View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13075_low_4 (Length: 611)

Name: NF13075_low_4
Description: NF13075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13075_low_4
NF13075_low_4
[»] chr5 (44 HSPs)
chr5 (15-359)||(1759786-1760136)
chr5 (437-611)||(1759534-1759708)
chr5 (215-328)||(35653252-35653364)
chr5 (226-331)||(43414072-43414176)
chr5 (215-328)||(25017288-25017400)
chr5 (220-328)||(5151489-5151596)
chr5 (219-326)||(16315535-16315639)
chr5 (215-328)||(39567903-39568015)
chr5 (219-331)||(4421965-4422076)
chr5 (216-328)||(8410142-8410253)
chr5 (222-328)||(12068178-12068283)
chr5 (223-324)||(34546782-34546882)
chr5 (221-308)||(27823279-27823365)
chr5 (222-327)||(3639079-3639182)
chr5 (215-328)||(28143120-28143232)
chr5 (215-324)||(35945250-35945358)
chr5 (215-319)||(1479133-1479236)
chr5 (240-328)||(13951258-13951345)
chr5 (215-328)||(338761-338873)
chr5 (215-328)||(4962514-4962625)
chr5 (230-331)||(25568304-25568404)
chr5 (215-283)||(15915876-15915944)
chr5 (215-323)||(37243852-37243958)
chr5 (222-327)||(10017626-10017727)
chr5 (241-327)||(12914176-12914261)
chr5 (20-133)||(1738973-1739080)
chr5 (17-83)||(1744360-1744426)
chr5 (239-324)||(6823773-6823858)
chr5 (220-327)||(27535098-27535202)
chr5 (247-331)||(39693007-39693090)
chr5 (15-63)||(1724448-1724496)
chr5 (241-331)||(10406785-10406873)
chr5 (285-331)||(4838278-4838324)
chr5 (246-327)||(16899599-16899680)
chr5 (235-313)||(3015067-3015144)
chr5 (282-327)||(39335474-39335519)
chr5 (241-324)||(28599677-28599759)
chr5 (233-312)||(39042050-39042128)
chr5 (215-296)||(40099363-40099443)
chr5 (215-265)||(104926-104976)
chr5 (220-313)||(17168691-17168783)
chr5 (240-313)||(39069298-39069370)
chr5 (235-272)||(39167650-39167687)
chr5 (221-313)||(678465-678556)
[»] chr4 (48 HSPs)
chr4 (215-328)||(35808393-35808505)
chr4 (215-328)||(55669739-55669851)
chr4 (215-327)||(2362630-2362743)
chr4 (215-324)||(26040357-26040465)
chr4 (222-331)||(32131139-32131247)
chr4 (222-327)||(34016626-34016730)
chr4 (215-328)||(41956210-41956322)
chr4 (215-331)||(10100110-10100225)
chr4 (216-328)||(23765578-23765689)
chr4 (222-328)||(51266924-51267029)
chr4 (215-328)||(27839303-27839415)
chr4 (215-328)||(34316719-34316832)
chr4 (215-328)||(45688743-45688855)
chr4 (216-328)||(31754938-31755049)
chr4 (223-331)||(33951697-33951804)
chr4 (223-327)||(30475426-30475529)
chr4 (215-328)||(26831783-26831894)
chr4 (228-328)||(20811263-20811362)
chr4 (215-327)||(31168135-31168246)
chr4 (240-328)||(19328950-19329037)
chr4 (222-328)||(50514618-50514722)
chr4 (248-328)||(47188695-47188774)
chr4 (216-320)||(54339121-54339223)
chr4 (221-283)||(19876186-19876248)
chr4 (234-327)||(52341602-52341694)
chr4 (215-327)||(35675187-35675298)
chr4 (219-327)||(29462802-29462909)
chr4 (216-328)||(40436081-40436192)
chr4 (215-283)||(51290474-51290542)
chr4 (216-328)||(53566948-53567062)
chr4 (216-282)||(46695960-46696026)
chr4 (221-326)||(13498120-13498224)
chr4 (216-283)||(9693380-9693446)
chr4 (215-306)||(31487743-31487833)
chr4 (222-303)||(35511184-35511264)
chr4 (234-325)||(3769816-3769906)
chr4 (246-327)||(45088071-45088148)
chr4 (282-328)||(9693534-9693580)
chr4 (219-323)||(30617954-30618057)
chr4 (235-303)||(52895749-52895816)
chr4 (244-327)||(15986267-15986349)
chr4 (215-265)||(16559991-16560041)
chr4 (226-328)||(20456569-20456670)
chr4 (238-324)||(35927294-35927379)
chr4 (235-313)||(36486703-36486780)
chr4 (235-313)||(55120106-55120183)
chr4 (219-248)||(19328748-19328777)
chr4 (222-323)||(48513624-48513724)
[»] chr1 (47 HSPs)
chr1 (215-328)||(34874567-34874679)
chr1 (215-328)||(932151-932263)
chr1 (215-328)||(22346231-22346343)
chr1 (215-328)||(41147472-41147584)
chr1 (223-328)||(42607326-42607430)
chr1 (215-327)||(27209715-27209826)
chr1 (221-320)||(11385810-11385908)
chr1 (215-328)||(49508728-49508839)
chr1 (223-331)||(6170553-6170660)
chr1 (215-327)||(43433776-43433887)
chr1 (216-328)||(49901926-49902037)
chr1 (216-324)||(50295428-50295535)
chr1 (222-328)||(47655372-47655477)
chr1 (215-328)||(11385981-11386093)
chr1 (215-328)||(29966822-29966935)
chr1 (223-328)||(33929966-33930070)
chr1 (215-331)||(2125701-2125816)
chr1 (216-328)||(24140773-24140883)
chr1 (221-328)||(4940740-4940846)
chr1 (215-321)||(32213883-32213988)
chr1 (222-326)||(40845253-40845356)
chr1 (220-328)||(52396443-52396549)
chr1 (215-328)||(7190469-7190581)
chr1 (215-324)||(28850904-28851011)
chr1 (223-327)||(26469584-26469687)
chr1 (223-331)||(28277484-28277591)
chr1 (235-331)||(50154470-50154565)
chr1 (215-331)||(44286869-44286984)
chr1 (215-307)||(45721773-45721864)
chr1 (248-331)||(47895331-47895413)
chr1 (222-324)||(4656020-4656121)
chr1 (215-301)||(5945447-5945532)
chr1 (215-313)||(14331852-14331949)
chr1 (215-313)||(16691309-16691406)
chr1 (219-313)||(17402963-17403056)
chr1 (223-331)||(31975484-31975591)
chr1 (235-313)||(48938651-48938727)
chr1 (215-265)||(8244150-8244200)
chr1 (219-313)||(43168156-43168249)
chr1 (251-324)||(30222624-30222697)
chr1 (215-313)||(44359666-44359763)
chr1 (222-324)||(40920189-40920292)
chr1 (220-325)||(41492912-41493015)
chr1 (240-313)||(41898878-41898950)
chr1 (235-303)||(8892785-8892852)
chr1 (229-303)||(27210750-27210823)
chr1 (221-255)||(30222991-30223025)
[»] chr2 (38 HSPs)
chr2 (217-328)||(6999202-6999312)
chr2 (215-327)||(765147-765258)
chr2 (222-324)||(2966544-2966645)
chr2 (219-328)||(862589-862697)
chr2 (215-328)||(39401532-39401643)
chr2 (215-331)||(16361563-16361678)
chr2 (215-328)||(17603811-17603923)
chr2 (215-328)||(33726380-33726492)
chr2 (215-328)||(39085789-39085901)
chr2 (223-328)||(41436478-41436582)
chr2 (215-327)||(27495124-27495235)
chr2 (222-331)||(17118377-17118484)
chr2 (215-328)||(1321168-1321280)
chr2 (219-328)||(35445291-35445400)
chr2 (222-331)||(9201499-9201606)
chr2 (219-324)||(17095068-17095171)
chr2 (222-331)||(33864352-33864460)
chr2 (235-327)||(44173120-44173211)
chr2 (216-320)||(44299679-44299782)
chr2 (227-337)||(13997913-13998022)
chr2 (219-324)||(17056059-17056162)
chr2 (219-324)||(17068506-17068609)
chr2 (227-331)||(464792-464896)
chr2 (219-324)||(17074489-17074592)
chr2 (254-331)||(23685688-23685764)
chr2 (282-331)||(11445382-11445431)
chr2 (224-328)||(34334167-34334270)
chr2 (222-324)||(2239586-2239687)
chr2 (223-315)||(43140328-43140419)
chr2 (267-328)||(15004927-15004987)
chr2 (240-283)||(11445313-11445356)
chr2 (222-313)||(34220650-34220740)
chr2 (222-327)||(2805382-2805488)
chr2 (215-313)||(11659277-11659374)
chr2 (215-268)||(12695233-12695286)
chr2 (219-283)||(1729528-1729592)
chr2 (236-272)||(34316342-34316378)
chr2 (236-280)||(37230267-37230311)
[»] chr7 (38 HSPs)
chr7 (215-328)||(43567503-43567615)
chr7 (215-328)||(29034687-29034799)
chr7 (215-328)||(5240329-5240441)
chr7 (215-324)||(40763253-40763361)
chr7 (222-331)||(42222218-42222326)
chr7 (215-327)||(8380442-8380553)
chr7 (222-331)||(43958087-43958195)
chr7 (216-328)||(8292745-8292856)
chr7 (219-327)||(27053494-27053601)
chr7 (223-328)||(7322958-7323062)
chr7 (219-328)||(22521586-22521694)
chr7 (223-328)||(24359713-24359817)
chr7 (216-328)||(22707049-22707159)
chr7 (216-331)||(49069552-49069666)
chr7 (215-331)||(30538477-30538589)
chr7 (217-327)||(41188785-41188894)
chr7 (216-324)||(40066915-40067021)
chr7 (224-323)||(3681699-3681797)
chr7 (219-328)||(1910244-1910351)
chr7 (215-304)||(48454819-48454907)
chr7 (233-328)||(40194826-40194920)
chr7 (215-308)||(36279139-36279231)
chr7 (222-331)||(46478560-46478667)
chr7 (215-327)||(8258640-8258746)
chr7 (219-328)||(5347973-5348078)
chr7 (236-327)||(46042749-46042838)
chr7 (228-325)||(31626051-31626147)
chr7 (238-324)||(42291284-42291371)
chr7 (256-328)||(29687476-29687547)
chr7 (222-327)||(1907593-1907697)
chr7 (251-319)||(30388693-30388760)
chr7 (235-283)||(31360309-31360357)
chr7 (255-325)||(6548533-6548602)
chr7 (298-327)||(29959068-29959097)
chr7 (239-324)||(32204186-32204270)
chr7 (238-283)||(37869384-37869429)
chr7 (235-327)||(42552489-42552579)
chr7 (235-303)||(3720131-3720198)
[»] chr3 (40 HSPs)
chr3 (220-328)||(36730155-36730262)
chr3 (216-331)||(4759848-4759962)
chr3 (219-328)||(8715503-8715610)
chr3 (219-328)||(9067390-9067497)
chr3 (215-327)||(29915572-29915683)
chr3 (215-327)||(29964725-29964836)
chr3 (222-331)||(46317483-46317591)
chr3 (215-331)||(32415566-32415681)
chr3 (216-331)||(44695669-44695783)
chr3 (216-331)||(37509108-37509222)
chr3 (227-328)||(12905292-12905391)
chr3 (215-328)||(44570383-44570495)
chr3 (215-328)||(10854859-10854975)
chr3 (237-327)||(52570783-52570872)
chr3 (223-328)||(35306332-35306436)
chr3 (219-328)||(51817313-51817421)
chr3 (215-328)||(8847449-8847561)
chr3 (223-328)||(12051038-12051142)
chr3 (215-324)||(25102319-25102426)
chr3 (215-283)||(1803932-1804000)
chr3 (215-327)||(45899540-45899652)
chr3 (243-331)||(20227405-20227492)
chr3 (219-320)||(18788-18888)
chr3 (267-328)||(31647304-31647364)
chr3 (238-326)||(34060786-34060873)
chr3 (215-255)||(41346346-41346386)
chr3 (215-271)||(48136720-48136776)
chr3 (252-326)||(41345977-41346050)
chr3 (233-321)||(11675320-11675405)
chr3 (20-83)||(2022788-2022851)
chr3 (229-300)||(39436493-39436563)
chr3 (17-83)||(3156968-3157034)
chr3 (236-320)||(18946-19029)
chr3 (17-69)||(3167250-3167302)
chr3 (234-310)||(49976157-49976232)
chr3 (245-324)||(11316970-11317048)
chr3 (216-313)||(12060057-12060153)
chr3 (205-270)||(44019107-44019172)
chr3 (216-313)||(48313836-48313932)
chr3 (239-323)||(21324521-21324603)
[»] chr8 (33 HSPs)
chr8 (215-328)||(19389307-19389419)
chr8 (216-328)||(21016234-21016345)
chr8 (222-328)||(25249345-25249450)
chr8 (227-327)||(18068963-18069062)
chr8 (219-327)||(45338005-45338112)
chr8 (217-331)||(6939155-6939268)
chr8 (222-324)||(8018765-8018866)
chr8 (221-328)||(4989936-4990039)
chr8 (224-328)||(21016063-21016166)
chr8 (228-328)||(26195383-26195482)
chr8 (223-319)||(26672799-26672894)
chr8 (223-324)||(10694811-10694911)
chr8 (219-328)||(3174456-3174568)
chr8 (223-328)||(34713924-34714030)
chr8 (228-328)||(14855394-14855493)
chr8 (223-327)||(37433267-37433369)
chr8 (221-308)||(5129459-5129545)
chr8 (219-283)||(7532829-7532893)
chr8 (235-310)||(31596438-31596512)
chr8 (229-315)||(26892799-26892884)
chr8 (221-283)||(44874369-44874431)
chr8 (215-296)||(35930168-35930248)
chr8 (236-324)||(6433548-6433635)
chr8 (267-331)||(33741523-33741586)
chr8 (222-310)||(25636694-25636780)
chr8 (239-313)||(25690855-25690929)
chr8 (220-313)||(11332796-11332888)
chr8 (216-272)||(19976488-19976545)
chr8 (235-313)||(34421335-34421412)
chr8 (282-327)||(30351592-30351637)
chr8 (229-277)||(6841707-6841755)
chr8 (243-327)||(39972177-39972260)
chr8 (291-319)||(41689098-41689126)
[»] chr6 (21 HSPs)
chr6 (216-328)||(6866915-6867026)
chr6 (216-328)||(12191493-12191604)
chr6 (215-317)||(10855443-10855544)
chr6 (215-328)||(5578274-5578386)
chr6 (238-328)||(7875201-7875290)
chr6 (215-305)||(29692338-29692427)
chr6 (215-331)||(8324101-8324216)
chr6 (215-328)||(26572079-26572186)
chr6 (220-328)||(16437592-16437691)
chr6 (216-331)||(7274212-7274326)
chr6 (219-325)||(28014638-28014743)
chr6 (238-328)||(7880447-7880536)
chr6 (284-328)||(32786069-32786113)
chr6 (235-313)||(27127524-27127601)
chr6 (234-327)||(12175561-12175652)
chr6 (215-283)||(32786260-32786327)
chr6 (216-327)||(31220325-31220435)
chr6 (237-277)||(12769254-12769294)
chr6 (235-310)||(20775010-20775084)
chr6 (223-304)||(22414598-22414676)
chr6 (236-304)||(12402842-12402909)
[»] scaffold0062 (3 HSPs)
scaffold0062 (219-328)||(16773-16880)
scaffold0062 (219-328)||(26941-27048)
scaffold0062 (219-328)||(37107-37214)
[»] scaffold0002 (1 HSPs)
scaffold0002 (248-328)||(392162-392241)
[»] scaffold0809 (2 HSPs)
scaffold0809 (216-283)||(4268-4335)
scaffold0809 (282-328)||(4709-4755)
[»] scaffold0144 (1 HSPs)
scaffold0144 (235-301)||(39614-39679)
[»] scaffold0050 (2 HSPs)
scaffold0050 (222-270)||(37393-37441)
scaffold0050 (267-323)||(37428-37483)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 1760136 - 1759786
Alignment:
Q  15 cctgtgaagtagcaaattttctcttgcaaaataaacatgaaaaagaccttgaatccaaatttttctctttgttcttgttctaattttcatctttcccttc 114  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1760136 cctgtgaagtagtaaattttctcttgcaaaataaacatgaaaaagaccttgaatccaaatttttctctttgttcttgttctaattttcatctttctcttc 1760037  T
Q  115 tttgttgttatttggaaaa-------atgaaccaactttcttactctcttcctcttccgctctctgttgcttctgttttcttctttatatttaacaaaag 207  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1760036 tttgttgttatttggaaaaccagatgatgaaccaactttcttactctcttcctcttccgctctctgttgcttttgttttcttctttatatttaacaaaag 1759937  T
Q  208 gtgaatgcttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgtt 307  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||||    
T  1759936 gagaatgcttggggcattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaa-tttaactttttaaaagtcaaaatgtt 1759838  T
Q  308 gttgaaaccaatgcaaacatgttagcaagacccttaacaaaatagtgtgact 359  Q
    ||| |||||||||||||  |||||||||||| ||||||||||||||||||||    
T  1759837 gttaaaaccaatgcaaatgtgttagcaagacacttaacaaaatagtgtgact 1759786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 437 - 611
Target Start/End: Complemental strand, 1759708 - 1759534
Alignment:
Q  437 caattgtgtgttttaaaattcaacttatattatcggttggtgtaatnnnnnnngaagtttgaagtatgggattaagtctgaaaatgaccctgcagtccta 536  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||||    
T  1759708 caattgtgtgttttaaaatttaacttatattatcagttggtgtaataaaaaaagaagtttgaagtatgggcttaagtctgaaaatgaccctgcagtccta 1759609  T
Q  537 gaagggctcttattaaagatgaaaattttggtcattctgcaatgctagataatcagagaagaattatagaaatat 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1759608 gaagggctcttattaaagatgaaaattttggtcattctgcaatgctagataatcagagaagaattatagaaatat 1759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 35653252 - 35653364
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||| ||| |||||||||||||||||    
T  35653252 cttggtgcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttgaaaatcaaaatgttgttgaaa 35653350  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  35653351 ccaatgcaaacatg 35653364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 226 - 331
Target Start/End: Original strand, 43414072 - 43414176
Alignment:
Q  226 ggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaac 325  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||    
T  43414072 ggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgatcaa-tttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaac 43414170  T
Q  326 atgtta 331  Q
    ||||||    
T  43414171 atgtta 43414176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 25017288 - 25017400
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||| | |||||||    
T  25017288 cttgaggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaa-tttaactttttaaaagtcaaaatatcgttgaaa 25017386  T
Q  315 ccaatgcaaacatg 328  Q
    ||||| ||||||||    
T  25017387 ccaatacaaacatg 25017400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 5151596 - 5151489
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  5151596 ggcatttgataaggggataaaaatagaaatataacattggaaaatgatgaaaaatgataaa-tttaactttttaaaagtcaaaatgttgttgaaactaat 5151498  T
Q  320 gcaaacatg 328  Q
    |||||||||    
T  5151497 gcaaacatg 5151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 16315535 - 16315639
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||   || |||||||| |||||||||||||||||||||||    
T  16315535 gggcatcggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa---taactttttaatagtcaaaatgttgttgaaaccaa 16315631  T
Q  319 tgcaaaca 326  Q
    ||||||||    
T  16315632 tgcaaaca 16315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 39568015 - 39567903
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||||||||| |||||||||||||| |||| |||||||||| ||||||  |||||||||    
T  39568015 cttggggcattggataatgggataaaaatataaatatagcattggaaaatgatgaaaaatgataaa-tttaactttttaaaaatcaaaacattgttgaaa 39567917  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  39567916 ccaatgcaaacatg 39567903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 331
Target Start/End: Original strand, 4421965 - 4422076
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||| || ||||||||||||||||  |||    
T  4421965 gggcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttacaaatcaaaatgttgttgaagtcaa 4422063  T
Q  319 tgcaaacatgtta 331  Q
    |||||||||||||    
T  4422064 tgcaaacatgtta 4422076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 8410253 - 8410142
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||| ||| |||||||||||||||||| |||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||||||||| || ||||    
T  8410253 ttggggtattagataaggggataaaaataaaaatatagtattagaaaatggtaaaaaatgataaa-tttaactttttaaaagtcaaaatgttattaaaac 8410155  T
Q  316 caatgcaaacatg 328  Q
    |||| ||||||||    
T  8410154 caatacaaacatg 8410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 12068178 - 12068283
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |||| |||||| |    
T  12068178 cattggatgaggatataaaaatagaaatatagtattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttattgacaccaatac 12068276  T
Q  322 aaacatg 328  Q
    |||||||    
T  12068277 aaacatg 12068283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 34546882 - 34546782
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||||||| || ||||||||||| |||||||||||||||| ||||||    
T  34546882 attggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaat-tttttaaaagttaaaatgttgttgaaactaatgca 34546784  T
Q  323 aa 324  Q
    ||    
T  34546783 aa 34546782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 27823365 - 27823279
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| | |||||||||    
T  27823365 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaa-tttaactttttaaaaattaaaatgttg 27823279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 3639079 - 3639182
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||| |||||||||||||||||||||||||  |||||||||||||||| | |||||||||| || |||||||||||| |||| ||||||||||||||||    
T  3639079 cattgaataaggggataaaaatagaaatataacattggaaaatggtgaagagtgataaatttaat-tttttaaaagtc-aaatattgttgaaaccaatgc 3639176  T
Q  322 aaacat 327  Q
    ||||||    
T  3639177 aaacat 3639182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 28143120 - 28143232
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| ||||| |||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| |||| |||||||||| |||||||||||||||||    
T  28143120 cttgggacattgaataaggagataaaaatagaaatataacattgggaaatggtgaaaaataataaa-tttaactttttaaaaatcaaaatgttgttgaaa 28143218  T
Q  315 ccaatgcaaacatg 328  Q
    | ||| ||||||||    
T  28143219 ctaatacaaacatg 28143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 35945358 - 35945250
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||| |||||||||||| |||||||||||||||||  |||||||||| ||||||| ||||||| |||| ||||||||| || |||||||||||||||    
T  35945358 cttggggtattggataagggaataaaaatagaaatataacattggaaaatagtgaaaagtgataaa-tttaactttttaaatgttaaaatgttgttgaaa 35945260  T
Q  315 ccaatgcaaa 324  Q
    | ||||||||    
T  35945259 ctaatgcaaa 35945250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 1479133 - 1479236
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| |||||  |||||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  1479133 cttgaggcattgaataaggggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaa-tttaactttttaaaagtcaaaatgttattgaaa 1479231  T
Q  315 ccaat 319  Q
    |||||    
T  1479232 ccaat 1479236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 13951258 - 13951345
Alignment:
Q  240 aaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||||||||||| |||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| ||||    
T  13951258 aaatagaaatatagcattgaaaaatggtgaaaagtgataaattt-atttttttaaaagtcaaaatgttgttgaaaccaatgcaagcatg 13951345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 338761 - 338873
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||| |||||| | |||| ||||||| |||| |||||||||| ||||||| |||||||||    
T  338761 cttggggcattggataaagggataaaaataaaaatatgatattgaaaaatgataaaaagtgataaa-tttaactttttaaaaatcaaaatattgttgaaa 338859  T
Q  315 ccaatgcaaacatg 328  Q
    | ||||||||||||    
T  338860 caaatgcaaacatg 338873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 4962514 - 4962625
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| ||||||||||||  |||||||||||||||||  ||||||||||| |||||| ||||||| |||| |||||| |||||||||||||||||||||    
T  4962514 cttgggacattggataagga-ataaaaatagaaatataacattggaaaatgatgaaaagtgataaa-tttaacttttttaaagtcaaaatgttgttgaaa 4962611  T
