View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1306_low_6 (Length: 578)

Name: NF1306_low_6
Description: NF1306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1306_low_6
NF1306_low_6
[»] chr4 (75 HSPs)
chr4 (13-219)||(47867824-47868030)
chr4 (13-219)||(2229192-2229398)
chr4 (13-219)||(20281538-20281742)
chr4 (13-219)||(14332704-14332911)
chr4 (13-219)||(26916270-26916476)
chr4 (62-219)||(4058709-4058866)
chr4 (62-219)||(29203500-29203657)
chr4 (13-215)||(56318075-56318278)
chr4 (62-219)||(20716174-20716331)
chr4 (62-219)||(39078151-39078307)
chr4 (13-219)||(41414612-41414816)
chr4 (62-219)||(55580663-55580821)
chr4 (84-219)||(7654633-7654768)
chr4 (62-219)||(10069691-10069848)
chr4 (13-219)||(28669002-28669207)
chr4 (84-219)||(16604847-16604982)
chr4 (68-219)||(24940365-24940516)
chr4 (62-219)||(17794542-17794699)
chr4 (62-219)||(35310743-35310900)
chr4 (62-219)||(5483279-5483436)
chr4 (62-219)||(42915523-42915681)
chr4 (62-219)||(48793631-48793784)
chr4 (62-219)||(8683307-8683462)
chr4 (62-215)||(1585354-1585505)
chr4 (62-156)||(35529666-35529760)
chr4 (73-197)||(5815474-5815598)
chr4 (62-219)||(52535598-52535743)
chr4 (62-219)||(50080457-50080609)
chr4 (74-219)||(32203226-32203364)
chr4 (72-189)||(46070553-46070668)
chr4 (148-219)||(16473828-16473899)
chr4 (72-195)||(47516216-47516339)
chr4 (63-198)||(50145731-50145865)
chr4 (72-194)||(5841805-5841927)
chr4 (72-194)||(8178265-8178387)
chr4 (73-219)||(19351851-19352003)
chr4 (62-204)||(32323278-32323419)
chr4 (126-219)||(21722683-21722776)
chr4 (62-203)||(25297235-25297380)
chr4 (72-219)||(5064656-5064803)
chr4 (62-219)||(12002634-12002793)
chr4 (65-194)||(17186822-17186940)
chr4 (62-208)||(31280193-31280329)
chr4 (62-219)||(14583723-14583880)
chr4 (77-219)||(17799135-17799277)
chr4 (72-166)||(23978169-23978263)
chr4 (112-214)||(32280009-32280111)
chr4 (71-196)||(30011951-30012074)
chr4 (72-194)||(37911888-37912010)
chr4 (72-190)||(49080261-49080379)
chr4 (133-194)||(29511490-29511551)
chr4 (72-192)||(32410332-32410452)
chr4 (73-219)||(40553774-40553924)
chr4 (72-219)||(8013090-8013237)
chr4 (72-194)||(28318445-28318565)
chr4 (72-190)||(28142652-28142769)
chr4 (71-196)||(29180409-29180534)
chr4 (13-51)||(7654572-7654610)
chr4 (71-196)||(10591500-10591625)
chr4 (71-196)||(30776481-30776606)
chr4 (71-196)||(39969986-39970111)
chr4 (71-196)||(47807193-47807318)
chr4 (71-196)||(53677476-53677601)
chr4 (71-195)||(50768443-50768567)
chr4 (72-194)||(53848471-53848586)
chr4 (71-166)||(40411104-40411199)
chr4 (62-103)||(32280104-32280145)
chr4 (71-196)||(37788449-37788574)
chr4 (132-196)||(29899774-29899838)
chr4 (180-219)||(7438760-7438799)
chr4 (112-215)||(25268523-25268626)
chr4 (13-43)||(29203421-29203451)
chr4 (62-103)||(21722783-21722824)
chr4 (13-41)||(4058628-4058656)
chr4 (13-41)||(17186992-17187020)
[»] chr7 (70 HSPs)
chr7 (13-219)||(14805817-14806022)
chr7 (13-219)||(15252811-15253016)
chr7 (13-219)||(25737634-25737840)
chr7 (13-219)||(19912776-19912982)
chr7 (61-219)||(45485950-45486108)
chr7 (61-219)||(46760264-46760422)
chr7 (13-219)||(18102476-18102683)
chr7 (13-219)||(35923199-35923404)
chr7 (62-215)||(20123691-20123844)
chr7 (62-219)||(25944572-25944729)
chr7 (62-219)||(6191041-6191198)
chr7 (62-219)||(4910642-4910797)
chr7 (62-219)||(47779600-47779757)
chr7 (62-219)||(22632085-22632242)
chr7 (62-203)||(47557622-47557765)
chr7 (100-215)||(12632355-12632470)
chr7 (62-219)||(14574560-14574717)
chr7 (62-219)||(44682874-44683030)
chr7 (62-219)||(11780014-11780170)
chr7 (62-208)||(2610586-2610732)
chr7 (62-219)||(15995715-15995873)
chr7 (62-171)||(9158086-9158194)
chr7 (62-215)||(16917468-16917620)
chr7 (68-219)||(48413723-48413866)
chr7 (87-193)||(31549936-31550042)
chr7 (62-202)||(35068872-35068999)
chr7 (72-194)||(39170540-39170662)
chr7 (13-103)||(12633110-12633200)
chr7 (73-168)||(24151640-24151734)
chr7 (72-195)||(38260322-38260445)
chr7 (63-157)||(27810804-27810898)
chr7 (72-194)||(31768994-31769116)
chr7 (61-220)||(4237720-4237880)
chr7 (72-219)||(35887976-35888123)
chr7 (106-171)||(4069043-4069108)
chr7 (84-167)||(8015732-8015813)
chr7 (71-190)||(21654116-21654235)
chr7 (73-219)||(37767026-37767172)
chr7 (73-202)||(29713196-29713325)
chr7 (71-219)||(33153039-33153187)
chr7 (71-196)||(48879388-48879513)
chr7 (71-219)||(35084067-35084215)
chr7 (71-196)||(35181192-35181317)
chr7 (71-196)||(43107894-43108019)
chr7 (62-219)||(19492400-19492559)
chr7 (71-219)||(40560382-40560530)
chr7 (132-194)||(10248594-10248657)
chr7 (72-194)||(3777984-3778106)
chr7 (71-196)||(41815682-41815807)
chr7 (71-196)||(48937878-48938003)
chr7 (63-110)||(4068972-4069020)
chr7 (73-153)||(22369233-22369313)
chr7 (13-49)||(45485900-45485936)
chr7 (71-190)||(19933050-19933169)
chr7 (71-190)||(19964189-19964308)
chr7 (73-195)||(33092669-33092792)
chr7 (61-95)||(16562744-16562778)
chr7 (61-95)||(16602884-16602918)
chr7 (13-43)||(25944492-25944522)
chr7 (13-51)||(39174197-39174235)
chr7 (13-51)||(47557922-47557960)
chr7 (71-196)||(3157436-3157561)
chr7 (71-196)||(18206308-18206433)
chr7 (71-196)||(29236057-29236181)
chr7 (71-156)||(30082353-30082438)
chr7 (71-124)||(41890303-41890356)
chr7 (132-196)||(9818529-9818593)
chr7 (132-196)||(10720454-10720518)
chr7 (13-49)||(16562695-16562731)
chr7 (13-49)||(16602931-16602967)
[»] chr6 (25 HSPs)
chr6 (13-219)||(21542365-21542571)
chr6 (13-219)||(35129062-35129269)
chr6 (61-219)||(11082253-11082411)
chr6 (13-215)||(34177653-34177855)
chr6 (13-219)||(3095728-3095935)
chr6 (62-219)||(7274883-7275040)
chr6 (62-219)||(30794200-30794357)
chr6 (62-219)||(12461437-12461594)
chr6 (62-215)||(17751756-17751909)
chr6 (62-196)||(31107187-31107320)
chr6 (72-194)||(4031991-4032113)
chr6 (72-194)||(4987947-4988069)
chr6 (72-194)||(16524384-16524505)
chr6 (62-140)||(9428766-9428844)
chr6 (76-194)||(16013465-16013583)
chr6 (72-194)||(3888431-3888553)
chr6 (71-196)||(17598294-17598419)
chr6 (62-219)||(14573136-14573293)
chr6 (126-168)||(5300659-5300701)
chr6 (138-219)||(5822042-5822123)
chr6 (107-219)||(5881760-5881872)
chr6 (71-195)||(21963958-21964082)
chr6 (178-219)||(9428857-9428898)
chr6 (73-191)||(16870828-16870947)
chr6 (133-219)||(15830760-15830846)
[»] chr5 (72 HSPs)
chr5 (13-219)||(43589970-43590176)
chr5 (13-219)||(6686330-6686538)
chr5 (13-219)||(11261892-11262098)
chr5 (13-219)||(37522597-37522804)
chr5 (13-219)||(37562769-37562976)
chr5 (62-219)||(20644010-20644167)
chr5 (62-219)||(42273645-42273800)
chr5 (62-219)||(34425327-34425483)
chr5 (64-219)||(20039100-20039255)
chr5 (62-219)||(38130121-38130281)
chr5 (62-208)||(32110998-32111144)
chr5 (62-212)||(8225459-8225608)
chr5 (63-219)||(19413138-19413294)
chr5 (62-219)||(25840860-25841017)
chr5 (62-188)||(38280843-38280969)
chr5 (62-209)||(39505250-39505397)
chr5 (62-219)||(4463356-4463511)
chr5 (62-219)||(17351384-17351541)
chr5 (66-215)||(43454335-43454484)
chr5 (62-209)||(5984126-5984280)
chr5 (72-219)||(12912303-12912449)
chr5 (62-172)||(32017700-32017809)
chr5 (67-215)||(42104262-42104408)
chr5 (62-219)||(41625520-41625675)
chr5 (62-158)||(9957488-9957581)
chr5 (63-181)||(104260-104386)
chr5 (100-216)||(23233445-23233561)
chr5 (100-219)||(12792794-12792903)
chr5 (72-168)||(10153987-10154083)
chr5 (100-219)||(12729892-12730001)
chr5 (72-194)||(5369064-5369186)
chr5 (72-189)||(3463853-3463970)
chr5 (62-170)||(7071234-7071342)
chr5 (72-219)||(16153354-16153500)
chr5 (72-193)||(8959646-8959767)
chr5 (72-219)||(8506443-8506584)
chr5 (71-195)||(24439575-24439699)
chr5 (156-219)||(32019911-32019974)
chr5 (73-204)||(8146730-8146860)
chr5 (72-194)||(5736273-5736395)
chr5 (62-104)||(12730103-12730145)
chr5 (71-196)||(12638892-12639017)
chr5 (71-196)||(31690651-31690776)
chr5 (112-219)||(30893258-30893365)
chr5 (132-194)||(1144524-1144586)
chr5 (73-219)||(32079512-32079657)
chr5 (73-194)||(6391876-6391997)
chr5 (170-219)||(9957443-9957491)
chr5 (62-99)||(12792929-12792966)
chr5 (71-196)||(13146732-13146857)
chr5 (72-190)||(28907074-28907192)
chr5 (72-190)||(28943469-28943587)
chr5 (132-193)||(29307221-29307282)
chr5 (13-93)||(842698-842780)
chr5 (72-163)||(5659584-5659676)
chr5 (106-190)||(30703641-30703725)
chr5 (71-196)||(8146044-8146169)
chr5 (70-214)||(29493525-29493669)
chr5 (62-116)||(446000-446054)
chr5 (62-136)||(1238522-1238596)
chr5 (13-43)||(9957631-9957661)
chr5 (13-43)||(20643930-20643960)
chr5 (62-96)||(23233395-23233429)
chr5 (71-215)||(8143937-8144081)
chr5 (13-41)||(8225379-8225407)
chr5 (132-196)||(16286114-16286178)
chr5 (71-99)||(17825326-17825354)
chr5 (132-196)||(24432431-24432495)
chr5 (132-196)||(25962479-25962543)
chr5 (132-196)||(31316832-31316896)
chr5 (13-41)||(34425246-34425274)
chr5 (13-41)||(42273565-42273593)
[»] scaffold0300 (1 HSPs)
scaffold0300 (13-219)||(581-787)
[»] chr8 (71 HSPs)
chr8 (13-219)||(7022412-7022618)
chr8 (62-219)||(34890183-34890340)
chr8 (13-219)||(7858473-7858679)
chr8 (62-219)||(36190766-36190923)
chr8 (13-219)||(26483478-26483683)
chr8 (62-219)||(43216356-43216513)
chr8 (62-208)||(31734109-31734255)
chr8 (62-214)||(28348605-28348756)
chr8 (62-219)||(24892832-24892992)
chr8 (62-219)||(15957920-15958079)
chr8 (62-203)||(8711870-8712011)
chr8 (13-219)||(41086395-41086602)
chr8 (62-208)||(13143758-13143904)
chr8 (62-215)||(34158303-34158457)
chr8 (62-215)||(35456038-35456190)
chr8 (62-215)||(8107630-8107783)
chr8 (76-219)||(30575843-30575987)
chr8 (84-219)||(35525603-35525736)
chr8 (62-219)||(8709795-8709950)
chr8 (62-219)||(29920277-29920434)
chr8 (100-219)||(13143954-13144073)
chr8 (62-219)||(15824646-15824797)
chr8 (62-219)||(16879401-16879558)
chr8 (62-209)||(4046912-4047060)
chr8 (62-157)||(7499720-7499816)
chr8 (67-159)||(3642039-3642130)
chr8 (62-171)||(2052830-2052937)
chr8 (99-215)||(16358125-16358240)
chr8 (72-219)||(17713227-17713374)
chr8 (72-194)||(8673385-8673507)
chr8 (72-179)||(26954441-26954548)
chr8 (72-219)||(41362316-41362463)
chr8 (72-194)||(2628198-2628320)
chr8 (72-190)||(25195085-25195202)
chr8 (64-219)||(44663801-44663953)
chr8 (72-219)||(8745587-8745734)
chr8 (72-194)||(17336746-17336868)
chr8 (62-183)||(41755920-41756041)
chr8 (74-219)||(38072169-38072314)
chr8 (72-189)||(4038920-4039037)
chr8 (73-193)||(5217397-5217517)
chr8 (134-204)||(4480841-4480911)
chr8 (121-219)||(8712577-8712675)
chr8 (113-194)||(28497172-28497253)
chr8 (72-168)||(27819663-27819759)
chr8 (62-168)||(33563571-33563681)
chr8 (71-187)||(39187237-39187353)
chr8 (152-219)||(2052947-2053014)
chr8 (62-104)||(13144085-13144127)
chr8 (71-196)||(3099957-3100082)
chr8 (72-167)||(14576213-14576301)
chr8 (75-188)||(24510735-24510848)
chr8 (71-196)||(31133061-31133186)
chr8 (71-196)||(34713532-34713657)
chr8 (71-196)||(44052625-44052750)
chr8 (77-141)||(7670749-7670813)
chr8 (71-196)||(25321618-25321743)
chr8 (71-219)||(34899928-34900076)
chr8 (72-219)||(17314834-17314981)
chr8 (132-219)||(40773412-40773499)
chr8 (184-219)||(45190700-45190735)
chr8 (133-183)||(14693434-14693484)
chr8 (13-43)||(34890390-34890420)
chr8 (86-147)||(374103-374162)
chr8 (127-204)||(6401679-6401756)
chr8 (182-219)||(11158675-11158712)
chr8 (71-196)||(27752590-27752715)
chr8 (13-41)||(13144179-13144207)
chr8 (13-41)||(24892752-24892780)
chr8 (72-168)||(29147297-29147393)
chr8 (134-190)||(33851061-33851117)
[»] chr2 (57 HSPs)
chr2 (13-219)||(28599155-28599362)
chr2 (13-219)||(35517069-35517276)
chr2 (13-219)||(6110206-6110414)
chr2 (13-215)||(45085204-45085406)
chr2 (13-214)||(41528203-41528404)
chr2 (62-219)||(3201322-3201479)
chr2 (62-219)||(19264095-19264253)
chr2 (62-219)||(45660361-45660521)
chr2 (62-215)||(11617020-11617173)
chr2 (62-219)||(33198638-33198795)
chr2 (62-219)||(28858305-28858465)
chr2 (62-219)||(29524048-29524205)
chr2 (62-208)||(14873958-14874105)
chr2 (62-219)||(12938238-12938395)
chr2 (62-219)||(25572042-25572198)
chr2 (369-484)||(23690274-23690388)
chr2 (65-219)||(8701601-8701755)
chr2 (62-219)||(24204536-24204693)
chr2 (62-219)||(9864725-9864881)
chr2 (62-215)||(6765944-6766098)
chr2 (268-368)||(23690582-23690683)
chr2 (62-188)||(40584436-40584562)
chr2 (62-219)||(5963197-5963353)
chr2 (62-219)||(33677479-33677636)
chr2 (62-219)||(7645234-7645394)
chr2 (66-219)||(35022897-35023051)
chr2 (87-218)||(35115811-35115943)
chr2 (62-219)||(44454987-44455142)
chr2 (90-219)||(40808727-40808853)
chr2 (62-215)||(30830607-30830760)
chr2 (133-219)||(43415468-43415554)
chr2 (72-194)||(26998323-26998445)
chr2 (72-195)||(32010108-32010231)
chr2 (72-194)||(32273677-32273799)
chr2 (62-171)||(30421237-30421346)
chr2 (64-203)||(4707419-4707558)
chr2 (79-194)||(9709526-9709641)
chr2 (72-194)||(38071002-38071123)
chr2 (62-148)||(39696877-39696963)
chr2 (72-190)||(4891675-4891793)
chr2 (91-141)||(5280592-5280642)
chr2 (72-194)||(20380129-20380251)
chr2 (72-168)||(8032726-8032823)
chr2 (162-219)||(5280537-5280595)
chr2 (71-196)||(18833940-18834065)
chr2 (72-194)||(11030962-11031077)
chr2 (72-219)||(44442137-44442285)
chr2 (71-196)||(792386-792511)
chr2 (133-178)||(16494974-16495019)
chr2 (112-219)||(32428019-32428127)
chr2 (71-196)||(14565403-14565528)
chr2 (71-196)||(21539758-21539883)
chr2 (143-219)||(11825366-11825438)
chr2 (13-43)||(19264015-19264045)
chr2 (72-219)||(33932930-33933073)
chr2 (71-196)||(44803899-44804024)
chr2 (13-45)||(3201282-3201314)
[»] chr1 (94 HSPs)
chr1 (13-219)||(32624013-32624220)
chr1 (13-219)||(24190418-24190622)
chr1 (13-215)||(39555598-39555800)
chr1 (13-209)||(12448985-12449181)
chr1 (64-219)||(2126036-2126191)
chr1 (62-219)||(15959648-15959805)
chr1 (61-219)||(35691387-35691546)
chr1 (62-219)||(6785452-6785608)
chr1 (62-219)||(6786834-6786991)
chr1 (62-219)||(33369549-33369703)
chr1 (62-219)||(40718674-40718831)
chr1 (13-219)||(32983180-32983384)
chr1 (62-219)||(42965824-42965979)
chr1 (62-219)||(45226134-45226291)
chr1 (13-211)||(43667319-43667514)
chr1 (62-219)||(28016754-28016909)
chr1 (13-219)||(28120763-28120968)
chr1 (62-219)||(7467970-7468128)
chr1 (62-219)||(47014501-47014655)
chr1 (62-219)||(39932580-39932737)
chr1 (62-219)||(1820411-1820568)
chr1 (62-219)||(46542980-46543135)
chr1 (70-215)||(13136566-13136708)
chr1 (62-215)||(3076291-3076444)
chr1 (62-215)||(3875031-3875186)
chr1 (112-215)||(11241073-11241176)
chr1 (62-219)||(24728634-24728792)
chr1 (62-215)||(47600048-47600204)
chr1 (62-214)||(46818515-46818667)
chr1 (62-219)||(44148844-44148997)
chr1 (62-215)||(2246026-2246179)
chr1 (62-215)||(37735395-37735548)
chr1 (62-219)||(33431557-33431712)
chr1 (62-219)||(3861703-3861858)
chr1 (63-187)||(10558796-10558920)
chr1 (65-176)||(16854139-16854250)
chr1 (62-182)||(23392211-23392330)
chr1 (87-219)||(32742210-32742342)
chr1 (62-209)||(43765290-43765438)
chr1 (112-219)||(52984979-52985086)
chr1 (62-167)||(6787050-6787154)
chr1 (62-176)||(50369954-50370071)
chr1 (62-209)||(25391680-25391824)
chr1 (62-219)||(47302916-47303071)
chr1 (72-194)||(5858404-5858526)
chr1 (72-194)||(5950445-5950567)
chr1 (72-194)||(7397712-7397834)
chr1 (78-215)||(7875952-7876091)
chr1 (62-215)||(1034854-1035004)
chr1 (72-194)||(16688142-16688264)
chr1 (112-215)||(30221771-30221874)
chr1 (72-219)||(45840074-45840220)
chr1 (84-219)||(298676-298812)
chr1 (72-194)||(37538815-37538937)
chr1 (100-215)||(32318571-32318687)
chr1 (62-215)||(50012587-50012727)
chr1 (72-195)||(8889729-8889845)
chr1 (72-190)||(25185341-25185459)
chr1 (72-194)||(44510252-44510374)
chr1 (159-219)||(4672924-4672984)
chr1 (80-146)||(14086966-14087030)
chr1 (88-219)||(30701393-30701524)
chr1 (72-219)||(35366211-35366358)
chr1 (73-219)||(52841453-52841599)
chr1 (72-165)||(41063747-41063840)
chr1 (74-154)||(47026655-47026736)
chr1 (72-168)||(15912204-15912300)
chr1 (72-171)||(13351686-13351785)
chr1 (132-219)||(50176588-50176675)
chr1 (70-196)||(28916549-28916675)
chr1 (71-196)||(23873861-23873986)
chr1 (62-118)||(50665259-50665315)
chr1 (72-151)||(34102049-34102127)
chr1 (72-190)||(16661521-16661639)
chr1 (71-196)||(25990749-25990874)
chr1 (71-196)||(38942475-38942600)
chr1 (71-196)||(40220057-40220182)
chr1 (73-157)||(42724101-42724185)
chr1 (71-195)||(46949322-46949446)
chr1 (62-100)||(11241039-11241077)
chr1 (112-186)||(51338938-51339012)
chr1 (112-186)||(51840536-51840610)
chr1 (72-145)||(39151242-39151315)
chr1 (71-196)||(43656071-43656196)
chr1 (72-116)||(43359696-43359740)
chr1 (138-194)||(46803704-46803760)
chr1 (71-196)||(35884212-35884337)
chr1 (13-45)||(2125984-2126016)
chr1 (143-219)||(2459881-2459957)
chr1 (13-41)||(6786753-6786781)
chr1 (13-41)||(6787208-6787236)
chr1 (13-41)||(7468170-7468198)
chr1 (13-41)||(28016961-28016989)
chr1 (71-151)||(44056377-44056457)
[»] chr3 (90 HSPs)
chr3 (13-219)||(37042384-37042590)
chr3 (13-219)||(11054278-11054481)
chr3 (13-219)||(23311560-23311766)
chr3 (62-219)||(14752175-14752332)
chr3 (61-215)||(30189569-30189724)
chr3 (13-219)||(36546493-36546699)
chr3 (13-219)||(36561616-36561822)
chr3 (62-219)||(28875406-28875563)
chr3 (62-219)||(50651004-50651161)
chr3 (62-219)||(35963152-35963309)
chr3 (62-208)||(6438083-6438229)
chr3 (62-219)||(6075081-6075238)
chr3 (62-219)||(47864191-47864348)
chr3 (62-219)||(37074958-37075117)
chr3 (62-219)||(7866450-7866607)
chr3 (62-219)||(46711625-46711781)
chr3 (66-219)||(579112-579258)
chr3 (62-213)||(53270233-53270386)
chr3 (62-219)||(54464863-54465019)
chr3 (62-219)||(50730109-50730266)
chr3 (62-219)||(50782588-50782745)
chr3 (62-219)||(19464075-19464234)
chr3 (62-219)||(2927289-2927447)
chr3 (62-219)||(8703109-8703262)
chr3 (62-219)||(9054996-9055149)
chr3 (62-219)||(26208014-26208171)
chr3 (63-215)||(20847240-20847391)
chr3 (62-219)||(29235193-29235344)
chr3 (62-212)||(32619804-32619954)
chr3 (62-214)||(41476308-41476453)
chr3 (62-219)||(26724958-26725115)
chr3 (13-215)||(23910484-23910668)
chr3 (109-219)||(31836966-31837076)
chr3 (121-219)||(9264610-9264708)
chr3 (67-168)||(34722623-34722724)
chr3 (62-190)||(3972275-3972402)
chr3 (62-190)||(3997476-3997603)
chr3 (62-219)||(47115849-47116006)
chr3 (72-219)||(8096985-8097132)
chr3 (62-192)||(6752670-6752800)
chr3 (72-168)||(34194892-34194988)
chr3 (62-150)||(46557237-46557325)
chr3 (72-219)||(22479021-22479168)
chr3 (72-219)||(30454692-30454838)
chr3 (79-192)||(16032981-16033094)
chr3 (62-158)||(47866941-47867036)
chr3 (72-195)||(38401384-38401507)
chr3 (62-131)||(33974614-33974683)
chr3 (72-219)||(10114915-10115062)
chr3 (72-219)||(22455975-22456122)
chr3 (72-194)||(7886609-7886731)
chr3 (72-194)||(21214245-21214367)
chr3 (72-194)||(46918205-46918327)
chr3 (62-151)||(38674870-38674959)
chr3 (72-187)||(10252015-10252130)
chr3 (126-219)||(33973533-33973627)
chr3 (62-118)||(48802548-48802604)
chr3 (72-187)||(10014273-10014388)
chr3 (72-219)||(47443941-47444087)
chr3 (112-219)||(8769546-8769651)
chr3 (110-219)||(3084147-3084256)
chr3 (71-196)||(31126214-31126339)
chr3 (72-168)||(48291826-48291922)
chr3 (71-190)||(1335112-1335231)
chr3 (62-125)||(9264008-9264071)
chr3 (121-219)||(31292664-31292762)
chr3 (62-189)||(41936195-41936313)
chr3 (126-168)||(54725628-54725670)
chr3 (72-194)||(2994407-2994532)
chr3 (119-219)||(8764646-8764744)
chr3 (71-156)||(51426621-51426706)
chr3 (71-196)||(55400740-55400865)
chr3 (134-194)||(6784390-6784450)
chr3 (67-102)||(34722564-34722599)
chr3 (137-219)||(25242145-25242227)
chr3 (90-219)||(36150946-36151076)
chr3 (142-219)||(17587779-17587856)
chr3 (137-190)||(46557166-46557219)
chr3 (170-213)||(2878210-2878253)
chr3 (64-103)||(8769644-8769683)
chr3 (73-168)||(23209298-23209393)
chr3 (112-167)||(30612221-30612276)
chr3 (13-43)||(14752382-14752412)
chr3 (62-104)||(36509540-36509582)
chr3 (110-156)||(45868536-45868582)
chr3 (64-101)||(8764746-8764783)
chr3 (132-196)||(34022662-34022726)
chr3 (13-41)||(37074878-37074906)
chr3 (132-196)||(45781460-45781524)
chr3 (189-217)||(47866893-47866921)
[»] scaffold0045 (1 HSPs)
scaffold0045 (13-219)||(77904-78110)
[»] scaffold0774 (1 HSPs)
scaffold0774 (13-208)||(3447-3642)
[»] scaffold0442 (1 HSPs)
scaffold0442 (13-215)||(9992-10194)
[»] scaffold0062 (1 HSPs)
scaffold0062 (62-219)||(44779-44936)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-219)||(154808-155013)
[»] scaffold0009 (2 HSPs)
scaffold0009 (62-219)||(157790-157947)
scaffold0009 (62-153)||(52676-52767)
[»] scaffold0132 (4 HSPs)
scaffold0132 (62-219)||(1008-1165)
scaffold0132 (62-219)||(8968-9125)
scaffold0132 (13-41)||(928-956)
scaffold0132 (13-41)||(8888-8916)
[»] scaffold0111 (1 HSPs)
scaffold0111 (62-209)||(40175-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (62-192)||(160246-160376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (72-195)||(5907-6030)
[»] scaffold0005 (1 HSPs)
scaffold0005 (62-219)||(233495-233652)
[»] scaffold0010 (1 HSPs)
scaffold0010 (93-194)||(160952-161053)
[»] scaffold1786 (1 HSPs)
scaffold1786 (112-182)||(893-963)
[»] scaffold0330 (1 HSPs)
scaffold0330 (72-194)||(3174-3296)
[»] scaffold1157 (1 HSPs)
scaffold1157 (122-204)||(1690-1772)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 4e-92; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 47867824 - 47868030
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||| ||||||||||||||| |||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47867824 aatataagcaaaaaagaaaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 47867923  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47867924 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 47868023  T
Q  213 ttagttt 219  Q
    |||||||    
T  47868024 ttagttt 47868030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 2229192 - 2229398
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||||||||||||||||||| |         ||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  2229192 aatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttttctttca 2229291  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2229292 ttttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 2229391  T
Q  213 ttagttt 219  Q
    |||||||    
T  2229392 ttagttt 2229398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 20281538 - 20281742
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||  ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20281538 aatataagcaaaaaagaca--cttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctttttctttca 20281635  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20281636 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 20281735  T
Q  213 ttagttt 219  Q
    |||||||    
T  20281736 ttagttt 20281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 14332704 - 14332911
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    |||||||||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14332704 aatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttc 14332803  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14332804 atttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaaccatattccaaattcttatgt 14332903  T
Q  212 tttagttt 219  Q
    ||||||||    
T  14332904 tttagttt 14332911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 26916270 - 26916476
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||| ||||||||||| ||| |||||          ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  26916270 aatataagcaaaaaagataaacttttatccttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttatttttctttca 26916369  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26916370 ttttttccataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaccatactccaaattcttatgtt 26916469  T
Q  213 ttagttt 219  Q
    |||||||    
T  26916470 ttagttt 26916476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 4058709 - 4058866
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4058709 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4058809 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 4058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 29203500 - 29203657
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29203500 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 29203599  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||   ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29203600 aaaaaaatttgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 29203657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 56318278 - 56318075
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    ||||||||||||||||||| ||||||||||||||||| |         ||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  56318278 aatataagcaaaaaagacatacttttatcttttccaatatttttttttgtttattatcataaaattaaatgtaaattacattcaattttctctctctttc 56318179  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  56318178 attttttccataaccaatagctaatgaaaattgtttttacatcttcctataaacctttttccaaagaaaacacaaaaaaccatactctaaattcttatgt 56318079  T
Q  212 ttta 215  Q
    ||||    
T  56318078 ttta 56318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 20716174 - 20716331
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20716174 ttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 20716273  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||    
T  20716274 aaaactttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttt 20716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 39078151 - 39078307
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  39078151 ttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt-ctat 39078249  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39078250 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 39078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 41414816 - 41414612
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| |||||||||||||||||||||||| |||||          ||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  41414816 aatataagtaaaaaagacaaacttttatctttttcaagatttttttgt-ttattcttataaaattaaatgcaaattacattcaattttttctctctttca 41414718  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  41414717 ttttttc-ataatcaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccatattcttatgtt 41414619  T
Q  213 ttagttt 219  Q
    |||||||    
T  41414618 ttagttt 41414612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 55580663 - 55580821
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  55580663 ttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttccta 55580762  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  55580763 tacaactttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttt 55580821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 7654633 - 7654768
Alignment:
Q  84 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaaca 183  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaaca 7654732  T
Q  184 caaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7654733 caaaaaactatactccaaatttttatgttttagttt 7654768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 10069691 - 10069848
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10069691 ttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctat 10069790  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| | ||||||| ||||||||||||||| |||||||||||||||||||||    
T  10069791 aaaacttttttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttt 10069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 28669207 - 28669002
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||| |||||| ||||||||||| |||||          |||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  28669207 aatataagcaaaaaggacaaatttttatctttttcaagattttttttgtttattctcataaaattaaatacaaattacattcaattttctctctctttca 28669108  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||| ||||| |||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||    
T  28669107 ttttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaaactatactttaaattcttatgtt 28669009  T
Q  213 ttagttt 219  Q
    |||||||    
T  28669008 ttagttt 28669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 16604982 - 16604847
Alignment:
Q  84 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaaca 183  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaaca 16604883  T
Q  184 caaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16604882 caaaaaactatactctaaattcttatgttttagttt 16604847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 24940365 - 24940516
Alignment:
Q  68 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact 167  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  168 ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  24940465 ttttccaaagaaaatacaaaaaactatactccaaattcttacgttttagttt 24940516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 17794699 - 17794542
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17794699 ttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctat 17794600  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||| || || |||||||||| |||||||||||||| ||||||||| | |||||||||    
T  17794599 aaaatttatttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttt 17794542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 35310900 - 35310743
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  35310900 ttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccat 35310801  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  35310800 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttt 35310743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 5483436 - 5483279
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  5483436 ttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctat 5483337  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||  ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  5483336 taaacttattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttt 5483279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 42915523 - 42915681
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||||| | |    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcca 42915622  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    | |||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  42915623 tgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagttt 42915681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 48793784 - 48793631
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctct--cttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||||||  |||||||| || |||||||||||| ||||||||    
