View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13076_low_29 (Length: 310)
Name: NF13076_low_29
Description: NF13076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13076_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 13 - 298
Target Start/End: Original strand, 39306325 - 39306614
Alignment:
| Q |
13 |
tcatcatagtttctgcatcttcaaaaaactttttatagtatgatcgatcaacatccaagctaatggccagcagctccaaaataacatctgttaatttctt |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39306325 |
tcatcatagtttctgcatcttcaaaaaactttttatagtatgatcgatcaacatccaagctaatggccagcagctccaaaataacatctgttaatttctt |
39306424 |
T |
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| Q |
113 |
catggcctcgcaatacttttgtaacacccacctaatgcaattggaaagaaacaataggtcaaaatcaaaatatcaaacgttaaaatcaaaatttataatt |
212 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39306425 |
catggcctcgcaatacttttgtaacacccacctattgcaattggaaagaaacaataggtcaaaatcaaaatatcaaacgttaaaatcaaaatttataatt |
39306524 |
T |
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| Q |
213 |
cacttatttg----atacatgagtaaactaccttaataacttcaatgggtggagttcaaatctcgtaaaaataattgtaaagtagaaatt |
298 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39306525 |
cacttatttgatatatacatgagtaaactaccttaataacttcaatgggtggagttcaaatctcgtaaaaataattgtaaagtagaaatt |
39306614 |
T |
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