Q  315 ccaatgcaaacatg 328  Q
    | ||| ||||||||    
T  4962612 ctaatacaaacatg 4962625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 331
Target Start/End: Original strand, 25568304 - 25568404
Alignment:
Q  230 aaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgt 329  Q
    ||||||||||||||| |||||||| |||| |||||| |||||| ||||| |||| | |||||||||| |||||||||| |||||||||||||||||||||    
T  25568304 aaggggataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaa-ctttttaaaaatcaaaatgttattgaaaccaatgcaaacatgt 25568402  T
Q  330 ta 331  Q
    ||    
T  25568403 ta 25568404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 15915944 - 15915876
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  15915944 cttggggcattggataagggaataaaaatagaaatatagcattggaaaatggtgaaaagtgataaattt 15915876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 37243958 - 37243852
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| |||||||||||| || ||||||||| ||||||| ||||||||||||||||||| ||||||| |||| |||||||||| | |||||||||||||||    
T  37243958 cttgaggcattggataaagg-ataaaaataaaaatataatattggaaaatggtgaaaagtgataaa-tttaactttttaaaaattaaaatgttgttgaaa 37243861  T
Q  315 ccaatgcaa 323  Q
     ||||||||    
T  37243860 tcaatgcaa 37243852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 10017626 - 10017727
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||| |||||| |||||||||||||||||||||| |||||| ||||||||| ||||||||   | |||||||||||| ||||||||||| ||||||||||    
T  10017626 catttgataagaggataaaaatagaaatatagtactggaaa-tggtgaaaattgataaat---aactttttaaaagttaaaatgttgttaaaaccaatgc 10017721  T
Q  322 aaacat 327  Q
    ||||||    
T  10017722 aaacat 10017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 12914261 - 12914176
Alignment:
Q  241 aatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||||||||| |||| ||||||||||||| |||||||||| || ||||||||| ||||||| ||||||||||||||||||||||    
T  12914261 aatagaaatatagcattgaaaaatggtgaaaagtgataaatttaat-tttttaaaaatcaaaatattgttgaaaccaatgcaaacat 12914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 1739080 - 1738973
Alignment:
Q  20 gaagtagcaaattttctcttgcaaaataaacatgaaaaagaccttgaatccaaatttttctctttgttcttgttctaattttcatctttcccttctttgt 119  Q
    ||||||| |||||||| |||||||||||| |||||||||| |||||||||||  |||||||| |  |||||||||      |||||||||||||  ||||    
T  1739080 gaagtagaaaattttcccttgcaaaataagcatgaaaaagtccttgaatccatttttttctcctcattcttgttc------tcatctttccctttattgt 1738987  T
Q  120 tgttatttggaaaa 133  Q
    ||||||||||||||    
T  1738986 tgttatttggaaaa 1738973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 1744426 - 1744360
Alignment:
Q  17 tgtgaagtagcaaattttctcttgcaaaataaacatgaaaaagaccttgaatccaaatttttctctt 83  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  1744426 tgtgaagtagaaaattttcccttgcaaaataagcatgaaaaagaccttgaatccatttttttctctt 1744360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 6823773 - 6823858
Alignment:
Q  239 aaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    ||||||||||||| |||| |||||| |||| ||| | |||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  6823773 aaaatagaaatattgtatcggaaaacggtggaaagtaataaattttaactttttaaaagttaaaatattgttgaatccaatgcaaa 6823858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 27535202 - 27535098
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    ||||||| ||||  ||||||||||| |||||| |||||| ||||||||||||| |||| |||||||  ||||||||||| ||||   ||||||| |||||    
T  27535202 ggcattgaataaaaggataaaaatataaatattgtattgaaaaatggtgaaaagtgatgaattttaagtttttaaaagttaaaa---tgttgaatccaat 27535106  T
Q  320 gcaaacat 327  Q
    ||||||||    
T  27535105 gcaaacat 27535098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 39693090 - 39693007
Alignment:
Q  247 aatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    ||||||| |||| ||| |||| ||||||||||||||| |||||||||||||| ||||| ||||||||| |||| |||||||||||    
T  39693090 aatatagcattgaaaagtggtaaaaaatgataaattt-atctttttaaaagttaaaatattgttgaaatcaatacaaacatgtta 39693007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 1724496 - 1724448
Alignment:
Q  15 cctgtgaagtagcaaattttctcttgcaaaataaacatgaaaaagacct 63  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1724496 cctgtgaagtagaaaattttctcttgcaaaataagcatgaaaaagacct 1724448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 10406873 - 10406785
Alignment:
Q  241 aatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    ||||||||||| |||||| ||||||| ||||| |||||||||| |  ||||| ||| ||||||| |||||||| |||||||||| ||||||    
T  10406873 aatagaaatattgtattgaaaaatggagaaaagtgataaatttaa--ttttttaaattcaaaatattgttgaatccaatgcaaaaatgtta 10406785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 4838324 - 4838278
Alignment:
Q  285 atctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  4838324 atctttttaaaagtcaaaatattgttgaaactaatgcaaacatgtta 4838278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 16899599 - 16899680
Alignment:
Q  246 aaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||| || |||| ||| | |||||| | || ||||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  16899599 aaatattgtgttgggaaaggatgaaaagtaatgaattttaactttttaaaagtcaaaatgttgttgaatccaatacaaacat 16899680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 3015067 - 3015144
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||||||||||| || || |||||| ||| |||||||| || |||| |||||||||||| ||||| ||||||||    
T  3015067 gataaaaatagaaatattgtgttagaaaatagtgtaaaatgattaa-tttaactttttaaaagttaaaatattgttgaa 3015144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 39335519 - 39335474
Alignment:
Q  282 tttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||    
T  39335519 tttaactttttaaaagtcaaaatgttgttgaatccaatacaaacat 39335474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 28599677 - 28599759
Alignment:
Q  241 aatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    |||| ||||||  ||||||||||| |||||||||||||||||| | |||||||||||| ||||  || |||||  |||||||||    
T  28599677 aataaaaatattatattggaaaatagtgaaaaatgataaatttga-ctttttaaaagttaaaaatttattgaattcaatgcaaa 28599759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 39042050 - 39042128
Alignment:
Q  233 gggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttga 312  Q
    |||||||||||| |||||||  |||| |||||  ||||||||| | ||||| || ||||||||||| |||||||||||||    
T  39042050 gggataaaaataaaaatataacattgtaaaataatgaaaaatggttaatttaat-tttttaaaagttaaaatgttgttga 39042128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 40099443 - 40099363
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaa-tggtgaaaaatgataaattttatctttttaaaa 296  Q
    |||| |||||||||||||||||  |||||| |||||||| |||| |||| ||||||||| |||||||||| | ||||| ||||    
T  40099443 cttgtggcattggataagggga--aaaataaaaatatagcattgaaaaaatggtgaaaagtgataaatttaaccttttaaaaa 40099363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 104926 - 104976
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatg 265  Q
    ||||||| ||||||||||||  |||||||||||||||| |||| |||||||    
T  104926 cttggggtattggataagggagtaaaaatagaaatataatattagaaaatg 104976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 17168783 - 17168691
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||| ||||  |||| |||||||||||| | |||| |||| ||||||||||||| ||||| | |||||||||| | ||||| ||| ||||    
T  17168783 ggcattggttaagaagatacaaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttga-ctttttaaaatttaaaatattgctgaa 17168691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 39069298 - 39069370
Alignment:
Q  240 aaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||| || || |||||||||||| ||||||| |||| ||||| | | |||||||||||||||| ||||||||    
T  39069298 aaataggaacattgtattggaaaattgtgaaaagtgatgaatttaa-cattttaaaagtcaaaatattgttgaa 39069370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 39167687 - 39167650
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaa 272  Q
    |||||||||||||| || ||||||||||||||||||||    
T  39167687 gataaaaatagaaacattgtattggaaaatggtgaaaa 39167650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 678556 - 678465
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||| |||| ||| |||||||||| | | |||||||||||||||||||| | || || |||| | |||||||||| ||||  ||||||||    
T  678556 gcattggttaagaggacaaaaatagaattgttgtattggaaaatggtgaaaagtaatgaa-tttaaccttttaaaagttaaaaaattgttgaa 678465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 35808393 - 35808505
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  35808393 cttggggcattggataaggggataaaaatagaaatatagcattggaaaattgtgaaaaatgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 35808491  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  35808492 ccaatgcaaacatg 35808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 55669851 - 55669739
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  55669851 cttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgataaa-tttaactttttaaaagtcaaaatgttgttaaaa 55669753  T
Q  315 ccaatgcaaacatg 328  Q
     |||||||||||||    
T  55669752 acaatgcaaacatg 55669739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 2362743 - 2362630
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttta-tctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | | ||||||||||||||||||||||| ||    
T  2362743 cttggggcatcggataaggggataaaaataaaaatatagtattggaaaatggtgaaaagtgataaatttaattttttttaaaagtcaaaatgttgttaaa 2362644  T
Q  314 accaatgcaaacat 327  Q
    ||||||||||||||    
T  2362643 accaatgcaaacat 2362630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 26040357 - 26040465
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||| ||||||||     
T  26040357 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgat-aagtttaactttttaaaagtcaaaatattgttgaag 26040455  T
Q  315 ccaatgcaaa 324  Q
    ||||||||||    
T  26040456 ccaatgcaaa 26040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 32131247 - 32131139
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  32131247 cattggataaagagataaaaatagaaatatagtattggaaaatggtgataagtgataaa-tttaactttttaaaagtcaagatgttgttgaaaccaatgc 32131149  T
Q  322 aaacatgtta 331  Q
    ||||||||||    
T  32131148 aaacatgtta 32131139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 34016730 - 34016626
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||| ||||||    
T  34016730 cattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgatgaa-tttaactttttaaaagtcaaaatgttgttgaaatcaatgc 34016632  T
Q  322 aaacat 327  Q
    ||||||    
T  34016631 aaacat 34016626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 41956210 - 41956322
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||     
T  41956210 cttggggcatcggataagaggataaaaatagaaatataacattggaaaatgatgaaaaatgataaa-tttaactttttaaaagtcaaaatgttgttgaag 41956308  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  41956309 ccaatgcaaacatg 41956322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 10100110 - 10100225
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| ||| ||||||||||||||||||| ||||||| |||| |||||||||||||| | |||||||| | ||||||||||||||||||||||||||||    
T  10100110 cttgggacatcggataaggggataaaaatataaatataatattagaaaatggtgaaaagttataaatttaa-ctttttaaaagtcaaaatgttgttgaaa 10100208  T
Q  315 ccaatgcaaacatgtta 331  Q
    |||||||||||||||||    
T  10100209 ccaatgcaaacatgtta 10100225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 23765689 - 23765578
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||| ||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||    
T  23765689 ttggtgcattagataaggggataaaaattgaaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttaaaaatcaaaatgttgttgaaac 23765591  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  23765590 caatgcaaacatg 23765578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 51267029 - 51266924
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||| |    
T  51267029 cattggataaggagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaatcaatac 51266931  T
Q  322 aaacatg 328  Q
    |||||||    
T  51266930 aaacatg 51266924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 27839303 - 27839415
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||||| ||||  |||||||||||||||||||| || |||    
T  27839303 cttggggcattggataagggaataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaa-tttaagtttttaaaagtcaaaatgttattaaaa 27839401  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  27839402 ccaatgcaaacatg 27839415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 34316719 - 34316832
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||| |||||||||| |||||||  |||| ||||| ||||||| ||||||| |||| |||||||||||||||||| |||||||||    
T  34316719 cttggggcattggataaggagataaaaatataaatataacattgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatattgttgaaa 34316818  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  34316819 ccaatgcaaacatg 34316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 45688855 - 45688743
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||| |||||||||||||||||||||||||| |||| |||| |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  45688855 cttggggtattggataaggggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 45688757  T
Q  315 ccaatgcaaacatg 328  Q
    | ||||||||||||    
T  45688756 ctaatgcaaacatg 45688743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 31755049 - 31754938
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||| |||||||||||||||||||||| |||||||| |||| |||||| |||||| ||||||| |||| |||||||||||||||||| ||||||||||    
T  31755049 ttggggtattggataaggggataaaaatataaatatagaattgaaaaatgatgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaac 31754951  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  31754950 caatgcaaacatg 31754938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 33951804 - 33951697
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||| | |||||||||||||||||||| ||    
T  33951804 attgaataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaa-tttaactttttaaaaattaaaatgttgttgaaaccaataca 33951706  T
Q  323 aacatgtta 331  Q
    |||||||||    
T  33951705 aacatgtta 33951697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 30475529 - 30475426
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  30475529 attggataaggagataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaa-tttaactttttaaatgtcaaaatattgttgaaaccaatgca 30475431  T
Q  323 aacat 327  Q
    |||||    
T  30475430 aacat 30475426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 26831783 - 26831894
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| |||||||| |||| ||||||| ||||||||||||||| | |||||||||||||||    
T  26831783 cttggggcattgaataagaggataaaaatagaaatataatattgtaaaatggtaaaaagtgataaa-tttatctttttaaaaattaaaatgttgttgaaa 26831881  T
Q  315 ccaatgcaaacatg 328  Q
     |||||||||||||    
T  26831882 -caatgcaaacatg 26831894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 20811362 - 20811263
Alignment:
Q  228 ataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||||||||||||||||||||||  |||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||    
T  20811362 ataaggggataaaaatagaaatataacattggaaattggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttaaaatcaatgcaaacat 20811264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 31168246 - 31168135
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||| ||||| || |||||||||||||||||| | ||| |||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||    
T  31168246 cttggagcattagacaaggggataaaaatagaattttagcattggaaaatggtgaaaagtgataaatttaat-ttttttaaagtcaaaatgttgttgaaa 31168148  T
Q  315 ccaatgcaaacat 327  Q
    |||||| ||||||    
T  31168147 ccaatgtaaacat 31168135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 19328950 - 19329037
Alignment:
Q  240 aaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||||||||||| |||||||||||||||||  |||||||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  19328950 aaatagaaatatagcattggaaaatggtgaaatgtgataaatttaa-ctttttaaaagtcaaaatattgttgaaaccaatgcaaacatg 19329037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 50514618 - 50514722
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||||||||| |||||||| ||||||||||  |||| |||||||| |||| |||||||||| | |||||||||||| ||||||||||||||||||||||    
T  50514618 cattggataagaggataaaa-tagaaatataacattgaaaaatggtaaaaagtgataaatttaa-ctttttaaaagttaaaatgttgttgaaaccaatgc 50514715  T
Q  322 aaacatg 328  Q
    |||||||    
T  50514716 aaacatg 50514722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 47188695 - 47188774
Alignment:
Q  248 atatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    ||||||||||||||||||||||||| |||||||||| | ||| | ||||||||||||||||||||||||||||||||||||    
T  47188695 atatagtattggaaaatggtgaaaagtgataaatttaa-cttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatg 47188774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 54339223 - 54339121
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||||||||||||| |||||||||||| |||||||  |||| ||||||||| |||||||||||||| || ||||||||||||||||| || |||||||    
T  54339223 ttggggcattggataaagggataaaaatataaatataacattgaaaaatggtg-aaaatgataaatttaat-tttttaaaagtcaaaatatttttgaaac 54339126  T
Q  316 caatg 320  Q
    |||||    
T  54339125 caatg 54339121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 19876186 - 19876248
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  19876186 gcattggataaggggataaaaatagaaatatagtattggaaaatagtgaaaagtgataaattt 19876248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 52341694 - 52341602
Alignment:
Q  234 ggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||| ||||||||||||  | |||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  52341694 ggatacaaatagaaatattatgttggaaaatgatgaaaaatgatgaatttaa-ctttttaaaagtcaaaatgttgttgaatccaatgcaaacat 52341602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 35675187 - 35675298
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||| ||||  ||||||||||||||||| ||||||| |||| ||||||| |||| || |||| |||||||||||| ||||| ||||||||     
T  35675187 cttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaa-tttaactttttaaaagttaaaatattgttgaat 35675285  T
Q  315 ccaatgcaaacat 327  Q
     ||||||||||||    
T  35675286 tcaatgcaaacat 35675298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 29462909 - 29462802
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||  |||| ||||||||||| ||||||  ||||| |||||| ||||||||||  |||||||| ||||| |||||||||||||||||||| ||||    
T  29462909 gggcattgtttaagaggataaaaataaaaatattatattgaaaaatgatgaaaaatgaggaattttat-tttttcaaagtcaaaatgttgttgaatccaa 29462811  T
Q  319 tgcaaacat 327  Q
    || ||||||    
T  29462810 tgtaaacat 29462802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 40436192 - 40436081
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||| ||||||||||||||||||||||  ||| |||| |||  |||||| |||||||| ||||| |||| |||||||||  ||||||| ||||||||||    
T  40436192 ttgggacattggataaggggataaaaatgaaaaaatagcattaaaaaatgatgaaaaataataaa-tttaactttttaaatatcaaaatattgttgaaac 40436094  T
Q  316 caatgcaaacatg 328  Q
    ||| |||||||||    
T  40436093 caaagcaaacatg 40436081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 51290542 - 51290474
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||    
T  51290542 cttgggacattggataaggggataaaattagaaatatagcattggaaaatgatgaaaagtgataaattt 51290474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 216 - 328
Target Start/End: Original strand, 53566948 - 53567062
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataa--attttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||||| ||| | ||||||||||||||||||| |||| ||||| || |||| |  |||  | |||| |||||||||||| ||||||||||||||    
T  53566948 ttggggcattggttaaagagataaaaatagaaatatagcattgaaaaatagtaaaaagtactaataaatttaactttttaaaagttaaaatgttgttgaa 53567047  T
Q  314 accaatgcaaacatg 328  Q
    ||  |||||||||||    
T  53567048 actcatgcaaacatg 53567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 46695960 - 46696026
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatt 282  Q
    |||||| |||||||||| ||||||||||| |||||||| |||| ||||||||||||| |||||||||    
T  46695960 ttggggtattggataagtggataaaaataaaaatataggattgaaaaatggtgaaaagtgataaatt 46696026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 13498120 - 13498224
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    ||||||| ||||  ||||||||||||||||| |||||||||||| || || || ||| || |||| |||||||||||||||||  |||||||| ||||||    
T  13498120 gcattggttaagatgataaaaatagaaatattgtattggaaaatagtaaagaacgatgaa-tttaactttttaaaagtcaaaactttgttgaatccaatg 13498218  T
Q  321 caaaca 326  Q
     |||||    