T  48793686 gaaacttattccaaagaaaacac--aaaactatgctacaaattcttatgctttagttt 48793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 8683462 - 8683307
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||||| || | ||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctct--cttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 8683365  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  8683364 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 8683307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 1585505 - 1585354
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||| ||||||||||| ||||||||||| ||||||| | ||    
T  1585505 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccat 1585406  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
     |||||| || ||||||||||||  |||| ||||||||||| ||||||||||||    
T  1585405 gaaacttatttcaaagaaaacac--aaaattatactccaaaatcttatgtttta 1585354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 35529666 - 35529760
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 156  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35529666 ttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 5815474 - 5815598
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||||||  |||||||||||||||||||| |||| | |||||||||||| |||||| |||| |||||| |||||||||||||  ||||||||| ||     
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttattt 5815573  T
Q  173 caaagaaaacacaaaaaactatact 197  Q
    |||||||||||||||||||||||||    
T  5815574 caaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 52535743 - 52535598
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||   |||  |||    
T  52535743 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattattttta---ctttatat 52535647  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||| |||||| ||||         |||||||||||||||||||||||| ||||||||    
T  52535646 aaaaatttttctaaag---------aaaactatactccaaattcttatgctttagttt 52535598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 50080609 - 50080457
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||| ||| ||||||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||| ||||||| ||||| || |||| ||    
T  50080609 ttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggttttatattttcccat 50080510  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
         || | | ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  50080509 -----ttatacaaaagaaaacacaaaaaattatactcaaaattcttatgttttagttt 50080457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 32203226 - 32203364
Alignment:
Q  74 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttcc 173  Q
    ||||||||| || |||||||||||||||||| | ||||||||||| |||||||||       ||||||||||||||| ||||||| ||||||||| || |    
T  32203226 aattaaatgtaatttacattcaattttctctatgtttcatttttttcataaccaa-------tgaaaattgtttttatatcttcccataaaacttatttc 32203318  T
Q  174 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||  |||||||||||||||  ||||||||||||||||||||    
T  32203319 aaagaaacaacaaaaaactatactttaaattcttatgttttagttt 32203364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 46070668 - 46070553
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| ||||  |||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  46070668 aaaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 46070571  T
Q  172 ccaaagaaaacacaaaaa 189  Q
     |||||| ||||||||||    
T  46070570 tcaaagacaacacaaaaa 46070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 16473828 - 16473899
Alignment:
Q  148 ttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatattttagttt 16473899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 47516339 - 47516216
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||| |||| | ||||  |||| |||| ||||||||||| || |||||||| | |||||||||||||||||||| |||||||||||||||| ||    
T  47516339 aaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatt 47516240  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
     |||||| ||||||||||||||||    
T  47516239 tcaaagataacacaaaaaactata 47516216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 50145731 - 50145865
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctata 162  Q
    |||| |||| ||||||||||  ||||||||| ||||||| || |||| |||||| ||||| | |||||||||||||||||||| |||||||||||| |||    
T  50145731 tattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccata 50145830  T
Q  163 aaactttttccaaagaaaacacaaaaaactatactc 198  Q
    |||||| |||||||| ||||||||| || |||||||    
T  50145831 aaacttattccaaag-aaacacaaacaattatactc 50145865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 5841927 - 5841805
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||| |||||||| | || ||||||| |||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| || ||    
T  5841927 aaaattcaatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatt 5841828  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  5841827 tcaaggataacacaagaaactat 5841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 8178387 - 8178265
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||| |||||  ||||||||||||||||||| |||||||||| ||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatt 8178288  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| ||||||  |||||||    
T  8178287 tcaaagataacacatgaaactat 8178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 19351851 - 19352003
Alignment:
Q  73 aaattaaatgcaaattacattcaatttt-ctctttctttcattttttccataaccaatagccaatgaaaattgttttt-acatcttcctataaaactttt 170  Q
    |||||||||||||||||||||||||||| |||| | || |||| ||| |||||| ||||||||||||||||||||||| ||||||||| || |||||| |    
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttat 19351950  T
Q  171 tccaaagaaaacac---aaaaaactatactccaa-attcttatgttttagttt 219  Q
    | ||| ||||||||   |||||||||||||||||  || ||||||||||||||    
T  19351951 ttcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttt 19352003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 32323419 - 32323278
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| |||||||||| ||||||| ||||||||||||| |||| |||||| || |||| |||  | |||||||||||||||||||||||||| ||    
T  32323419 ttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccat 32323321  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaatt 204  Q
    ||| ||| ||  |||||||||||||||||| ||||| ||||||    
T  32323320 aaatcttattttaaagaaaacacaaaaaacaatacttcaaatt 32323278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 21722776 - 21722683
Alignment:
Q  126 caatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||| |||| ||||||||  ||||||||||||||||||||    
T  21722776 caatagtcaatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttt 21722683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 25297380 - 25297235
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||| ||||||||||||||||||  | ||||  ||||| ||||||| ||||||||||||||||||||||||||||||| | ||    
T  25297380 ttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctttccat 25297281  T
Q  162 aaaactttttcc----aaagaaaacacaaaaaactatactccaaat 203  Q
     |||||| || |    ||| |||||||||||||||| |||| ||||    
T  25297280 gaaacttattacaaaaaaaaaaaacacaaaaaactagactctaaat 25297235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 5064803 - 5064656
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||||| |||||||| ||    
T  5064803 aaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatt 5064704  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||| |||  | ||||||  |||||||||||||    
T  5064703 tcaaagataacacaaaaaattatgttacaaattactatgttttagttt 5064656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 12002793 - 12002634
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| ||||||||||||||||||||||||| |      |||| || ||| |||||||||||| |||||| ||||||||||||||||||| | ||    
T  12002793 ttattttcatgaaattaaatgcaaattacattcaatatc-----tcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccat 12002699  T
Q  162 aaaactttttccaaagaaaa-------cacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||  ||||||| ||||       ||||||||||||||||||||||||||||||||||||||    
T  12002698 gaaactaattccaaaaaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttt 12002634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 17186940 - 17186822
Alignment:
Q  65 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaa 164  Q
    ||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  17186940 ttctcataaaattaaatgcaaatta-attcaat---------ctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaa 17186851  T
Q  165 actttttccaaagaaaacacaaaaaactat 194  Q
    |   ||| ||||||||| ||||||||||||    
T  17186850 aaaattt-caaagaaaatacaaaaaactat 17186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 31280193 - 31280329
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| || ||||||||| |||| | |||||||||||||||  ||| ||||| | ||||||| ||||||||||||||||| |||||||||      ||    
T  31280193 ttattctaatgaaattaaatacaaactgcattcaattttctct--cttccatttct-ccataac-aatagccaatgaaaattatttttacat------at 31280282  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  31280283 aaaacttattccaaagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 14583723 - 14583880
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | |||||||||||||| |||||||||||||||| ||    
T  14583723 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 14583821  T
Q  162 aaaactttttccaaag-aaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||  |||| |||||||||| |||||||    |||||||||| |||||||||    
T  14583822 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttt 14583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 219
Target Start/End: Complemental strand, 17799277 - 17799135
Alignment:
Q  77 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaa 176  Q
    |||||||||||| |||| |||||  |||  || ||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||||  ||||||     
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattccaag 17799178  T
Q  177 gaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     | ||||| | ||| ||||||||||||| | || |||||||||    
T  17799177 aagaacaccagaaattatactccaaattatcatattttagttt 17799135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 23978263 - 23978169
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac 166  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||    
T  23978263 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 32280111 - 32280009
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||| ||||||| ||||||||||| |||||||||||||||| |    || |||| | ||| ||||||||||||||||| ||||||||||||||||||||    
T  32280111 attttctccataatcaatagccaattaaaattgtttttacatatcttcatcaaacctattctaaagaaaacacaaaaaattatactccaaattcttatgt 32280012  T
Q  212 ttt 214  Q
    |||    
T  32280011 ttt 32280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 30012074 - 30011951
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  ||||| ||  ||||| |||||||  | || ||||||| ||||||||||||||||| | || |||||| |    
T  30012074 taaaattaaatgcaaattgcattcaatttgttctttttt--attttctccataataattaaccaatgataattgtttttacatctttccatgaaacttat 30011977  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||| | ||||||||||| |||||    
T  30011976 tccaaaaataacacaaaaaattatac 30011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 37911888 - 37912010
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||| ||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||| || ||||||||||| ||    
T  37911888 aaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttatt 37911987  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
      ||||| |||||||||||||||    
T  37911988 ttaaagataacacaaaaaactat 37912010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 49080261 - 49080379
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | ||||||||||  ||| | |||||||||  |  ||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  49080261 aaaattaaatgcaaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 49080360  T
Q  172 ccaaagaaaacacaaaaaa 190  Q
     |||||| || ||||||||    
T  49080361 tcaaagataagacaaaaaa 49080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 29511490 - 29511551
Alignment:
Q  133 caatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 194  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactat 29511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 32410332 - 32410452
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| |  ||||||||| |||| | ||| ||||| || ||||  || |||| |||||||||| |||||||||||||||||||||||| |    
T  32410332 aaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagc-aatgaaaattatttttacatcttcctataaaacttat 32410430  T
Q  171 tccaaagaaaacacaaaaaact 192  Q
    | |||||| |||||||||||||    
T  32410431 ttcaaagataacacaaaaaact 32410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 40553774 - 40553924
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    |||||||||||||||| |||||| ||| ||||   ||||| ||| |||||||| |||| ||||||||| ||||||||||||||| |||| |||||| |||    
T  40553774 aaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacatctttctatgaaacttattc 40553873  T
Q  173 caaagaaaacacaaaaaa----ctatactccaaattcttatgttttagttt 219  Q
     || || ||||||| |||    ||||||| |||| |  |||||||||||||    
T  40553874 taaggataacacaagaaagaaactatactgcaaactactatgttttagttt 40553924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 8013237 - 8013090
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||||||| || |||||| | |  ||| ||||||||||| || || || |||| ||||| ||||||||||||||||||| |||| |||||| ||    
T  8013237 aaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatt 8013138  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  8013137 tcaaggataacacaagaaactatgttacaaactactatgttttagttt 8013090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 28318565 - 28318445
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||||||||| ||   | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||  || ||    
T  28318565 aaaattaaatgtaaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa--ttatt 28318468  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  28318467 tcaaagataacacaaaaaactat 28318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 28142769 - 28142652
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||||||||   |||| ||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||| ||||||||||||| ||    
T  28142769 aaaattaaatgcaaaag-catttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttatt 28142671  T
Q  172 ccaaagaaaacacaaaaaa 190  Q
      ||||| |||||||||||    
T  28142670 ttaaagataacacaaaaaa 28142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 29180534 - 29180409
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| |||| |||||| |    
T  29180534 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctatgaaacttat 29180435  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  29180434 tccaaggagaacacaaaaaattatac 29180409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 7654572 - 7654610
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaaga 51  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7654572 aatataagcaaaaaagacaaacttttatcttttccaaga 7654610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 10591625 - 10591500
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| |||||||||   |||   ||| |||||||||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  10591625 taaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 10591526  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  10591525 tccaaggagaacacaaaaaattatac 10591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 30776606 - 30776481
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  30776606 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 30776507  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  30776506 tccaaggagaacacaaaaaattatac 30776481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 39970111 - 39969986
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  39970111 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 39970012  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  39970011 tccaaggagaacacaaaaaattatac 39969986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 47807193 - 47807318
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||| || |||| |||||||||||| | || |||||| |    
T  47807193 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaacgagaattatttttacatctttccatgaaacttat 47807292  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||||| ||||||||||| |||||    
T  47807293 tccaaagagaacacaaaaaattatac 47807318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 53677601 - 53677476
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| |||| |||||  |    
T  53677601 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctatgaaactcat 53677502  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  53677501 tccaaggagaacacaaaaaattatac 53677476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 50768443 - 50768567
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  50768443 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 50768542  T
Q  171 tccaaagaaaacacaaaaaactata 195  Q
    ||||| |||||||||||||| ||||    
T  50768543 tccaaggaaaacacaaaaaattata 50768567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 53848471 - 53848586
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||| |||||||||| | |||||||||| || | |||||||||||||| |||||||||        |||||||||||||| ||||||||||||| || ||    
T  53848471 aaaaataaatgcaaagtgcattcaatttgctttctctttcattttttcaataaccaatt-------aaaattgtttttacgtcttcctataaaaattatt 53848563  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  53848564 tcaaggataacacaagaaactat 53848586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 40411104 - 40411199
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac 166  Q
    |||||||||||| ||| | ||||||||||  ||| | ||||||||| ||  ||| |||   ||||| |||||||||||||||||||||||||||||    
T  40411104 taaaattaaatgtaaactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 32280145 - 32280104
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctc 103  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  32280145 ttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 37788449 - 37788574
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| |||||  ||| | ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  37788449 taaaattaaatgcaacttgcatttaatttgttctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 37788548  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  37788549 tccaaggagaacacaaaaaattatac 37788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 29899774 - 29899838
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | ||||||||| |||||| || ||||||||||| |||||    
T  29899774 ccaatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaaattatac 29899838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 7438760 - 7438799
Alignment:
Q  180 aacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttt 7438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 25268523 - 25268626
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||| ||||||||||||| |||||||||||| ||||||  ||||| | | |||||| || |||  | ||||||||||  ||||| ||||||| |||| |    
T  25268523 attttctccataaccaataaccaatgaaaattatttttatttcttcttgtgaaacttatttcaagtagaacacaaaaagatataccccaaattattatat 25268622  T
Q  212 ttta 215  Q
    ||||    
T  25268623 ttta 25268626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 29203421 - 29203451
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  29203421 aatataagcaaaaaagacaaacttttatctt 29203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 21722824 - 21722783
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctc 103  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  21722824 ttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 4058628 - 4058656
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  4058628 aatataagcaaaaaagacaaacttttatc 4058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 17187020 - 17186992
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  17187020 aatataagcaaaaaagacaaacttttatc 17186992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 14805817 - 14806022
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14805817 aatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 14805916  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  14805917 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt-caaagaaaatacaaaaaactatactccaaattcttatgtt 14806015  T
Q  213 ttagttt 219  Q
    |||||||    
T  14806016 ttagttt 14806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 15252811 - 15253016
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15252811 aatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 15252910  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  15252911 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt-caaagaaaatacaaaaaactatactccaaattcttatgtt 15253009  T
Q  213 ttagttt 219  Q
    |||||||    
T  15253010 ttagttt 15253016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 25737840 - 25737634
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||| | |||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25737840 aatataagcaaaaaaaaaaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 25737741  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  25737740 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacacaaaactataccccaaatttttatgtt 25737641  T
Q  213 ttagttt 219  Q
    |||||||    
T  25737640 ttagttt 25737634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 19912982 - 19912776
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||  ||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19912982 aatataaataaaaaagacaaacttttatcttttccaagatttttttttgttattctcatgaaattaaatgcaaattacattcaattttctctttctttca 19912883  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19912882 ttttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 19912783  T
Q  213 ttagttt 219  Q
    |||||||    
T  19912782 ttagttt 19912776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 45485950 - 45486108
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45485950 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttccta 45486049  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45486050 taaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 45486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 46760422 - 46760264
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46760422 gttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 46760323  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46760322 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 46760264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 18102476 - 18102683
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    ||||||||||||||||||||||||||||||||| |||||         ||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  18102476 aatataagcaaaaaagacaaacttttatctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttcactctctttc 18102575  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18102576 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgt 18102675  T
Q  212 tttagttt 219  Q
    ||||||||    
T  18102676 tttagttt 18102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 35923199 - 35923404
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||  |||||||| ||||||||||||||| ||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35923199 aatataataaaaaaagataaacttttatctttttcaatatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 35923298  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  35923299 ttttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacac-aaaaactatactccaaatttttatgtt 35923397  T
Q  213 ttagttt 219  Q
    |||||||    
T  35923398 ttagttt 35923404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 20123844 - 20123691
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20123844 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctat 20123745  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20123744 aaaactttttccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 25944572 - 25944729
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25944572 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 25944671  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  25944672 aaaactttttccaaagaaaacacaaaaacttatactccaaattcttatattttagttt 25944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 6191041 - 6191198
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6191041 ttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6191140  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  6191141 aaaacttttttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 6191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 4910797 - 4910642
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  4910797 ttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctat 4910698  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||    
T  4910697 aaaactttttctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttt 4910642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 47779600 - 47779757
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| ||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||| ||||||||||||||||||||| || |||||||||||| ||||||||    
T  47779700 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 47779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 22632085 - 22632242
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  22632085 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccat 22632184  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| || ||||||||||||||||| |||| || |||| | ||||| ||||||||    
T  22632185 gaaacttatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttt 22632242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 47557765 - 47557622
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  47557765 ttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctat 47557666  T
Q  162 aaaacttttt--ccaaagaaaacacaaaaaactatactccaaat 203  Q
    |||  |||||    ||| ||||||||||||||||||||||||||    
T  47557665 aaattttttttaaaaaaaaaaacacaaaaaactatactccaaat 47557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 12632470 - 12632355
Alignment:
Q  100 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactcc 199  Q
    ||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  12632470 tctctctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactcc 12632371  T
Q  200 aaattcttatgtttta 215  Q
    ||||||||||||||||    
T  12632370 aaattcttatgtttta 12632355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 14574560 - 14574717
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||    
T  14574560 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccat 14574659  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||    
T  14574660 gaaacttattatcaagaaaacacaaaaaactatactccaaattcttatattttggttt 14574717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 44682874 - 44683030
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||| |||||||||||| ||||||||| | |||||||||| | ||||||||||||| |||||||||||||||||||||||||  ||    
T  44682874 ttattctcatgaaattaattgcaaattacatccaattttctatatctttcatttct-ccataaccaatagtcaatgaaaattgtttttacatcttcgcat 44682972  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||| ||||||||||| | |||||||||||||||||| || ||||||    
T  44682973 caaacttattccaaaaaaaacacaaaatattatactccaaattcttattttctagttt 44683030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 11780014 - 11780170
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| | |||||  ||||| ||||| ||||| |||||||||||||| ||    
T  11780014 ttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatg-aaattatttttacatcttccaat 11780112  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||| || ||  ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  11780113 aaaatttattttaaagaaaacacgaaaaactatattccaaattcttatattttagttt 11780170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 2610732 - 2610586
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctt-tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||||| ||||||| |||||||||||||||||||| |||| |||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||    
T  2610732 ttattctcatgaaattaagtgcaaattacattcaatttt-tcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttcta 2610634  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    ||||  || |||||||| || | ||||||| |||||||||||||||||    
T  2610633 taaattttattccaaaggaagcgcaaaaaaatatactccaaattctta 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 15995715 - 15995873
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | ||||||||||| |||||| ||||| |||||||||||| | ||    
T  15995715 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccat 15995814  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||   |||||||||| ||||||||||||||||||||||||| |||| ||||    
T  15995815 gaaacttattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttt 15995873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 9158086 - 9158194
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| ||||||||||||||||||||||||||| ||| | | |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  9158086 ttattcttataaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctat 9158184  T
Q  162 aaaacttttt 171  Q
    ||||||||||    
T  9158185 aaaacttttt 9158194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 16917468 - 16917620
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| | |  ||||||  | |||||||||||  ||||||||||||||||||||||||| ||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcac-ataaccaatagttaatgaaaattgtttttacatcttcccat 16917566  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
     |||||| |||||||||||| ||||||   |||| | |||||| ||||||||||    
T  16917567 gaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgtttta 16917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 48413723 - 48413866
Alignment:
Q  68 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact 167  Q
    |||| ||||||||||||||||| ||||||||||||||  |||  ||||| |||||||||||||| ||||||||||||||||| |||||||  ||||||||    
