View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13073_low_1 (Length: 540)

Name: NF13073_low_1
Description: NF13073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13073_low_1
NF13073_low_1
[»] chr1 (17 HSPs)
chr1 (13-286)||(11611908-11612181)
chr1 (417-506)||(6750308-6750397)
chr1 (419-506)||(39001949-39002036)
chr1 (424-519)||(794902-794997)
chr1 (419-506)||(3695408-3695495)
chr1 (419-505)||(18808781-18808867)
chr1 (421-515)||(41998881-41998975)
chr1 (424-505)||(571650-571731)
chr1 (419-500)||(11121865-11121946)
chr1 (424-506)||(26653945-26654027)
chr1 (421-517)||(24909510-24909606)
chr1 (430-515)||(1585853-1585938)
chr1 (419-487)||(36290612-36290680)
chr1 (424-513)||(44272362-44272452)
chr1 (442-506)||(4792591-4792655)
chr1 (419-481)||(7409823-7409885)
chr1 (465-506)||(9224870-9224911)
[»] chr5 (18 HSPs)
chr5 (417-522)||(3729331-3729436)
chr5 (417-506)||(8159068-8159157)
chr5 (420-517)||(34766885-34766982)
chr5 (419-506)||(9793635-9793722)
chr5 (417-504)||(21583853-21583940)
chr5 (419-506)||(9793732-9793819)
chr5 (419-506)||(39508316-39508403)
chr5 (417-506)||(41929343-41929432)
chr5 (417-505)||(21020686-21020774)
chr5 (423-506)||(9913804-9913887)
chr5 (419-512)||(20736158-20736251)
chr5 (417-506)||(2068965-2069050)
chr5 (425-501)||(20815677-20815753)
chr5 (430-506)||(25081769-25081845)
chr5 (430-506)||(25139738-25139814)
chr5 (417-506)||(3711184-3711277)
chr5 (420-482)||(41910219-41910281)
chr5 (419-461)||(38451039-38451081)
[»] chr2 (24 HSPs)
chr2 (421-515)||(37060081-37060175)
chr2 (419-506)||(5958968-5959055)
chr2 (419-504)||(15070390-15070475)
chr2 (423-506)||(28107492-28107575)
chr2 (417-515)||(30609684-30609782)
chr2 (417-506)||(6974515-6974604)
chr2 (419-502)||(4382213-4382296)
chr2 (419-506)||(21423367-21423454)
chr2 (423-506)||(24475936-24476019)
chr2 (419-506)||(27004451-27004538)
chr2 (417-515)||(13274194-13274291)
chr2 (419-506)||(37802836-37802923)
chr2 (424-506)||(30393597-30393679)
chr2 (420-506)||(5807321-5807406)
chr2 (421-506)||(10217357-10217442)
chr2 (419-506)||(14786242-14786323)
chr2 (419-506)||(37140127-37140221)
chr2 (425-502)||(43022888-43022964)
chr2 (427-506)||(22194291-22194370)
chr2 (419-474)||(30757184-30757239)
chr2 (419-480)||(7747945-7748006)
chr2 (423-484)||(15431254-15431315)
chr2 (455-499)||(27404651-27404695)
chr2 (421-484)||(27969511-27969574)
[»] scaffold0306 (1 HSPs)
scaffold0306 (419-506)||(13056-13143)
[»] scaffold0152 (1 HSPs)
scaffold0152 (419-506)||(22184-22271)
[»] chr3 (15 HSPs)
chr3 (419-505)||(36404222-36404308)
chr3 (417-506)||(45602986-45603075)
chr3 (419-506)||(39391959-39392046)
chr3 (419-506)||(29360484-29360571)
chr3 (421-506)||(35534484-35534569)
chr3 (417-506)||(37115885-37115974)
chr3 (424-496)||(16353494-16353566)
chr3 (417-515)||(52742345-52742443)
chr3 (425-515)||(14201710-14201798)
chr3 (419-506)||(46487272-46487358)
chr3 (420-483)||(47599389-47599452)
chr3 (421-491)||(48644538-48644608)
chr3 (419-505)||(48944105-48944191)
chr3 (419-492)||(54882992-54883065)
chr3 (419-494)||(3618340-3618415)
[»] chr4 (14 HSPs)
chr4 (419-506)||(36609413-36609501)
chr4 (419-506)||(21555382-21555469)
chr4 (417-506)||(12701040-12701129)
chr4 (425-506)||(56100144-56100225)
chr4 (419-506)||(35929709-35929796)
chr4 (419-519)||(23249459-23249559)
chr4 (419-506)||(19598369-19598456)
chr4 (420-497)||(827840-827917)
chr4 (420-506)||(35749387-35749473)
chr4 (424-506)||(41842790-41842871)
chr4 (417-483)||(27733401-27733467)
chr4 (419-515)||(44243696-44243792)
chr4 (455-518)||(53584602-53584665)
chr4 (419-459)||(53583471-53583511)
[»] chr6 (10 HSPs)
chr6 (419-505)||(2814890-2814976)
chr6 (419-506)||(444523-444610)
chr6 (420-506)||(6200163-6200249)
chr6 (417-505)||(26393987-26394075)
chr6 (419-505)||(24640352-24640438)
chr6 (419-515)||(1067793-1067890)
chr6 (423-506)||(23774071-23774154)
chr6 (467-519)||(12324161-12324213)
chr6 (420-484)||(34710135-34710199)
chr6 (427-489)||(2993592-2993654)
[»] chr8 (18 HSPs)
chr8 (417-506)||(4623848-4623937)
chr8 (424-505)||(23403601-23403682)
chr8 (420-505)||(30204649-30204734)
chr8 (419-506)||(21567709-21567796)
chr8 (417-506)||(16655980-16656069)
chr8 (436-517)||(22798532-22798613)
chr8 (417-517)||(37629993-37630093)
chr8 (419-505)||(36470135-36470222)
chr8 (424-506)||(3001382-3001464)
chr8 (423-506)||(14842310-14842393)
chr8 (420-506)||(4234180-4234266)
chr8 (423-505)||(36046533-36046614)
chr8 (419-505)||(39436844-39436930)
chr8 (420-506)||(41787498-41787584)
chr8 (417-501)||(29958512-29958596)
chr8 (424-505)||(23275532-23275613)
chr8 (466-506)||(4414228-4414268)
chr8 (424-506)||(45310021-45310102)
[»] chr7 (9 HSPs)
chr7 (419-506)||(41326043-41326130)
chr7 (420-506)||(8163644-8163730)
chr7 (419-506)||(40337066-40337153)
chr7 (419-506)||(28089135-28089223)
chr7 (420-506)||(2362383-2362469)
chr7 (424-506)||(35589412-35589494)
chr7 (419-474)||(43403211-43403266)
chr7 (470-506)||(31637708-31637744)
chr7 (420-460)||(31637762-31637802)
[»] scaffold0302 (1 HSPs)
scaffold0302 (417-515)||(18501-18599)
[»] scaffold0532 (1 HSPs)
scaffold0532 (419-506)||(11321-11408)
[»] scaffold0025 (1 HSPs)
scaffold0025 (421-506)||(67874-67959)
[»] scaffold0140 (1 HSPs)
scaffold0140 (419-506)||(21478-21565)
[»] scaffold1248 (1 HSPs)
scaffold1248 (417-507)||(969-1059)
[»] scaffold0952 (1 HSPs)
scaffold0952 (417-507)||(1254-1344)
[»] scaffold0121 (1 HSPs)
scaffold0121 (419-505)||(37403-37489)


Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 13 - 286
Target Start/End: Original strand, 11611908 - 11612181
Alignment:
Q  13 aatatagcataccattcgacaaaagcattgaaatttacgtactgttatatttcatgggaacatacttcagcaccactttccttcctttgcattcattttt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11611908 aatatagcataccattcgacaaaagcattgaaatttacgtactgttatatttcatgggaacatacttcagcaccactttccttcctttgcattcattttt 11612007  T
Q  113 gacagaaatggcttttgagaggaaaacctatgcaaacagtgtcttttttgggcattgaaacaccttagagtgattaattaggaatgaattgttggtaata 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612008 gacagaaatggcttttgagaggaaaacctatgcaaacagtgtcttttttgggcattgaaacaccttagagtgattaattaggaatgaattgttggtaata 11612107  T
Q  213 atggcgttattgttaaagagtaattttcatgtgttccaacttctactctcctttatcatcagaaactgagaaac 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612108 atggcgttattgttaaagagtaattttcatgtgttccaacttctactctcctttatcatcagaaactgagaaac 11612181  T

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Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 6750308 - 6750397
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||| ||||| |||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6750308 gaggactaaaactaaaacatgtaaaaagataactattgtgaaaaagggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 6750397  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 39002036 - 39001949
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| ||||   | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39002036 ggactaaaactaaaacatgtaaaaggataactattgcaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 39001949  T

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Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 424 - 519
Target Start/End: Complemental strand, 794997 - 794902
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaatat 519  Q
    ||||||||||||||||||||||||| |||| |||||||| ||  |||||||||||||||||||||||||||| ||||||||||  || ||||||||    
T  794997 aaaactaaaacatgtaaaaggataactattgtgagaagaagacctgtatatttcaaaaactgaaaacaaaaaatatttcaaacatgccctaaatat 794902  T

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Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 3695495 - 3695408
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||| |||| ||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  3695495 ggactaaaactaaaacatgtaaaatgataactattatgaaaaggggacttgtatatttcaaaaaccgaaaacaaaaactatttcaaac 3695408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 419 - 505
Target Start/End: Complemental strand, 18808867 - 18808781
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| || |||||||||||| |||||||||||||||| |||||||||    
T  18808867 ggactaaaactaaaacatataaaaggataactattgtgagaagaagacttgtatatttcataaactgaaaacaaaaattatttcaaa 18808781  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 421 - 515
Target Start/End: Original strand, 41998881 - 41998975
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    |||||||||||||||| ||||| ||||| |||| |||||||| || |||||||||||||||| |||||||||||||||||||||||  |||||||    
T  41998881 actaaaactaaaacatataaaaagataaatattgtgagaagaagacttgtatatttcaaaaaatgaaaacaaaaactatttcaaacaggctctaa 41998975  T