T  13498219 taaaca 13498224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 9693380 - 9693446
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||| |||||||||||||||||||||||| | ||||| |||| ||||| |||||||||||||||||||    
T  9693380 ttggcgcattggataaggggataaaaataaagatataatatt-gaaaaaggtgaaaaatgataaattt 9693446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 31487833 - 31487743
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgt 306  Q
    ||||| |||||| ||||||||||||||||| |||||||| |||| ||||| || |||| |||||||||| | |||||||||  |||||||||    
T  31487833 cttggagcattgaataaggggataaaaataaaaatatagcattgaaaaatagttaaaagtgataaatttga-ctttttaaagatcaaaatgt 31487743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 35511184 - 35511264
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaa 303  Q
    |||||| ||||  ||| ||||||||||||| |||||||||||||||||||| |||| ||||| | |||||||||||| ||||    
T  35511184 cattggttaagtagatgaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttga-ctttttaaaagttaaaa 35511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 3769906 - 3769816
Alignment:
Q  234 ggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaac 325  Q
    |||||||  ||||||||| | |||| ||||||||||||| |||||||||| | |||||||||||| ||||| ||||| ||  ||||||||||    
T  3769906 ggataaatttagaaatattgcattgaaaaatggtgaaaagtgataaatttga-ctttttaaaagttaaaatattgttaaattcaatgcaaac 3769816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 45088148 - 45088071
Alignment:
Q  246 aaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||||| ||||||||||| |||||| |||||||||| || ||||| ||||||||||   |||||||| ||||||||||||    
T  45088148 aaatatagcattggaaaatgatgaaaagtgataaatttaat-tttttgaaagtcaaaa---tgttgaaatcaatgcaaacat 45088071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 9693534 - 9693580
Alignment:
Q  282 tttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||| ||||||||||||| |||| |||||||||||||||||||||||    
T  9693534 tttaactttttaaaagtcgaaatattgttgaaaccaatgcaaacatg 9693580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 323
Target Start/End: Complemental strand, 30618057 - 30617954
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||| |||| ||||||| |||||||||| | ||||| ||||| ||||||   || ||||| | ||||||||||||  |||| |||||||| ||||    
T  30618057 gggcattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaa-ctttttaaaagttcaaatattgttgaatccaa 30617959  T
Q  319 tgcaa 323  Q
    |||||    
T  30617958 tgcaa 30617954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 52895816 - 52895749
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaa 303  Q
    |||||||||||||| || ||||||  |||| ||||||| ||| |||||||| |||||||||||||||||    
T  52895816 gataaaaatagaaacattgtattgagaaattgtgaaaagtga-aaattttaactttttaaaagtcaaaa 52895749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 15986349 - 15986267
Alignment:
Q  244 agaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||||| |||||| ||||||||||||| || | ||||| |  ||||||||||||| ||| ||||||||  ||||||||||||    
T  15986349 agaaatattgtattgaaaaatggtgaaaagtggtgaatttaaa-tttttaaaagtcagaatattgttgaattcaatgcaaacat 15986267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 16559991 - 16560041
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatg 265  Q
    ||||||||||||||||| || |||||||||||||| | || ||||||||||    
T  16559991 cttggggcattggataaaggaataaaaatagaaattttgtgttggaaaatg 16560041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 20456670 - 20456569
Alignment:
Q  226 ggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaac 325  Q
    ||||||| |||||||||||||||| |  ||||| |||||| |||||| | || || ||||  |||||||| || ||||| ||||||||  ||||||||||    
T  20456670 ggataagaggataaaaatagaaatgttttattgaaaaatgatgaaaagttatgaa-tttaaatttttaaatgttaaaatattgttgaattcaatgcaaac 20456572  T
Q  326 atg 328  Q
    |||    
T  20456571 atg 20456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 35927294 - 35927379
Alignment:
Q  238 aaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    |||||||| ||| | | ||| ||||||||||||||| ||| ||||| | |||||||||||| ||||| |||||||| | ||||||||    
T  35927294 aaaaatagcaattttgcattagaaaatggtgaaaaacgatgaatttaa-ctttttaaaagttaaaatattgttgaatctaatgcaaa 35927379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 36486703 - 36486780
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||| ||| ||  ||||||||||||||||||| |||  ||||| || ||||||||||||||||| || |||||    
T  36486703 gataaaaatataaacattatattggaaaatggtgaaaagtgaagaatttaat-tttttaaaagtcaaaatattattgaa 36486780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 55120183 - 55120106
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||  |||||| |||||| ||||| |||||||||||  ||||| | |||||||||||||||||  ||||||||    
T  55120183 gataaaaattaaaatattgtattgaaaaatagtgaaaaatgaagaatttga-ctttttaaaagtcaaaacattgttgaa 55120106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 19328748 - 19328777
Alignment:
Q  219 gggcattggataaggggataaaaatagaaa 248  Q
    ||||||||||||||||||||||||||||||    
T  19328748 gggcattggataaggggataaaaatagaaa 19328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 48513724 - 48513624
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||| ||||  |||||||||| ||| || |||||| |||||| |||||| ||| | |||| | |||||||||||||||||  ||||||||  ||||||    
T  48513724 cattggttaagacgataaaaataaaaacattgtattgaaaaatgatgaaaagtgaaagatttaa-ctttttaaaagtcaaaacattgttgaattcaatgc 48513626  T
Q  322 aa 323  Q
    ||    
T  48513625 aa 48513624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 34874679 - 34874567
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  34874679 cttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaat-tttttaaaagtcaaaatgttgttgaaa 34874581  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  34874580 ccaatgcaaacatg 34874567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 932151 - 932263
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||    
T  932151 cttggggcattggataaggggataaaaatagaaatatagcattggaaaatgatgaaaaattataaatttaat-tttttaaaagtcaaaatgttgttgaaa 932249  T
Q  315 ccaatgcaaacatg 328  Q
    | ||||||||||||    
T  932250 ctaatgcaaacatg 932263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 22346231 - 22346343
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| || ||||||||||||||||| |||||||||    
T  22346231 cttggggctttggataagggaataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaat-tttttaaaagtcaaaatattgttgaaa 22346329  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  22346330 ccaatgcaaacatg 22346343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 41147472 - 41147584
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| || |||| |||||||||||||||||| |||||||||    
T  41147472 cttggggcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaa-tttaactttttaaaagtcaaaatattgttgaaa 41147570  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  41147571 ccaatgcaaacatg 41147584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 42607326 - 42607430
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  42607326 attggataaggggataaaaataaaaatatagcattgaaaaatggtgaaaaatgataaa-tttaactttttaaaagtcaaaatgttgttgaaaccaatgca 42607424  T
Q  323 aacatg 328  Q
    ||||||    
T  42607425 aacatg 42607430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 27209715 - 27209826
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  27209715 cttggggcattggataaagggataaaaatagaaatataacattggaaaatggtgaaaattgataaa-tttaactttttaaaagttaaaatgttgttgaaa 27209813  T
Q  315 ccaatgcaaacat 327  Q
    |||||||||||||    
T  27209814 ccaatgcaaacat 27209826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 221 - 320
Target Start/End: Original strand, 11385810 - 11385908
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||    
T  11385810 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagttataaa-tttaactttttaaaagtcaaaatgttgttgaaaccaatg 11385908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 49508728 - 49508839
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||| |||||||||||||||||| |||| ||||    
T  49508728 cttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtg-aaagtgataaa-tttaactttttaaaagtcaaaatattgtcgaaa 49508825  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  49508826 ccaatgcaaacatg 49508839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 6170553 - 6170660
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||| | ||||||||||||||||||| |||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  6170553 attggataaagagataaaaatagaaatatagcattggaaaatagagaaaaatgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaatgca 6170651  T
Q  323 aacatgtta 331  Q
    |||||||||    
T  6170652 aacatgtta 6170660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 43433887 - 43433776
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| |||| |||||||||| | |||||||||||||||    
T  43433887 cttggggcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaa-tttaactttttaaaaattaaaatgttgttgaaa 43433789  T
Q  315 ccaatgcaaacat 327  Q
    ||||| |||||||    
T  43433788 ccaatacaaacat 43433776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 49902037 - 49901926
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| || |||| |||||||||||    
T  49902037 ttggggtattggataagaggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaa-tttaactttttaaacgttaaaacgttgttgaaac 49901939  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  49901938 caatgcaaacatg 49901926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 50295428 - 50295535
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||| |||||||||     
T  50295428 ttggggcattggataagggggtaaaaatagaaatatagtattggaaaatagtgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaat 50295526  T
Q  316 caatgcaaa 324  Q
    |||||||||    
T  50295527 caatgcaaa 50295535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 47655372 - 47655477
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||| |||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||    
T  47655372 cattgaataaggggataaaaatagaagtatagcattgaaaaatggtgaaaattgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaatgc 47655470  T
Q  322 aaacatg 328  Q
    |||||||    
T  47655471 aaacatg 47655477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 11386093 - 11385981
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| |||| |||||  |||||||||||||||||||| ||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||||    
T  11386093 cttgggacattagataattggataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaa-ctttttaaaagtcaaaatgttgttgaaa 11385995  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  11385994 ccaatgcaaacatg 11385981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 29966935 - 29966822
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||| |||||||||||||||||||||||| |||||||| |||| |||||||  ||||||||||||||| || ||||| ||||||||||| |||||||||    
T  29966935 cttggagcattggataaggggataaaaatataaatatagcattgaaaaatggcaaaaaatgataaatttaattttttttaaagtcaaaatattgttgaaa 29966836  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  29966835 ccaatgcaaacatg 29966822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 33930070 - 33929966
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  33930070 attggataaggggataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaatgca 33929972  T
Q  323 aacatg 328  Q
    ||||||    
T  33929971 aacatg 33929966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 2125701 - 2125816
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||| |||||    
T  2125701 cttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgatgaaa 2125799  T
Q  315 ccaatgcaaacatgtta 331  Q
    | ||| ||| |||||||    
T  2125800 caaatacaaccatgtta 2125816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 24140883 - 24140773
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||||  ||| |||||| ||||||||||||||||||||||    
T  24140883 ttggggcattg-ataaggggataaaaatagaaatatactattggaaaatggtgaaacgtgataaa-cttaacttttttaaagtcaaaatgttgttgaaac 24140786  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  24140785 caatgcaaacatg 24140773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 221 - 328
Target Start/End: Original strand, 4940740 - 4940846
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||||||| ||||| ||||||||     
T  4940740 gcattggataaggggataaaaatagaaatatagcattggaaaatggttaaaagtgataaa-tttaactttttaaaagtcaaaatattgttaaaaccaata 4940838  T
Q  321 caaacatg 328  Q
    ||||||||    
T  4940839 caaacatg 4940846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 32213883 - 32213988
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| |||| |||||||||||||||||||||||| |  |||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  32213883 cttgggacattagataaggggataaaaatagaaatagaacattggaaaatggtgaaaagtgataaatttaat-tttttaaaagtcaaaatgttgttgaaa 32213981  T
Q  315 ccaatgc 321  Q
    |||||||    
T  32213982 ccaatgc 32213988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 40845356 - 40845253
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||| ||||||| ||||||||||||| ||    
T  40845356 cattgaataaggggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaa-tttaactttttaaaaatcaaaatattgttgaaaccaaagc 40845258  T
Q  322 aaaca 326  Q
    |||||    
T  40845257 aaaca 40845253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 52396549 - 52396443
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||| |||| |||||||||||||||||| || ||||||| |||    
T  52396549 ggcattggataaggggataaaaatagaaatatagtattgaaaaatgat-aaaagtgataaa-tttaactttttaaaagtcaaaatattattgaaacaaat 52396452  T
Q  320 gcaaacatg 328  Q
    |||||||||    
T  52396451 gcaaacatg 52396443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 7190469 - 7190581
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||| |||| |||||||||||||||||||| |||  |||||| |||||| ||||||| |||| |||||||||||| |||||| ||||||||    
T  7190469 cttggggcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaa-tttaactttttaaaagttaaaatggtgttgaaa 7190567  T
Q  315 ccaatgcaaacatg 328  Q
    | ||||||||||||    
T  7190568 ctaatgcaaacatg 7190581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 28850904 - 28851011
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||| |||||| | |||||||||||||||||  |||||||||||||||||| ||||||| |||| |||||||||||||||||  |||||||||    
T  28850904 cttggggcattagataagagaataaaaatagaaatataacattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaa-attgttgaaa 28851001  T
Q  315 ccaatgcaaa 324  Q
    ||||||||||    
T  28851002 ccaatgcaaa 28851011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 26469584 - 26469687
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||| |||||||||||| |||||||| |||| |||||  |||||||||||||| |||| |||||||||||||||||| || |||||||||||| |    
T  26469584 attggataaagggataaaaataaaaatatagcattgaaaaataatgaaaaatgataaa-tttaactttttaaaagtcaaaatattattgaaaccaatgaa 26469682  T
Q  323 aacat 327  Q
    |||||    
T  26469683 aacat 26469687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 28277484 - 28277591
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||||||||| |||||||||||||||||||  |||| |||||| | |||| |||||||||| | |||||||||| | ||||||||||||||| |||||||    
T  28277484 attggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaa-ctttttaaaaattaaaatgttgttgaaaacaatgca 28277582  T
Q  323 aacatgtta 331  Q
    |||||||||    
T  28277583 aacatgtta 28277591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 50154565 - 50154470
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    |||||||||| |||||||| |||| |||||| | ||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||    
T  50154565 gataaaaatataaatatagcattgaaaaatgataaaaaatgataaatttaacctttt-aaaagttaaaatgttgttgaaaccaatgcaaacatgtta 50154470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 44286984 - 44286869
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||  ||||  ||||||||||| ||||| |||||| || ||| ||||||||||||||| |||| |||||||||| | ||||| || || |||    
T  44286984 cttggggcattatataaaaggataaaaataaaaatacagtattagagaatagtgaaaaatgataaa-tttaactttttaaaaattaaaatattattaaaa 44286886  T
Q  315 ccaatgcaaacatgtta 331  Q
    |||||||||||||||||    
T  44286885 ccaatgcaaacatgtta 44286869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 45721864 - 45721773
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgtt 307  Q
    ||||| ||||||||||||| |||||||||| |||||||  ||||||||||||| |||| ||||||| |||| |||||||||| ||||||||||    
T  45721864 cttggagcattggataaggtgataaaaataaaaatataacattggaaaatggtaaaaactgataaa-tttaactttttaaaaatcaaaatgtt 45721773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 331
Target Start/End: Complemental strand, 47895413 - 47895331
Alignment:
Q  248 atatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    ||||||||||| ||||||||||||  |||||||||| | ||||||||| |||||||| |||||||||| |||||||||||||||    
T  47895413 atatagtattgaaaaatggtgaaaggtgataaatttaa-ctttttaaatgtcaaaatattgttgaaactaatgcaaacatgtta 47895331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 4656121 - 4656020
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||||||||||  ||||||||| |||||||  |||||||||| || |||| ||||||| |||| |||||||||| | |||||||||||||||| |||||    
T  4656121 cattggataaggaaataaaaataaaaatataacattggaaaatagtaaaaagtgataaa-tttaactttttaaaaattaaaatgttgttgaaactaatgc 4656023  T
Q  322 aaa 324  Q
    |||    
T  4656022 aaa 4656020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 5945532 - 5945447
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaa 301  Q
    ||||| ||||||||||| |  ||||||||||||||||   |||| ||||||||||||| |||||||||||| |||||||||||||||    
T  5945532 cttggagcattggataacgaaataaaaatagaaatatgacattgaaaaatggtgaaaagtgataaatttta-ctttttaaaagtcaa 5945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 14331949 - 14331852
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||||||| |||   |||||||||||||| || ||||||| |||||||||||||||| | | |||| |||||||||||||||||  ||||||||    
T  14331949 cttggggcattggttaaaatgataaaaatagaaacattgtattgggaaatggtgaaaaatga-agaatttaactttttaaaagtcaaaacattgttgaa 14331852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 16691406 - 16691309
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||||||| ||||  |||||||||||||| || ||||||| ||||||| |||||||| | | |||| |||||||||||||||||  ||||||||    
T  16691406 cttggggcattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatga-agaatttaactttttaaaagtcaaaacattgttgaa 16691309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 17403056 - 17402963
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||| |||||||||||||||  |||||| |||||  |||||||| |||| |||| || |||| |||||||||||||||||| ||||||||    
T  17403056 gggcattggttaaggggataaaaattaaaatattgtattaaaaaatggtaaaaagtgatgaa-tttaactttttaaaagtcaaaatattgttgaa 17402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 31975591 - 31975484
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||| | |||| |||||||||||||  |||| |||||| | |||| || ||||||| | |||||||||| ||||||| ||||| |||| ||||||    
T  31975591 attggataaagagatataaatagaaatataacattgaaaaatgataaaaagtggtaaatttaa-ctttttaaaaatcaaaatattgttaaaactaatgca 31975493  T
Q  323 aacatgtta 331  Q
    |||||||||    
T  31975492 aacatgtta 31975484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 48938727 - 48938651
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||||||||||| ||||| |||||||||||||| ||| ||||||   |||||||||||||||||  ||||||||    
T  48938727 gataaaaatagaaatattgtattagaaaatggtgaaaagtgaaaaattt--actttttaaaagtcaaaacattgttgaa 48938651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 8244200 - 8244150
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatg 265  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  8244200 cttggggcattggataaggggataaatatagaaatataacattggaaaatg 8244150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 43168249 - 43168156
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||| ||||  |||||||||||||| || ||||||| |||||||||||| ||| | | |||| |||||||||||||||||  ||||||||    
T  43168249 gggcattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtga-agagtttaactttttaaaagtcaaaacattgttgaa 43168156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 30222697 - 30222624
Alignment:
Q  251 tagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    ||||||| ||||||| || ||| |||||||||| || |||| |||||| ||||| |||||||||||||||||||    
T  30222697 tagtattagaaaatgatggaaagtgataaatttaattttttaaaaagttaaaatattgttgaaaccaatgcaaa 30222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 313
Target Start/End: Original strand, 44359666 - 44359763
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||| |||||| ||||  |||||||||||||| || |||| || |||||||||||| ||| | | |||| |||||||||||||||||  ||||||||    