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctct--cttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaact 48413819  T
Q  168 ttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    | ||   || |||||||  |||| ||||||||||||||||||||| ||||||    
T  48413820 tatt---aaaaaaacac--aaaattatactccaaattcttatgttgtagttt 48413866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 31550042 - 31549936
Alignment:
Q  87 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaa 186  Q
    |||||||||||||||| |||||  | ||||| ||||||||||| | |||||||| |||||||||||||||||||||||| || ||| ||||||||| |||    
T  31550042 ttacattcaattttctttttctcccctttttcccataaccaattgtcaatgaaagttgtttttacatcttcctataaaatttattctaaagaaaacgcaa 31549943  T
Q  187 aaaacta 193  Q
    |||||||    
T  31549942 aaaacta 31549936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 35068999 - 35068872
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||| ||||||||||||||||||||||||              |||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  35068999 ttattctcataatattaaatgcaaattacattcaatt--------------ttttctctataaccaatagctaattaaaattgtttttacatcttcctat 35068914  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaa 202  Q
    |||||||||| |||||||||||| ||||||||||| ||||||    
T  35068913 aaaacttttttcaaagaaaacacaaaaaaactatattccaaa 35068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 39170540 - 39170662
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || |||| ||||  | |||||||||||||||||||||||| |||||||||| ||    
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatt 39170639  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  39170640 tcaaggataacacaataaactat 39170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 12633200 - 12633110
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctc 103  Q
    ||||||| ||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  12633200 aatataatcaaaatagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 24151734 - 24151640
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    |||||| ||||||| |||||||||||| |||| |||||| |||| || ||||||||||  || |||||||||||||||||||||||||||||||||    
T  24151734 aaattacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaactt 24151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 195
Target Start/End: Original strand, 38260322 - 38260445
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||| ||||| |||| ||||||||||| || ||||  |||| |||||||||||| |||||||| ||| ||||||||||| ||    
T  38260322 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
     |||  | ||||||||||||||||    
T  38260422 tcaagaataacacaaaaaactata 38260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 27810898 - 27810804
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||| |||||| |  |||| ||||| ||||| ||||||||||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttc 27810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 31769116 - 31768994
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| ||||   ||| ||||| || |||| |||    |||||||||||||||||||||||||||||||||||| ||    
T  31769116 aaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 31769017  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||||||  ||||||||||||||    
T  31769016 tcaaagatgacacaaaaaactat 31768994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 4237880 - 4237720
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||| |||||||||||||||||||| |||||||| | | | |||| |||||| | | ||| ||||||||||| |||||| |||||||||||||  |    
T  4237880 gttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttctca 4237781  T
Q  161 taaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagtttg 220  Q
    | ||| || || |||| |||| || ||||||||||| |  |||||||||| ||||| ||||    
T  4237780 tgaaagttatttcaaaaaaaatacaaaaaaactatattttaaattcttatattttactttg 4237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 35888123 - 35887976
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||| ||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   | |||||||||||||||||||||||||||||||| || ||    
T  35888123 aaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatt 35888024  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||| |||  | |||| |  |||||||||||||    
T  35888023 tcaaagataacacaaaaaattatgttacaaactactatgttttagttt 35887976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 4069043 - 4069108
Alignment:
Q  106 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||| |||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  4069043 tcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaacttttt 4069108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 8015813 - 8015732
Alignment:
Q  84 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact 167  Q
    ||||| |||||||||||||||  ||| ||||||||| |||| ||||| ||||| |||||||||||||||||||| |||||||||    
T  8015813 aaattgcattcaattttctct--cttgcattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaact 8015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 21654235 - 21654116
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||||||||||||||  |||   ||||||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  21654235 taaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 21654136  T
Q  171 tccaaagaaaacacaaaaaa 190  Q
    ||||| || |||||||||||    
T  21654135 tccaaggagaacacaaaaaa 21654116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 37767172 - 37767026
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||| |||||||| |||| |||||  |||  || |||||||||| ||| | ||||    |||||||||||||||| || |||| || ||| |  ||     
T  37767172 aaattaagtgcaaattgcatttaatttgttctccctctcattttttctatagcaaataattgatgaaaattgtttttatatgttcccatgaaattagttt 37767073  T
Q  173 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||||||||||||||||||||||||||||||| | ||||||||||||    
T  37767072 taaagaaaacacaaaaaactatactccaaattatcatgttttagttt 37767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 29713196 - 29713325
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||||||||||||| ||| | | | | || ||||||||||| || ||||  |||| ||||||||||||||||||||| ||| |||| ||| || |||    
T  29713196 aaattaaatgcaaattatatttattataccctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattc 29713295  T
Q  173 caaagaaaacacaaaaaactatactccaaa 202  Q
     |||||  |||||| |||||||||| ||||    
T  29713296 taaagatgacacaagaaactatactacaaa 29713325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 33153039 - 33153187
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttc-attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    |||||||||||||||||| ||||||||||  |||  ||||| ||||| ||||||| || || ||||| | ||||||||||||||||| | |||||| ||     
T  33153039 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaattta 33153137  T
Q  170 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    || |||  | ||||||||||| |||||| |||| | ||||||||| ||||    
T  33153138 tttcaagaagaacacaaaaaattatacttcaaactattatgtttttgttt 33153187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 48879388 - 48879513
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| ||||||||||| |    
T  48879388 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctataaaacttat 48879487  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || || |||||||| |||||    
T  48879488 tccaaggagaatacaaaaaattatac 48879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 35084215 - 35084067
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| |||| |||||  |||   ||||||||| ||||||| || || ||||| | |||||||||||||||||  ||| |||||| |    
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttat 35084116  T
Q  171 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    | |||  | ||||||||||||||||   ||||||  | |||||||||||    
T  35084115 ttcaagaagaacacaaaaaactataactcaaattactgtgttttagttt 35084067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 35181192 - 35181317
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  35181192 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctttccatgaaacttat 35181291  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  35181292 tccaaggagaacacaaaaaattatac 35181317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 43108019 - 43107894
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  43108019 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 43107920  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  43107919 tccaaggagaacacaaaaaattatac 43107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 19492559 - 19492400
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||| ||| ||||||||| ||||||| |||||||||||| | ||||  ||||| ||||||||||| || | || |||||||||||| ||| || | ||    
T  19492559 ttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttttgcatattaccat 19492460  T
Q  162 aa--aactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |  || ||| |  ||| |||| |||||||  ||||||| ||||| ||||||||||||||    
T  19492459 gatgaaatttattaaaaaaaaatacaaaaagttatactctaaatttttatgttttagttt 19492400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 40560382 - 40560530
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| ||||||||||| |    
T  40560382 taaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctataaaacttat 40560481  T
Q  171 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    | ||| || ||||||||||| |||||  |||||| ||| || |||||||    
T  40560482 ttcaaggagaacacaaaaaattatacctcaaattattaagtgttagttt 40560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 10248594 - 10248657
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaa-aaaactat 194  Q
    ||||||||||||||||||||||||| ||||||||||| || ||| || ||||||| ||||||||    
T  10248594 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactat 10248657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 3777984 - 3778106
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || |||||||||   ||||||||||| |||||| || |||||  |||| || ||    
T  3777984 aaaattaaatgaaaagtgcattcaatttgctttctctttcattttctcaataaccaatgatcaatgaaaattatttttatattttcctggaaaaattatt 3778083  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  3778084 tcaaggataacacaataaactat 3778106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 41815807 - 41815682
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||| || || ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | ||||||||| |    
T  41815807 taaaattaaatgtaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaacttat 41815708  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  41815707 tccaaggagaacacaaaaaattatac 41815682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 48938003 - 48937878
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||| |||||| ||||||||||  |||   ||| ||||| |||||||    || ||||| | |||| |||||||||||| | ||||||||| |    
T  48938003 taaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatttttacatctttccataaaacttat 48937904  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  48937903 tccaaggagaacacaaaaaattatac 48937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 4068972 - 4069020
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaa-ttttctctttcttt 110  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4068972 tattctcatgaaattaaatacaaattacattcaatttttctctttcttt 4069020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 22369233 - 22369313
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 153  Q
    ||||||||||||| || |||||| | | |||| ||||||||||| || ||||| |||| ||||| |||||| |||||||||    
T  22369233 aaattaaatgcaatttgcattcattatgctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 45485900 - 45485936
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaa 49  Q
    ||||||||||||||||||||| |||||||||||||||    
T  45485900 aatataagcaaaaaagacaaaattttatcttttccaa 45485936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 19933169 - 19933050
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  19933169 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 19933070  T
Q  171 tccaaagaaaacacaaaaaa 190  Q
    ||||| || |||||||||||    
T  19933069 tccaaggagaacacaaaaaa 19933050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 19964308 - 19964189
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  19964308 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 19964209  T
Q  171 tccaaagaaaacacaaaaaa 190  Q
    ||||| || |||||||||||    
T  19964208 tccaaggagaacacaaaaaa 19964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 33092792 - 33092669
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaa-ttgtttttacatcttcctataaaacttttt 171  Q
    |||||||||||||| | |||||| | | ||||| ||||||||||  | ||||| |||| ||||| |||| |||||||||||| || |||| |||||| ||    
T  33092792 aaattaaatgcaaaatgcattcattatgctcttcctttcattttcactataactaataaccaataaaaaattgtttttacatttttctatgaaacttatt 33092693  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
      || || ||||||| ||||||||    
T  33092692 ttaatgataacacaagaaactata 33092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 16562744 - 16562778
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattca 95  Q
    |||||||||||||||||||||||||||||| ||||    
T  16562744 gttattctcataaaattaaatgcaaattactttca 16562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 16602918 - 16602884
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattca 95  Q
    |||||||||||||||||||||||||||||| ||||    
T  16602918 gttattctcataaaattaaatgcaaattactttca 16602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 25944492 - 25944522
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  25944492 aatataagcaaaaaagacaaacttttatctt 25944522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 39174197 - 39174235
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaaga 51  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  39174197 aatataagtaaaaaagacaaacttttatctttttcaaga 39174235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 47557960 - 47557922
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaaga 51  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  47557960 aatataagcaaaaaagacaaacttttatgtttttcaaga 47557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 3157436 - 3157561
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  3157436 taaaattaaatgcaagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 3157535  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    | |||||| ||||||||||| |||||    
T  3157536 ttcaaagagaacacaaaaaattatac 3157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 18206433 - 18206308
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| ||  ||| |||||  |||   ||| |||||||||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  18206433 taaaattaaatgcaagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 18206334  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  18206333 tccaaggagaacacaaaaaattatac 18206308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 29236181 - 29236057
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||  ||||| ||||||||||| |||   ||| ||| | ||||||| || || ||||| ||||||||||||| || || |||| |||||| |    
T  29236181 taaaattaaatataaattgcattcaatttt-tctcctttttattctctccataatcattaaccaataaaaattgtttttatatatttctatgaaacttat 29236083  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||| | || |||||||| |||||    
T  29236082 tccaaaaagaatacaaaaaattatac 29236057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 30082353 - 30082438
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 156  Q
    |||||||||||||||||| ||||||||||  ||| | ||  ||| | ||||||| || || ||||| | |||||||||||||||||    
T  30082353 taaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacatctt 30082438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 41890356 - 41890303
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataa 124  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    
T  41890356 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataa 41890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 9818529 - 9818593
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | ||||||||| |||||| || |||| |||||| |||||    
T  9818529 ccaatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaaattatac 9818593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 10720454 - 10720518
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | ||||||||| |||||| || |||| |||||| |||||    
T  10720454 ccaatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaaattatac 10720518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 16562695 - 16562731
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaa 49  Q
    |||||||| |||||||||||| |||||||||||||||    
T  16562695 aatataagtaaaaaagacaaatttttatcttttccaa 16562731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16602967 - 16602931
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaa 49  Q
    |||||||| |||||||||||| |||||||||||||||    
T  16602967 aatataagtaaaaaagacaaatttttatcttttccaa 16602931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 21542365 - 21542571
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||||||||||||||||||| |         ||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21542365 aatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttttctttca 21542464  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21542465 ttttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 21542564  T
Q  213 ttagttt 219  Q
    |||||||    
T  21542565 ttagttt 21542571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 35129269 - 35129062
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||| ||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35129269 aatacaagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcgtaaaattaaatgcaaattacattcaattttctctttctttca 35129170  T
Q  113 ttttttccataaccaatagccaatgaaaattgttt-ttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35129169 ttttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 35129070  T
Q  212 tttagttt 219  Q
    ||||||||    
T  35129069 tttagttt 35129062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 11082411 - 11082253
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11082411 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctcccta 11082312  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11082311 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 11082253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 34177855 - 34177653
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| |||||| |||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34177855 aatataagtaaaaaacacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattatctctttctttca 34177756  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  34177755 ttttttccataaccaatagccaatgaaaattgtttttacatctccctataaatttttttccaaagaaaacacaaaaaactatattccaaattcttatgtt 34177656  T
Q  213 tta 215  Q
    |||    
T  34177655 tta 34177653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 3095935 - 3095728
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnn--gttattctcataaaattaaatgcaaattacattcaattttctctttcttt 110  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3095935 aatataagcaaaaaagacaaacttttatcttttccaagatttttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttattt 3095836  T
Q  111 cattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatg 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  3095835 cattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaac-ttttccaaagaaaacacaaaaaactatactccaaatttttatg 3095737  T
Q  211 ttttagttt 219  Q
     ||||||||    
T  3095736 ctttagttt 3095728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 7275040 - 7274883
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7275040 ttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccat 7274941  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||| |||||||||||| || |||||||||||||||||||||    
T  7274940 gaaacttattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttt 7274883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 30794357 - 30794200
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| ||||  ||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  30794357 ttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctat 30794258  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||||||| |||||| |||||| |||||| ||||||||||| |||||||||    
T  30794257 aaaacttattccaaataaaacataaaaaattatacttcaaattcttatattttagttt 30794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 12461594 - 12461437
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| |||||||||||||||||||| | ||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12461594 ttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctat 12461495  T
Q  162 -aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||||||| || ||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  12461494 aaaaacttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttt 12461437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 17751909 - 17751756
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| || ||| |||||||||||||||||||||||| ||| |||| |||||| ||||||| |||||||||||||  | ||||||||||| ||   |     
T  17751909 ttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacattttttaaa 17751810  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||||  || |||||||||||||||||||||||||||||||||||| |||||    
T  17751809 aaaacttaatctaaagaaaacacaaaaaactatactccaaattcttatatttta 17751756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 31107187 - 31107320
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| |||||||||||||||||||||||||||||| || | |||||||||||||| |||| |||||| |||| |||||  ||||||||| ||| |||    
T  31107187 ttattcttataaaattaaatgcaaattacattcaattt-ctttctctttcattttttctataatcaatagtcaataaaaatcatttttacattttcttat 31107285  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatac 196  Q
    |||  ||||| ||||||||||||||||||||||||    
T  31107286 aaattttttttcaaagaaaacacaaaaaactatac 31107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 4031991 - 4032113
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||| ||||||||| ||    
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatt 4032090  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  4032091 tcaaagataacacaaaaaactat 4032113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 4987947 - 4988069
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   |||||||||||| |||||||||||||||||||||||| ||    
T  4987947 aaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 4988046  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  4988047 tcaaagataacacaaaaaactat 4988069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 16524384 - 16524505
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  16524384 aaaattaaatgcaaagtgcattcaatttgttctct-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16524482  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  16524483 tcaaagataacacaaaaaactat 16524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 9428766 - 9428844
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaa 140  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| ||||| |||||||| ||||||||||||||||||||    
T  9428766 ttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 16013583 - 16013465
Alignment:
Q  76 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaa 175  Q
    ||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| || |||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaa 16013484  T
Q  176 agaaaacacaaaaaactat 194  Q
    ||| || ||||||||||||    
T  16013483 agataatacaaaaaactat 16013465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 3888431 - 3888553
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   || ||||||||||||| |||||||||||||||||||| ||    
T  3888431 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatt 3888530  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||| | |||||||| ||||||    
T  3888531 tcaaatataacacaaataactat 3888553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 17598294 - 17598419
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  ||| | ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |||||| || |    
T  17598294 taaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 17598393  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||||| ||||||||||| |||||    
T  17598394 tccaaagagaacacaaaaaattatac 17598419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 14573293 - 14573136
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||| ||||| |||||||||  |||||| ||| |||||| | || |||  |||||| ||||||| ||| |  ||||||||||| |||||||||| ||| |    
T  14573293 ttatactcatgaaattaaatttaaattatattaaatttttttctctctaccattttctccataatcaacaaacaatgaaaattatttttacatcatccca 14573194  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||| |||| || ||||||||| || ||||| |||||||||||||| ||| |||||||||    
T  14573193 taatacttatttcaaagaaaatac-aaaaattatactccaaattcatatattttagttt 14573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 5300701 - 5300659
Alignment:
Q  126 caatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  5300701 caataaccaatgaaaattgtttttacatcttcctataaaactt 5300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 5822123 - 5822042
Alignment:
Q  138 aaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||| |||| |||||| ||||||||| ||||||| ||| |||||| |||| | | || |||||||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttt 5822042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 5881872 - 5881760
Alignment:
Q  107 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattct 206  Q
    |||||||||| || ||||  |||| ||||| ||||||||||||||||||| |||| ||||||  |||||||| |||| || ||| |||||| |||| | |    
T  5881872 ctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaacttagtccaaagataacagaagaaattatactgcaaactat 5881773  T
Q  207 tatgttttagttt 219  Q
     || |||||||||    
T  5881772 aatattttagttt 5881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 21963958 - 21964082
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||| ||||| ||| ||||||  ||| | ||| ||||| ||||| | ||||| ||||| |||||| |||||||||||| | ||||||||| |    
T  21963958 taaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaacttat 21964057  T
Q  171 tccaaagaaaacacaaaaaactata 195  Q
    |  || || ||||||||||| ||||    
T  21964058 tttaaggagaacacaaaaaattata 21964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 9428857 - 9428898
Alignment:
Q  178 aaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  9428857 aaaacacaaaaaattatacttcaaattcttatgttttagttt 9428898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 16870947 - 16870828
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataac-caatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||| |||||||||||| ||| ||||  |||||||||| |  |||||  |||| ||||| ||| ||| ||||| ||||| |||| |||||| ||    
T  16870947 aaattaaatgaaaattacattcattttgctctccctttcattttctttataactaaataaccaataaaagttgattttaaatctttctatgaaacttatt 16870848  T
Q  172 ccaaagaaaacacaaaaaac 191  Q
      ||||| ||||||||||||    
T  16870847 ttaaagataacacaaaaaac 16870828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 15830760 - 15830846
Alignment:
Q  133 caatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||| ||||||||||||||||| |||||| ||  ||| | ||||||||||| |||  |  ||| | ||||||||||||||    
T  15830760 caatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaaattatgttagaaactattatgttttagttt 15830846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 2e-87; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 43590176 - 43589970
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||| ||||||||||||||||| |||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43590176 aatataagcaaaaaatacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 43590077  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43590076 ttttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttttcaaaagaaaacacaaaaaactatactccaaattcttatgtt 43589977  T
Q  213 ttagttt 219  Q
    |||||||    
T  43589976 ttagttt 43589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 6686330 - 6686538
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnn-gttattctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    ||||||| ||||||||| |||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6686330 aatataaacaaaaaagataaacttttatcttttccaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttc 6686429  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac-tttttccaaagaaaacacaaaaaactatactccaaattcttatg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6686430 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaattcttatg 6686529  T
Q  211 ttttagttt 219  Q
    |||||||||    
T  6686530 ttttagttt 6686538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 11262098 - 11261892
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11262098 aatataagtaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttca 11261999  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||     
T  11261998 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaattctcatgtg 11261899  T
Q  213 ttagttt 219  Q
    |||||||    
T  11261898 ttagttt 11261892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 37522804 - 37522597
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttc 111  Q
    |||||||||||||||||||||||||||||||||||| ||           ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  37522804 aatataagcaaaaaagacaaacttttatcttttccatgattttttttgtctattctcataaaaattaaatgcaaattacattcaattttctctgtctttc 37522705  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37522704 attttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactatactccaaattcttatgt 37522605  T
Q  212 tttagttt 219  Q
    ||||||||    
T  37522604 tttagttt 37522597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 37562976 - 37562769
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37562976 aatataagcaaaaaagacaaacttttatcttttccatgattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttca 37562877  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttcc-aaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  37562876 ttttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactatactccaaattcttatgt 37562777  T
Q  212 tttagttt 219  Q
    ||||||||    
T  37562776 tttagttt 37562769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 20644010 - 20644167