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Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 571731 - 571650
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    ||||||||||||||||||| ||||| |||| |||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  571731 aaaactaaaacatgtaaaatgataactattatgagaagaggacgtatatatttcaaaaactgaaaacaaaaactatttcaaa 571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 419 - 500
Target Start/End: Complemental strand, 11121946 - 11121865
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatt 500  Q
    |||||||||||||||||||||||| ||||| |||| || ||||| || ||||||||||||||||||||||||||||||||||    
T  11121946 ggactaaaactaaaacatgtaaaatgataactattgtgcgaagatgacttgtatatttcaaaaactgaaaacaaaaactatt 11121865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 26653945 - 26654027
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||| ||||||||||||||||||||  ||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  26653945 aaaattaaaacatgtaaaaggataaccattgtgagaagaggacctgtatatttcaaaaattgaaaacaaaaactatttcaaac 26654027  T

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Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 517
Target Start/End: Original strand, 24909510 - 24909606
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaat 517  Q
    |||||||| |||| |||||||||||||| |||| ||||||||| | | |||||||| |||||||||||| ||||||||||||||||  |||||||||    
T  24909510 actaaaacgaaaatatgtaaaaggataactattgtgagaagagaactagtatattttaaaaactgaaaataaaaactatttcaaacaggctctaaat 24909606  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 515
Target Start/End: Complemental strand, 1585938 - 1585853
Alignment:
Q  430 aaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    ||||||||||||||||||| |||| | |||||| || |||||||||||||||||| |||||| ||||||||||||||  |||||||    
T  1585938 aaaacatgtaaaaggataactattgtaagaagaagacttgtatatttcaaaaactaaaaacataaactatttcaaacaggctctaa 1585853  T

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Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 36290680 - 36290612
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaa 487  Q
    |||||||||||||||||||||||| ||||| |||| | ||||||||| |||||||||||||||||||||    
T  36290680 ggactaaaactaaaacatgtaaaatgataactattgtcagaagaggacttgtatatttcaaaaactgaa 36290612  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 424 - 513
Target Start/End: Original strand, 44272362 - 44272452
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaa-actgaaaacaaaaactatttcaaacgagctct 513  Q
    |||||||||||||||||||  ||||  ||| ||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  44272362 aaaactaaaacatgtaaaataataaccattatgaaaagagaacttgtatatttcaaaaaactgaaaacaaaaactatttcaaacaagctct 44272452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 442 - 506
Target Start/End: Original strand, 4792591 - 4792655
Alignment:
Q  442 aggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||| |||| ||||||||| | |||||||||||||||||| |||||||||||||||| ||||    
T  4792591 aggataactattgtgagaagagaacttgtatatttcaaaaactaaaaacaaaaactattttaaac 4792655  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 419 - 481
Target Start/End: Original strand, 7409823 - 7409885
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaa 481  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| | |  ||||||||||||    
T  7409823 ggactaaaactaaaacatgtaaaaggataactattatgagaagagaactattatatttcaaaa 7409885  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 506
Target Start/End: Original strand, 9224870 - 9224911
Alignment:
Q  465 atttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  9224870 atttgtgtatttcaaaaactgaaaacaaaaactatttcaaac 9224911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 417 - 522
Target Start/End: Original strand, 3729331 - 3729436
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaa 516  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  3729331 gaggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctctaaa 3729430  T
Q  517 tatcct 522  Q
    ||||||    
T  3729431 tatcct 3729436  T

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Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 8159068 - 8159157
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  8159068 gaggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaac 8159157  T