T  44359666 cttgggccattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtga-agaatttaactttttaaaagtcaaaacattgttgaa 44359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 40920292 - 40920189
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaa--atgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    |||||| |||| |||||||||||||||||| | ||||  || |||||||||   |||| || |||| |||||||||||| ||||| |||||||| |||||    
T  40920292 cattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaa-tttaactttttaaaagttaaaatattgttgaatccaat 40920194  T
Q  320 gcaaa 324  Q
    |||||    
T  40920193 gcaaa 40920189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 41493015 - 41492912
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    |||||||| |||| |||||||| ||||||||| | ||||| || ||||||||| |||| ||||||| | |||||||||| ||||| ||| |||| || ||    
T  41493015 ggcattggttaagaggataaaa-tagaaatattgcattgggaagtggtgaaaagtgatgaatttta-cattttaaaagttaaaatattgatgaatcccat 41492918  T
Q  320 gcaaac 325  Q
    ||||||    
T  41492917 gcaaac 41492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 41898878 - 41898950
Alignment:
Q  240 aaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||||| |||||| |||||||| |||| |||| || |||| |||||||||||| ||||| ||||||||    
T  41898878 aaatagaaatattgtattgaaaaatggtaaaaagtgatgaa-tttaactttttaaaagttaaaatattgttgaa 41898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 8892785 - 8892852
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaa 303  Q
    |||||||||||||| || |||||||||||||||||||| | | | | |||| |||||||||||||||||    
T  8892785 gataaaaatagaaacatcgtattggaaaatggtgaaaagt-aaagaatttaactttttaaaagtcaaaa 8892852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 27210823 - 27210750
Alignment:
Q  229 taaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaa 303  Q
    |||| ||||||||||| || ||| ||| || |||||||||||||||||| || |||| |||||||||||| ||||    
T  27210823 taagaggataaaaataaaactattgtaatgaaaaatggtgaaaaatgatcaa-tttaactttttaaaagttaaaa 27210750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 30223025 - 30222991
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagta 255  Q
    |||||||||||||||||||||||| ||||||||||    
T  30223025 gcattggataaggggataaaaatataaatatagta 30222991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 6999312 - 6999202
Alignment:
Q  217 tggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaacc 316  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  6999312 tggggcaatggataaggagataaaaatagaaatatagtattggaaaatggtgaaaaatgataaa-tttaactttttaaaagtcaaaatgttgttgaaacc 6999214  T
Q  317 aatgcaaacatg 328  Q
    ||||||||||||    
T  6999213 aatgcaaacatg 6999202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 765147 - 765258
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  765147 cttggggcattggataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 765245  T
Q  315 ccaatgcaaacat 327  Q
    |||||||||||||    
T  765246 ccaatgcaaacat 765258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 2966645 - 2966544
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  2966645 cattggataaggggataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaat-tttttaaaagtcaaaatgttgttgaaaccaatgc 2966547  T
Q  322 aaa 324  Q
    |||    
T  2966546 aaa 2966544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 862697 - 862589
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||| |||||||||||||    
T  862697 gggcattgaataatgggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaa-tttaactttttaagagtcaaaatcttgttgaaaccaa 862599  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  862598 tgcaaacatg 862589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 39401532 - 39401643
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| ||||||  |||| |||||||||||||||||| |||||||||    
T  39401532 cttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataa--tttaactttttaaaagtcaaaattttgttgaaa 39401629  T
Q  315 ccaatgcaaacatg 328  Q
    ||||| ||||||||    
T  39401630 ccaatacaaacatg 39401643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 16361678 - 16361563
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||| |||||||||||||| |||||||||||||||||  ||||||||||||| |||| ||||||| |||| |||| |||||||||||||||||| ||||    
T  16361678 cttggagcattggataagggaataaaaatagaaatataacattggaaaatggtaaaaattgataaa-tttaactttataaaagtcaaaatgttgtcgaaa 16361580  T
Q  315 ccaatgcaaacatgtta 331  Q
    |||||||||||||||||    
T  16361579 ccaatgcaaacatgtta 16361563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 17603923 - 17603811
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||| | ||||||||||||||||||| |||| |||||| | |||||||||||| |||| ||||||||||||||||||||| ||||||    
T  17603923 cttggggcattggataacgcgataaaaatagaaatatagcattgaaaaatgataaaaaatgataaa-tttaactttttaaaagtcaaaatgttattgaaa 17603825  T
Q  315 ccaatgcaaacatg 328  Q
     |||||||||||||    
T  17603824 tcaatgcaaacatg 17603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 33726492 - 33726380
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||| |||| ||||||| ||||| |||||||||    
T  33726492 cttggggcattggataaggggataaaaataaaaatatagtattgaaaaatggtgaaaaataataaa-tttaactttctaaaagttaaaatattgttgaaa 33726394  T
Q  315 ccaatgcaaacatg 328  Q
     |||| ||||||||    
T  33726393 tcaatacaaacatg 33726380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 39085789 - 39085901
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| |||||||||| ||||||||||||||||||||  ||||||||||| | |||| ||||||| |||| ||||||||||||||||||||||||||||    
T  39085789 cttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 39085887  T
Q  315 ccaatgcaaacatg 328  Q
     |||||||||||||    
T  39085888 tcaatgcaaacatg 39085901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 41436582 - 41436478
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||| ||||||||||||||||| ||||||||||||| |||||| |||||| ||||||| || | ||||||||||||||||||||||||||||||||||||    
T  41436582 attgaataaggggataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaa-ctttttaaaagtcaaaatgttgttgaaaccaatgca 41436484  T
Q  323 aacatg 328  Q
    ||||||    
T  41436483 aacatg 41436478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 27495235 - 27495124
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||| ||||||||||||||||| |||||||  ||| |||||||||||||| ||||||| |||| | |||||||| |||||||||||||||||    
T  27495235 cttggggcattgaataaggggataaaaataaaaatataacattagaaaatggtgaaaagtgataaa-tttaacattttaaaaatcaaaatgttgttgaaa 27495137  T
Q  315 ccaatgcaaacat 327  Q
    |||||||||||||    
T  27495136 ccaatgcaaacat 27495124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 17118377 - 17118484
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||| |||||||||||||||||||| || ||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||||||    
T  17118377 cattggataaagggataaaaatagaaatataatactggaaaatgttgaaaaatgataaa-tttaactttttaaaactc-aaatgttgttgaaaccaatgc 17118474  T
Q  322 aaacatgtta 331  Q
    ||| ||||||    
T  17118475 aaatatgtta 17118484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 1321280 - 1321168
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||| |||||||||||| |||||||||||||||||||  ||||||||||||| |||||| ||||| |||| || ||||||| |||||||||||||||||    
T  1321280 cttggagcattggataagaggataaaaatagaaatataacattggaaaatggtaaaaaataataaa-tttaactctttaaaaatcaaaatgttgttgaaa 1321182  T
Q  315 ccaatgcaaacatg 328  Q
     ||||| |||||||    
T  1321181 tcaatgtaaacatg 1321168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 35445291 - 35445400
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||| |||||||||| |  |||| |||||||||||| |||||||||||||    
T  35445291 gggcattgaataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttgaaaccaa 35445390  T
Q  319 tgcaaacatg 328  Q
    | ||||||||    
T  35445391 tacaaacatg 35445400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 9201499 - 9201606
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||| | ||||||||||| |||||| ||||  ||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| |    
T  9201499 cattggataatgagataaaaataggaatataatattaaaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttg-aaccaatac 9201596  T
Q  322 aaacatgtta 331  Q
    ||||||||||    
T  9201597 aaacatgtta 9201606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 17095068 - 17095171
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||| ||||||||||||||||||||    |  ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  17095068 gggcattggataaagggataaaaatagaaatataactcta-aaaatggtgaaaagtgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaa 17095165  T
Q  319 tgcaaa 324  Q
    ||||||    
T  17095166 tgcaaa 17095171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 33864460 - 33864352
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||| ||||| ||||||||||| |||||| | |||||||||||||||||| | |||||||| | | |||||||||||||||| ||||||||||||||||    
T  33864460 cattgaataagaggataaaaataaaaatatcgcattggaaaatggtgaaaagtaataaatttaa-cattttaaaagtcaaaatattgttgaaaccaatgc 33864362  T
Q  322 aaacatgtta 331  Q
    ||| ||||||    
T  33864361 aaatatgtta 33864352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 44173211 - 44173120
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||| || ||||||||| | |||||||||||||||||||| |||||||    
T  44173211 gataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaat-tttttaaaaattaaaatgttgttgaaaccaatacaaacat 44173120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 320
Target Start/End: Original strand, 44299679 - 44299782
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||||||||| |||| ||||||||||||||||||||  | | ||||||||||||| ||||||| |||| | |||||||||||||||| ||||||||||    
T  44299679 ttggggcattgggtaagaggataaaaatagaaatatagcctcgaaaaatggtgaaaagtgataaa-tttaacattttaaaagtcaaaatattgttgaaac 44299777  T
Q  316 caatg 320  Q
    |||||    
T  44299778 caatg 44299782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 13997913 - 13998022
Alignment:
Q  227 gataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaaca 326  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| |||| |||||||||| | ||||| ||||||||| |||| ||||||    
T  13997913 gataagggaataaaaatagaaatatagcattgaaaaattgtgaaaaatgataaa-tttaactttttaaaaattaaaatattgttgaaatcaatacaaaca 13998011  T
Q  327 tgttagcaaga 337  Q
    || || |||||    
T  13998012 tgctaacaaga 13998022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 17056059 - 17056162
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||| |||||||||| |||||||||  | |  ||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||    
T  17056059 gggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaa-ctttttaaaagacaaaatgttgttgaaaccaa 17056156  T
Q  319 tgcaaa 324  Q
    ||||||    
T  17056157 tgcaaa 17056162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 17068506 - 17068609
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||| |||||||||| |||||||||  | |  ||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||    
T  17068506 gggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaa-ctttttaaaagacaaaatgttgttgaaaccaa 17068603  T
Q  319 tgcaaa 324  Q
    ||||||    
T  17068604 tgcaaa 17068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 227 - 331
Target Start/End: Complemental strand, 464896 - 464792
Alignment:
Q  227 gataaggggataaaaatagaaatatagtattggaaaatggtgaaaaa-tgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaac 325  Q
    ||||| ||||||||||||||||||||  |||| |||||||| ||||| |||||| ||||| |||||||||||| |||||||| |||||| |||| |||||    
T  464896 gataaagggataaaaatagaaatataacattgaaaaatggtaaaaaaatgataa-ttttaactttttaaaagttaaaatgttattgaaatcaatacaaac 464798  T
Q  326 atgtta 331  Q
    ||||||    
T  464797 atgtta 464792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 17074489 - 17074592
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||| ||||| ||||||||||||||||||||  | |  ||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||| ||    
T  17074489 gggcattagataaagggataaaaatagaaatataacacta-aaaatggtgaaaagtgataaatttaa-ctttttaaaagacaaaatgttgttgaaactaa 17074586  T
Q  319 tgcaaa 324  Q
    ||||||    
T  17074587 tgcaaa 17074592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 23685688 - 23685764
Alignment:
Q  254 tattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||    
T  23685688 tattggaaaatggggaaaagtgataaatttaa-ctttttaaaagtcaaaatgttattgaaatcaatgcaaacatgtta 23685764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 11445382 - 11445431
Alignment:
Q  282 tttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  11445382 tttaactttttaaatgtcaaaatgttgttgaaaccaatgcaaacatgtta 11445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 34334167 - 34334270
Alignment:
Q  224 ttggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaa 323  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||| |||||||| ||| || | ||||||| || | ||||| |||||||| ||||| |||    
T  34334167 ttggataagatgataaaaatagaaatattgtatttgaaaatggtaaaaaatgacaaa-ttaaactttttacaaattaaaatattgttgaatccaatacaa 34334265  T
Q  324 acatg 328  Q
    |||||    
T  34334266 acatg 34334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 2239687 - 2239586
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||| |||| ||||||| |||||||||| | | || |||||||| ||||||||| ||||| | |||||||||||| ||||| |||||||| ||||| |    
T  2239687 cattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaa-ctttttaaaagttaaaatattgttgaatccaatac 2239589  T
Q  322 aaa 324  Q
    |||    
T  2239588 aaa 2239586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 43140328 - 43140419
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||||||| ||||||||||| |||||||  |||| ||||||  ||||||||||||| |||| |||||||||| | ||||| || |||||||    
T  43140328 attggataagaggataaaaataaaaatataacattgaaaaatgacgaaaaatgataaa-tttaactttttaaaattaaaaatattattgaaac 43140419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 15004987 - 15004927
Alignment:
Q  267 tgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||| |||||||||| | |||||||||| | |||||||||||||||||||| ||||||||    
T  15004987 tgaaaagtgataaatttaa-ctttttaaaaattaaaatgttgttgaaaccaatacaaacatg 15004927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 11445313 - 11445356
Alignment:
Q  240 aaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  11445313 aaatagaaatataacattgaaaaatggtgaaaaatgataaattt 11445356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 313
Target Start/End: Original strand, 34220650 - 34220740
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||| |||| |||||||||||||||| | | ||||| || ||||||||| |||| || ||||  ||||||||||| ||||| ||||||||    
T  34220650 cattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaa-tttaagtttttaaaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 2805488 - 2805382
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttta-tctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    |||||| |||| ||||||||||| || ||| |||||| |||||  | |||| |||| ||||| | | ||||||||||||||||| |||||||| | |||     
T  2805488 cattggttaagaggataaaaatataagtattgtattgaaaaataattaaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaata 2805389  T
Q  321 caaacat 327  Q
    |||||||    
T  2805388 caaacat 2805382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 11659374 - 11659277
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||| ||||| | |||| ||||||||||| |||||| |||||| ||||| ||||||| ||| | | |||| |||||||||| | ||||| ||||||||    
T  11659374 cttggagcattcgttaagaggataaaaataaaaatattgtattgaaaaatagtgaaaagtga-agaatttaactttttaaaaattaaaatattgttgaa 11659277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 12695233 - 12695286
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtg 268  Q
    ||||| ||||||| ||||  |||||||||||||| || ||||||||||||||||    
T  12695233 cttggagcattggttaagatgataaaaatagaaacattgtattggaaaatggtg 12695286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 1729592 - 1729528
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    ||||||||| |||| ||| |||  ||||||| | |||||| ||||||||||||||||||| ||||    
T  1729592 gggcattggttaagaggacaaacttagaaatgttgtattgaaaaatggtgaaaaatgatagattt 1729528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 34316342 - 34316378
Alignment:
Q  236 ataaaaatagaaatatagtattggaaaatggtgaaaa 272  Q
    |||||||||||||||| |||||| |||||||||||||    
T  34316342 ataaaaatagaaatattgtattgaaaaatggtgaaaa 34316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 37230311 - 37230267
Alignment:
Q  236 ataaaaatagaaatatagtattggaaaatggtgaaaaatgataaa 280  Q
    |||| ||||||||||| |||||| ||||||||||||| |||||||    
T  37230311 ataagaatagaaatattgtattgaaaaatggtgaaaagtgataaa 37230267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 43567503 - 43567615
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  43567503 cttggggcattggataaggagataaaaatagaattatagtattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 43567601  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  43567602 ccaatgcaaacatg 43567615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 29034799 - 29034687
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  29034799 cttgaggcattggataaggggataaaaatataaatatagtattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 29034701  T
Q  315 ccaatgcaaacatg 328  Q
    | ||||||||||||    
T  29034700 ctaatgcaaacatg 29034687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 5240329 - 5240441
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  5240329 cttgaggcattggataaagggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttattgaaa 5240427  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  5240428 ccaatgcaaacatg 5240441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 40763361 - 40763253
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  40763361 cttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaa-tttaactttttaaaagttaaaatgttgttgaaa 40763263  T
Q  315 ccaatgcaaa 324  Q
    ||||||||||    
T  40763262 ccaatgcaaa 40763253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 42222326 - 42222218
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||| |    
T  42222326 cattagataaggggataaaaatagaaatatggtattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaaccaatac 42222228  T
Q  322 aaacatgtta 331  Q
    ||||||||||    
T  42222227 aaacatgtta 42222218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 8380553 - 8380442
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  8380553 cttggggtattggataaggggataaaaataaaaatatagcattggaaaatgatgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 8380455  T
Q  315 ccaatgcaaacat 327  Q
    |||||| ||||||    
T  8380454 ccaatgaaaacat 8380442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 43958087 - 43958195
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||| ||  ||||||||||||    
T  43958087 cattggataaggcgataaaaatagaaatatagtattagaaaattgtgaaaaatgataaatttaat-tttttaaaagtcaaaatattactgaaaccaatgc 43958185  T
Q  322 aaacatgtta 331  Q
    ||||||||||    
T  43958186 aaacatgtta 43958195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 8292856 - 8292745
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||  ||||||||||||||||||||||||||||     
T  8292856 ttggagcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagttataaa-tttgcctttttaaaagtcaaaatgttgttgaaat 8292758  T
Q  316 caatgcaaacatg 328  Q
    |||| ||||||||    
T  8292757 caatccaaacatg 8292745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 27053494 - 27053601
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||| ||||||||||||||||||||| ||  |||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||    
T  27053494 gggcattggataaagggataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaaccaa 27053592  T
Q  319 tgcaaacat 327  Q
    |||||||||    
T  27053593 tgcaaacat 27053601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 7322958 - 7323062
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||||||||| |||||||||||||||||||   ||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  7322958 attggataagaggataaaaatagaaatataaccttgaaaaatggtgaaaagtgataaatttaat-tttttaaaagtcaaaatgttgttgaaaccaatgca 7323056  T
Q  323 aacatg 328  Q
    ||||||    
T  7323057 aacatg 7323062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 22521694 - 22521586
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||| ||| || ||||||| |||| ||| ||||||||||||||||||||||||||||    
T  22521694 gggcattggataagaggataaaactagaaatatagcattggaaaatgatgagaagtgataaa-tttaacttcttaaaagtcaaaatgttgttgaaaccaa 22521596  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  22521595 tgcaaacatg 22521586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 24359713 - 24359817
