View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13070_high_22 (Length: 208)
Name: NF13070_high_22
Description: NF13070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13070_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 7559170 - 7559342
Alignment:
| Q |
19 |
cagagatagcagcaatagcaggtgggttaatctcaactcctgttataggttggtctctctacacactcaaaacaactggttgtggtcttccaccaggacc |
118 |
Q |
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| T |
7559170 |
cagagatagcagcaatagcaggtgggttaatctcaactcctgttataggttggtctctctacacactcaaaacaactggttgtggtcttccaccaggacc |
7559269 |
T |
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| Q |
119 |
aggtggatcaattggtgcattagaaggtgtaagttatcttgttgttgtgggcattgttgcttggtctatatat |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7559270 |
aggtggatcaattggtgcattagaaggtgtaagttatcttgttgttgtgggcattgttgcttggtctatatat |
7559342 |
T |
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