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Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 420 - 517
Target Start/End: Original strand, 34766885 - 34766982
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaat 517  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  34766885 gactaaaactaaaacatgtaaaagaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaacaggctctaaat 34766982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 9793635 - 9793722
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9793635 ggactaaaactaaaacatgtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 9793722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 417 - 504
Target Start/End: Complemental strand, 21583940 - 21583853
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaa 504  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  21583940 gaggactaaaactaaaacatgtaaaaagataactattatgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaa 21583853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 9793732 - 9793819
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||| |||||||||||| |||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9793732 ggactaaaactaaaacaagtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 9793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 39508316 - 39508403
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||||| |||| |||| |||||| | || ||||||||||||||||||||||||||||||||||||||||    
T  39508316 ggactaaaactaaaacatgtaaaagaataactattgtgagaaaaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 39508403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 41929432 - 41929343
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||||| ||||  || ||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  41929432 gaggactaaaactaaaacatgtaaaaggataactattgcgaaaagagaacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 41929343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 21020774 - 21020686
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||| ||| ||||||||||| ||||  ||||||| || || ||||||||||||||||||||||||||||||||||||    
T  21020774 gaggactaaaactaaatcatataaaaggataactattgcgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaa 21020686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 423 - 506
Target Start/End: Complemental strand, 9913887 - 9913804
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||| ||||| |||| ||||| ||| | |||||||||||||||||| |||||||||||||||||||||    
T  9913887 taaaactaaaacatgtaaaaagataactattatgagatgagaacttgtatatttcaaaaactaaaaacaaaaactatttcaaac 9913804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 419 - 512
Target Start/End: Original strand, 20736158 - 20736251
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctc 512  Q
    |||||||||||||||||||||||| ||||| |||| ||| | ||||| || ||| ||||||||| ||||||||||||||||||||||| |||||    
T  20736158 ggactaaaactaaaacatgtaaaatgataactattgtgaaaggaggacttatatttttcaaaaattgaaaacaaaaactatttcaaacaagctc 20736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 2069050 - 2068965
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||  |||| ||||| |||| |||||||| || ||  ||||||||||||||||||||||||||||||||||||    
T  2069050 gaggactaaaactaaaacat--aaaaagataaatattgtgagaagaagactt--atatttcaaaaactgaaaacaaaaactatttcaaac 2068965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 20815753 - 20815677
Alignment:
Q  425 aaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactattt 501  Q
    |||| ||||||| ||||| ||||| |||| |||||| |||| |||||||||| ||||||||||||||||||||||||    
T  20815753 aaacaaaaacatataaaatgataactattgtgagaaaaggacttgtatattttaaaaactgaaaacaaaaactattt 20815677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 25081845 - 25081769
Alignment:
Q  430 aaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||| ||||| ||||| |||| |||||||| |  ||||||||||||||| ||||||||||||||||||||||||    
T  25081845 aaaacatataaaatgataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaac 25081769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 25139814 - 25139738
Alignment:
Q  430 aaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||| ||||| ||||| |||| |||||||| |  ||||||||||||||| ||||||||||||||||||||||||    
T  25139814 aaaacatataaaatgataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaac 25139738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 3711277 - 3711184
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttg----tatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||| |||| ||||||||||||||| ||||| |||| ||| || || | |||    |||||||||||||||||||||||||||||||||||||    
T  3711277 gaggattaaatctaaaacatgtaaaaagataactattgtgaaaatagaacttgtatatatatttcaaaaactgaaaacaaaaactatttcaaac 3711184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 482
Target Start/End: Original strand, 41910219 - 41910281
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaa 482  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||| |||||||||| |||||    
T  41910219 gactaaaactaaaacatgtaaaatgataactattgtgaaaagaggacttgtatattttaaaaa 41910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 461
Target Start/End: Original strand, 38451039 - 38451081
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaag 461  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  38451039 ggactaaaactaaaacatgtaaaaggataactattgtgagaag 38451081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 421 - 515
Target Start/End: Original strand, 37060081 - 37060175
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  37060081 actaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctctaa 37060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 5959055 - 5958968
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5959055 ggactaaaactaaaacatgtaaaaggataactattacgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 5958968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 419 - 504
Target Start/End: Original strand, 15070390 - 15070475
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaa 504  Q
    |||||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15070390 ggactaaaacaaaaacatataaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaa 15070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 423 - 506
Target Start/End: Original strand, 28107492 - 28107575
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  28107492 taaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaattgtttcaaac 28107575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 515
Target Start/End: Original strand, 30609684 - 30609782
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||| || ||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  30609684 gaggactaaaactaaaacatgtaaaatgataactattgtgagaagaagacttgtatatttcaataactgaaaacaaaaacgatttcaaacgggctctaa 30609782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 6974515 - 6974604
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  6974515 gaggactaaaactaaaacatgtaaaatgataactattgtgagaagagcacttatatatttcaaaaactgaaaacaaaaactatttcaaac 6974604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 502
Target Start/End: Complemental strand, 4382296 - 4382213
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttc 502  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  4382296 ggactaaaactaaaacatgtaaaatgataactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttc 4382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 21423454 - 21423367
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||| ||||||| |||| ||||| || || ||||||||||||||||||||||||||||||||||||||||    
T  21423454 ggactaaaactaaaacatgtaataggataactattgtgagatgaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 21423367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 423 - 506
Target Start/End: Original strand, 24475936 - 24476019
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||| ||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  24475936 taaaactaaaacatgtaaaaagataactattgtgataagaagatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 24476019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 27004538 - 27004451
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  27004538 ggactaaaactaaaacatataaaaggataactattgtgagaagaggacttatatatttcaaaaattgaaaacaaaaactatttcaaac 27004451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 417 - 515
Target Start/End: Complemental strand, 13274291 - 13274194
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||  |||||||    
T  13274291 gaggactaaaactaaaacatgtaaaag-ataactattgtgagaagaggacttgtatatttcaaaaattaaaaacaaaaactatttcaaacaggctctaa 13274194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 37802836 - 37802923
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||| |||| |||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  37802836 ggactaaaactaaaacatgtaaaaagataaatattatgagaagaagacttgtatatttcaaaaatttaaaacaaaaactatttcaaac 37802923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 30393597 - 30393679
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||  ||| | | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30393597 aaaactaaaacatgtaaaaggataaccattatcaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 30393679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 5807321 - 5807406
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||| ||||||||||| |||| ||| ||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  5807321 gactaaaactaaaacatataaaaggataactattgtgaaaagggaatttgtatatttcaaaaactg-aaacaaaaactatttcaaac 5807406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 506
Target Start/End: Original strand, 10217357 - 10217442
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||| |||| |||| | | ||| | | ||||||||||||||||||||||| ||||||||||||||||    
T  10217357 actaaaactaaaacatgtaaaagaataactattctaaaaagggaacttgtatatttcaaaaactgaaaataaaaactatttcaaac 10217442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 14786323 - 14786242
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||||||      ||||||||||||||||||||||    
T  14786323 ggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttca------gaaaacaaaaactatttcaaac 14786242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 37140127 - 37140221
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataatt-------attttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||| |       |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37140127 ggactaaaactaaaacatgtaaaatgataagtgataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 37140221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 425 - 502
Target Start/End: Original strand, 43022888 - 43022964
Alignment:
Q  425 aaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttc 502  Q
    |||||||||||| ||||||||||||||| | |||||||||| |||||||||| ||||||| |||||||||| ||||||    
T  43022888 aaactaaaacatataaaaggataattatgt-gagaagaggacttgtatattttaaaaactaaaaacaaaaattatttc 43022964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 427 - 506
Target Start/End: Original strand, 22194291 - 22194370
Alignment:
Q  427 actaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||| ||||| |||| | | || |||| |||||||||||||||||  |||||||||||||||||||||    
T  22194291 actaaaacatgtaaaatgataactattataaaaaaaggacttgtatatttcaaaaaccaaaaacaaaaactatttcaaac 22194370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 474
Target Start/End: Original strand, 30757184 - 30757239
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatat 474  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  30757184 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatat 30757239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 480
Target Start/End: Original strand, 7747945 - 7748006
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaa 480  Q
    |||||||||||||||||||||||| ||||| | || | ||||||||| ||||||||||||||    
T  7747945 ggactaaaactaaaacatgtaaaatgataactcttgtaagaagaggacttgtatatttcaaa 7748006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 15431315 - 15431254
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaact 484  Q
    |||||||||||||||||||||||||| ||||  | ||||||||  |||||||||||||||||    
T  15431315 taaaactaaaacatgtaaaaggataactattacgggaagaggacatgtatatttcaaaaact 15431254  T

