View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13075_low_8 (Length: 516)
Name: NF13075_low_8
Description: NF13075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13075_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 18 - 508
Target Start/End: Original strand, 46061075 - 46061565
Alignment:
| Q |
18 |
attatttccttgttttacctcttgcgcccttccctacatgtatcttagtcttaatcacataatttttgcttacttttctattcgtctttcttctctcaat |
117 |
Q |
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| T |
46061075 |
attatttccttgttttacctcttgcgcccttccctacatgtatcttagtcttaatcacatcatttttgcttacttgtctattcgtctttcttctctcaat |
46061174 |
T |
|
| Q |
118 |
gatcacatctaaatttatggatagaagtgttagtaagagattactttttgtacatggaggattgtaattgtaggcggtcaataaaaatcgcaatcaaagt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
46061175 |
gatcacatctaaatttatggatagaagtgttagtaagatattactttttgtacatggaggattgtaattgtaggcggtcaataaaagtcgcaatcaaagt |
46061274 |
T |
|
| Q |
218 |
attggaggtaactacaataatcaccaaattaaactgctataatatgatttctcaactgaaagtctatcatatgctttaatttataaagtgatcgatacat |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
46061275 |
attggaggtaactacaataatcaccaaattaaactgctataatatgatttctcaactgaaagtctatcatatgctttaatttataaagtgatcaatacat |
46061374 |
T |
|
| Q |
318 |
gaacaaggnnnnnnncgtaggcaaaagactacatattttagagggcatggtcataagggtgataacacttgcacactcaggaattacacatatctcccta |
417 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46061375 |
gaacaaggaaaaaaacgtaggcaaaagactacatattttagagggcatggtcataagggtgataacacttgcacactcaggaattacacatatctcccta |
46061474 |
T |
|
| Q |
418 |
tagaacttaaaggctcaactattatatcatcataaatcaaacaaagatagataagatgttcttcttgagggtgaattcatctgcctttgct |
508 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46061475 |
tagaacttaaaggctcaactattatatcatcataaatcaaacaaagatagataagatgttcttcttgagggtgaattcatctgcctttgct |
46061565 |
T |
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