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20644010 ttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20644110 aaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 20644167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 42273645 - 42273800
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  42273645 ttattctcataaaattaaatgcaaattgcattcaattttctct--ctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 42273742  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42273743 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 42273800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 34425327 - 34425483
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  34425327 ttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctat 34425425  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  34425426 aaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 34425483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 20039100 - 20039255
Alignment:
Q  64 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 163  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  20039100 attctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataa 20039199  T
Q  164 aactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  20039200 aacctttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 20039255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 38130281 - 38130121
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  38130281 ttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctat 38130182  T
Q  162 aaaactttttccaaagaaaacacaaaaa---actatactccaaattcttatgttttagttt 219  Q
    ||||||||||| ||||||||||||||||   |||||| |||||||||||||||||||||||    
T  38130181 aaaactttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttt 38130121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 32110998 - 32111144
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  32110998 ttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctat 32111097  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
     ||||||||| |||||||||||||||| | |||||||||||||||||    
T  32111098 gaaacttttttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 8225459 - 8225608
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttt-acatcttccta 160  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| || ||||| |||| ||||||    
T  8225459 ttattctcataaaattaaatgcaaattacgttcaattttctct--ctttcattttttccataaccaatagccaatgaaattttttttttacattttccta 8225556  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  8225557 taaaactttttccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 19413138 - 19413294
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctata 162  Q
    ||||||||| ||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  163 aaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||| || |||||||||||||||||||||| || |||||||||||  ||||||||    
T  19413238 aaacttatttcaaagaaaacacaaaaaactatgctacaaattcttatactttagttt 19413294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 25840860 - 25841017
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| | |||||||||||||||||||||||||| ||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccat 25840959  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||||    
T  25840960 gaaacttattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttt 25841017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 38280843 - 38280969
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  38280843 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctat 38280942  T
Q  162 aaaactttttccaaagaaaacacaaaa 188  Q
    |||||||||| |||||||| |||||||    
T  38280943 aaaacttttttcaaagaaagcacaaaa 38280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 39505397 - 39505250
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||| ||||||| ||| |||||||||||||||||||||||||| | ||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttt-ccataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  162 aaaactttttccaaagaaaacacaa-aaaactatactccaaattcttat 209  Q
    ||||||| ||||||||||||||||| |||||||| || |||||||||||    
T  39505298 aaaacttattccaaagaaaacacaaaaaaactatgctacaaattcttat 39505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 4463356 - 4463511
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||| ||||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  4463356 ttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccat 4463455  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     || ||| |||||||||||||||  | ||| || || |||||||||||| ||||||||    
T  4463456 gaagcttattccaaagaaaacac--acaaccatgctacaaattcttatgctttagttt 4463511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 17351384 - 17351541
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||| | | ||||||| ||||||| ||||||||||| ||||||||||||||||||| | ||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| |||||| ||||| | ||||||||||||||||| || ||| || |||||||    
T  17351484 aaaacttattccaacgaaaataaaaaaaactatactccaagtttttacgtattagttt 17351541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 43454484 - 43454335
Alignment:
Q  66 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 165  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| | | ||||||||||  |||||||||||||||||||| |||||||||||    
T  43454484 tctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctataaaa 43454385  T
Q  166 ctttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||| |  ||||||||||||||||||||||| | ||| |||||||||||||    
T  43454384 cttatgacaaagaaaacacaaaaaactatatttcaagttcttatgtttta 43454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 5984280 - 5984126
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat-------gaaaattgtttttacatc 154  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||| || |||||||||| |||||       |||||||||||||||||     
T  5984280 ttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaatagtcaatgaaaattgtttttacata 5984181  T
Q  155 ttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttat 209  Q
    || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  5984180 tttctataaaacttattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 12912449 - 12912303
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||| ||||| |||| |||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 12912350  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||||||| ||||| | | |||||||||||||    
T  12912349 tcaaagataacacaaaaaactatattccaactac-tatgttttagttt 12912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 32017700 - 32017809
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  32017700 ttattctcataaaattaaatgcaaattacattcaactttctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatcttcctat 32017798  T
Q  162 aaaactttttc 172  Q
    ||||| |||||    
T  32017799 aaaacgttttc 32017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 67 - 215
Target Start/End: Complemental strand, 42104408 - 42104262
Alignment:
Q  67 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac 166  Q
    ||||| |||||||||||||| ||||||||||||| ||  |||| |||||| |||||||  |||||||||||||||||||||||||||||||| || ||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaac 42104309  T
Q  167 tttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    || ||||||||| |||||  |||| ||||||||||||||||||||||||    
T  42104308 ttgttccaaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 41625675 - 41625520
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| ||||||||| ||||||||||| ||||||| || |||| ||||||||| |||| ||||||| |||||||||  |||||||||||||||||    
T  41625675 ttattttcatgaaattaaattcaaattacatttaattttccctctcttccattttttc-ataatcaatagcgaatgaaaataatttttacatcttcctat 41625577  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| || ||||||||||||||||||||||| |  ||||||||||||||||||||    
T  41625576 gaaacttatttcaaagaaaacacaaaaaactata-tttaaattcttatgttttagttt 41625520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 9957581 - 9957488
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcc 158  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9957581 ttattctcataaaattaaatgcaaattacattcaactttctct--ctttcattttttc-ataaccaatagccaatgaaaattgtttttacatcttcc 9957488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 104386 - 104260
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaattttctctttct--------ttcattttttccataaccaatagccaatgaaaattgtttttacatc 154  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||| |||||| |||||| |||||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctctctctctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatc 104287  T
Q  155 ttcctataaaactttttccaaagaaaa 181  Q
    || |||||||||||||| |||| ||||    
T  104286 tttctataaaacttttttcaaaaaaaa 104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 23233445 - 23233561
Alignment:
Q  100 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactcc 199  Q
    ||||| ||||||||||| ||||||||||||||  ||| |||| ||||||||||| ||||||||||  | ||| ||||||||||||||||||||||||  |    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacacaaaaaactatacgtc 23233544  T
Q  200 aaattcttatgttttag 216  Q
    |||||||||||||||||    
T  23233545 aaattcttatgttttag 23233561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 12792903 - 12792794
Alignment:
Q  100 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactcc 199  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||         ||||||||||||||||||||||||||    
T  12792903 tctctctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaa---------aaagaaaacacaaaaaactatactcc 12792814  T
Q  200 aaattcttatgttttagttt 219  Q
    || |||||||||||||||||    
T  12792813 aatttcttatgttttagttt 12792794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 10154083 - 10153987
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || || ||||||| |||||||||||||||||||||||||||||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 12730001 - 12729892
Alignment:
Q  100 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactcc 199  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||         |||||||||||||||||||||||||    
T  12730001 tctctctctctcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12729912  T
Q  200 aaattcttatgttttagttt 219  Q
    || |||||||||||||||||    
T  12729911 aatttcttatgttttagttt 12729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 5369186 - 5369064
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | ||||||||   | || ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  5369186 aaaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 5369087  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
      ||| | |||||||||||||||    
T  5369086 ttaaaaataacacaaaaaactat 5369064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 3463970 - 3463853
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| ||||||||||||||||| ||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatt 3463871  T
Q  172 ccaaagaaaacacaaaaa 189  Q
     |||||| ||||||||||    
T  3463870 tcaaagataacacaaaaa 3463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 7071234 - 7071342
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| ||||||||||||||||||| |  |||| |||||| ||| ||| |||||| ||||||||||| ||||||||| |||| ||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccat 7071333  T
Q  162 aaaactttt 170  Q
     ||||||||    
T  7071334 gaaactttt 7071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 16153500 - 16153354
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||| |||| | |||| ||||| |||| | ||||| ||| || |||| |||   ||||||||||| ||||||||||||||||||||||||| ||    
T  16153500 aaaattaaatacaaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat-gtttttacatcttcctataaaacttatt 16153402  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||||||  | |||| | ||||||||||||||    
T  16153401 tcaaagataacacaaaaaactatgttacaaactattatgttttagttt 16153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 8959646 - 8959767
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | | |||||||| |||| | || |||||| || |||| |||    |||||||||||||||||||||||||||||||||||| ||    
T  8959646 aaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 8959745  T
Q  172 ccaaagaaaacacaaaaaacta 193  Q
     |||||| ||||||||||||||    
T  8959746 tcaaagataacacaaaaaacta 8959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 8506443 - 8506584
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||      |||||||||||||||||||||||| ||||||||||| ||    
T  8506443 aaaattaaatgcaaagtgcattcaatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatctttctataaaacttatt 8506536  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || |||| || |||||||  | |||| |  |||||||||||||    
T  8506537 tcaaggataacataagaaactatgttgcaaactactatgttttagttt 8506584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 24439575 - 24439699
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| |||||||||||||  | |||||||||| ||||||||||||||||| | || |||||| |    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctttccatgaaacttat 24439674  T
Q  171 tccaaagaaaacacaaaaaactata 195  Q
    |||||  | ||||||||||| ||||    
T  24439675 tccaagaataacacaaaaaattata 24439699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 32019911 - 32019974
Alignment:
Q  156 tcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  32019911 tcctataagacgttttctaaagaaaacacagaaaactatactccaaattcttatgttttagttt 32019974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 8146730 - 8146860
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||||||||||||||| | ||||| ||||  || ||||||| ||||||||  ||| ||||||||||||  ||||| || || | ||||||||| |||    
T  8146730 aaattaaatgcaaattacaattaatttgctctccctctcattttctccataacagataaccaatgaaaatttattttaaatttttccataaaacttattc 8146829  T
Q  173 caaagaaaacacaaaaaactatactccaaatt 204  Q
    || | | ||||||| |||||||||||||||||    
T  8146830 caga-agaacacaagaaactatactccaaatt 8146860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 5736395 - 5736273
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | | |||||||| ||||  |||||||||| ||  ||| |||   | ||||||||||||||||||| |||||||||||| || ||    
T  5736395 aaaattaaatgcaaaatgcgttcaatttgctctccctttcattttctctgtaatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatt 5736296  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||| ||||||||||    
T  5736295 tcaaagataacataaaaaactat 5736273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 12730145 - 12730103
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctct 104  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12730145 ttattctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 12638892 - 12639017
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | |||||| || |    
T  12638892 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 12638991  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  12638992 tccaaggagaacacaaaaaattatac 12639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 31690776 - 31690651
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| ||||||||||  |    
T  31690776 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttctataaaactcat 31690677  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||  | ||||||||||| |||||    
T  31690676 tccaagaagaacacaaaaaattatac 31690651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 30893365 - 30893258
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||| || ||||| |||| ||||| |||||| |||||||||||| | |||||| |  ||| ||  ||||||||| ||||||||||||||||| | ||||    
T  30893365 attttatctataacaaataaccaataaaaattatttttacatctttccataaaattaattctaagaaaaacacaagaaactatactccaaattatcatgt 30893266  T
Q  212 tttagttt 219  Q
    ||||||||    
T  30893265 tttagttt 30893258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 1144586 - 1144524
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 194  Q
    |||||||||||||||||||||| ||||||||||| || ||  ||||| |||||||||||||||    
T  1144586 ccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactat 1144524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 32079512 - 32079657
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| ||  |||  ||||  | |||||||||||||||||||||| | || |||||  ||     
T  32079512 aaattaaatgcaaattgcatttaattt-ctctccctctcattttctctgtaataaataatcgatgaaaattgtttttacatctttccattaaactaattt 32079610  T
Q  173 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||| || |||| ||||||||||| |||||||| | ||||||||||||    
T  32079611 caaggagaacataaaaaactataatccaaattataatgttttagttt 32079657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 6391876 - 6391997
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||| |||||||| |||| | | | || | ||||||||||| || ||||| |||| ||||| ||| ||||||||||||||| |||| |||||| ||     
T  6391876 aaattaattgcaaattgcatttattatactttctctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttattt 6391975  T
Q  173 caaagaaaacacaaaaaactat 194  Q
    ||||||  | ||||||||||||    
T  6391976 caaagatgatacaaaaaactat 6391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 9957491 - 9957443
Alignment:
Q  170 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9957491 ttccaaagaaaacacaaaaa-ctatactccaaattctcatgttttagttt 9957443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 12792966 - 12792929
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattt 99  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12792966 ttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 13146732 - 13146857
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||| ||||| ||||||||||  |||   |||  |||| |||||||    || ||||||| |||| |||||||||||| | ||||||||| |    
T  13146732 taaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctttccataaaacttat 13146831  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||||| ||||||||||| |||||    
T  13146832 tccaaagagaacacaaaaaattatac 13146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 28907074 - 28907192
Alignment:
Q  72 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| |||||| ||||||     
T  28907074 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 28907171  T
Q  170 ttccaaagaaaacacaaaaaa 190  Q
    || |||||| |||||||||||    
T  28907172 tttcaaagataacacaaaaaa 28907192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 28943469 - 28943587
Alignment:
Q  72 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| |||||| ||||||     
T  28943469 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 28943566  T
Q  170 ttccaaagaaaacacaaaaaa 190  Q
    || |||||| |||||||||||    
T  28943567 tttcaaagataacacaaaaaa 28943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 29307282 - 29307221
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaacta 193  Q
    |||||||||||| |||||||||||||||||||||||| ||  |||||  |||||||||||||    
T  29307282 ccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaacta 29307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 842780 - 842698
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaaga--nnnnnnnnngttattctcataaaattaaatgcaaattacatt 93  Q
    ||||||||||||||||| |||||||||||||||||||||            ||||||||||||||||||||||||||||||||    
T  842780 aatataagcaaaaaagataaacttttatcttttccaagatttttttttttattattctcataaaattaaatgcaaattacatt 842698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 5659676 - 5659584
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctct-ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 163  Q
    ||||||||||| ||| | |||||||||| || | || |||||||||||| |||| |||   ||||| ||||||||||||||||||||||||||    
T  5659676 aaaattaaatgtaaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 30703641 - 30703725
Alignment:
Q  106 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaa 190  Q
    ||||||||||| |  |||| ||||| ||||||||| || ||| ||||||||||||||||| || || |||||| |||||||||||    
T  30703641 tctttcattttctgaataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaa 30703725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 8146169 - 8146044
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  ||| | ||| ||||| |||||||    || | ||||| |||| |||||||||||| | || |||||| |    
T  8146169 taaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttat 8146070  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    | ||| || ||||||||||| |||||    
T  8146069 ttcaaggagaacacaaaaaattatac 8146044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 29493669 - 29493525
Alignment:
Q  70 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    |||||||| ||||||||||| ||||||||| | || |||   ||||| |||||||||||||  |||| |||||||||| ||| | ||  | | |||||      
T  29493669 ataaaattgaatgcaaattatattcaatttacactctctcctattttctccataaccaataatcaataaaaattgtttatacttatttgtgtgaaactaa 29493570  T
Q  170 ttccaaagaaaacacaaaaaactatactccaaattcttatgtttt 214  Q
    |||  |  | |||||||||| |||||||||||||| |||||||||    
T  29493569 ttcagagcagaacacaaaaagctatactccaaattattatgtttt 29493525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 446054 - 446000
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt 116  Q
    ||||| |||| |||||||||| ||||| ||||||||||| ||| |||||||||||    
T  446054 ttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcatttt 446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 1238522 - 1238596
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat 136  Q
    ||||||| |||||||||||  |||||||||||||||||||| | ||   |||||| || ||||||||||| ||||    
T  1238522 ttattcttataaaattaaaaacaaattacattcaattttctttctcccccattttctctataaccaataggcaat 1238596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 9957661 - 9957631
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  9957661 aatataagcaaaaaagacaaacttttatctt 9957631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 20643930 - 20643960
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  20643930 aatataagcaaaaaagacaaacttttatctt 20643960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 23233395 - 23233429
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaa 96  Q
    |||||||||||||| ||||||||||||||||||||    
T  23233395 ttattctcataaaaataaatgcaaattacattcaa 23233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 8143937 - 8144081
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||  ||||| ||||||||||  |||   ||| ||||| ||||||| || || ||||||| ||||  |||||| |||| |||| |||||| |    
T  8143937 taaaattaaatataaattgcattcaatttgttctacattttattttctccataatcattaaccaatgagaattcgttttacttctttctatgaaacttat 8144036  T
Q  171 tccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||  |||| |||||||  |||||  ||||||  |||||||||    
T  8144037 tccaagaaaaatacaaaaatttatacctcaaattaatatgtttta 8144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 8225379 - 8225407
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  8225379 aatataagcaaaaaagacaaacttttatc 8225407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 16286178 - 16286114
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| ||||||||||||   || |||||| ||||||||| ||||||||||| |||||    
T  16286178 ccaatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaaattatac 16286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 99
Target Start/End: Complemental strand, 17825354 - 17825326
Alignment:
Q  71 taaaattaaatgcaaattacattcaattt 99  Q
    |||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaattt 17825326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 24432495 - 24432431
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | || |||||| |||||| || ||||||||||| |||||    
T  24432495 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatac 24432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 25962543 - 25962479
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | || |||||| |||||| || ||||||||||| |||||    
T  25962543 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatac 25962479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 31316896 - 31316832
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | || |||||| |||||| || ||||||||||| |||||    
T  31316896 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatac 31316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 34425246 - 34425274
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  34425246 aatataagcaaaaaagacaaacttttatc 34425274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 42273565 - 42273593
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  42273565 aatataagcaaaaaagacaaacttttatc 42273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 160; Significance: 5e-85; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 787 - 581
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  787 aatataagcaaaaaacacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttatctttctttca 688  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  687 ttttttccataaccaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacataaaactatactccaaattcttatgtt 588  T
Q  213 ttagttt 219  Q
    |||||||    
T  587 ttagttt 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 5e-85; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 7022618 - 7022412
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||||||||||||||| |||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7022618 aatataagcaaaaaagacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 7022519  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  7022518 ttttttccataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtt 7022419  T
Q  213 ttagttt 219  Q
    |||||||    
T  7022418 ttagttt 7022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 34890340 - 34890183
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34890340 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34890240 aaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 34890183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 7858473 - 7858679
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  7858473 aatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattactttcaattttctctctctttca 7858572  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  7858573 ttttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaactatactccaaattcttatgtt 7858672  T
Q  213 ttagttt 219  Q
    |||||||    
T  7858673 ttagttt 7858679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 36190766 - 36190923
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36190766 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  36190866 aaaacttttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttt 36190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 26483478 - 26483683
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| |||||| |||||||||||| |||| |||||         ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  26483478 aatataag-aaaaaacacaaacttttatttttttcaagatttttttttgttattctcgtaaaattaaatgtaaattacattcaattttctctttctttca 26483576  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26483577 ttttttccataatcaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgtt 26483676  T
Q  213 ttagttt 219  Q
    |||||||    
T  26483677 ttagttt 26483683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 43216513 - 43216356
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  43216513 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctat 43216414  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43216413 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 43216356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 31734109 - 31734255
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  31734109 ttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctat 31734208  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  31734209 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 62 - 214
Target Start/End: Original strand, 28348605 - 28348756
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  28348605 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacatattcctat 28348703  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttt 214  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  28348704 aaaactttttccaaagaaaatacaaaatactatactccaaattcttatgtttt 28348756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 24892832 - 24892992
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt---ttacatcttcc 158  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||   ||| ||| |||    
T  24892832 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcctcc 24892931  T
Q  159 tataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  24892932 tataaaacgttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttt 24892992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 15958079 - 15957920
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttct--ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  15958079 ttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcct 15957980  T
Q  160 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||||    
T  15957979 ataaaacttttttcaaagaaaacacaataaactatactccaatttcttatattttagttt 15957920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 8711870 - 8712011
Alignment:
Q  62 ttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8711870 ttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttccta 8711969  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaat 203  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  8711970 taaaactttttccaaa-aaaacacaaaaaactatactccaaat 8712011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 41086602 - 41086395
Alignment:
Q  13 aatataagcaaaaaa-gacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    ||||||||||||||| |||||||||||||||||| |||||          |||||||||||||||||||||||||||||||| |||||||||| | |||     
T  41086602 aatataagcaaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattgaattttctctctgtttt 41086503  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| ||||      
T  41086502 attttttccattaccaatagccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaactataattcaaatttttatta 41086403  T
Q  212 tttagttt 219  Q
    ||||||||    
T  41086402 tttagttt 41086395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 13143758 - 13143904
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  13143758 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctat 13143857  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