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Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 499
Target Start/End: Original strand, 27404651 - 27404695
Alignment:
Q  455 tgagaagaggatttgtatatttcaaaaactgaaaacaaaaactat 499  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  27404651 tgagaagaggacttgtatatttcaaaaactaaaaacaaaaactat 27404695  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 484
Target Start/End: Complemental strand, 27969574 - 27969511
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaact 484  Q
    ||||||| |||||||| ||||||||||| |||| ||||||| | | ||||||||||||||||||    
T  27969574 actaaaattaaaacatataaaaggataactattgtgagaagtgaacttgtatatttcaaaaact 27969511  T

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Target: scaffold0306 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 13056 - 13143
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13056 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 13143  T

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Target: scaffold0152 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 22271 - 22184
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22271 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 22184  T

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Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 36404222 - 36404308
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36404222 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 36404308  T

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Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 45603075 - 45602986
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||    
T  45603075 gaggactaaaactaaaacatgtaaaaggataactattgtgataagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 45602986  T

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Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 39392046 - 39391959
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||  | ||||||||||||||||||||||||||||||||||||||||    
T  39392046 ggactaaaactaaaacatgtaaaaggataactattgtgaaaagaaaacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 39391959  T

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Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 29360571 - 29360484
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| ||||| | ||||||||    
T  29360571 ggactaaaactaaaacatgtaaaaggataactactgtgagaagaggacttgtatatttcaaaaactgaaaagaaaaattgtttcaaac 29360484  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 421 - 506
Target Start/End: Complemental strand, 35534569 - 35534484
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||| ||||| ||||| |||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  35534569 actaaaactaaaacatataaaatgataactattgtgagaagaagacttgtatatttcaaaaactgaaaacaaaaactattttaaac 35534484  T

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Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 37115885 - 37115974
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||| ||||| ||||| ||||  ||||||| || || |||||||||||||||||||||||||||||||||||||    
T  37115885 gaggactaaaactaaaacatataaaatgataactattgcgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaac 37115974  T

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Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 424 - 496
Target Start/End: Original strand, 16353494 - 16353566
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaac 496  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  16353494 aaaactaaaacatgtaaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaac 16353566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 515
Target Start/End: Complemental strand, 52742443 - 52742345
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    ||||| ||||||||||| |||||||| ||||| ||||  || ||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  52742443 gaggattaaaactaaaatatgtaaaatgataactattgcgataagagaatttgtatatttcaaaaactggaaacaaaaactatttcaaacaggctctaa 52742345  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 14201798 - 14201710
Alignment:
Q  425 aaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    ||||||||||||||||||| |||| |||| ||| ||||||| ||  ||||||||||||||||||||||||||||||||||||  |||||||    
T  14201798 aaactaaaacatgtaaaagaataactattgtgaaaagaggactt--atatttcaaaaactgaaaacaaaaactatttcaaacaggctctaa 14201710  T

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Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 46487358 - 46487272
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||| ||||| ||||| |||| |||||||| || || |||||||||||||||||||| ||||||||||||||||    
T  46487358 ggactaaaactaaaacatataaaatgataactattgtgagaagaagacttatatatttcaaaaactgaaaa-aaaaactatttcaaac 46487272  T

