| |||||| |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
2613951 |
tgatttgagtctggaatctggttggccaatcacttttgattcgagatcggaagttagt |
2613894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 9428175 - 9428142
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
9428175 |
agtctggtgagccgatcacttttgattcgagatc |
9428142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 12480901 - 12480941
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
12480901 |
tggtgggccgatcgcttttgattcgagatcgggagtcagtt |
12480941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 33435120 - 33435164
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| |||| |||| |
|
|
| T |
33435120 |
agtctggtgagacgatcacttttgattcgagatcgggagtcagtt |
33435164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 41089818 - 41089786
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
41089818 |
agtctggtggaccgatcacttttgattcgagat |
41089786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 30127254 - 30127386
Alignment:
| Q |
21 |
tctagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt-tcttatctcaagctgttttggcgtgtttttgtgtc |
119 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||| |||| |||| |||||| | ||| ||| |||||| || || |
|
|
| T |
30127254 |
tctattgatttgtttcgggagtctggtgagccgatcgcttttgattcgagatcgggagtcagttctcttgactcaagttttttaggcttgttttggtctc |
30127353 |
T |
 |
| Q |
120 |
ttcttctacagactgaggattgatcggtggtgg |
152 |
Q |
| |
|
|||| | ||| ||| || ||||| |||||||| |
|
|
| T |
30127354 |
ttctccaacaaacttggggttgattggtggtgg |
30127386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 34475836 - 34475785
Alignment:
| Q |
28 |
atttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34475836 |
atttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagt |
34475785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 12220793 - 12220851
Alignment:
| Q |
157 |
tgaattggttcagaatttcgactaagttggggtgatgaggtgaggtgttgtctgtggtg |
215 |
Q |
| |
|
||||||||||| || ||||| |||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12220793 |
tgaattggttcggagtttcggctaagttgtggtgatgaggtgaggtgttgtttgtggtg |
12220851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 19295942 - 19295853
Alignment:
| Q |
33 |
tttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgttttggcgtgtttttgtgtcttct |
123 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| |||| |||||||||||| |||||| | ||| ||| |||||| ||||||||| |
|
|
| T |
19295942 |
tttcttgagtctggtgggcctatcacttttgattcgatatcggaagttagtttcttgactcaag-tttttgggcttgttttggtgtcttct |
19295853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 20710778 - 20710733
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagttt |
85 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
20710778 |
agtctggtgggccgatcacttttgattcgagatcgggagctagttt |
20710733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 7424884 - 7424820
Alignment:
| Q |
151 |
ggaagttgaattggttcagaatttcgactaagttggggtgatgaggtgaggtgttgtctgtggtg |
215 |
Q |
| |
|
||||| ||| ||||||| |||||||| |||||||| |||||||| |||||||||||| ||||||| |
|
|
| T |
7424884 |
ggaagctgatttggttcggaatttcggctaagttgtggtgatgatgtgaggtgttgtttgtggtg |
7424820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 17550968 - 17551012
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
17550968 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
17551012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 19176513 - 19176557
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
19176513 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
19176557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 24099411 - 24099363
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24099411 |
tgatttgtttatagagtctggtgggccgatcacttttgattcgatatcg |
24099363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 14879446 - 14879485
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14879446 |
agtctggtgggccgatcacttttgattcgagatcgggagt |
14879485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 45398807 - 45398846
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
45398807 |
agtctggtggaccgatcacttttgattcgagatcgagagt |
45398846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 823498 - 823461
Alignment:
| Q |
47 |
tgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
823498 |
tgggccgatcacttttgattcgagatcgagagtcagtt |
823461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 14755335 - 14755291
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||| |||| |
|
|
| T |
14755335 |
agtctggtgggccgatcacttttgattcaagatcgggagtcagtt |
14755291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 23328434 - 23328378
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttag |
82 |
Q |
| |
|
||||||| |||| ||| |||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
23328434 |
tgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgggagttag |
23328378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 24712635 - 24712683
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||| ||||||||||| |
|
|
| T |
24712635 |
tgatttgtttctggagtatggtgggccggtcattttttattcgagatcg |
24712683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 43012386 - 43012430
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||| |||| |
|
|
| T |
43012386 |
agtctggtggcccgatcacttttgattcgagatcgggagtcagtt |
43012430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 47945717 - 47945761
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
47945717 |
agtccggtgggccgatcacttttgattcgagatcgggagtcagtt |
47945761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 40023642 - 40023603
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
40023642 |
agtctggtggaccgatcacttttgattcgagatcgggagt |
40023603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 1652950 - 1652912
Alignment:
| Q |
46 |
gtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
1652950 |
gtgggccgatcacttttgattcgagatcaggagttagtt |
1652912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 51065944 - 51065886
Alignment:
| Q |
9 |
agttgaggggcgtct-agtgatttgtttctggagtctggtgggccgatcacttttgatt |
66 |
Q |
| |
|
||||||||||| ||| |||||||||||| |||||||||||| |||||| ||||||||| |
|
|
| T |
51065944 |
agttgaggggcttcttagtgatttgttttgggagtctggtggaccgatcgcttttgatt |
