View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13075_low_25 (Length: 321)
Name: NF13075_low_25
Description: NF13075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13075_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 7946407 - 7946696
Alignment:
| Q |
18 |
tcttgcacatttagcagtacacaaaactgatgaaaaagacatagctggtgaatctataaaaactgctggtcatgttgaatcttttagagctccaagtgga |
117 |
Q |
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| T |
7946407 |
tcttgcacatttagcagtacacaaaactgatgaaaaagacatagctggtgaatctataaaaactgctggtcatgttgaatcttttagagctccaagtgga |
7946506 |
T |
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| Q |
118 |
agttcatttgcagctgaaagggcataatagtagctacaa-atggccatacaacagactatgggatttcactcaaaagattgtcctgccnnnnnnnnnntg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |
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| T |
7946507 |
agttcatttgcagctgaaagggcataatagtagctacaatatggccatacaacagactattggatttcactcaaaagattgtcctgcc--aaaaaaaatg |
7946604 |
T |
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| Q |
217 |
tgcttagggtataattctgtttgtgtaaaatgtcctaccattaaatgtttaggctttagtgattttcttttcggattggaatcaggatccct |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
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| T |
7946605 |
tgcttagggtataattctgtttgtgtaaaatgtcctactattaaatgtttaggatttagtgattttctttttggattggaatcaggatccct |
7946696 |
T |
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