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Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 483
Target Start/End: Complemental strand, 47599452 - 47599389
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaac 483  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  47599452 gactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatattttaaaaac 47599389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 48644608 - 48644538
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaaca 491  Q
    |||||||||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||||||    
T  48644608 actaaaactaaaacatgtaaaatgataaatattgtgagaagatgatttgtatatttcaaaaattgaaaaca 48644538  T

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Target: chr3; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 48944105 - 48944191
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||| ||||||||||||| ||||| |||| | ||||||||| ||||||||||||||| || |||| |||||||||||||||    
T  48944105 ggactaaaacaaaaacatgtaaaatgataactattgtaagaagaggacttgtatatttcaaaagctaaaaagaaaaactatttcaaa 48944191  T

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Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 419 - 492
Target Start/End: Original strand, 54882992 - 54883065
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaa 492  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||| || |||||||||||||| ||||||||    
T  54882992 ggactaaaactaaaacacgtaaaaggataaatattgtgagaagaggacttctatatttcaaaaaccgaaaacaa 54883065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 419 - 494
Target Start/End: Original strand, 3618340 - 3618415
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaa 494  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||  | |||||||||||| |||||||||||||||    
T  3618340 ggactaaaactaaaacatgtaaaaagataaatattgtgagaagaaaacttgtatatttcagaaactgaaaacaaaa 3618415  T

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Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 36609413 - 36609501
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactg-aaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36609413 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaaacaaaaactatttcaaac 36609501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 21555469 - 21555382
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| |||||||| || || |||||||||||||||||||||||||||||||||||||    
T  21555469 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaac 21555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 12701129 - 12701040
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||||||| |||| |||| | |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  12701129 gaggactaaaactaaaacatgtaaaagaataactattgtaagaagaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 12701040  T

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Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 56100144 - 56100225
Alignment:
Q  425 aaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  56100144 aaactaaaacatgtaaaaggataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 56100225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 35929796 - 35929709
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||| ||||| ||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  35929796 ggactaaaactaaaacatataaaatgataactattgtgagaagaggacttatatatttcaaaaactgaaaacaaaaactatttcaaac 35929709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 419 - 519
Target Start/End: Complemental strand, 23249559 - 23249459
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaata 518  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||| ||||||||||| | ||||||||  |||||| |||    
T  23249559 ggactaaaactaaaacatgtaaaaggataactattgtgagaagagggcttgtatatttcaaaaaccgaaaacaaaaattgtttcaaacaggctctagata 23249460  T
Q  519 t 519  Q
    |    
T  23249459 t 23249459  T

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Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 19598456 - 19598369
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| || || ||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||    
T  19598456 ggactaaaactaaaacatgtaaaaagaaaactattttgagaaaatgacttgtatatttcgaaaactgaaaacaaaaactatttcaaac 19598369  T