     ||||||||| ||| |||||||||||||| |||||| ||||||||||    
T  13143858 gaaacttttttcaacgaaaacacaaaaaattatacttcaaattctta 13143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 34158457 - 34158303
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  34158457 ttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctat 34158358  T
Q  162 aaaact-ttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||| ||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  34158357 aaaacttttttttaaagaaaacacaacaaactatactccagattcttatgtttta 34158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 35456190 - 35456038
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  35456190 ttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctat 35456091  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||||||| |||| |||||| ||||||||||||| |||||||||||||||||    
T  35456090 aaaacttttt-caaaaaaaacataaaaaactatacttcaaattcttatgtttta 35456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 8107783 - 8107630
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |  | |    
T  8107783 ttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttatccataaccaatagccaatgaaaattgtttttacatcatattgt 8107685  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgtttta 215  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| |||||    
T  8107684 aaaacttttttcaaagaaaatacaaaaaaactatactccaaattcttatatttta 8107630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 30575987 - 30575843
Alignment:
Q  76 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat-aaaactttttcca 174  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||  |    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttttttta 30575888  T
Q  175 aagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  30575887 aagaaaacacaaaaaactttactccaaatttttatgttttagttt 30575843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 35525603 - 35525736
Alignment:
Q  84 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaaca 183  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaaca 35525702  T
Q  184 caaaaaactatactccaaattcttatgttttagttt 219  Q
    |  |||||||||||| ||||||||||||||||||||    
T  35525703 c--aaaactatactctaaattcttatgttttagttt 35525736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 8709950 - 8709795
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||  ||||| ||||||||  |||| ||||||||| ||||||||| |||||| ||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctct--cttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     | |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  8709852 gagacttatttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 8709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 29920434 - 29920277
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| | ||||||||||||||||| || ||||  ||||| ||||||| ||||||||||||||||||||||||||||||||| ||    
T  29920434 ttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccat 29920335  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||| ||||||||||| | |||| |||||||||||||||||||||    
T  29920334 gaaacttattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttt 29920277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 13144073 - 13143954
Alignment:
Q  100 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact-ttttccaaagaaaacacaaaaaactatactc 198  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  13144073 tctctctctttcattttt-ccataaccaataactaatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactc 13143975  T
Q  199 caaattcttatgttttagttt 219  Q
    |||||||||||||||||||||    
T  13143974 caaattcttatgttttagttt 13143954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 15824797 - 15824646
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||| |||||||| |||||||||||||||||      |||||||||||||| | ||    
T  15824797 ttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaat------tgtttttacatctttccat 15824704  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  15824703 gaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 15824646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 16879558 - 16879401
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| || ||||||||| |||| ||||||||||||||||| |||||||||||  |||||| |||||| |||| |||||||||||||||| |||| ||    
T  16879558 ttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcccat 16879459  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || || |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  16879458 gaaatttatttcaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 16879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 4047060 - 4046912
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||| || | ||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  162 aaaactttttccaaagaaaacaca-aaaaactatactccaaattcttat 209  Q
     |||||| ||  |||||||||||| ||||||||| || |||||||||||    
T  4046960 gaaacttattataaagaaaacacacaaaaactatgctacaaattcttat 4046912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 7499720 - 7499816
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-ttttttccataaccaatagccaatgaaaattgtttttacatcttc 157  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7499720 ttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttc 7499816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 3642130 - 3642039
Alignment:
Q  67 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 159  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 2052830 - 2052937
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||  |||  ||||| ||| || |||||||||||||||||||||||||||||||||| ||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctct--cttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  162 aaaacttttt 171  Q
    ||||||||||    
T  2052928 aaaacttttt 2052937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 16358240 - 16358125
Alignment:
Q  99 ttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactc 198  Q
    |||||| ||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||     
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaacttttt-caaagaaaacaaaaaaaactatactt 16358142  T
Q  199 caaattcttatgtttta 215  Q
    |||||| |||| |||||    
T  16358141 caaatttttatatttta 16358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 17713227 - 17713374
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||| | |||| |||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| ||    
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatt 17713326  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  17713327 tcaaggataacacaagaaactatgttgcaaaatactatgttttagttt 17713374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 8673385 - 8673507
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| |||||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatt 8673484  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||| | |||||||||||||||    
T  8673485 tcaaatataacacaaaaaactat 8673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 26954548 - 26954441
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||| ||| || | ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  26954548 aaaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 26954449  T
Q  172 ccaaagaa 179  Q
     |||||||    
T  26954448 tcaaagaa 26954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 41362463 - 41362316
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||| ||||| |||  | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  41362463 aaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 41362364  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||||||  | |||| |  |||||||||||||    
T  41362363 tcaaagataacacaaaaaactatgttacaaactactatgttttagttt 41362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 2628320 - 2628198
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||| |||||||| |  ||||||||| |||| ||||||||||| || |||| ||||| |||||||||||| |||||||||||||||||||||||| ||    
T  2628320 aaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 2628221  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
      || || ||||||| |||||||    
T  2628220 ttaaggataacacaagaaactat 2628198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 25195202 - 25195085
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||| || ||    
T  25195202 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatt 25195104  T
Q  172 ccaaagaaaacacaaaaaa 190  Q
     |||||| |||||||||||    
T  25195103 tcaaagataacacaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 44663953 - 44663801
Alignment:
Q  64 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 163  Q
    |||||| | |||||||| |||||| | |||||| ||| ||  | ||||||||| ||| ||| ||||||||||| |||||| |||||||||||| | ||||    
T  44663953 attctcgtgaaattaaacgcaaatcatattcaactttatccgtttttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataa 44663854  T
Q  164 aactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    || || |||||||||||||||   ||||||||||| ||||||||||  ||||||||    
T  44663853 aatttattccaaagaaaacac---aaactatactctaaattcttataatttagttt 44663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 8745587 - 8745734
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| ||  || ||||| ||||  |||| |||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||| ||    
T  8745587 aaaattaaatgcaaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 8745686  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||  | ||||||| |||||||  | |||| |  |||||||||||||    
T  8745687 tcaagaataacacaagaaactatgttgcaaactactatgttttagttt 8745734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 17336746 - 17336868
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||  || |||| |||   |||||||||||||||||||||||||||||||||| || ||    
T  17336746 aaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatt 17336845  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||||||  ||||||||||||||    
T  17336846 tcaaagatgacacaaaaaactat 17336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 41755920 - 41756041
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| |||||  ||||||| ||| ||||||||| || ||||    
T  41755920 ttattatcatgaaattaaatgtaaattacattcaattttttctctctttca-tttttccataagcaataatcaatgaacattatttttacatttttctat 41756018  T
Q  162 aaaactt-tttccaaagaaaaca 183  Q
    |||| || |||| ||||||||||    
T  41756019 aaaatttatttcaaaagaaaaca 41756041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 38072169 - 38072314
Alignment:
Q  74 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttcc 173  Q
    |||||||| |||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||| ||  ||||||||||  | |    
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattc 38072268  T
Q  174 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| |||||||||||||||  | |||| |  |||||||||||||    
T  38072269 aaagataacacaaaaaactatgttacaaactactatgttttagttt 38072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 4039037 - 4038920
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||| |||||||||| ||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatt 4038938  T
Q  172 ccaaagaaaacacaaaaa 189  Q
     |||| | ||||||||||    
T  4038937 tcaaaaataacacaaaaa 4038920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 5217397 - 5217517
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||||||||| || |||||| | | || | ||||||||||| || ||||| |||| ||||| ||||||||||||||||||| |||| |||||| ||     
T  5217397 aaattaaatgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttattt 5217496  T
Q  173 caaagaaaacacaaaaaacta 193  Q
    ||| || ||||||| ||||||    
T  5217497 caaggataacacaagaaacta 5217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 4480841 - 4480911
Alignment:
Q  134 aatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 204  Q
    |||||||||| |||||||||||||| ||||||||| ||  ||||| |||||||||| ||||||||||||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctatactccaaatt 4480911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 8712577 - 8712675
Alignment:
Q  121 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| |||| ||||| ||||||||||||||||||| ||||||||||| ||||||  | ||||||| |||||| ||| ||| ||  |||||||||||||    
T  8712577 ataactaataaccaataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaactaaactgcaagttactatgttttagttt 8712675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 28497253 - 28497172
Alignment:
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 194  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||| ||||||||| || ||| || ||||||| |||||||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactat 28497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 27819663 - 27819759
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||||||| |||||| ||||| ||||  |||| ||||| || ||||||||||  |||| |||| ||||||||||||||  ||||||||||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaactt 27819759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 33563681 - 33563571
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaata--gccaatgaaaattgtttttacatcttc 157  Q
    |||||||||| |||||||| | |||||||||||||| | |||| ||||   |||||| | ||||||||| |  | |||||||||||||||||||||||||    
T  33563681 ttattctcatgaaattaaacgtaaattacattcaatctcctctctcttctccattttctgcataaccaaaatggtcaatgaaaattgtttttacatcttc 33563582  T
Q  158 ctataaaactt 168  Q
    | |||||||||    
T  33563581 ccataaaactt 33563571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 39187237 - 39187353
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | ||||||||| |    
T  39187237 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttat 39187336  T
Q  171 tccaaagaaaacacaaa 187  Q
    ||||| || ||||||||    
T  39187337 tccaacgagaacacaaa 39187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 2052947 - 2053014
Alignment:
Q  152 atcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||||||||| ||| ||||||||||||||||| |||||| | |||| ||||||||||||||    
T  2052947 atcttcccataaaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttt 2053014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 13144127 - 13144085
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctct 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  13144127 ttattttcataaaattaaatgcaaattacattcaattttctct 13144085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 3099957 - 3100082
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  3099957 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 3100056  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  3100057 tccaacgagaacacaaaaaattatac 3100082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 14576301 - 14576213
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact 167  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| |       ||||| |||||||||||| |||||||||||| ||||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttct-------caataaccaatgaaaattatttttacatctttctataaaact 14576213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 24510848 - 24510735
Alignment:
Q  75 attaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttcca 174  Q
    |||||||||||||| ||||||||||  |||   ||| ||| | ||||||| || || ||||| ||||||||||||||||||| | || |||||| |||||    
T  24510848 attaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaataaaaattgtttttacatctttccatgaaacttattcca 24510749  T
Q  175 aagaaaacacaaaa 188  Q
    |  |||||||||||    
T  24510748 ataaaaacacaaaa 24510735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 31133186 - 31133061
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||| |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  31133186 taaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaatttat 31133087  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  31133086 tccaaggagaacacaaaaaattatac 31133061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 34713532 - 34713657
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| ||| ||||||| |    
T  34713532 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctagaaaacttat 34713631  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    | |||  ||||||||||||| |||||    
T  34713632 ttcaagaaaaacacaaaaaattatac 34713657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 44052625 - 44052750
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | | ||||||| |    
T  44052625 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccagaaaacttat 44052724  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  44052725 tccaaggagaacacaaaaaattatac 44052750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 7670749 - 7670813
Alignment:
Q  77 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaa 141  Q
    |||||| ||||||||||||||||||||| | || |||||| |||||||| |||||| ||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 25321743 - 25321618
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| ||||| ||||   ||| ||||| |||||||    || || ||||||||| |||||||||||| | ||||||||| |    
T  25321743 taaaattaaatgcaagttgcatttaatttgctctcctttttattttctccataatttttaacctatgaaaattatttttacatctttccataaaacttat 25321644  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || |||||| |||| |||||    
T  25321643 tccaaggagaacacagaaaattatac 25321618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 34899928 - 34900076
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttc-attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    ||||||||||||| |||| ||||||||||  | |||||||  | ||| ||||| | ||||| ||||| |||||| |||||| ||| |||||||||||||     
T  34899928 taaaattaaatgctaatttcattcaatttgtt-tttctttatactttctccatgatcaataaccaatcaaaattatttttaaatcctcctataaaactta 34900026  T
Q  170 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||| ||    ||||||||||| ||||   |||||| ||||||||||||||    
T  34900027 ttctaagaggaacacaaaaaaatatatcgcaaattattatgttttagttt 34900076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 17314834 - 17314981
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||| |||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||||||| |||||||| ||| ||| ||| || ||    
T  17314834 aaaattaaatccaaagtgcattcaatttgctctccttttcattttctctataatcaactaccaatgaaaattgcttttacattttcgtatgaaatttatt 17314933  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||||||  ||||||||| ||||  | |||| |  |||||||||||||    
T  17314934 tcaaagatgacacaaaaagctatgttacaaactactatgttttagttt 17314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 40773499 - 40773412
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| |||||| |||||||||||||   |||||||| |||  |  |||||||| |||| ||||||||||||| |||| |||||||||    
T  40773499 ccaataaaaattatttttacatcttctgttaaaacttattcttagaaaaacacacaaaattatactccaaattgttatattttagttt 40773412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 45190700 - 45190735
Alignment:
Q  184 caaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttt 45190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 14693434 - 14693484
Alignment:
Q  133 caatgaaaattgtttttacatcttcctataaaactttttccaaagaaaaca 183  Q
    ||||||||||||||||||||||||| ||||||| || || |||||| ||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaatttatttcaaagataaca 14693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 34890420 - 34890390
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  34890420 aatataagcaaaaaagacaaacttttatctt 34890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 374162 - 374103
Alignment:
Q  86 attacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt 147  Q
    ||||||||||||||| | ||||||||||||| ||||||| |||||| |||| ||||||||||    
T  374162 attacattcaatttttt-tttctttcattttctccataatcaatagacaat-aaaattgttt 374103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 6401679 - 6401756
Alignment:
Q  127 aatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 204  Q
    |||| |||||| ||||||||||||||||||  ||  |||||| || |||  | |||||||||||||||||| ||||||    
T  6401679 aataaccaatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaatt 6401756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 11158675 - 11158712
Alignment:
Q  182 cacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttt 11158712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 27752590 - 27752715
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  27752590 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 27752689  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  27752690 tccaaggagaacacaaaaaattatac 27752715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 13144207 - 13144179
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  13144207 aatataagcaaaaaagacaaacttttatc 13144179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 24892752 - 24892780
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  24892752 aatataagcaaaaaagacaaacttttatc 24892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 29147393 - 29147297
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||||||| | |||| |||||  |||   ||||||||| || |||| ||| | | |||||||||||||||| ||||||| ||| ||||||    
T  29147393 aaaattaaatgcaaactgcatttaatttgatctccatttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaactt 29147297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 33851117 - 33851061
Alignment:
Q  134 aatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaa 190  Q
    ||||| |||| |||||||||||| | || |||||| ||||||||| |||||||||||    
T  33851117 aatgagaattatttttacatctttccatgaaacttattccaaagagaacacaaaaaa 33851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 3e-83; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 28599362 - 28599155
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    ||||||| |||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28599362 aatataatcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatattacattcaattttctctttctttc 28599263  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28599262 attttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactatactccaaattcttatgt 28599163  T
Q  212 tttagttt 219  Q
    ||||||||    
T  28599162 tttagttt 28599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 35517069 - 35517276
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnn-gttattctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    ||||||||||||||||||||||||||||||||| |||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35517069 aatataagcaaaaaagacaaacttttatctttttcaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttc 35517168  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35517169 attttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 35517268  T
Q  212 tttagttt 219  Q
    ||||||||    
T  35517269 tttagttt 35517276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 6110414 - 6110206
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct--tt 110  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| |||  ||    
T  6110414 aatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctcttt 6110315  T
Q  111 cattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  6110314 cattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaagctatactccaaattcttatg 6110215  T
Q  211 ttttagttt 219  Q
    |||||||||    
T  6110214 ttttagttt 6110206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 45085204 - 45085406
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||| |||||||||||||||| ||||          ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45085204 aatataagcaaaaaagataaacttttatcttttctaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttca 45085303  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  45085304 ttttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatgtt 45085403  T
Q  213 tta 215  Q
    |||    
T  45085404 tta 45085406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 41528203 - 41528404
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||||||||||||||| |||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41528203 aatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttca 41528302  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||| ||||||||||||||    
T  41528303 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaactatacttcaaattcttatgtt 41528402  T
Q  213 tt 214  Q
    ||    
T  41528403 tt 41528404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 3201322 - 3201479
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3201322 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 3201421  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  3201422 aaaactttttccaaagaaaacacaaaaaactatactttaaattcttatgttttagttt 3201479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 19264095 - 19264253
Alignment:
Q  62 ttattctcataaaattaaatgcaaa-ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19264095 ttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttccta 19264194  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19264195 taaaactttttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttt 19264253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 45660361 - 45660521
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45660361 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 45660460  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaa---attcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||    
T  45660461 aaaacttttttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttt 45660521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 11617020 - 11617173
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  11617020 ttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  11617120 aaaacttttttcaaagaaaataccaaaaactatactccaaattcttatgtttta 11617173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 33198795 - 33198638
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  33198795 ttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctat 33198696  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||  |||||||||||||||||||| | ||||||||||||| |||||||||    
T  33198695 aaaacttcttttaaagaaaacacaaaaaactagagtccaaattcttatattttagttt 33198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 28858305 - 28858465
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||| ||||    
T  28858305 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctat 28858404  T
Q  162 aaaactttttccaaagaaaacacaaaaaacta---tactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||||   || |  ||||||||||||||||||||    
T  28858405 aaaacttttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttt 28858465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 29524205 - 29524048
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||||||| ||| || |||||||||||| ||||||||    
T  29524105 gaaacttattccaaagaaaacacaaaaaattatgctacaaattcttatgctttagttt 29524048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 14873958 - 14874105
Alignment:
Q  62 ttattctcataaaattaaa-tgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14873958 ttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttccta 14874057  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  14874058 taaaacttttttcaaagaaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 12938238 - 12938395
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||  ||| ||| ||||| ||||| ||||||| |||||||||||||||||||||||||||  |||||||    
T  12938238 ttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctat 12938337  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  12938338 aaaacttatttcaaagaaagcacaaaaaactatactccaaattcttatgttttagttt 12938395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 25572042 - 25572198
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  25572042 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttcccat 25572140  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  25572141 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 25572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 369 - 484
Target Start/End: Complemental strand, 23690388 - 23690274
Alignment:
Q  369 atgtgttcacttttactagccacacacaaattcgttagttcatctatgtaatggattctcttcaacttactaatgaacaaaagcaattggcttcaagaga 468  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23690388 atgtgtccacttttactagccacacacaaattcgttagttcatctatgtaatggattctcttcaacttactaatgaacaaaagcaa-tggcttcaagaga 23690290  T
Q  469 gagaaggaaaaaagtg 484  Q
    ||||||||||||||||    
T  23690289 gagaaggaaaaaagtg 23690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 219
Target Start/End: Original strand, 8701601 - 8701755
Alignment:
Q  65 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaa 164  Q
    ||||||| ||||||||| |||||| |||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaa 8701700  T
Q  165 actttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||| |||||||||||||| |||||||||| || |||||| ||||||||||||||    
T  8701701 acttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttt 8701755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 24204693 - 24204536
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| | |||||||| |||||| |||||||||||||| |||| |||||| | ||||||||||||||||||||||||| |||||||| |||||||    
T  24204693 ttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctat 24204594  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  24204593 aaaacttattccaaagaaaacacaataaattatactccaaattcttaggttttagttt 24204536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 9864881 - 9864725
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||||||| |||  ||| |||||| ||||||| |||| ||||||||||||||||||||| |||||| ||    
T  9864881 ttattctcatgaaattaaatgcaaattacattcaattttatct--cttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccat 9864784  T
Q  162 aaaactttttccaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9864783 gaaacttattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttt 9864725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 6766098 - 6765944
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt-ccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  6766098 ttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttccta 6765999  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||||| || |||||| ||||||| ||||||||||||| |||||| ||||||||||    
T  6765998 taaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgtttta 6765944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 23690683 - 23690582
Alignment:
Q  268 ttgtaccatttcatggggaaatgtcaa-gttaacattgcttctactttatcaaatccaaaattttggatattatgtactttgaatacaacaggaaaacaa 366  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23690683 ttgtaccatttcatggggaaatgtcaaagttaacattgcttctactttatcaaatccaaaattttggatattatgtactttgaatacaacaggaaaacaa 23690584  T
Q  367 at 368  Q
    ||    
T  23690583 at 23690582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 40584562 - 40584436
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||    
T  40584562 ttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccat 40584463  T
Q  162 aaaactttttccaaagaaaacacaaaa 188  Q
    ||||||| ||| |||||||||||||||    
T  40584462 aaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 5963197 - 5963353
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||| |||||| |||||||||| ||| ||    
T  5963197 ttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tcccat 5963295  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||| ||||||||||||||||| || |||| |||||||||| |||||||||    
T  5963296 aaaacttattctaaagaaaacacaaaaaattagactctaaattcttatattttagttt 5963353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 33677479 - 33677636
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||| ||| |||||||||||||| | ||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  33677479 ttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 33677578  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||  |  ||| |||||| |||||||||| || |||||| ||||||||||||||    
T  33677579 aaaacttagtaaaaaaaaaacataaaaaactattcttcaaatttttatgttttagttt 33677636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 7645394 - 7645234
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt---cattttttccataaccaatagccaatgaaaattgtttttacatcttcc 158  Q
    |||||||||| |||||||||||||||||||||||||||||||| |  ||   |||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  7645394 ttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgttcc 7645295  T
Q  159 tataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     || ||| || ||| || |||||||||||| | ||||||||||||||||||||||||||||    
T  7645294 catgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgttttagttt 7645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 35022897 - 35023051
Alignment:
Q  66 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaata--gccaatgaaaattgtttttacatcttcctataa 163  Q
    |||||| ||||||||||||||||  |||||||||||||| |||  |||||| ||| ||| |||||  || |||||||||||||||||||||||||||| |    
T  35022897 tctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatga 35022996  T
Q  164 aactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35022997 aacttactccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttt 35023051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 35115943 - 35115811
Alignment:
Q  87 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt-tttccaaagaaaacaca 185  Q
    ||||||||||||||| || |||| |||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||   ||| ||||||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacaca 35115844  T
Q  186 aaaaactatactccaaattcttatgttttagtt 218  Q
    |||||||||||||||||||||||||||||||||    
T  35115843 aaaaactatactccaaattcttatgttttagtt 35115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 44454987 - 44455142
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||||||||||  || |||| |||||| || |||| ||||||||||||  |||| ||||||| | |||| ||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatg--aattttttttacgttttcccat 44455084  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||| ||| |||||||||||||||||||||||||||| ||| |||||||||    
T  44455085 gaaacttattcaaaataaaacacaaaaaactatactccaaattcatatattttagttt 44455142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 40808853 - 40808727
Alignment:
Q  90 cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 189  Q
    |||| ||||||||||  |||| ||||||||| |||||||| || ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  40808853 catttaattttctct--cttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaa 40808757  T
Q  190 actatactccaaattcttatgttttagttt 219  Q
    ||||| || |||||||||||| ||||||||    
T  40808756 actatgctacaaattcttatgctttagttt 40808727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 30830760 - 30830607
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | ||||||||| || |||| ||||| ||||||||| || |||||| ||||||  ||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcat 30830661  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
     |||||| || |||| ||||||||||||   ||||||||| |||||||||||||    
T  30830660 gaaacttatttcaaaaaaaacacaaaaagacatactccaatttcttatgtttta 30830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 43415468 - 43415554
Alignment:
Q  133 caatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||| |||||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 43415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 26998323 - 26998445
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  26998323 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 26998422  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
      ||||| |||||||||||||||    
T  26998423 ttaaagataacacaaaaaactat 26998445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 195
Target Start/End: Original strand, 32010108 - 32010231
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||| ||||| |||| | ||||||||| || |||| |||   |||||||||||| |||||||||||||||||||||||| ||    
T  32010108 aaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 32010207  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
     |||||| ||||||||||||||||    
T  32010208 tcaaagataacacaaaaaactata 32010231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 32273677 - 32273799
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||| ||||||||||||||||| ||    
T  32273677 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatt 32273776  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  32273777 tcaaagataacacaaaaaactat 32273799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 30421346 - 30421237
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  | ||  ||||  | || |||||||||||||||||||| |||    
T  30421346 ttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatcttcttat 30421247  T
Q  162 aaaacttttt 171  Q
    ||||||||||    
T  30421246 aaaacttttt 30421237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 64 - 203
Target Start/End: Original strand, 4707419 - 4707558
Alignment:
Q  64 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 163  Q
    |||||| |||||||||||| ||||| |||||||| | ||| | || || ||||||| || |  |||| ||||||||||||||||| |||||||||  | |    
T  4707419 attctcgtaaaattaaatgtaaattgcattcaatgtgctcctcctctccttttttctatgatgaataaccaatgaaaattgttttaacatcttcccgtta 4707518  T
Q  164 aactttttccaaagaaaacacaaaaaactatactccaaat 203  Q
    ||||| ||| || |||||||||||||||||||||||||||    
T  4707519 aacttattctaaggaaaacacaaaaaactatactccaaat 4707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 9709526 - 9709641
Alignment:
Q  79 aatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaga 178  Q
    |||||||||| ||||||||||  ||| ||||||||||| || |||| ||||| | ||||||||||||||| ||||||||||||||||||| || ||| ||    
T  9709526 aatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaagga 9709625  T
Q  179 aaacacaaaaaactat 194  Q
     ||||||| |||||||    
T  9709626 taacacaagaaactat 9709641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 38071002 - 38071123
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||| |||||||| ||    
T  38071002 aaaattaaatgtaaagtgcattcaatttgctctat-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatt 38071100  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  38071101 tcaaagataacacaaaaaactat 38071123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 39696963 - 39696877
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttt 148  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||| |||||| || || | ||||||| |||||||||||||||    
T  39696963 ttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 4891793 - 4891675
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||||||| | |||| | ||||||||| |  |||| |||   ||||| ||||||||||||||||||||||||||||||| ||    
T  4891793 aaaattaaatgtaaagtgcattcaatctgctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatt 4891694  T
Q  172 ccaaagaaaacacaaaaaa 190  Q
     |||||| |||||||||||    
T  4891693 tcaaagataacacaaaaaa 4891675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 5280642 - 5280592
Alignment:
Q  91 attcaattttctctttctttcattttttccataaccaatagccaatgaaaa 141  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5280642 attcaattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 20380129 - 20380251
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||  || ||||||||| |||||||||||||| ||    
T  20380129 aaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatt 20380228  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  20380229 tcaaagataacacaaaaaactat 20380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 8032823 - 8032726
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttc-tttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||||||| | |||||||||| |||| || ||||||||| || ||||| |  | ||||| |||||||||||||||||||||||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaactt 8032726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 5280595 - 5280537
Alignment:
Q  162 aaaactttttccaaagaaaacacaaaaaa-ctatactccaaattcttatgttttagttt 219  Q
    |||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  5280595 aaaactttttcccaagaaaacacaaaaaaactatagtccaaattcttatgttttagttt 5280537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 18834065 - 18833940
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||  | || ||||||| ||||||||||||||||| | || |||||| |    
T  18834065 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttat 18833966  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||  | ||||||||||| |||||    
T  18833965 tccaagaataacacaaaaaattatac 18833940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 11031077 - 11030962
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||||||       ||||||||||||| ||||| ||||||||||| ||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaata-------aaaattgtttttatatctttctataaaacttatt 11030985  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
      ||||| || |||| |||||||    
T  11030984 ttaaagataagacaagaaactat 11030962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 44442137 - 44442285
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||    ||||||||||||||||||||||||| ||||||| || ||    
T  44442137 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaatttatt 44442236  T
Q  172 ccaaagaaaacacaaa-aaactatactccaaattcttatgttttagttt 219  Q
      ||| | |||||||| |||||||  | |||| | ||||||||||||||    
T  44442237 ttaaaaataacacaaataaactatgttacaaactattatgttttagttt 44442285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 792511 - 792386
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  792511 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 792412  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  792411 tccaaggagaacacaaaaaattatac 792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 16495019 - 16494974
Alignment:
Q  133 caatgaaaattgtttttacatcttcctataaaactttttccaaaga 178  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  16495019 caatgaaaattgtttttacatcttcctataaaacttatttcaaaga 16494974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 32428019 - 32428127
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaa-cacaaaaaactatactccaaattcttatg 210  Q
    ||||| ||| ||| |||||| ||||||||||| ||||||||| || | || |||||| ||  ||| |||| ||| ||  |||||||||||||||||||||    
T  32428019 attttctccgtaatcaatagtcaatgaaaattatttttacatgtttccatgaaacttattataaaaaaaaacaccaaggactatactccaaattcttatg 32428118  T
Q  211 ttttagttt 219  Q
    |||||||||    
T  32428119 ttttagttt 32428127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 14565528 - 14565403
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  14565528 taaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 14565429  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  14565428 tccaaggagaacacaaaaaattatac 14565403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 21539758 - 21539883
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  21539758 taaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctttccatgaaacttat 21539857  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  21539858 tccaaggagaacacaaaaaattatac 21539883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 11825438 - 11825366
Alignment:
Q  143 tgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||| | || |||||| |||||||||||||||||     |||| || ||||||||||||||||||||    
T  11825438 tgtttttacatctttccatgaaacttattccaaagaaaacacaat----tatattcaaaattcttatgttttagttt 11825366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 19264015 - 19264045
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  19264015 aatataagcaaaaaagacaaacttttatctt 19264045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 33933073 - 33932930
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| || || |||||| ||| ||||| |||||||||| || || || |||| || |    |||||| |||||||||| |||||||||||  |    
T  33933073 aaaattaaatgtaagttgcattcattttgctcttactttcattttctctatgactaataaccga----aattgtgtttacatctttctataaaacttaat 33932978  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||  | || |||||||| |||||| |||| |  |||||||||||||    
T  33932977 ccaagaataatacaaaaaattatactacaaaatactatgttttagttt 33932930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 44803899 - 44804024
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||| |||||| ||||||||||  |||    || ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  44803899 taaaattaaatacaaattgcattcaatttgttctcctatttattttctccataatttttaaccaatgagaattatttttacatctttccattaaacttat 44803998  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  44803999 tccaaggagaacacaaaaaattatac 44804024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 3201282 - 3201314
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctttt 45  Q
    ||||||||||||||||||||||| |||||||||    
T  3201282 aatataagcaaaaaagacaaactattatctttt 3201314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 3e-83; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 32624220 - 32624013
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttctttc 111  Q
    |||||||||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32624220 aatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttc 32624121  T
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  32624120 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactacactccaaattcttatgt 32624021  T
Q  212 tttagttt 219  Q
    ||||||||    
T  32624020 tttagttt 32624013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 24190418 - 24190622
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24190418 aatataag-aaaaaagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacatt-aattttctctttctttca 24190515  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24190516 ttttttccataaccaatagccaatgaaaattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 24190615  T
Q  213 ttagttt 219  Q
    |||||||    
T  24190616 ttagttt 24190622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 39555800 - 39555598
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  39555800 aatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaatgttctctctctttca 39555701  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  39555700 ttttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaacctatactccaaattcttatgtt 39555601  T
Q  213 tta 215  Q
    |||    
T  39555600 tta 39555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 12449181 - 12448985
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  12449181 aatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttga 12449082  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttat 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12449081 ttttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 12448985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 2126036 - 2126191
Alignment:
Q  64 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 163  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2126036 attctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 2126135  T
Q  164 aactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2126136 aactttttccaaagaaaacacaaaaaactatattccaaattcttatgttttagttt 2126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 15959805 - 15959648
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15959805 ttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  15959705 aaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 15959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 35691387 - 35691546
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttcct 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||    
T  35691387 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccct 35691486  T
Q  160 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  35691487 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 35691546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 6785452 - 6785608
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6785452 ttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatat 6785551  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  6785552 aaaactttttcaaaagaaaacacaaaaaactatactcc-aattcttatgttttagttt 6785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 6786834 - 6786991
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  6786834 ttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatat 6786933  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6786934 aaaactttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttt 6786991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 33369549 - 33369703
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  33369549 ttattctcataaaattaaatgcaaattacattcaattttctct--ctttcattttttccataaccaatagccaatgaaaattgtttttacatct-catat 33369645  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33369646 aaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 33369703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 40718674 - 40718831
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||| |||    
T  40718674 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcatat 40718773  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  40718774 aaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatattttagttt 40718831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 32983384 - 32983180
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||| |||||||||||  ||||          |||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  32983384 aatataagcaaaaaagacaaatttttatcttttttaagaatttttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttca 32983285  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||| |||||||    
T  32983284 ttttttccataaccaat-gccaatgaaaattgtttttacatcttcttataaaac-ttttccaaagaaaacacaaaaaactatacttccaatttttatgtt 32983187  T
Q  213 ttagttt 219  Q
    |||||||    
T  32983186 ttagttt 32983180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 42965979 - 42965824
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42965979 ttattcttataaaattaaatgcaaattacattcaattttctctctctttcattttt-ccataaccaatagccaatgaaaattgtttttacatcttcctat 42965881  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||| ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  42965880 aaaa-tttttccaaagaaaacacaaaaaactaaacttcaaatttttatgttttagttt 42965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 45226134 - 45226291
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  45226134 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctat 45226233  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| ||||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  45226234 aaaacttttttcaaagaaaatacataaaactatactctaaattattatgttttagttt 45226291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 43667514 - 43667319
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||||||||||||||| |||||          ||||||||||||||||||||| |||||||||||||||||||||  ||||||    
T  43667514 aatataagcaaaaaagacaaacttttatctttttcaagatttttttgt-ttattctcataaaattaaatgtaaattacattcaattttctct--ctttca 43667418  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||    
T  43667417 ttttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaaattatactttaaattcttatgt 43667319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 28016909 - 28016754
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28016909 ttattctcataaaattaaatgcaagttacattcaattttctct--cttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctat 28016812  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  28016811 aaaacatttttcaaagaaaacaccaaaaactatactctaaattcttatgttttagttt 28016754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 28120968 - 28120763
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| ||||||||||||||||||||||||| ||||          |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  28120968 aatataagtaaaaaagacaaacttttatcttttc-aagatttcttttgtttattcacataaaattaaatgcaaattacattcaattttctctctctttca 28120870  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  ||  ||| ||||||||||||||||||||||| |||||||| |     
T  28120869 ttttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactatactccacattcttatttc 28120770  T
Q  213 ttagttt 219  Q
    |||||||    
T  28120769 ttagttt 28120763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 7468128 - 7467970
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  | ||| |||||||||||||||||||| ||||||||||||| |    
T  7468128 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttccttt 7468029  T
Q  162 aaaactttttccaaagaaaacacaaaaaacta-tactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  7468028 aaaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttt 7467970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 47014655 - 47014501
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  47014655 ttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctat 47014557  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  47014556 aaaacttttttcaacgaaaacacaaaaaac--tactccagattcttatgttttagttt 47014501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 39932737 - 39932580
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||| ||||||||||||| |||||| |||    
T  39932737 ttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttat 39932638  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  39932637 aaaacttattaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttt 39932580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 1820411 - 1820568
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| |||||| ||| |||||||||||||||||    
T  1820411 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctat 1820509  T
Q  162 aaaactttttccaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||    
T  1820510 aaaactttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttt 1820568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 46542980 - 46543135
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  |||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||    
T  46542980 ttattctcataaaattaaatgcaaattgcatttaattttctct--ctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctat 46543077  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  46543078 aaattttttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 46543135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 13136708 - 13136566
Alignment:
Q  70 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  |||    
T  13136708 ataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctat-aattttt 13136612  T
Q  170 ttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||    
T  13136611 ttttaaagaaaacacaaaaaactatactccaaattcttatgtttta 13136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 3076291 - 3076444
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||||||| ||||||| ||||||||||||||||| || |||||||||||| ||||    
T  3076391 aaaacttattccaaataaaacacaaaaaactatgctacaaattcttatgcttta 3076444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 3875186 - 3875031
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca----atagccaatgaaaattgtttttacatcttc 157  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    ||||||||| |||||||||||||||| |||    
T  3875186 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattc 3875087  T
Q  158 ctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||||||||||||||| ||| |||||||  ||||||||||| |||||||||||||||||    
T  3875086 ctataaaactttttcaaaaaaaaacac--aaaactatacttcaaattcttatgtttta 3875031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 11241073 - 11241176
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 11241172  T
Q  212 ttta 215  Q
    ||||    
T  11241173 ttta 11241176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 24728792 - 24728634
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||| ||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccat 24728693  T
Q  162 aaaactttttccaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||    
T  24728692 gaaacttattcgaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttt 24728634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 47600204 - 47600048
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  47600204 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctat 47600105  T
Q  162 aaaact-ttttccaaaga--aaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||| ||||   ||||  | ||| |||||||||||||| ||||||||||||||||    
T  47600104 aaaactttttttttaagattacacaaaaaaaactatactctaaattcttatgtttta 47600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 62 - 214
Target Start/End: Complemental strand, 46818667 - 46818515
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||| |||||||| |||| ||||||||   ||||||||| |||||||| | |||||||||||||||||||||| ||||||||||    
T  46818667 ttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttcctat 46818568  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttt 214  Q
    |||||||||| ||||||||| |||||||||||||||  |||||||||||||||    
T  46818567 aaaacttttttcaaagaaaatacaaaaaactatactttaaattcttatgtttt 46818515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 44148997 - 44148844
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctct--ctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccat 44148902  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  44148901 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 44148844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 2246179 - 2246026
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || |||  ||| ||| ||||||||||||||||| ||||||||| |||||||    
T  2246179 ttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctat 2246080  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||||||| || |||||||||||||||||||||||||| ||||| | ||||||||    
T  2246079 aaaacttatttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 37735548 - 37735395
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | || |||||| ||||||| ||||||||||| |||||||||||||| |||||| ||    
T  37735548 ttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccat 37735449  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
     |||||| |||||||||||| ||||||||||||||| || ||||||||||||||    
T  37735448 gaaacttattccaaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 33431557 - 33431712
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||||||||||||||||||| |||| ||||||    
T  33431557 ttattctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctat 33431654  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||  ||| ||||||||||||||||| || |||||||||||| | ||||||    
T  33431655 aaaacttttttaaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttt 33431712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 3861858 - 3861703
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| |||||||||||||||||||| ||| |||||| |||  |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||    
T  3861858 ttattcttataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaat 3861761  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||| |||||||||| |||||| |||||| |||||| ||||||||||||||    
T  3861760 aaaacttattctaaagaaaacataaaaaattatacttcaaattattatgttttagttt 3861703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 10558920 - 10558796
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctata 162  Q
    ||||||||| |||||||||| |||||||||| |||||| ||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  163 aaactttttccaaagaaaacacaaa 187  Q
    ||| || ||||||||||||||||||    
T  10558820 aaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 16854139 - 16854250
Alignment:
Q  65 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaa 164  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaa 16854238  T
Q  165 actttttccaaa 176  Q
    ||||||| ||||    
T  16854239 acttttttcaaa 16854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 23392330 - 23392211
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||| || || ||||    
T  23392330 ttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttctat 23392232  T
Q  162 aaaactttttccaaagaaaac 182  Q
    ||||||| |||||||||||||    
T  23392231 aaaacttattccaaagaaaac 23392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 32742342 - 32742210
Alignment:
Q  87 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaa 186  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    ||||||||||||||||| || ||  |||||||||||||  |||||||||||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaatgattaatgaaaattgtttttatatttttttataaaactttttttaaagaaaacacaa 32742243  T
Q  187 aaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||| ||||||||||| ||||||||    
T  32742242 aaaactatactcaaaattcttatgctttagttt 32742210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 43765290 - 43765438
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||  |||||| |||||||||| |||||||||||| | |||| |||||| | |||||| |||| |||||||||| |||||||||||||||||||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttat 209  Q
