View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13075_low_7 (Length: 519)
Name: NF13075_low_7
Description: NF13075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13075_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 11 - 486
Target Start/End: Complemental strand, 32121358 - 32120883
Alignment:
| Q |
11 |
agcagagaataccgacatttctaataaagctcaaatatataccttcagagaacttgcgacggcaacaaaaaactttagggatgaaacctttattgggcaa |
110 |
Q |
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| T |
32121358 |
agcagagaataccgacatttctaataaagctcaaatatttaccttcagagaacttgcgacggcaacaaaaaactttagggatgaaacctttattgggcaa |
32121259 |
T |
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| Q |
111 |
ggtggatttggaactgtttacaaaggaaagctaggtagcactggtcaggtataattcaaaggatggtcgatttttacatgcttcttctttgaaatgctta |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
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| T |
32121258 |
ggtggatttggaactgtttacaaaggaaagctaggtagcactggtcaggtataattcaaaggatggacgatttttacatgcttcttctttgcaatgctta |
32121159 |
T |
|
| Q |
211 |
taaactgatccgcaacacgatttaactattttattaaactaaaagatttggaacatttgatcaggctgtagctgttaaaagacttgatacaactggtttc |
310 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32121158 |
taaactgatccgcaacacaatttaactattttattaaactaaaaggtttggaacatttgatcaggctgtagctgttaaaagacttgatacaactggtttc |
32121059 |
T |
|
| Q |
311 |
caaggtgagaaagaatttttagtggaggttctcatgctctctcttctacaccatcccaaccttgttagtatgattggttactgcgcggaaggtgatcaac |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32121058 |
caaggtgagaaagaatttttagtggaggttctcatgctctctcttctacaccatcccaaccttgttagtatgattggttactgcgcggaaggtgatcaac |
32120959 |
T |
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| Q |
411 |
gacttcttgtctatgaatacatgcctatgggatccttagaatctcatctccatggtaatgtaatgcaacatttagc |
486 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32120958 |
gacttcttgtctatgaatacatgcctatgggatccttagaatctcatctccatggtaatgtaatgcaacatttagc |
32120883 |
T |
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