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Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 420 - 497
Target Start/End: Complemental strand, 827917 - 827840
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaact 497  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  827917 gactaaaactaaaacatgtaaaaagataactattgtgagaagaggacttgtatatttcaaaaaccgaaaacaaaaact 827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 506
Target Start/End: Complemental strand, 35749473 - 35749387
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||| ||||| |||||||||| |||||||| || |||||||||||||||| |||||| ||||| ||||||||||    
T  35749473 gactaaaactaaaacatataaaaagataattattatgagaagatgacttgtatatttcaaaaattgaaaataaaaattatttcaaac 35749387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 506
Target Start/End: Complemental strand, 41842871 - 41842790
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||| ||||  ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  41842871 aaaactaaaacatgtaaaag-ataacaattgtgagaaaaggatttgtatatttcaaaaaccgaaaacaaaaactatttcaaac 41842790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 27733467 - 27733401
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaac 483  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||||||||||    
T  27733467 gaggactaaaactaaaacatgtaaaaggataactattgtgagaagaggtcttgtatatttcaaaaac 27733401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 419 - 515
Target Start/End: Original strand, 44243696 - 44243792
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    ||||||||| |||||||| ||||||||||| |||| | |||||| || |||||||||||||||||| |||||||||  ||||||||||  |||||||    
T  44243696 ggactaaaattaaaacatataaaaggataactattgtaagaagatgacttgtatatttcaaaaactaaaaacaaaatttatttcaaacaggctctaa 44243792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 53584602 - 53584665
Alignment:
Q  455 tgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaata 518  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  53584602 tgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaacatgctctaaata 53584665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 53583471 - 53583511
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgaga 459  Q
    |||||||||||||||||||||||||||| | |||| |||||    
T  53583471 ggactaaaactaaaacatgtaaaaggattactattgtgaga 53583511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 2814890 - 2814976
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2814890 ggactaaaactaaaacatgtaaaatgataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 2814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 444610 - 444523
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  444610 ggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactattttaaac 444523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 6200163 - 6200249
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  6200163 gactaaaactaaaatatgtaaaaggataactattgtgagaagagaatttgtatatttcaaaaactgaaaacaaaaaatatttcaaac 6200249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 417 - 505
Target Start/End: Original strand, 26393987 - 26394075
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||||||||||| ||||| ||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  26393987 gaggactaaaactaaaacatgtaaaatgataaatattgcgagaagaagatttttatatttcaaaaactgaaaacaaaaactatttcaaa 26394075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 24640352 - 24640438
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||| || |||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  24640352 ggactaaaactaaaacatatagaaggataactattatgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 24640438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 515
Target Start/End: Complemental strand, 1067890 - 1067793
Alignment:
Q  419 ggactaaaactaaaacatgtaaaa-ggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    |||||||||||||||||| ||||| || ||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1067890 ggactaaaactaaaacatataaaaagggtaactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaagctctaa 1067793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 423 - 506
Target Start/End: Complemental strand, 23774154 - 23774071
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||| ||||||||||| |||| ||||||||| | |||||||||||||||| | |||| ||||||||||||||||    
T  23774154 taaaactaaaacatataaaaggataactattatgagaagagaacttgtatatttcaaaaattaaaaataaaaactatttcaaac 23774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 519
Target Start/End: Complemental strand, 12324213 - 12324161
Alignment:
Q  467 ttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaatat 519  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  12324213 ttgtatatttcaaaaactgaaaacaaaaactacttcaaacaggctctaaatat 12324161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 484
Target Start/End: Complemental strand, 34710199 - 34710135
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaact 484  Q
    ||||||||||||||||| |||||| |||| || | ||||||||| | ||||||||||||||||||    
T  34710199 gactaaaactaaaacatataaaagaataactactgtgagaagagaacttgtatatttcaaaaact 34710135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 489
Target Start/End: Original strand, 2993592 - 2993654
Alignment:
Q  427 actaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaa 489  Q
    ||||||| || ||||||||||| |||| ||||||||| | |||||||||||||||||| ||||    
T  2993592 actaaaagatataaaaggataactattgtgagaagagaacttgtatatttcaaaaactaaaaa 2993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 4623848 - 4623937
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| || || |||||||||||||||||||||||||||||||||||||    
T  4623848 gaggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaac 4623937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 23403682 - 23403601
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23403682 aaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 23403601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 420 - 505
Target Start/End: Original strand, 30204649 - 30204734
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    ||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  30204649 gactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 30204734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 21567796 - 21567709
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21567796 ggactaaaactaaaacatgtaaaaagataactattgtaagaagaggatttgtatatttctaaaactgaaaacaaaaactatttcaaac 21567709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 16656069 - 16655980
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||| |  |||||||||| |||||||||||||||||||||||||||||    
T  16656069 gaggactaaaactaaaacatgtaaaatgataactattgtgagaagaaggcttgtatattttaaaaactgaaaacaaaaactatttcaaac 16655980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 22798613 - 22798532
Alignment:
Q  436 tgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaat 517  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  22798613 tgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctctaaat 22798532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 517
Target Start/End: Complemental strand, 37630093 - 37629993
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaaa 516  Q
    |||||||||||||||||||||||||||| ||| ||||  |||||||||  || ||||||| |||||||||||||||||||||||||||||  ||||||||    
T  37630093 gaggactaaaactaaaacatgtaaaaggctaactattgcgagaagagggcttatatatttaaaaaactgaaaacaaaaactatttcaaacaggctctaaa 37629994  T
Q  517 t 517  Q
    |    
T  37629993 t 37629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 36470135 - 36470222
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactg-aaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||| |||||||||| |||||||||    
T  36470135 ggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaaacaaaaattatttcaaa 36470222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 3001382 - 3001464
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  3001382 aaaactaaaacatgtaaaaagataaccattgtgagaagaggacttgtatatttcaaaaactgaaaataaaaactatttcaaac 3001464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 423 - 506
Target Start/End: Complemental strand, 14842393 - 14842310
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||| |||||||| ||||| |||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14842393 taaaactaaaatatgtaaaatgataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaattatttcaaac 14842310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 506
Target Start/End: Complemental strand, 4234266 - 4234180
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||| |||||||||||||||||||| ||| ||||  ||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  4234266 gactcaaactaaaacatgtaaaaggctaactattgcgagaagatgacttgtatatttcaaaaactgaaaacaaaaactattttaaac 4234180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 423 - 505
Target Start/End: Original strand, 36046533 - 36046614
Alignment:
Q  423 taaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||||||||||| |||| ||| |||  |||||||||||||||||||||| |||||||||||||||||||    
T  36046533 taaaactaaaacatgtaaaaggataactattgtgaaaaggagatttgtatatttcaaaaactg-aaacaaaaactatttcaaa 36046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 419 - 505
Target Start/End: Complemental strand, 39436930 - 39436844
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||| |||||  |||| |||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  39436930 ggactaaaactaaaacatataaaaaaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaattatttcaaa 39436844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 506
Target Start/End: Complemental strand, 41787584 - 41787498
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||| |||| ||||||| |||||||||||||||||||||||| ||||    
T  41787584 gactaaaactaaaacatgtaaaaagataactattgtaagaagagaatttatatattttaaaaactgaaaacaaaaactattttaaac 41787498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 417 - 501
Target Start/End: Original strand, 29958512 - 29958596
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactattt 501  Q
    ||||| |||||||||||||||||||||||||| |||| | | |||| || ||||||||||||||||||||||||||||| |||||    
T  29958512 gaggattaaaactaaaacatgtaaaaggataactattgtaataagatgacttgtatatttcaaaaactgaaaacaaaaattattt 29958596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 23275532 - 23275613
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    |||||||||||||||||||| |||| ||   | | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  23275532 aaaactaaaacatgtaaaagaataactaccgtaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 23275613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 4414268 - 4414228
Alignment:
Q  466 tttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4414268 tttgtatatttcaaaaactgaaaacaaaaactatttcaaac 4414228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 45310021 - 45310102
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||| ||||||||||||| | ||||  ||| ||| ||||| | |||||||||||||||| |||||||||||||||||||||||    
T  45310021 aaaaataaaacatgtaaa-gaataaccattatgaaaagagaacttgtatatttcaaaaattgaaaacaaaaactatttcaaac 45310102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 41326130 - 41326043
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  41326130 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaagatttatatatttcaaaaactcaaaacaaaaactatttcaaac 41326043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 8163644 - 8163730
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  8163644 gactaaaactaaaacatgtaaaaagataactattgtgagaagagaacttgtatatttcaaaaacagaaaacaaaaactatttcaaac 8163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 40337066 - 40337153
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||| |||| |||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  40337066 ggactaaaactaaaacatgtaaaatgataactattgtgagaagatgacttgcatatttcgaaaactgaaaacaaaaactatttcaaac 40337153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 28089223 - 28089135
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactg-aaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||| ||||| |||| | |||||| |||||||||||||||||||||| |||||||||| | ||||||||    
T  28089223 ggactaaaactaaaacatgtaaaatgataactattgtaagaagatgatttgtatatttcaaaaactgaaaaacaaaaattgtttcaaac 28089135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 2362383 - 2362469
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||| | |||||| ||||| |||| |||||||| ||||||||||||| |||||||||||||||||| | ||||||||    
T  2362383 gactaaaactaaaataagtaaaatgataactattgtgagaagaagatttgtatattttaaaaactgaaaacaaaaattgtttcaaac 2362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 35589412 - 35589494
Alignment:
Q  424 aaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||| || ||||||||||| |||| ||| ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  35589412 aaaactaaaatatataaaaggataactattatgaaaagaggacttgtatatttcaaaaatcgaaaacaaaaactatttcaaac 35589494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 474
Target Start/End: Original strand, 43403211 - 43403266
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatat 474  Q
    ||||||||||||||| |||||||||||||| |||| ||| ||||||| ||||||||    
T  43403211 ggactaaaactaaaatatgtaaaaggataactattatgataagaggacttgtatat 43403266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 506
Target Start/End: Complemental strand, 31637744 - 31637708
Alignment:
Q  470 tatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  31637744 tatattttaaaaactgaaaacaaaagctatttcaaac 31637708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 31637802 - 31637762
Alignment:
Q  420 gactaaaactaaaacatgtaaaaggataattattttgagaa 460  Q
    ||||||||||||||||| ||||||||||| |||| ||||||    
T  31637802 gactaaaactaaaacatataaaaggataactattatgagaa 31637762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 515
Target Start/End: Original strand, 18501 - 18599
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacgagctctaa 515  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||| ||| |||||||||||||||||  |||||||    
T  18501 gaggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactaaaaccaaaaactatttcaaacaggctctaa 18599  T