51065886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 24992002 - 24991953
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
||||||||||||| |||| | ||||||||||| | ||||||||||||||| |
|
|
| T |
24992002 |
tagtgatttgtttttggattatggtgggccgaccgcttttgattcgagat |
24991953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 5556581 - 5556625
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||| |||| |||| |
|
|
| T |
5556581 |
agtctggtggggcgatcgcttttgattcgagatcgggagtcagtt |
5556625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 9584123 - 9584079
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||| |||| |
|
|
| T |
9584123 |
agtctggtggatcgatcacttttgattcgagatcgggagtcagtt |
9584079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 33144019 - 33143975
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||| |||| |
|
|
| T |
33144019 |
agtctggtggatcgatcacttttgattcgagatcgggagtcagtt |
33143975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 72
Target Start/End: Original strand, 37123397 - 37123425
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
37123397 |
tggtgggccgatcacttttgattcgagat |
37123425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 39021342 - 39021302
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||| |||| |
|
|
| T |
39021342 |
tggtgggccgatcacttttgattcgaggtcgggagtcagtt |
39021302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0236 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0236
Description:
Target: scaffold0236; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 10452 - 10358
Alignment:
| Q |
59 |
ttttgattcgagatcgagagttagtttcttatctcaagctgttttggcgtgtttttgtgtcttcttctacagactgaggattgatcggtggtggaa |
154 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||| || |||||| |||||| ||||||||| ||| || |||||||||| |||||||||| |
|
|
| T |
10452 |
ttttgattcgagatcgagagtcagtttcttgactcaagttg-tttggcttgttttggtgtcttctctaacaaaccgaggattgattggtggtggaa |
10358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 35062454 - 35062512
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
35062454 |
tgatttggttctgaagtctggtgggccgatcgattttgattcgagatcgagagtcagtt |
35062512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 24995465 - 24995421
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
24995465 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
24995421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 31207432 - 31207388
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
31207432 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
31207388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 34389075 - 34389031
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
34389075 |
agtctggtgggccgatcacttttgattcgagatcaagagtcagtt |
34389031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 33967335 - 33967370
Alignment:
| Q |
38 |
ggagtctggtgggccgatcacttttgattcgagatc |
73 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
33967335 |
ggagtctggtgggccgatcacttttgattcgagatc |
33967370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 10552265 - 10552323
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||||||||| |||||| |||| |||| |
|
|
| T |
10552265 |
tgatttggttctgaagtctggtgggccgatcgcttttgattctagatcgggagtcagtt |
10552323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 15821463 - 15821410
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| |||| |||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
15821463 |
tgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagt |
15821410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 40531243 - 40531288
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagttt |
85 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
40531243 |
agtctgatgggccgatcacttttgattcgagatcgggagctagttt |
40531288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 544434 - 544386
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||| || ||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
544434 |
tgatttgtgtcgggagtctggtgggtcgatcactttagattcgagatcg |
544386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 15906697 - 15906741
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||| |||| |
|
|
| T |
15906697 |
agtctggtgggccgatcacatttgattcgagatcgggagtcagtt |
15906741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 16055285 - 16055238
Alignment:
| Q |
25 |
gtgatttgtttctggagtctggtgggccgatcacttttgattcgagat |
72 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
16055285 |
gtgatttttttctagagtctggtgggccgataaattttgattcgagat |
16055238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 32066365 - 32066326
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
32066365 |
agtctggtgggccgatcacttttgattcgaaatcgggagt |
32066326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 41893470 - 41893407
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtttcttatctcaagctgtttt |
103 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| |||| |||| || ||||||| |||||| |
|
|
| T |
41893470 |
agtctggtgggccaaccacttttgattcgagatcgggagtcagttctttgtctcaagttgtttt |
41893407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 30236212 - 30236154
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| || || ||||||||||| ||||| ||||||||||||||||| |||| |||| |
|
|
| T |
30236212 |
tgatttggttttgaagtctggtgggacgatcgcttttgattcgagatcgggagtcagtt |
30236154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 36630848 - 36630882
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36630848 |
agtctggtgggccgatcacttttaattcgagatcg |
36630882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 32945787 - 32945734
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||| ||||| ||| | |||||| |||||||||||||||||||||| |||| |
|
|
| T |
32945787 |
tgatttgattctgaagtatagtgggctgatcacttttgattcgagatcgggagt |
32945734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 5221922 - 5221866
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttag |
82 |
Q |
| |
|
||||||| || ||||| |||||||||||||| |||||||||||| ||| ||||||| |
|
|
| T |
5221922 |
tgatttggttttggaggctggtgggccgatcgcttttgattcgaaatcaggagttag |
5221866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 9519510 - 9519554
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||| |||| |||| |
|
|
| T |
9519510 |
agtctagtgggccgatcagttttgattcgagatcgggagtcagtt |
