View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13076_high_33 (Length: 285)
Name: NF13076_high_33
Description: NF13076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13076_high_33 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 33 - 285
Target Start/End: Original strand, 14130474 - 14130726
Alignment:
| Q |
33 |
ctctaccatactttgattaagagaggaccactttgcactctgatattagacatgtttttaaaatatgaaaatggccttatatgttcttttcttcaccatt |
132 |
Q |
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| T |
14130474 |
ctctaccatactttgattaggagaggaccactttccactctgatattagacatgtttttaaaatatgaaaatggccttatatgttcttttcttcaccatt |
14130573 |
T |
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| Q |
133 |
gcaacgacaaaaaatgtagaagagcataagataaaagagcctgataaaacaaatctagaagaccaagaattctttattgactttcatacnnnnnnnntaa |
232 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
14130574 |
gcaacgacaataaatgtagaagagcataagataaaagagcctgataaaacaaatctagaagaccaagaattctttattgactttcatacaaaaaaaataa |
14130673 |
T |
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| Q |
233 |
aaggaggtgcaagtgcaattatagcaaagataaaaagagaaatatgaagaatg |
285 |
Q |
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| T |
14130674 |
aaggaggtgcaagtgcaattatagcaaagataaaaagagcaatatgaagaatg |
14130726 |
T |
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