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| ||||  |||||| |||| |||||||||||| |||||||||||||||||||||||    
T  24359713 attggataaggggataaaaatagaaatatagcaatggaaaatggtaaaaagggataaa-tttaactttttaaaagttaaaatgttgttgaaaccaatgca 24359811  T
Q  323 aacatg 328  Q
    ||||||    
T  24359812 aacatg 24359817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 22707159 - 22707049
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||||||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||||||| || |||||||||||||    
T  22707159 ttggggcattgaataaagg-ataaaaatagaaatatagcattggaaaataatgaaaaatgataaatttta-ctttttaaaagttaacatgttgttgaaac 22707062  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  22707061 caatgcaaacatg 22707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 216 - 331
Target Start/End: Complemental strand, 49069666 - 49069552
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||| | || |||||||||| |||| || ||||||||||    
T  49069666 ttggggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaa-tctaactttttaaaaatcaatatattgttgaaac 49069568  T
Q  316 caatgcaaacatgtta 331  Q
    |||| |||||||||||    
T  49069567 caatacaaacatgtta 49069552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 30538477 - 30538589
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||||| ||||||   ||||||||    
T  30538477 cttgggacattagataaggggataaaaatagaaatatagtattagaaaatagtgaaaaatgataaa-tttaactttttaaaaatcaaaa---tgttgaaa 30538572  T
Q  315 ccaatgcaaacatgtta 331  Q
     ||||||||||||||||    
T  30538573 tcaatgcaaacatgtta 30538589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 217 - 327
Target Start/End: Original strand, 41188785 - 41188894
Alignment:
Q  217 tggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaacc 316  Q
    ||||||||| |||||| ||||||||||| |||||||| |||||||||||||||||  ||||||| |||| ||||||||||||||||||| |||||||| |    
T  41188785 tggggcatttgataagaggataaaaatataaatatagcattggaaaatggtgaaaggtgataaa-tttaactttttaaaagtcaaaatgctgttgaaatc 41188883  T
Q  317 aatgcaaacat 327  Q
    |||||||||||    
T  41188884 aatgcaaacat 41188894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 40066915 - 40067021
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||    
T  40066915 ttggtgcattggataaggggataaaaatagaaatataatattgaaaaatggtgaaaaatgataaa-tttaactttttaaaaat-aaaatgttgttaaaac 40067012  T
Q  316 caatgcaaa 324  Q
    |||| ||||    
T  40067013 caatacaaa 40067021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 224 - 323
Target Start/End: Complemental strand, 3681797 - 3681699
Alignment:
Q  224 ttggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaa 323  Q
    ||||||||||||||||||||| ||||| |  |||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  3681797 ttggataaggggataaaaataaaaatacaacattggaaaatggtgaaaagtgataaa-tttaactttttaaaagttaaaatgttgttgaaaccaatgcaa 3681699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 1910351 - 1910244
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||| |||||||| |||||||||||||||||  ||| |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||    
T  1910351 gggcatttgataaggg-ataaaaatagaaatataacattagaaaatggtgaaaaatgataaa-tttaactttttaaaagttaaaatgttgttgaaacaaa 1910254  T
Q  319 tgcaaacatg 328  Q
    || |||||||    
T  1910253 tgtaaacatg 1910244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 48454819 - 48454907
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaat 304  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||| |||| ||||||||||||||||||    
T  48454819 cttggggcattggataaggggataaaaatagaaatataacattgggaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaat 48454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 233 - 328
Target Start/End: Complemental strand, 40194920 - 40194826
Alignment:
Q  233 gggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||||||||| ||||||||||||  ||| || |||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  40194920 gggataaaaatataaatatagtattataaattgatgaaaagtgataaatttaat-tttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 40194826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 36279231 - 36279139
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttg 308  Q
    |||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||| ||||||| |||| |||||||||| |||||||||||    
T  36279231 cttggggcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttaaaaatcaaaatgttg 36279139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 46478560 - 46478667
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||||||||||||||||||||||  |||| ||||| ||| ||||||||||| |||| |||||||||||| ||||| |||||||||| |||||    
T  46478560 cattggataaggggataaaaatagaaatatatcattgaaaaatagtg-aaaatgataaa-tttaactttttaaaagttaaaatattgttgaaactaatgc 46478657  T
Q  322 aaacatgtta 331  Q
    ||| ||||||    
T  46478658 aaatatgtta 46478667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 8258640 - 8258746
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||| ||||||||||||||||||||||||||     || ||||||||||||| |||||||||| | |||||||| ||||| ||| |||||||||    
T  8258640 cttggggcatcggataaggggataaaaatagaaatat-----tgaaaaatggtgaaaagtgataaatttaa-ctttttaatagtcataattttgttgaaa 8258733  T
Q  315 ccaatgcaaacat 327  Q
    |||||||||||||    
T  8258734 ccaatgcaaacat 8258746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 5347973 - 5348078
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||||| ||||||| ||| |||||||||||||  ||||||||||| |||||| ||||||| |||| |||||||||||||||||   ||||||||||||    
T  5347973 gggcattgaataagggaatataaatagaaatataacattggaaaatgatgaaaagtgataaa-tttaactttttaaaagtcaaaa---tgttgaaaccaa 5348068  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  5348069 tgcaaacatg 5348078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 46042838 - 46042749
Alignment:
Q  236 ataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||| | |||||| |||||| |||||||||||||||||||||||||||    
T  46042838 ataaaaatagaaatatagtattg-aaaatggtgaaaagttataaatttaa-cttttttaaagtctaaatgttgttgaaaccaatgcaaacat 46042749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 228 - 325
Target Start/End: Original strand, 31626051 - 31626147
Alignment:
Q  228 ataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaac 325  Q
    |||||| |||||||||| ||||||| ||||  |||||| |||||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||    
T  31626051 ataaggagataaaaataaaaatataatattaaaaaatgatgaaaagtgataaatttaa-ctttttaaaaatcaaaatgttgttgaaaccaatgcaaac 31626147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 42291371 - 42291284
Alignment:
Q  238 aaaaatagaaatatagtattggaaaa-tggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    |||||||||||||| ||||||||||| | ||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||||    
T  42291371 aaaaatagaaatattgtattggaaaaatagtgaaaaataataaattttatttttttaaaagttaaaatattgttgaatccaatgcaaa 42291284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 29687547 - 29687476
Alignment:
Q  256 ttggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    ||||||||||||||||| |||| ||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  29687547 ttggaaaatggtgaaaagtgatgaatttaa-ctttttaaaagttaaaatgttgttgaaaccaatgcaaacatg 29687476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 1907593 - 1907697
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||||||||  ||||||||| |||||||| |||||| |||||||| |||||| || ||||| || ||||||| | ||||||| ||||||||  ||||||    
T  1907593 cattggataaaaggataaaaagagaaatattgtattgaaaaatggtaaaaaataatgaatttaat-tttttaataatcaaaatattgttgaatgcaatgc 1907691  T
Q  322 aaacat 327  Q
    ||||||    
T  1907692 aaacat 1907697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 30388693 - 30388760
Alignment:
Q  251 tagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||||||||||| || |||||| ||||    
T  30388693 tagtattgaaaaatggtgaaaaatgataaa-tttaactttttaaaagtcaaaatattattgaaatcaat 30388760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 31360309 - 31360357
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    ||||||||||||||||| ||||||| ||||||| |||| ||||||||||    
T  31360309 gataaaaatagaaatattgtattgggaaatggtaaaaagtgataaattt 31360357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 6548602 - 6548533
Alignment:
Q  255 attggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaac 325  Q
    ||||| ||| ||||||||||||| ||||| | |||||||||||| ||||| |||||| | |||||||||||    
T  6548602 attgggaaacggtgaaaaatgatgaatttaa-ctttttaaaagttaaaatattgttggatccaatgcaaac 6548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 327
Target Start/End: Complemental strand, 29959097 - 29959068
Alignment:
Q  298 tcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||||||||||||||||||||||||||    
T  29959097 tcaaaatgttgttgaaaccaatgcaaacat 29959068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 32204270 - 32204186
Alignment:
Q  239 aaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    ||||||||||||| | |||| |||||| |||||| |||| || |||| |||||||||||| ||||| || |||||  |||||||||    
T  32204270 aaaatagaaatattgcattgaaaaatgatgaaaagtgatgaa-tttaactttttaaaagttaaaatatttttgaatacaatgcaaa 32204186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 37869384 - 37869429
Alignment:
Q  238 aaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    ||||||| |||||| ||||||||||||| |||||||||||| ||||    
T  37869384 aaaaataaaaatattgtattggaaaatgatgaaaaatgatatattt 37869429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 42552489 - 42552579
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||||||| |||||| || ||| ||||| || |||||| || ||||  | |||||||||||||||||| ||||| ||  ||||||||||||    
T  42552489 gataaaaataaaaatattgtgttgaaaaatagtaaaaaataatgaatt--aactttttaaaagtcaaaatattgttaaattcaatgcaaacat 42552579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 3720131 - 3720198
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaa 303  Q
    ||||||||||| ||||| | ||||  |||||||| ||||||||||| |||| |||||||||||| ||||    
T  3720131 gataaaaatagtaatattgcattgacaaatggtgtaaaatgataaa-tttaactttttaaaagttaaaa 3720198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 3e-40; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 36730155 - 36730262
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  36730155 ggcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaaccaat 36730253  T
Q  320 gcaaacatg 328  Q
    |||||||||    
T  36730254 gcaaacatg 36730262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 216 - 331
Target Start/End: Original strand, 4759848 - 4759962
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||| ||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  4759848 ttggagcattggataaagggataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaac 4759946  T
Q  316 caatgcaaacatgtta 331  Q
    ||||||||||||||||    
T  4759947 caatgcaaacatgtta 4759962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 8715503 - 8715610
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  8715503 gggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaa 8715600  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  8715601 tgcaaacatg 8715610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 9067390 - 9067497
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  9067390 gggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaa 9067487  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  9067488 tgcaaacatg 9067497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 29915572 - 29915683
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||| |||||||    
T  29915572 cttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaa-tttaactttttaaaagtcaaaatgtggttgaaa 29915670  T
Q  315 ccaatgcaaacat 327  Q
    |||||||||||||    
T  29915671 ccaatgcaaacat 29915683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 29964725 - 29964836
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||| |||||||    
T  29964725 cttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaa-tttaactttttaaaagtcaaaatgtggttgaaa 29964823  T
Q  315 ccaatgcaaacat 327  Q
    |||||||||||||    
T  29964824 ccaatgcaaacat 29964836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 46317591 - 46317483
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||  ||||||||||||||||||  ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  46317591 cattggataagtagataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccaatgc 46317493  T
Q  322 aaacatgtta 331  Q
    ||||||||||    
T  46317492 aaacatgtta 46317483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 32415681 - 32415566
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| |||||||||||| ||||||||||||||||||||| |||| ||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||    
T  32415681 cttgaggcattggataaagggataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaa-ctttttaaaagtcaaaatgttgttgaaa 32415583  T
Q  315 ccaatgcaaacatgtta 331  Q
    |||||||||||||||||    
T  32415582 ccaatgcaaacatgtta 32415566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 216 - 331
Target Start/End: Original strand, 44695669 - 44695783
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||| |||||||||| | |||||||||||||||     
T  44695669 ttgggacattggataaggggataaaaatataaatataatcttggaaaatggtgaaaaatgataaa-tttaactttttaaaaattaaaatgttgttgaaat 44695767  T
Q  316 caatgcaaacatgtta 331  Q
    ||||||||||||||||    
T  44695768 caatgcaaacatgtta 44695783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 216 - 331
Target Start/End: Complemental strand, 37509222 - 37509108
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||||||||||||||||||||||||||| |||||  || |||||||||| ||||||| ||||||| |||| |||||||||||||||||| ||||||||||    
T  37509222 ttggggcattggataaggggataaaaattgaaatgcagcattggaaaatagtgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaac 37509124  T
Q  316 caatgcaaacatgtta 331  Q
    ||||||||| ||||||    
T  37509123 caatgcaaatatgtta 37509108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 328
Target Start/End: Original strand, 12905292 - 12905391
Alignment:
Q  227 gataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaaca 326  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  12905292 gataaggggataaaaatagaaatataacattg-aaaatggtgaaaaatgataaatttaa-cattttaaaagtcaaaatgttgttgaaaccaatgcaaaca 12905389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 44570383 - 44570495
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||| ||||| ||||| ||||||||||||||  |||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||    
T  44570383 cttggggcattcgataaagggatcaaaatagaaatataacattggaaaatggtgaaaagtgat-aactttaactttttaaaagtcaaaatgttgttgaaa 44570481  T
Q  315 ccaatgcaaacatg 328  Q
     |||||||||||||    
T  44570482 tcaatgcaaacatg 44570495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 10854975 - 10854859
Alignment:
Q  215 cttggggcattggataaggggat----aaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgtt 310  Q
    |||||||||||||||||||||||    |||| ||||||||||| |||||||||||||||||| | |||||||| | |||||||||||| |||||||||||    
T  10854975 cttggggcattggataaggggatggataaaagtagaaatatagcattggaaaatggtgaaaactaataaatttaa-ctttttaaaagttaaaatgttgtt 10854877  T
Q  311 gaaaccaatgcaaacatg 328  Q
    ||||||||||||||||||    
T  10854876 gaaaccaatgcaaacatg 10854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 52570872 - 52570783
Alignment:
Q  237 taaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||||| ||||||||||||||||||||||    
T  52570872 taaaaatagaaatatagtattggaaaatggtgaaaagtgataaa-tataactttttaaaagtcaaaatattgttgaaaccaatgcaaacat 52570783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 35306436 - 35306332
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||| |||| |||||||||||| |||||||| |||||| |||||||    
T  35306436 attggataaggggataaaaatagaaatataacattggaaaatgatgaaaagtgataaa-tttaactttttaaaagttaaaatgttattgaaatcaatgca 35306338  T
Q  323 aacatg 328  Q
    ||||||    
T  35306337 aacatg 35306332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 51817313 - 51817421
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||| ||    
T  51817313 gggcattgaataagaggataaaaataaaaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaactaa 51817411  T
Q  319 tgcaaacatg 328  Q
    | ||||||||    
T  51817412 tacaaacatg 51817421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 8847449 - 8847561
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||| |||| || |||| |||||||||||| ||||| |||||||||    
T  8847449 cttgggacattggataaggggataaaaatagaaatataacattggaaaatggtaaaaagtgattaa-tttaactttttaaaagttaaaatattgttgaaa 8847547  T
Q  315 ccaatgcaaacatg 328  Q
     ||||| |||||||    
T  8847548 acaatgtaaacatg 8847561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 12051142 - 12051038
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    |||||||||||  ||||||||||||||||||||||| |||||  |||||||||||||| |||| |||||||||| | ||||||||||||||| |||||||    
T  12051142 attggataaggaaataaaaatagaaatatagtattgtaaaataatgaaaaatgataaa-tttaactttttaaaaattaaaatgttgttgaaaacaatgca 12051044  T
Q  323 aacatg 328  Q
    ||||||    
T  12051043 aacatg 12051038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 25102319 - 25102426
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||| |||||||||| | ||||||||||||||||||| ||||||||||||| |||| |||||||  |||  ||||| ||||| ||||| |||||||||    
T  25102319 cttgggacattggataatgagataaaaatagaaatatagcattggaaaatggtaaaaagtgataaa--ttaatttttttaaagttaaaatattgttgaaa 25102416  T
Q  315 ccaatgcaaa 324  Q
    ||||||||||    
T  25102417 ccaatgcaaa 25102426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 1804000 - 1803932
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||    
T  1804000 cttggggcattggataaggggataaaaatagaaatatattattgaaaaagggtaaaaaatgataaattt 1803932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 45899540 - 45899652
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaa-tgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||||||||||| | ||||||||||||||||  |||||||||||| ||||||| |||| || ||||  ||||||||||||||||| ||||||||    
T  45899540 cttggggcattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaa-tttaaatttttaaaagtcaaaatattgttgaa 45899638  T
Q  314 accaatgcaaacat 327  Q
      ||||| ||||||    
T  45899639 ttcaatgtaaacat 45899652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 20227405 - 20227492
Alignment:
Q  243 tagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    ||||||||||| |||| |||||| |||||| |||||||||| | ||| |||||||| |||||||| ||||||||||| |||||||||||    
T  20227405 tagaaatatagcattgaaaaatgatgaaaagtgataaatttaa-cttcttaaaagttaaaatgttattgaaaccaatacaaacatgtta 20227492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 320
Target Start/End: Original strand, 18788 - 18888
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||| |||| |||||||||||||||||| | ||||| ||| |||||||| |||| || |||| |||||||||| | ||||| |||||||| ||||    
T  18788 gggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaa-tttaactttttaaaaattaaaatattgttgaatccaa 18886  T
Q  319 tg 320  Q
    ||    
T  18887 tg 18888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 31647364 - 31647304
Alignment:
Q  267 tgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||    
T  31647364 tgaaaaatgataaatttaa-ctttttaaaagtcaaaatgttattgaaatcaatgcaaacatg 31647304  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 34060786 - 34060873
Alignment:
Q  238 aaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaaca 326  Q
    ||||||| |||||| |||||| ||||||||||||| |||| || |||| |||||||||||| ||||| ||||||||  |||||||||||    
T  34060786 aaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaa-tttaactttttaaaagttaaaatattgttgaattcaatgcaaaca 34060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 41346386 - 41346346
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagta 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41346386 cttggggcattggataaggggataaaaatagaaatatagta 41346346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 48136720 - 48136776
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaa 271  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  48136720 cttggggtattggataagggaataaaaatagaaatatagcattggaaaattgtgaaa 48136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 41346050 - 41345977
Alignment:
Q  252 agtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaaca 326  Q
    ||||||| ||||| ||||||| | |||||||| || ||||||||||| ||||| |||||||||||||||||||||    
T  41346050 agtattgaaaaatagtgaaaagtaataaatttaat-tttttaaaagttaaaatattgttgaaaccaatgcaaaca 41345977  T