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Target: scaffold0532 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 11408 - 11321
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||| ||||||||| ||||||||| || | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11408 ggactaaaacaaaaacatgttaaaggataactactctgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 11321  T

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Target: scaffold0025 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 421 - 506
Target Start/End: Complemental strand, 67959 - 67874
Alignment:
Q  421 actaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    |||||||||||||||||||||||||||| |||| | ||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  67959 actaaaactaaaacatgtaaaaggataactattgttagaagaggacttgtatattttaaaaactgaaaacaaaaattatttcaaac 67874  T

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Target: scaffold0140 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 506
Target Start/End: Complemental strand, 21565 - 21478
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 506  Q
    ||||||||||||||||||||||||  |||| |||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  21565 ggactaaaactaaaacatgtaaaataataactattgtgagaagatgatttatatatttcaaaaactgaaaacaaaaactgtttcaaac 21478  T

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Target: scaffold1248 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 507
Target Start/End: Complemental strand, 1059 - 969
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacg 507  Q
    |||||||||||||||||||| |||||| |||| ||||  ||||| | || |||||||||| ||||||||||||||||||||||||||||||    
T  1059 gaggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaacg 969  T

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Target: scaffold0952 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 507
Target Start/End: Original strand, 1254 - 1344
Alignment:
Q  417 gaggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacg 507  Q
    |||||||||||||||||||| |||||| |||| ||||  ||||| | || |||||||||| ||||||||||||||||||||||||||||||    
T  1254 gaggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaacg 1344  T

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Target: scaffold0121 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 37403 - 37489
Alignment:
Q  419 ggactaaaactaaaacatgtaaaaggataattattttgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 505  Q
    ||||||||||||||| |||||||| ||||| ||||  |||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  37403 ggactaaaactaaaatatgtaaaatgataactattgcgagaagaggacttgtatatttcaaaaaccgaaaacaaacactatttcaaa 37489  T

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