    ||||||| ||| ||||||||||| ||||||||||||| |||||| ||||    
T  43765390 aaaacttattctaaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 52984979 - 52985086
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52984979 attttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgt 52985078  T
Q  212 tttagttt 219  Q
     |||||||    
T  52985079 attagttt 52985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 6787154 - 6787050
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6787154 ttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctat 6787056  T
Q  162 aaaact 167  Q
    ||||||    
T  6787055 aaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 50369954 - 50370071
Alignment:
Q  62 ttattctcataaaattaaatgcaaatta----cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 157  Q
    |||||||||||||||||||| |||||||    ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  50369954 ttattctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttc 50370052  T
Q  158 ctataaaactttttccaaa 176  Q
    |||||||||||||| ||||    
T  50370053 ctataaaacttttttcaaa 50370071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 25391680 - 25391824
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||| || || | ||||||| | ||||||||||||||||||||||||| ||| |||    
T  25391680 ttattctcataaaattaaatgcaaattacattcaatttt-tatctcttccacttct-ccataactattagccaatgaaaattgtttttacattttcatat 25391777  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttat 209  Q
    ||||| || || ||||||||||||||||| |||||| |||||||||||    
T  25391778 aaaac-ttatctaaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 47303071 - 47302916
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccta 160  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| ||||||||| | ||||| ||||||||||||||||||  |||||||||||||||    
T  47303071 ttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttccta 47302973  T
Q  161 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    | |||||| |||| || |||||||  |||| |||||||||| ||||||| |||||||||    
T  47302972 tgaaacttattcctaaaaaaacac--aaaattatactccaatttcttatattttagttt 47302916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 5858526 - 5858404
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatt 5858427  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  5858426 tcaaggataacacaagaaactat 5858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 5950445 - 5950567
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | |||| ||||| |||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| ||    
T  5950445 aaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatt 5950544  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  5950545 tcaaggataacacaagaaactat 5950567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 7397712 - 7397834
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||| || ||    
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatt 7397811  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  7397812 tcaaagataacacaaaaaactat 7397834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 7876091 - 7875952
Alignment:
Q  78 aaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat--aaaactttttccaa 175  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||| |||||||||||| ||||  ||||     | |||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattcaa 7875992  T
Q  176 agaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||||||||||||||||| | |||||| |||| |||||    
T  7875991 agaaaacacaaaaaactataattcaaatttttatatttta 7875952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 1034854 - 1035004
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||| |||||||||||||||| | | || |  ||||| ||  |||||||||| | |||||||||||||||| ||||||  ||    
T  1034854 ttattctcatgaaattaaatgcgaattacattcaatttttt-tctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatcttctcat 1034952  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    ||||||| |||||||||||||||  ||||| |||| ||||||||||||||||||    
T  1034953 aaaacttattccaaagaaaacac--aaaacaatacgccaaattcttatgtttta 1035004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 16688142 - 16688264
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||| ||| | || ||||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  16688142 aaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 16688241  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||| | |||| ||||||||||    
T  16688242 tcaaaaataacataaaaaactat 16688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 30221771 - 30221874
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||| ||||||||||||| ||||| |||| |||||||||||||||| ||||||||| ||  ||||||||||||||||| |||| ||||| |||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattccaagttcttatgt 30221870  T
Q  212 ttta 215  Q
    ||||    
T  30221871 ttta 30221874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 45840220 - 45840074
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||   |||||||||||||||||| |||||||||||||||| | ||    
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatt 45840122  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||| | |||||||||||||||  | |||| | ||||||||||||||    
T  45840121 tcaaaaataacacaaaaaactatgttacaaactattatgttttagttt 45840074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 298812 - 298676
Alignment:
Q  84 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaaca 183  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||||||| |||||  |||||||||||||| || |||||| ||| ||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccat-aaacttattctaaagaaaaca 298714  T
Q  184 caaaaaactatactccaaat--tcttatgttttagttt 219  Q
    ||  |||||||||| ||| |  | ||||||||||||||    
T  298713 catcaaactatacttcaagttattttatgttttagttt 298676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 37538815 - 37538937
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||| |||||| | |||||||||| |||  ||||||||||| || |||||||| | |||||||||||||| |||||||||||||||||||||| ||    
T  37538815 aaaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatt 37538914  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     ||| || ||||||| |||||||    
T  37538915 tcaaggataacacaagaaactat 37538937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 32318687 - 32318571
Alignment:
Q  100 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt-tttccaaagaaaacacaaaaaactatactc 198  Q
    ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||  ||| |||| | |||||| |||||||    
T  32318687 tctctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaaacaaaaaagaaaaaattatactc 32318588  T
Q  199 caaattcttatgtttta 215  Q
    |||||| |||| |||||    
T  32318587 caaatttttatatttta 32318571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 50012587 - 50012727
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||| |||| |||||||||||| |||||| || |||||||    
T  50012587 ttattcttataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaattatttttatatattcctat 50012685  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
                 ||||||||||||||||||||||||||||||| ||| |||||    
T  50012686 ------------gaagaaaacacaaaaaactatactccaaattcctatatttta 50012727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 8889845 - 8889729
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||| || |||||||||       |||||||||||||||||||||||||||||||| ||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaat-------gaaaattgtttttacatcttcctataaaacttatt 8889753  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
     ||| || ||||||| ||||||||    
T  8889752 tcaaggataacacaataaactata 8889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 25185459 - 25185341
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   ||||||||| ||||||| ||||||||||||||||||| ||    
T  25185459 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatt 25185360  T
Q  172 ccaaagaaaacacaaaaaa 190  Q
     |||||| |||||||||||    
T  25185359 tcaaagataacacaaaaaa 25185341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 44510374 - 44510252
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| ||||   |||||||||||||||||||| |||||||||||| || ||    
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatt 44510275  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||| | |||||||||||||||    
T  44510274 tcaaaaataacacaaaaaactat 44510252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 4672924 - 4672984
Alignment:
Q  159 tataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4672924 tataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatattttagttt 4672984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  80 atgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtt 146  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||    
T  14086966 atgcaaattacattcaattttctct--cttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 30701524 - 30701393
Alignment:
Q  88 tacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaa 187  Q
    |||||||||||| |||| | ||||||||| || |||| |||   |||||||||||| |||| ||||||||||||||||||| || |||||| ||||||||    
T  30701524 tacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaa 30701425  T
Q  188 aaactatactccaaattcttatgttttagttt 219  Q
    ||| |||  | |||| |  |||||||||||||    
T  30701424 aaattatgttacaaactactatgttttagttt 30701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 35366358 - 35366211
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||||| |||| | |||||||||| || | ||| ||||||  || |||||||||| ||||| ||||||||||||||||||| |||||||| || ||    
T  35366358 aaaattaaattcaaagtgcattcaatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctataaaatttatt 35366259  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  35366258 tcaacgataacacaagaaactatgttgcaaactactatgttttagttt 35366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 52841599 - 52841453
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 172  Q
    ||||||| |||||||| || ||| ||| ||||| ||||||||||  | ||||| |||| ||||||||||||||||| ||||||| |||| |||||| ||     
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattt 52841500  T
Q  173 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     || || || |||| |||||||||| |||| | || |||||||||||    
T  52841499 taaggataagacaagaaactatactacaaactattgtgttttagttt 52841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 41063747 - 41063840
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 165  Q
    ||||||||||||||| | ||||||||||  ||| ||||| ||||| || ||||| |||| |||||||||||| |||||||||||| ||||||||    
T  41063747 aaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaa 41063840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 47026655 - 47026736
Alignment:
Q  74 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tagccaatgaaaattgtttttacatc 154  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  47026655 aattaaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaattatttatacatc 47026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 15912204 - 15912300
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| ||  ||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  15912204 aaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaactt 15912300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 13351686 - 13351785
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||| |||||||||| | ||||||||||  |||   ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttttt 13351785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 50176588 - 50176675
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| |||||||||||||||||||||||||||| || || |||||| |||||||||||||||  | |||| |  |||||||||||||    
T  50176588 ccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttt 50176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 28916675 - 28916549
Alignment:
Q  70 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    ||||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || |||||||||||| |||||||||||| | || ||||||     
T  28916675 ataaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaactta 28916576  T
Q  170 ttccaaagaaaacacaaaaaactatac 196  Q
    ||||||  | ||||||||||| |||||    
T  28916575 ttccaagaagaacacaaaaaattatac 28916549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 23873986 - 23873861
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| |||| |||||  ||| | ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  23873986 taaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 23873887  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  23873886 tccaaggagaacacaaaaaattatac 23873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 50665259 - 50665315
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 118  Q
    |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  50665259 ttattctcatgaaattaattgcaaattacatttaattttctctctctttcatttttt 50665315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 34102127 - 34102049
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 151  Q
    ||||||||||||||| | ||| |||||| |||| ||||||| ||| || |||||||||| ||||||||||||||||||||    
T  34102127 aaaattaaatgcaaagtgcat-caatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 16661521 - 16661639
Alignment:
Q  72 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 169  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| |||||| ||||||     
T  16661521 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 16661618  T
Q  170 ttccaaagaaaacacaaaaaa 190  Q
    || |||||| |||||||||||    
T  16661619 tttcaaagataacacaaaaaa 16661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 25990749 - 25990874
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| ||||||||| || | || |||||| |    
T  25990749 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatatttccatgaaacttat 25990848  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  25990849 tccaaggagaacacaaaaaattatac 25990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 38942600 - 38942475
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||| || ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  38942600 taaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 38942501  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  38942500 tccaaggagaacacaaaaaattatac 38942475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 40220057 - 40220182
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  40220057 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 40220156  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    ||||| || ||||||||||| |||||    
T  40220157 tccaaggagaacacaaaaaattatac 40220182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 42724101 - 42724185
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 157  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| | |||||| |||| | ||| ||||||||||||||||||||    
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttc 42724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 46949322 - 46949446
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    ||||||||||||||||||  |||||||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | || |||||| |    
T  46949322 taaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 46949421  T
Q  171 tccaaagaaaacacaaaaaactata 195  Q
    ||||| || ||||||||||| ||||    
T  46949422 tccaaggagaacacaaaaaattata 46949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 11241039 - 11241077
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  11241039 ttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 51339012 - 51338938
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaa 186  Q
    ||||| || ||||| |||| ||||||||||||| ||||||||||| |||| |||||| || |||||| |||||||    
T  51339012 attttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatttcaaagacaacacaa 51338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 51840610 - 51840536
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaa 186  Q
    ||||| || ||||| |||| ||||||||||||| ||||| ||||| |||| |||||| ||||||||| |||||||    
T  51840610 attttctctataactaataaccaatgaaaattgattttatatctttctatgaaacttattccaaagataacacaa 51840536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 39151315 - 39151242
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgt 145  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || ||||| |||| ||||||||||||||    
T  39151315 aaaattaaatgtaaagtgcattcaatttgctttatctttcattttatcaataactaataaccaatgaaaattgt 39151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 43656196 - 43656071
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| | |||||    || |||||||||||| |||||||||||| | || |||||| |    
T  43656196 taaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 43656097  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    | ||| || ||||||||||| |||||    
T  43656096 ttcaaggagaacacaaaaaattatac 43656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 43359696 - 43359740
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcatttt 116  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcatttt 43359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 46803760 - 46803704
Alignment:
Q  138 aaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 194  Q
    ||||||||||||||||||| |||| |||||| || ||| || |||||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactat 46803704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 35884212 - 35884337
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| |||| ||| |  ||||  ||| ||||| || ||||    || |||||||||||| |||||||||||| | |||||| || |    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatttttacatctttccataaaatttat 35884311  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    | |||| | ||||||||||| |||||    
T  35884312 ttcaaaaagaacacaaaaaattatac 35884337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 2125984 - 2126016
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctttt 45  Q
    |||||||| ||||||||||||||||||||||||    
T  2125984 aatataagtaaaaaagacaaacttttatctttt 2126016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 2459957 - 2459881
Alignment:
Q  143 tgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||  | |||||| |||||| || |||||||| | ||||  |||||||| ||||| ||||||||    
T  2459957 tgtttttacatcttcccctgaaacttattccaaggagaacacaaatagctatgttccaaattattatgctttagttt 2459881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 6786753 - 6786781
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  6786753 aatataagcaaaaaagacaaacttttatc 6786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 6787236 - 6787208
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  6787236 aatataagcaaaaaagacaaacttttatc 6787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 7468198 - 7468170
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  7468198 aatataagcaaaaaagacaaacttttatc 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 28016989 - 28016961
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  28016989 aatataagcaaaaaagacaaacttttatc 28016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 44056457 - 44056377
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 151  Q
    ||||||||||||||| || ||||| |||||||||   | | ||||| ||||||| || || ||||||| ||||||||||||    
T  44056457 taaaattaaatgcaatttgcattccattttctctccttcttattttctccataatcattaaccaatgagaattgtttttac 44056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 1e-82; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 37042590 - 37042384
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| |||||||||||| ||| |||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37042590 aatataaggaaaaaagacaaattttaatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttca 37042491  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  37042490 ttttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaaactatactccaaatttttatgtt 37042391  T
Q  213 ttagttt 219  Q
    |||||||    
T  37042390 ttagttt 37042384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 11054481 - 11054278
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||    |    
T  11054481 aatataagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttc----a 11054386  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact-ttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  11054385 ttttttccataaccaatagccaatgaaaattgtttttaaatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaattcttatat 11054286  T
Q  212 tttagttt 219  Q
    ||||||||    
T  11054285 tttagttt 11054278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 23311766 - 23311560
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||| |||||||||||||||| |||||         |||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  23311766 aatataagcaaaaaagtcaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgtatattacattcaattttctctttctttca 23311667  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||    
T  23311666 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactatactctaaatttttatgtt 23311567  T
Q  213 ttagttt 219  Q
    |||||||    
T  23311566 ttagttt 23311560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 14752332 - 14752175
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14752332 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14752232 aaatttttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 14752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 30189569 - 30189724
Alignment:
Q  61 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttcct 159  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30189569 gttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcct 30189668  T
Q  160 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30189669 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 30189724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 36546493 - 36546699
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||| |||||| |||||          |||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  36546493 aatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttca 36546592  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  36546593 ttttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaatttttatgtt 36546692  T
Q  213 ttagttt 219  Q
    |||||||    
T  36546693 ttagttt 36546699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 36561822 - 36561616
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||||||||||||||||||||| |||||| |||||          |||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  36561822 aatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttca 36561723  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  36561722 ttttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaatttttatgtt 36561623  T
Q  213 ttagttt 219  Q
    |||||||    
T  36561622 ttagttt 36561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 28875406 - 28875563
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  28875406 ttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 28875505  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  28875506 aaaactttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttt 28875563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 50651161 - 50651004
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  50651061 aaaactttttgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttt 50651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 35963152 - 35963309
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||    
T  35963152 ttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctat 35963251  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35963252 aaaactttttccaaacaaaacacaaaaaactatactccaaattcttatgttttagttt 35963309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 6438083 - 6438229
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6438083 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6438182  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  6438183 aaagcttttttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 6075081 - 6075238
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| |    
T  6075081 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcctgt 6075180  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  6075181 aacactttttccaaagaaaacacaaaaaattatactccaaattcttatactttagttt 6075238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 47864191 - 47864348
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  47864191 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctat 47864290  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||    
T  47864291 aaaacttttttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttt 47864348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 37074958 - 37075117
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaatagccaatgaaaattgtttttacatcttcct 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  37074958 ttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcct 37075057  T
Q  160 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  37075058 ataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 37075117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 7866607 - 7866450
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  7866607 ttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttat 7866508  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||    
T  7866507 aaaacttttttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttt 7866450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 46711781 - 46711625
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  46711781 ttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctat 46711683  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  46711682 aaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttt 46711625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 579258 - 579112
Alignment:
Q  66 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 165  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  579258 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctataaaa 579159  T
Q  166 ctttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||||| ||||||||||||||||||       ||||||||||||||||||||||    
T  579158 cttttttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttt 579112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 53270233 - 53270386
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttct--ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 159  Q
    |||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||| ||||| |||||| ||    
T  53270233 ttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttct 53270332  T
Q  160 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttt 213  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53270333 atgaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttt 53270386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 54465019 - 54464863
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  54465019 ttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat 54464920  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||  |||||  ||||||||||||||||| |||||| |||||||||||||||||||||    
T  54464919 -aatttttttttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 54464863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 50730109 - 50730266
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| |  || |||||||||||||||||    
T  50730109 ttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50730207  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50730208 aaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttt 50730266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 50782745 - 50782588
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| |  || |||||||||||||||||    
T  50782745 ttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50782647  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50782646 aaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttt 50782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 19464075 - 19464234
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||| | ||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||   ||||||||||||||||  ||||||||||    
T  19464075 ttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctat 19464174  T
Q  162 aaaactttttccaaagaaaacacaaaaaac--tatactccaaattcttatgttttagttt 219  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19464175 aaaacttttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttt 19464234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 2927289 - 2927447
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccat 2927388  T
Q  162 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| |||||||||||| || |||||||||| || |||||||||||||||||||||    
T  2927389 aaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttt 2927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 8703109 - 8703262
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  8703109 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 8703206  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||  |||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  8703207 aaatttttttccaaa-aacacac-aaaaactatactccaaattcttatgttttagttt 8703262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 9054996 - 9055149
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9054996 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 9055093  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||  |||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  9055094 aaatttttttccaaa-aacacac-aaaaactatactccaaattcttatgttttagttt 9055149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 26208014 - 26208171
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||| |||||| |||| ||  |||||||||||||||||||||||||||||| | ||    
T  26208014 ttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccat 26208113  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  26208114 gaaacttattccagacaaaacacaaaaaactatactctaaattcttatgttttagttt 26208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 20847391 - 20847240
Alignment:
Q  63 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctata 162  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||| ||||  ||||||||||||||||  ||||||||||||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  163 aaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttta 215  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  20847291 aaacttattccaaagaaaacaca-aaaattatactccaaattcttatgtttta 20847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 29235193 - 29235344
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| |||||||||| ||||||||||||||      | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29235193 ttattatcattaaattaaatgtaaattacattcaat------tctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 29235286  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||||    
T  29235287 taaacgttttctaaagaaaatacaaaaaactatactctaaattcttatgttttagttt 29235344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 32619954 - 32619804
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |  || ||| |||||||||||||||||||||||||| ||||||||||||| |||    
T  32619954 ttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttcttat 32619855  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||| | ||||||||||||||||||| | ||||||||||||||| |||||    
T  32619854 aaaacctattccaaagaaaacacaaaatattatactccaaattctcatgtt 32619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 62 - 214
Target Start/End: Complemental strand, 41476453 - 41476308
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||| ||       ||||||||||||| |||||||||||| ||||    
T  41476453 ttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttcccta-------gccaatgaaaattatttttacatctttctat 41476361  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtttt 214  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  41476360 aaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttt 41476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 26725115 - 26724958
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||| |||||||||||||||| |||| ||| ||||  ||||| ||||||| ||||| ||||||||||||||||||||||||||  |     
T  26725115 ttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcag 26725016  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  26725015 aaaacttattccaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 26724958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 23910668 - 23910484
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||| ||||||||||| |||||          ||||||||||| ||||||||||||||||||||||||                   
T  23910668 aatataagcaaaaaagacaaatttttatctttttcaagattttttttgtttattctcatataattaaatgcaaattacattcaat--------------- 23910584  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  23910583 ---tttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctatactctaaattcttatgtt 23910487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 31836966 - 31837076
Alignment:
Q  109 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    |||||||| |||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31836966 ttcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttctta 31837065  T
Q  209 tgttttagttt 219  Q
    |||||||||||    
T  31837066 tgttttagttt 31837076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 9264610 - 9264708
Alignment:
Q  121 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagttt 9264708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 34722724 - 34722623
Alignment:
Q  67 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac 166  Q
    |||||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaac 34722625  T
Q  167 tt 168  Q
    ||    
T  34722624 tt 34722623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 3972275 - 3972402
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | ||||||||||| ||||||||||||||||||||||||| ||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  162 aaaactttttccaaagaaaacacaaaaaa 190  Q
    ||||||| || ||||||||||||||||||    
T  3972375 aaaacttatt-caaagaaaacacaaaaaa 3972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 3997603 - 3997476
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | ||||||||||| ||||||||||||||||||||||||| ||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  162 aaaactttttccaaagaaaacacaaaaaa 190  Q
    ||||||| || ||||||||||||||||||    
T  3997503 aaaacttatt-caaagaaaacacaaaaaa 3997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 47115849 - 47116006
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||  ||||| |||| |||||||||||| || |||||| ||||||| ||||| |||| |||||||| ||||||||||| | ||    
T  47115849 ttattctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattgcttttacatctttccat 47115948  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    |||| || ||| |||  |||||||||||| ||||||| ||||||||||||||||||||    
T  47115949 aaaatttattctaaaacaaacacaaaaaattatactctaaattcttatgttttagttt 47116006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 8097132 - 8096985
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||| ||||| |||||||||||| |||||||||||||||||||||||| ||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  8097032 tcaaggataacacaagaaactatgttgcaaactactatgttttagttt 8096985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 6752670 - 6752800
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||| |||| ||||||||||||||||||||||| ||| |||| |||| |||||| ||||||||||||||||||| ||||||||||||||||||| | ||    
T  6752670 ttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctttccat 6752769  T
Q  162 aaaactttttccaaagaaaacacaaaaaact 192  Q
     |||||| ||  ||| ||||| |||||||||    
T  6752770 gaaacttattaaaaaaaaaacccaaaaaact 6752800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 34194892 - 34194988
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||||||| | |||||| ||| |||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaactt 34194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 46557325 - 46557237
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttta 150  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 22479168 - 22479021
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||| |||||||||||||||||||||||||| ||    
T  22479168 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatt 22479069  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||||||  | |||| |  |||||||||||||    
T  22479068 tcaaagataacacaaaaaactatgttacaaactactatgttttagttt 22479021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 30454838 - 30454692
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||| ||||| ||||||||||||||||||| ||||||||||| ||    
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatt 30454740  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     ||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  30454739 tcaaggataacacaagaaactatgttgcaaactactatgttttagttt 30454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 16033094 - 16032981
Alignment:
Q  79 aatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaga 178  Q
    |||||||| | |||||||||| || | |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| || ||| ||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaagga 16032995  T
Q  179 aaacacaaaaaact 192  Q
     ||||||| |||||    
T  16032994 taacacaagaaact 16032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 47867036 - 47866941
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcc 158  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| |||||||||| ||||    
T  47867036 ttattctcataaa-ttaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 47866941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 195
Target Start/End: Original strand, 38401384 - 38401507
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| |||||| |||||||||| | ||||||||| || ||||  ||   |||||||||||| ||||||||||| |||||||||||| ||    
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatt 38401483  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
     |||||| ||||||||||||||||    
T  38401484 tcaaagataacacaaaaaactata 38401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 33974683 - 33974614
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatag 131  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  33974683 ttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 10114915 - 10115062
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  10114915 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10115014  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| || |||||||| |||  | |||| |  |||||||||||||    
T  10115015 tcaaagataatacaaaaaattatgttacaaactactatgttttagttt 10115062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 22456122 - 22455975
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| ||||||||||||||||| ||    
T  22456122 aaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatt 22456023  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||  |||||||||||||||  | |||| |  |||||||||||||    
T  22456022 tcaaagttaacacaaaaaactatgttacaaactactatgttttagttt 22455975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 7886731 - 7886609
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||| ||||||||| | |||||||||| |||| ||||||||||| || ||||| |||| ||||||||||||||||||||||||| |||||||| || ||    
T  7886731 aaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatt 7886632  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||  | ||||||| |||||||    
T  7886631 tcaagaataacacaagaaactat 7886609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 21214245 - 21214367
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   ||||||||||||||||||||||||| ||||||||||| ||    
T  21214245 aaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatt 21214344  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||| | |||||||||||||||    
T  21214345 tcaaaaataacacaaaaaactat 21214367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 46918327 - 46918205
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    |||||||| |||||| | ||||| |||| | || ||||||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||| ||    
T  46918327 aaaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttatt 46918228  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
      || || ||||||| |||||||    
T  46918227 ttaaggataacacaagaaactat 46918205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 38674870 - 38674959
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 151  Q
    ||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||| | ||||| |||||| |||||||||||||||||||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 10252015 - 10252130
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  10252015 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10252114  T
Q  172 ccaaagaaaacacaaa 187  Q
     |||||| || |||||    
T  10252115 tcaaagataatacaaa 10252130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 33973627 - 33973533
Alignment:
Q  126 caatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||| |||||||| |||| || |||| ||||||||||||||  ||||||||||||| |||||||||||||||||| |||| |||||||||    
T  33973627 caatagccactgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttt 33973533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 48802604 - 48802548
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 118  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  48802604 ttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttttt 48802548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 10014273 - 10014388
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||| ||||| | |||||||||| |||| | ||| ||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  10014273 aaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10014372  T
Q  172 ccaaagaaaacacaaa 187  Q
     |||||| || |||||    
T  10014373 tcaaagataatacaaa 10014388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 47444087 - 47443941
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||   ||| ||||||||||||||||||||| |||||||| || ||    
T  47444087 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatctt-ctataaaatttatt 47443989  T
Q  172 ccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| |||||||||||||||  | |||| |  |||||||||||||    
T  47443988 tcaaagataacacaaaaaactatgttacaaactaatatgttttagttt 47443941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 8769651 - 8769546
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 211  Q
    ||||| ||||||| || |||||||| |||||| |||||||| ||||| || || ||||||  ||| ||||||| |||||||||||||| |||| ||||||    
T  8769651 attttctccataatcattagccaataaaaattatttttacaacttcccatgaatcttttt--aaaaaaaacaccaaaaactatactcctaattgttatgt 8769554  T
Q  212 tttagttt 219  Q
    ||||||||    
T  8769553 tttagttt 8769546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 3084256 - 3084147
Alignment:
Q  110 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttat 209  Q
    ||||||| |||||||| |||| |||||||| |||||||||||||||||| ||||||||  ||  || ||  |||||| ||| |||||| |||||||| ||    
T  3084256 tcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaagaaattatacttcaaattctcat 3084157  T
Q  210 gttttagttt 219  Q
     |||||||||    
T  3084156 attttagttt 3084147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 31126214 - 31126339
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| |||||||||||| | ||||||||| |    
T  31126214 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttat 31126313  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    | ||| || ||||||||||| |||||    
T  31126314 ttcaaggagaacacaaaaaattatac 31126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 48291826 - 48291922
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||||||  ||| |||   |||||||||||| |||||||| |||||||||||||||    
T  48291826 aaaattaaatggaaagtgcattcaatttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctataaaactt 48291922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 1335112 - 1335231
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||| |||||| |||||||||||| | || |||||| |    
T  1335112 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattatttttacatctttccatgaaacttat 1335211  T
Q  171 tccaaagaaaacacaaaaaa 190  Q
    ||||| || |||||||||||    
T  1335212 tccaaggagaacacaaaaaa 1335231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 9264008 - 9264071
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataac 125  Q
    |||||||||||||||||||||||||||||||  |||||| ||| ||||||||||| ||| ||||    
T  9264008 ttattctcataaaattaaatgcaaattacatctaattttatctctctttcattttctccgtaac 9264071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 31292664 - 31292762
Alignment:
Q  121 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||| |||| ||||||||||||||||||||||||||| ||| ||||  |||||| || |||| || ||| |||||| ||||||   ||||||||||||    
T  31292664 ataacaaataaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttt 31292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 41936313 - 41936195
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||| ||||||| ||||||||||||| ||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaattaaaattgattttacatcttcccat 41936223  T
Q  162 aaaactttttccaaagaaaacacaaaaa 189  Q
     |||||| ||| ||| ||||||||||||    
T  41936222 gaaacttattctaaataaaacacaaaaa 41936195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 54725670 - 54725628
Alignment:
Q  126 caatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  54725670 caataaccaatgaaaattgtttttacatcttcctataaaactt 54725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 2994532 - 2994407
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat----cttcctataaaact 167  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||| ||||||||    ||||||||||||||    
T  2994532 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg-ttttacatcttccttcctataaaact 2994434  T
Q  168 ttttccaaagaaaacacaaaaaactat 194  Q
    | || |||  | |||||||||||||||    
T  2994433 tatttcaagcataacacaaaaaactat 2994407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 8764744 - 8764646
Alignment:
Q  119 ccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagtt 218  Q
    |||||| || |||||||| |||||| |||||||| ||||| || ||  |||||  ||| |||||||||||| ||||||||| |||| |||||||||||||    
T  8764744 ccataatcattagccaataaaaattatttttacaacttcccatgaattttttt--aaaaaaaacacaaaaagctatactcctaattgttatgttttagtt 8764647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 51426621 - 51426706
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 156  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    || |||||||||||| ||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 51426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 55400740 - 55400865
Alignment:
Q  71 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 170  Q
    |||||||||||||||||| ||||||||||  ||    ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || |||||| |    
T  55400740 taaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 55400839  T
Q  171 tccaaagaaaacacaaaaaactatac 196  Q
    |||||||| ||||||||||| |||||    
T  55400840 tccaaagagaacacaaaaaattatac 55400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 6784390 - 6784450
Alignment:
Q  134 aatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 194  Q
    |||||||||| ||||||||||||||||||||| || ||  ||||| |||||||||||||||    
T  6784390 aatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaactat 6784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  67 ctcataaaattaaatgcaaattacattcaattttct 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 25242227 - 25242145
Alignment:
Q  137 gaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||| |||||| ||||||||||| ||  ||||| |||||||||||||||  | |||| |  |||||||||||||    
T  25242227 gaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatgttttagttt 25242145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 36150946 - 36151076
Alignment:
Q  90 cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgt-ttttacatcttcctataaaactttttccaaagaaaacacaaaa 188  Q
    |||| ||||| |||||  || |||||| ||||||| ||||| ||||| |||||| | ||||||||||||| ||||||||| ||| ||  ||||  |||||    
T  36150946 catttaatttactcttatttccattttctccataatcaataaccaataaaaattatgttttacatcttcccataaaacttattctaagaaaaaagcaaaa 36151045  T
Q  189 aactatactccaaattcttatgttttagttt 219  Q
    ||||| |||| |||||  || ||||||||||    
T  36151046 aactacactcgaaattactaggttttagttt 36151076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 17587779 - 17587856
Alignment:
Q  142 ttgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||| || |||  | |||| || |||||||| | ||||||  |||||||||||||    
T  17587779 ttgtttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgttttagttt 17587856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 46557219 - 46557166
Alignment:
Q  137 gaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaa 190  Q
    ||||||| |||||||||||||| || |||||| ||| |||||||||||||||||    
T  46557219 gaaaattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaaa 46557166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 2878210 - 2878253
Alignment:
Q  170 ttccaaagaaaacacaaaaaactatactccaaattcttatgttt 213  Q
    ||||||||| |||||||||||||||| || ||||||||||||||    
T  2878210 ttccaaagataacacaaaaaactatattctaaattcttatgttt 2878253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 8769683 - 8769644
Alignment:
Q  64 attctcataaaattaaatgcaaattacattcaattttctc 103  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  8769683 attctcattaaattaaatgcaaattacgttcaattttctc 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 23209393 - 23209298
Alignment:
Q  73 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 168  Q
    |||||||||||||||| |||||| | |  |||  |||||||||| ||  |||| |||| ||||| |||||| ||||| |||||| |||||||||||    
T  23209393 aaattaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaactt 23209298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 30612221 - 30612276
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaact 167  Q
    ||||||||||||| || || ||||||| ||||||||||||||||| |||| |||||    
T  30612221 attttttccataatcattaaccaatgagaattgtttttacatctttctatgaaact 30612276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 14752412 - 14752382
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatctt 43  Q
    |||||||||||||||||||||||||||||||    
T  14752412 aatataagcaaaaaagacaaacttttatctt 14752382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 36509582 - 36509540
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctct 104  Q
    |||||||||| |||||||||| ||||||||||| |||||||||    
T  36509582 ttattctcatcaaattaaatgtaaattacattcgattttctct 36509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 45868582 - 45868536
Alignment:
Q  110 tcattttttccataaccaatagccaatgaaaattgtttttacatctt 156  Q
    ||||||| ||| |||| |||| |||||||||||||||||||||||||    
T  45868582 tcattttctccgtaacaaataaccaatgaaaattgtttttacatctt 45868536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 8764783 - 8764746
Alignment:
Q  64 attctcataaaattaaatgcaaattacattcaattttc 101  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8764783 attctcattaaattaaatgcaaattacgttcaattttc 8764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 34022662 - 34022726
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | ||||||||| || ||| || ||||||||||| |||||    
T  34022662 ccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattatac 34022726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 37074878 - 37074906
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  37074878 aatataagcaaaaaagacaaacttttatc 37074906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 45781460 - 45781524
Alignment:
Q  132 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatac 196  Q
    ||||||| |||| |||||||||||| | || |||||| ||| ||||| ||||||||||| |||||    
T  45781460 ccaatgagaattatttttacatctttccatgaaacttattctaaagagaacacaaaaaattatac 45781524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 47866921 - 47866893
Alignment:
Q  189 aactatactccaaattcttatgttttagt 217  Q
    |||||||||||||||||||||||||||||    
T  47866921 aactatactccaaattcttatgttttagt 47866893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 148; Significance: 8e-78; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 77904 - 78110
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||||||||||||||||||| |||||          ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  77904 aatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgtaaattacattcaattttcactttctttca 78003  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  78004 ttttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactatactctaaattcttatgtt 78103  T
Q  213 ttagttt 219  Q
    |||||||    
T  78104 ttagttt 78110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 3642 - 3447
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    ||||||||||||||||| |||||||||||||||| ||||          ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  3642 aatataagcaaaaaagataaacttttatcttttctaagattgttgttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttca 3543  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattctta 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3542 ttttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaaactatactccaaattctta 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 9992 - 10194
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| ||||||| ||||||||||||||||| ||||          ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  9992 aatataagtaaaaaaggcaaacttttatcttttctaagattttttttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttca 10091  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  10092 ttttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaaactacattccaaattcttatgtt 10191  T
Q  213 tta 215  Q
    |||    
T  10192 tta 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 44936 - 44779
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||  || |||||||    
T  44936 ttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcctat 44837  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  44836 aaaactttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttt 44779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 154808 - 155013
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttca 112  Q
    |||||||| |||||||| ||||||||||||||| |||||          |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  154808 aatataagtaaaaaagataaacttttatctttttcaagattttttttttttattctcataaaattaaatgcaaattacattaaattttctctatctttca 154907  T
Q  113 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgtt 212  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||| || |||||||||| | || |||||||||||    
T  154908 ttttttccataaccaatagccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatac-aaaaactatatttcagattcttatgtt 155006  T
Q  213 ttagttt 219  Q
    |||||||    
T  155007 ttagttt 155013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 157790 - 157947
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccat 157889  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  157890 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 157947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 52767 - 52676
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 153  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||| ||||  ||||| ||||||| |||||| |||||||||||||||||||||    
T  52767 ttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 106; Significance: 9e-53; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 1008 - 1165
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  1008 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 1107  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||  ||| ||||||||||||||||||||||||||| |||| |||||||||    
T  1108 aaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagttt 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 8968 - 9125
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  8968 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 9067  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
    ||||||||||  ||| ||||||||||||||||||||||||||| |||| |||||||||    
T  9068 aaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagttt 9125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 928 - 956
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  928 aatataagcaaaaaagacaaacttttatc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 8888 - 8916
Alignment:
Q  13 aatataagcaaaaaagacaaacttttatc 41  Q
    |||||||||||||||||||||||||||||    
T  8888 aatataagcaaaaaagacaaacttttatc 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 40175 - 40321
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||| ||||||| || | ||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  40175 ttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctat 40274  T
Q  162 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttat 209  Q
    |||| || |||||||||||||||||||| ||||||| |||||||||||    
T  40275 aaaatttattccaaagaaaacacaaaaagctatact-caaattcttat 40321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 160246 - 160376
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||    
T  160246 ttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccat 160345  T
Q  162 aaaactttttccaaagaaaacacaaaaaact 192  Q
     ||  || |||||||||||||||||||||||    
T  160346 gaattttattccaaagaaaacacaaaaaact 160376  T

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Target: scaffold0565 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 6030 - 5907
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||    ||| |||||||||||||||||||||||||||||||| ||    
T  6030 aaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatt 5931  T
Q  172 ccaaagaaaacacaaaaaactata 195  Q
     ||| || ||||||||||||||||    
T  5930 tcaatgataacacaaaaaactata 5907  T

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Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 233652 - 233495
Alignment:
Q  62 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 161  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | |||||||||||||| |||||||||||||||| ||    
T  233652 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 233554  T
Q  162 aaaactttttccaaag-aaaacacaaaaaactatactccaaattcttatgttttagttt 219  Q
     |||||| ||  |||| |||||||||| |||||||    |||||||||| |||||||||    
T  233553 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttt 233495  T

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Target: scaffold0010 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 161053 - 160952
Alignment:
Q  93 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaact 192  Q
    ||||||| |||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||| |||| |||||| || ||| || ||||||| |||||    
T  161053 tcaatttgctctttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaact 160954  T
Q  193 at 194  Q
    ||    
T  160953 at 160952  T

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Target: scaffold1786 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 893 - 963
Alignment:
Q  112 attttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaac 182  Q
    ||||| |||||||||||||| ||||||||||| |||||| ||||| ||||||||||| |||||||||||||    
T  893 attttctccataaccaatagtcaatgaaaattatttttatatctttctataaaacttattccaaagaaaac 963  T

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Target: scaffold0330 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 3174 - 3296
Alignment:
Q  72 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttt 171  Q
    ||||||| ||||||| | ||||||||||  | | | ||||||||| || |||| |||   |||||| |||||||||||| ||||||||||||||||| ||    
T  3174 aaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatt 3273  T
Q  172 ccaaagaaaacacaaaaaactat 194  Q
     |||||| |||||||||||||||    
T  3274 tcaaagataacacaaaaaactat 3296  T

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Target: scaffold1157 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 1772 - 1690
Alignment:
Q  122 taaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 204  Q
    |||| |||| |||||||||| |||||||||||||||| || |||||  |||||| |||||||||| ||| |||| ||||||||    
T  1772 taacaaataaccaatgaaaaatgtttttacatcttcccatgaaactaattccaaggaaaacacaataaattataatccaaatt 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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