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Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 11675405 - 11675320
Alignment:
Q  233 gggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||||||||||||||||| |||||| ||||||||  |||||||  || |||| ||||||||| |||||||| |||||||| |||||||    
T  11675405 gggataaaaatagaaatattgtattgaaaaatggt--aaaatgacgaa-tttaactttttaaatgtcaaaatattgttgaatccaatgc 11675320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 2022851 - 2022788
Alignment:
Q  20 gaagtagcaaattttctcttgcaaaataaacatgaaaaagaccttgaatccaaatttttctctt 83  Q
    ||||||| ||||||||||||||||||  |||||||||||||| |||||||  |||| |||||||    
T  2022851 gaagtagaaaattttctcttgcaaaaacaacatgaaaaagactttgaatctgaattcttctctt 2022788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 39436563 - 39436493
Alignment:
Q  229 taaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtca 300  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||| | | | |||| ||||||||||||||    
T  39436563 taagaggataaaaatagaaatattgtattgaaaaatggtgaaaaat-aaagaatttaactttttaaaagtca 39436493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3156968 - 3157034
Alignment:
Q  17 tgtgaagtagcaaattttctcttgcaaaataaacatgaaaaagaccttgaatccaaatttttctctt 83  Q
    |||||||||| ||||| |||||| |||||  | ||||||||||||||||||||| |||| |||||||    
T  3156968 tgtgaagtagaaaattgtctcttacaaaaggagcatgaaaaagaccttgaatccgaattcttctctt 3157034  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 18946 - 19029
Alignment:
Q  236 ataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    |||||||||||||||| | ||||| ||| |||||||| |||| || |||| |||||||||| | ||||| |||||||| ||||||    
T  18946 ataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaa-tttaactttttaaaaattaaaatattgttgaatccaatg 19029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3167302 - 3167250
Alignment:
Q  17 tgtgaagtagcaaattttctcttgcaaaataaacatgaaaaagaccttgaatc 69  Q
    ||||| |||| ||||||||||||||||||  |||||||||||||| |||||||    
T  3167302 tgtgatgtagaaaattttctcttgcaaaaacaacatgaaaaagactttgaatc 3167250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 49976157 - 49976232
Alignment:
Q  234 ggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgtt 310  Q
    |||||||||||||| ||| ||||||   ||||||||||| |||| || |||| |||||||||||||||||| |||||    
T  49976157 ggataaaaatagaattattgtattgactaatggtgaaaagtgatgaa-tttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 11317048 - 11316970
Alignment:
Q  245 gaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    ||||||| || ||||||||||||||||| | || ||||| | |||||||||||||||||| || ||||| | ||||||||    
T  11317048 gaaatattgttttggaaaatggtgaaaagttatgaatttaa-ctttttaaaagtcaaaatattattgaatctaatgcaaa 11316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 12060057 - 12060153
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||| ||||| |||| ||| |||  ||||||||| ||||||||||||| |||||| ||||| |||| |  ||||||||||| ||||  ||||||||    
T  12060057 ttggggtattggttaagaggacaaatttagaaatattgtattggaaaatgatgaaaagtgatagatttga-gtttttaaaagttaaaaaattgttgaa 12060153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 44019107 - 44019172
Alignment:
Q  205 aaggtgaatgcttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaa 270  Q
    |||| |||| ||||| |||||| ||||||||||||||||| |||||||  |||  |||||||||||    
T  44019107 aaggagaatccttggagcattgaataaggggataaaaatataaatatatcattaaaaaatggtgaa 44019172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 48313836 - 48313932
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||||  ||||   ||||||||||||| || ||||||| ||||||||||||  || |||||| | |||||||||| ||||||  ||||||||    
T  48313836 ttggggcattgattaagatcataaaaatagaaacattgtattgggaaatggtgaaaagcgaaaaatttga-ctttttaaaaatcaaaacattgttgaa 48313932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 21324603 - 21324521
Alignment:
Q  239 aaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaa 323  Q
    ||||||||||||| | |||||||| || |||||| ||||| |||| | |||||||||||| ||||| |||||||| || ||||||    
T  21324603 aaaatagaaatattgcattggaaa-tgatgaaaagtgatagatttaa-ctttttaaaagttaaaatattgttgaatccgatgcaa 21324521  T