9519554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 17657068 - 17657028
Alignment:
| Q |
44 |
tggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||| |||| |
|
|
| T |
17657068 |
tggtgggtcgatcacttttgattcgagatcgggagtcagtt |
17657028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 17720905 - 17720861
Alignment:
| Q |
36 |
ctggagtctggtgggccgatcacttttgattcgagatcgagagtt |
80 |
Q |
| |
|
||||| |||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
17720905 |
ctggattctggtgggccgattacttttgctttgagatcgagagtt |
17720861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 37986928 - 37986884
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||| |||| |||| |
|
|
| T |
37986928 |
agtctggtgggccaatcatttttgattcgagatcgggagtcagtt |
37986884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 6342 - 6277
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| ||||||||||| ||| ||| |||||||| |
|
|
| T |
6342 |
tagtgatttgtttctagagtctggtgagccgatcacatttgattcgaggacgaaagtcagtttctt |
6277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 31250 - 31315
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| ||||||||||| ||| ||| |||||||| |
|
|
| T |
31250 |
tagtgatttgtttctagagtctggtgagccgatcacatttgattcgaggacgaaagtcagtttctt |
31315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 25341707 - 25341751
Alignment:
| Q |
38 |
ggagtctggtgggccgatcacttttgattcgagatcgagagttag |
82 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
25341707 |
ggagtctggtgggccgatcacttttgatttgagattgagagttag |
25341751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 33258952 - 33258908
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33258952 |
agtctggtgggccgatcacttttgattcgagatcaggagttagtt |
33258908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 34378109 - 34378153
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
34378109 |
agtctggtgggccgatcacttttgattcgagatcgggagtcagtt |
34378153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 12046249 - 12046300
Alignment:
| Q |
23 |
tagtgatttgtttctggagtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||||| ||| | ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12046249 |
tagtgatttgattcggaagtttggtgggccgatcacttttgattcgagatcg |
12046300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 13954304 - 13954265
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13954304 |
agtctggtgggccgatcacttttgattcgagatcgggagt |
13954265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 28765686 - 28765624
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttctt |
88 |
Q |
| |
|
|||||| ||||| || |||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
28765686 |
tgatttttttctagattctggtggattgatcacttttgattcgagatcgagagtcagtttctt |
28765624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 39184256 - 39184223
Alignment:
| Q |
41 |
gtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
39184256 |
gtctggtgggccgatcacttttgattcgagatcg |
39184223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 7195309 - 7195265
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||| |||| |
|
|
| T |
7195309 |
agtctggtgagccgatcacttttgattcgagatcgggagtcagtt |
7195265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 7392101 - 7392057
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||| |||| |
|
|
| T |
7392101 |
agtctggtggaccgatcacttttgattcgagatcgggagtcagtt |
7392057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 25992018 - 25992062
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||| |||| |
|
|
| T |
25992018 |
agtctggtgggccaatcgcttttgattcgagatcgagagtcagtt |
25992062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 18557534 - 18557592
Alignment:
| Q |
26 |
tgatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagttt |
85 |
Q |
| |
|
|||||||| || ||||||| ||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
18557534 |
tgatttgtgtcgggagtcta-tgggccgatcacttttgattcgagatccagagctagttt |
18557592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 26046034 - 26045991
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagt |
83 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
26046034 |
agtctggtgaaccgatcacttttgattcgagatcgggagttagt |
26045991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 18593260 - 18593298
Alignment:
| Q |
46 |
gtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
18593260 |
gtgggcagatcacttttgattcgagatcgggagttagtt |
18593298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0200 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0200
Description:
Target: scaffold0200; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 19394 - 19428
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
19394 |
agtctggtgggccgatcacttttgattcgagatcg |
19428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 42208 - 42174
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcg |
74 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
42208 |
agtctggtgggccgatcacttttgattcgagatcg |
42174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1613 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1613
Description:
Target: scaffold1613; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 1087 - 1043
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
1087 |
agtctggtgggccgatcgcttttgattcgagatcgggagtcagtt |
1043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 35841 - 35802
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagt |
79 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
35841 |
agtctagtgggccgatcacttttgattcgagatcgggagt |
35802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 30659 - 30599
Alignment:
| Q |
27 |
gatttgtttctggagtctggtgggccgatcacttttgattcgagatcgagagttagtttct |
87 |
Q |
| |
|
||||||||| |||||||| ||| ||| |||| ||||| |||||||| | |||||||||||| |
|
|
| T |
30659 |
gatttgtttatggagtctagtgtgccaatcaattttgcttcgagattgggagttagtttct |
30599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 36718 - 36762
Alignment:
| Q |
40 |
agtctggtgggccgatcacttttgattcgagatcgagagttagtt |
84 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||| |||| |||| |
|
|
| T |
36718 |
agtctggcgggctgatcacttttgattcgagatcgggagtcagtt |
36762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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