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Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 19389307 - 19389419
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||| | |||||||    
T  19389307 cttggggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaa-tttaactttttaaaagtcaaaatatcgttgaaa 19389405  T
Q  315 ccaatgcaaacatg 328  Q
     |||||||||||||    
T  19389406 acaatgcaaacatg 19389419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 21016345 - 21016234
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | |||| ||||||||||||||||||||||||||| |    
T  21016345 ttggggctttggataaggggataaaaatagaaatataatattgaaaaatggtgaaaagtgataga-tttaactttttaaaagtcaaaatgttgttgaagc 21016247  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  21016246 caatgcaaacatg 21016234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 25249345 - 25249450
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  25249345 cattggataagggggtaaaaataaaaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaaccaatgc 25249443  T
Q  322 aaacatg 328  Q
    |||||||    
T  25249444 aaacatg 25249450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 18069062 - 18068963
Alignment:
Q  227 gataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaaca 326  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  18069062 gataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa-tttaactttttaaaggtcaaaatgttgttgaaactaatgcaaaca 18068964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 45338112 - 45338005
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| |||| |||||||||| |||||||||| |||| |||||    
T  45338112 gggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaaatgataaa-tttaactttttaaaaatcaaaatgttattgagaccaa 45338014  T
Q  319 tgcaaacat 327  Q
    |||||||||    
T  45338013 tgcaaacat 45338005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 6939268 - 6939155
Alignment:
Q  217 tggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaacc 316  Q
    |||||||||| |||| | ||||||||||||||||||  |||| |||||||||| || |||||||||| | ||||||||||||||||||||||||||||||    
T  6939268 tggggcattgaataatgagataaaaatagaaatataacattgaaaaatggtgacaagtgataaatttaa-ctttttaaaagtcaaaatgttgttgaaacc 6939170  T
Q  317 aatgcaaacatgtta 331  Q
    |||||||||||||||    
T  6939169 aatgcaaacatgtta 6939155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 8018866 - 8018765
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgc 321  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||| |||| |||||    
T  8018866 cattggataaggggataaaaatagaaatataatattggaaaatggtgaaaagtgataaa-tttaactttttaaaaatcaaaatgttgttaaaactaatgc 8018768  T
Q  322 aaa 324  Q
    |||    
T  8018767 aaa 8018765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 221 - 328
Target Start/End: Complemental strand, 4990039 - 4989936
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||| |||||||   ||||||||||||||    
T  4990039 gcattggataaggggataaaaatagaaatatagcattggaaaatagtgaaaaatgataaa-tttaactttttaaatgtcaaaa---tgttgaaaccaatg 4989944  T
Q  321 caaacatg 328  Q
    ||||||||    
T  4989943 caaacatg 4989936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 21016063 - 21016166
Alignment:
Q  224 ttggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaa 323  Q
    |||||||||||||||||||||||||||||  |||| |||||||| |||| ||||| |||| | ||||||||||||||||||||||||||| |||||||||    
T  21016063 ttggataaggggataaaaatagaaatataacattgaaaaatggttaaaagtgatagatttaa-ctttttaaaagtcaaaatgttgttgaagccaatgcaa 21016161  T
Q  324 acatg 328  Q
    |||||    
T  21016162 acatg 21016166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 26195383 - 26195482
Alignment:
Q  228 ataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||||||||||||||||||||||||  |||||||||| ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||| |||||||    
T  26195383 ataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaa-tttaactttttaaaagttaaaatgttgttgaaaccaatacaaacat 26195481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 26672894 - 26672799
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| | ||||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  26672894 attggataaagggataaaaatagaaatatagcattggaaaatgataaaaaaggataaatttaat-tttttaaaagtcaaaatgttgttgaaaccaat 26672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 10694911 - 10694811
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||| |||| ||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  10694911 attggataaggggattaaaataaaaatatagtatttaaaaatggtaaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaatcaatgca 10694813  T
Q  323 aa 324  Q
    ||    
T  10694812 aa 10694811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 3174568 - 3174456
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtca----aaatgttgttgaaa 314  Q
    |||| |||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||||| | ||||||||||||||    ||||||||||||||    
T  3174568 gggcgttggatgaggggataaaaatagaaatattatattggaaaatggtgaaaaattataaatttga-ctttttaaaagtcaaaataaatgttgttgaaa 3174470  T
Q  315 ccaatgcaaacatg 328  Q
    ||||| ||||||||    
T  3174469 ccaatacaaacatg 3174456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 34713924 - 34714030
Alignment:
Q  223 attggataaggggataaaaatagaaatata--gtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatg 320  Q
    |||| ||||||||||||||||||| |||||  |||||| ||||||||| ||| |||||||||| | ||| ||||||||||||||||||||||||||||||    
T  34713924 attgaataaggggataaaaatagatatatatagtattgaaaaatggtgcaaagtgataaatttca-cttcttaaaagtcaaaatgttgttgaaaccaatg 34714022  T
Q  321 caaacatg 328  Q
    ||||||||    
T  34714023 caaacatg 34714030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 14855394 - 14855493
Alignment:
Q  228 ataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||  |||||| |||| | |||||||||| ||||||||||| |||| |||||||||||    
T  14855394 ataaggggataaaaatagaaatatagtattaaaaaatagtgaaaagagataaa-tttaacattttaaaagttaaaatgttgttaaaactaatgcaaacat 14855492  T

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Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 37433369 - 37433267
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgca 322  Q
    ||||||||||||||||||||| || |||||  |||| |||||| |||||| ||||||| |||| |||||| ||||| |||||||||||||||||||||||    
T  37433369 attggataaggggataaaaatcgacatataacattgaaaaatgatgaaaagtgataaa-tttaacttttt-aaagttaaaatgttgttgaaaccaatgca 37433272  T
Q  323 aacat 327  Q
    |||||    
T  37433271 aacat 37433267  T

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Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 5129459 - 5129545
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttg 308  Q
    ||||| ||||||||||||||||| ||||||||| |||| |||||| |||||| |||||||||| || |||||||||||||||||||||    
T  5129459 gcatttgataaggggataaaaattgaaatatagcattgaaaaatgatgaaaagtgataaatttaat-tttttaaaagtcaaaatgttg 5129545  T

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Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 7532893 - 7532829
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  7532893 gggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaattt 7532829  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 31596438 - 31596512
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgtt 310  Q
    ||||||||||||||||| || ||  |||||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  31596438 gataaaaatagaaatattgtgttaaaaaatggtgaaaaatgatgaatttta-ctttttaaaagtcaaaatattgtt 31596512  T

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Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 26892884 - 26892799
Alignment:
Q  229 taaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||| ||||||||||||||||||| ||||| ||||| || |||||||||||| |||| |||||||||||| ||||| || |||||||    
T  26892884 taagaggataaaaatagaaatataatattgaaaaattgtaaaaaatgataaa-tttaactttttaaaagttaaaatattattgaaac 26892799  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 44874431 - 44874369
Alignment:
Q  221 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    |||||||||||||||||||||||| |||||||  |||| ||||||||||||| ||||||||||    
T  44874431 gcattggataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaattt 44874369  T

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Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 35930248 - 35930168
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaa 296  Q
    ||||| ||||||||||||  |||||||||| ||||||||||||| |||||| |||||||| ||||| |||| ||||||||||    
T  35930248 cttggagcattggataagaagataaaaataaaaatatagtattgaaaaatgatgaaaaataataaa-tttaactttttaaaa 35930168  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 6433635 - 6433548
Alignment:
Q  236 ataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaa 324  Q
    ||||||||| |||||||| |||| |||||||| |||| | |||||||| | |||||||||||| ||||| ||||| |||||||||||||    
T  6433635 ataaaaataaaaatatagcattgaaaaatggtaaaaagttataaatttaa-ctttttaaaagttaaaatattgttaaaaccaatgcaaa 6433548  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 33741523 - 33741586
Alignment:
Q  267 tgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgtta 331  Q
    ||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||||||    
T  33741523 tgaaaaatgataaatttaa-ctttttaaaagttaaaatattgttgaaaccaatgcaaatatgtta 33741586  T

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Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 25636694 - 25636780
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgtt 310  Q
    ||||||||||| |||||||||||||||||| |||||  ||||| |  ||||||||| |||||||| ||||| ||||||||||| |||||    
T  25636694 cattggataagaggataaaaatagaaatattgtatt-aaaaatagaaaaaaatgattaattttat-ttttttaaagtcaaaatattgtt 25636780  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 25690855 - 25690929
Alignment:
Q  239 aaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||||||  ||||  ||||| | |||||||||| |||||||| ||||||||||||||||| || |||||    
T  25690855 aaaatagaaatatcatattaaaaaatagagaaaaatgattaattttatttttttaaaagtcaaaatatttttgaa 25690929  T

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Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 11332796 - 11332888
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||| ||||  ||||||||||||||||| ||||||  |||||||| ||| ||| | | |||| |||||||||||||||||  ||||||||    
T  11332796 ggcattggttaagaagataaaaatagaaatattgtattgagaaatggtgtaaagtga-agaatttaactttttaaaagtcaaaacattgttgaa 11332888  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 19976488 - 19976545
Alignment:
Q  216 ttggggcattggataag-gggataaaaatagaaatatagtattggaaaatggtgaaaa 272  Q
    ||||||| ||||||||| ||||||||| |||||||||| ||||| |||||||||||||    
T  19976488 ttggggctttggataagtgggataaaagtagaaatataatattgaaaaatggtgaaaa 19976545  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 34421335 - 34421412
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    |||||||||||||| || ||||| | |||||||||||||||| ||| || | |||||||||| ||||||  ||||||||    
T  34421335 gataaaaatagaaacattgtatttggaaatggtgaaaaatga-aaaattcaactttttaaaaatcaaaacattgttgaa 34421412  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 30351637 - 30351592
Alignment:
Q  282 tttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    |||| |||||||||||| ||||| |||||||| |||||||||||||    
T  30351637 tttaactttttaaaagttaaaatattgttgaatccaatgcaaacat 30351592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 6841707 - 6841755
Alignment:
Q  229 taaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgat 277  Q
    |||| |||||||||||||||||| ||||| ||||||| |||||| ||||    
T  6841707 taagaggataaaaatagaaatattgtattagaaaatgatgaaaagtgat 6841755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 39972177 - 39972260
Alignment:
Q  243 tagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||| | ||||||| |||||||||||| |||| ||||| | |||||||||||| ||||  ||||| ||  ||||||||||||    
T  39972177 tagaaatgttgtattgggaaatggtgaaaagtgatgaatttga-ctttttaaaagttaaaaaattgttcaattcaatgcaaacat 39972260  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 319
Target Start/End: Complemental strand, 41689126 - 41689098
Alignment:
Q  291 ttaaaagtcaaaatgttgttgaaaccaat 319  Q
    |||||||||||||||||||||||||||||    
T  41689126 ttaaaagtcaaaatgttgttgaaaccaat 41689098  T

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Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 6867026 - 6866915
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| |||| | ||||||||||||||||||||||||||     
T  6867026 ttggggcattggataaggggataaaaataaaaatatagcatttgaaaatggtgaaaagtgataaa-tttaaccttttaaaagtcaaaatgttgttgaaat 6866928  T
Q  316 caatgcaaacatg 328  Q
    |||||||||||||    
T  6866927 caatgcaaacatg 6866915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 12191604 - 12191493
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    |||| |||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||||     
T  12191604 ttggcgcattggataagtggataaaaatagaaatatagcattggtaaatggtgaaaagtgataaatttaat-tttttaaaagtcaaaatgttgttgaaat 12191506  T
Q  316 caatgcaaacatg 328  Q
    |||| ||||||||    
T  12191505 caatacaaacatg 12191493  T

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Target: chr6; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 10855544 - 10855443
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  10855544 cttggggcatttgataaggggataaaaatagaaatataatattgaaaaatgatgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaa 10855446  T
Q  315 cca 317  Q
    |||    
T  10855445 cca 10855443  T

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Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 5578386 - 5578274
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||| |||||||||| ||||||||||||||||||||||| |||| |||||  ||| || ||||||| |||| |||||||||||||||||| |||||||||    
T  5578386 cttgaggcattggatgaggggataaaaatagaaatatagcattgaaaaataatgagaattgataaa-tttaactttttaaaagtcaaaatattgttgaaa 5578288  T
Q  315 ccaatgcaaacatg 328  Q
    | ||||||||||||    
T  5578287 caaatgcaaacatg 5578274  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 7875201 - 7875290
Alignment:
Q  238 aaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||| | |||||||||||||||||| ||||||||||||||||| |||||    
T  7875201 aaaaatagaaatatagcattggaaaatgatgaaaagtgataaatttaa-ctttttaaaagtcaaaatattgttgaaaccaatgcagacatg 7875290  T

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Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 29692338 - 29692427
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatg 305  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||| ||||||||||    
T  29692338 cttggggcattggataaatggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaa-tttaactttttaagagtcaaaatg 29692427  T

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Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 8324101 - 8324216
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    |||||||||||| |||||  |||||||||||||| |||| ||||  |||| ||||||||||||||| |||| |||||||||| | |||||||||||||||    
T  8324101 cttggggcattgaataagaagataaaaatagaaacatagcattgagaaattgtgaaaaatgataaa-tttaactttttaaaaattaaaatgttgttgaaa 8324199  T
Q  315 ccaatgcaaacatgtta 331  Q
    |||||  ||||||||||    
T  8324200 ccaatataaacatgtta 8324216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 26572079 - 26572186
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||| | |||| |||||||||| ||  |||||||||| ||||| ||||| |||    
T  26572079 cttggggcattggataaggggataaaaatagaaatata-----ggaaaatgataaaaagtgataaatttaat-attttaaaagttaaaatattgttaaaa 26572172  T
Q  315 ccaatgcaaacatg 328  Q
    ||||||||||||||    
T  26572173 ccaatgcaaacatg 26572186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 16437592 - 16437691
Alignment:
Q  220 ggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaat 319  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||         |||| |||||||||||| ||||| ||||||||||||||    
T  16437592 ggcattggataagtggataaaaatagaaatataacattggaaaatggtgaaaa---------tttaactttttaaaagtaaaaatattgttgaaaccaat 16437682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 216 - 331
Target Start/End: Original strand, 7274212 - 7274326
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||| ||||||| ||||| ||||| |||||||||||  |||||||||||  ||||| ||||||| |||| | |||||||||| |||||||||||||||     
T  7274212 ttgggacattggacaagggaataaatatagaaatataacattggaaaatgacgaaaagtgataaa-tttaacattttaaaagttaaaatgttgttgaaat 7274310  T
Q  316 caatgcaaacatgtta 331  Q
    |||| |||||||||||    
T  7274311 caatacaaacatgtta 7274326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 28014743 - 28014638
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||| |||| || ||||| ||||||||| ||||||| ||||||||||||||||| | ||| | |||||||||||| ||||| |||||||| ||||    
T  28014743 gggcattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttga-ctttttaaaagttaaaatattgttgaatccaa 28014645  T
Q  319 tgcaaac 325  Q
    |||||||    
T  28014644 tgcaaac 28014638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 7880447 - 7880536
Alignment:
Q  238 aaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||||||||||||| ||| ||||||| |||||| ||||||| |||| |||||||||||||||||| |||||||||| ||| || |||||    
T  7880447 aaaaatagaaatatagcattagaaaatgatgaaaagtgataaa-tttaactttttaaaagtcaaaatattgttgaaactaatacagacatg 7880536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 32786113 - 32786069
Alignment:
Q  284 tatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32786113 tatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 32786069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 27127524 - 27127601
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaa 313  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| || |||| ||||||||||||||| || ||||||||    
T  27127524 gataaaaatagaaatattgtattgagaaatggtgaaaaatgatgaa-tttaactttttaaaagtcaagatattgttgaa 27127601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 12175652 - 12175561
Alignment:
Q  234 ggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 327  Q
    ||||||||||| ||||||||||||| |||||| | |||| ||||||| |||| |||||||||||| |||| ||| || ||||||||||||||||    
T  12175652 ggataaaaatataaatatagtattgaaaaatgataaaaactgataaa-tttaactttttaaaagttaaaa-gttattaaaaccaatgcaaacat 12175561  T

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Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 32786327 - 32786260
Alignment:
Q  215 cttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    ||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||  |||||||||    
T  32786327 cttggggtattggataaggg-ataaaaatagaaatataacattggaaaatggtgaaaagagataaattt 32786260  T

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Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 327
Target Start/End: Original strand, 31220325 - 31220435
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaac 315  Q
    ||||||||||||||||| ||||  |||| ||||||| || ||| |||||||| |||| |||| || |||| |||||||||||| |||||||| |||||      
T  31220325 ttggggcattggataagaggatggaaatggaaatatcgttttgaaaaatggtaaaaagtgatgaa-tttaactttttaaaagttaaaatgttattgaata 31220423  T
Q  316 caatgcaaacat 327  Q
     |||||||||||    
T  31220424 aaatgcaaacat 31220435  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 12769294 - 12769254
Alignment:
Q  237 taaaaatagaaatatagtattggaaaatggtgaaaaatgat 277  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  12769294 taaaaatagaaatataatattgaaaaatggtgaaaaatgat 12769254  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 20775010 - 20775084
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgtt 310  Q
    ||||||||| ||||||| | |||| ||||| ||||||||| |||||||| ||||||||||| || ||||| |||||    
T  20775010 gataaaaattgaaatattgcattgaaaaattgtgaaaaataataaattt-atctttttaaaggttaaaatattgtt 20775084  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 22414598 - 22414676
Alignment:
Q  223 attggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaat 304  Q
    |||||||||| ||||||||| |  ||||| ||||| ||||||| ||||||| ||| | ||||| ||||||||||||||||||    
T  22414598 attggataagaggataaaaaaa--aatattgtattagaaaatgatgaaaaaagatga-ttttaactttttaaaagtcaaaat 22414676  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 12402842 - 12402909
Alignment:
Q  236 ataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaat 304  Q
    |||||||||||||||| |||||   |||||||||||||||||  ||||||  ||||||||||| |||||    
T  12402842 ataaaaatagaaatattgtattaagaaatggtgaaaaatgat-gattttagttttttaaaagttaaaat 12402909  T

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Target: scaffold0062 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 16773 - 16880
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| | | |||||||||||||||||| |||||||||||||    
T  16773 gggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaa-ctttttaaaagtcaaaatattgttgaaaccaa 16870  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  16871 tgcaaacatg 16880  T

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Target: scaffold0062; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 26941 - 27048
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| | | |||||||||||||||||| |||||||||||||    
T  26941 gggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaa-ctttttaaaagtcaaaatattgttgaaaccaa 27038  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  27039 tgcaaacatg 27048  T

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Target: scaffold0062; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 37107 - 37214
Alignment:
Q  219 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaa 318  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| | | |||||||||||||||||| |||||||||||||    
T  37107 gggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaa-ctttttaaaagtcaaaatattgttgaaaccaa 37204  T
Q  319 tgcaaacatg 328  Q
    ||||||||||    
T  37205 tgcaaacatg 37214  T

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Target: scaffold0002 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 392162 - 392241
Alignment:
Q  248 atatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||||| |||| |||||||| |||| |||||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  392162 atatagcattgaaaaatggtaaaaagtgataaatttaa-ctttttaaaagtcaaaatgttgttgaaaccgatgcaaacatg 392241  T

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Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 4268 - 4335
Alignment:
Q  216 ttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattt 283  Q
    ||||| |||||||||  |||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  4268 ttgggacattggatagagggataaaaataaaaatatagcattggaaaattgtgaaaagtgataaattt 4335  T

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Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 4709 - 4755
Alignment:
Q  282 tttatctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatg 328  Q
    |||| ||||||||||||||| ||||||||||||  ||||||||||||    
T  4709 tttaactttttaaaagtcaatatgttgttgaaattaatgcaaacatg 4755  T

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Target: scaffold0144 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 39679 - 39614
Alignment:
Q  235 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaattttatctttttaaaagtcaa 301  Q
    |||||||||||||| || |||||||||||| ||||||| ||| | | |||| |||||||||||||||    
T  39679 gataaaaatagaaacattgtattggaaaatagtgaaaactga-agaatttaactttttaaaagtcaa 39614  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 37393 - 37441
Alignment:
Q  222 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaa 270  Q
    ||||||||||| |||| ||||||||||||| |||||| |||||| ||||    
T  37393 cattggataagaggattaaaatagaaatattgtattgaaaaatgatgaa 37441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 37428 - 37483
Alignment:
Q  267 tgaaaaatgataaattttatctttttaaaagtcaaaatgttgttgaaaccaatgcaa 323  Q
    ||||||||||| ||||| | ||||| ||||||||||||||| ||||| |||||||||    
T  37428 tgaaaaatgatgaatttaa-cttttcaaaagtcaaaatgttattgaatccaatgcaa 37483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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