View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13079_high_2 (Length: 447)

Name: NF13079_high_2
Description: NF13079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13079_high_2
NF13079_high_2
[»] chr7 (1 HSPs)
chr7 (26-435)||(17158499-17158915)
[»] chr1 (2 HSPs)
chr1 (26-435)||(11780083-11780496)
chr1 (176-290)||(10424692-10424805)
[»] chr2 (3 HSPs)
chr2 (82-412)||(12101751-12102082)
chr2 (112-228)||(22171074-22171190)
chr2 (112-228)||(22172402-22172518)
[»] chr6 (3 HSPs)
chr6 (62-416)||(14977470-14977830)
chr6 (94-275)||(11776307-11776487)
chr6 (178-290)||(9352405-9352516)
[»] chr5 (2 HSPs)
chr5 (94-423)||(5781861-5782196)
chr5 (99-275)||(19069534-19069709)
[»] chr3 (5 HSPs)
chr3 (176-290)||(16311592-16311705)
chr3 (176-290)||(16313983-16314096)
chr3 (176-290)||(18488376-18488489)
chr3 (176-290)||(18492586-18492699)
chr3 (176-290)||(18494977-18495090)
[»] chr4 (1 HSPs)
chr4 (97-290)||(33041474-33041666)
[»] chr8 (1 HSPs)
chr8 (99-231)||(29820419-29820551)


Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 26 - 435
Target Start/End: Complemental strand, 17158915 - 17158499
Alignment:
Q  26 catggggccggctgttacttctacttcagcagttgttacttctcagttgacagtccctatgcctaggacgtcattgtcgtcaacacctttcagctttcca 125  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  17158915 catggggccggttgttacttctacttcagcagttgttacttctcagttgacagtccctatgcccaagacgtcattgtcgtcaacacctttcagctttcca 17158816  T
Q  126 ctacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17158815 ctacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttcctagtttgcgcacgatgaagtgcattctg 17158716  T
Q  226 agagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccctgtggttgacgatgttactgcaacactctcggatgatctggagcataatc 325  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  17158715 agagagtgggatcagtcgcatccgatatcgcgggaggagttggagaaccctgtggttgacgatgttactgcgacactctcggatgatgtggagcataatc 17158616  T
Q  326 attcgcaccc-------ttggtggagagtcccaaggggggccatgagcatgtactacattcatcaattgttgagcacaatgacgtgcatgaggtatctct 418  Q
    ||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17158615 attcgcacccctagtagttggtggagagtcccaagggggaccatgagcatgtactacattcatcaattgttaagcacaatgacgtgcatgaggtatctct 17158516  T
Q  419 agaattgccacaggttc 435  Q
     |||| |||||||||||    
T  17158515 ggaatcgccacaggttc 17158499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 26 - 435
Target Start/End: Complemental strand, 11780496 - 11780083
Alignment:
Q  26 catggggccggctgttacttctacttcagcagttgttacttctcagttgacagtccctatgcctaggacgtcattgtcgtcaacacctttcagctttcca 125  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||  |||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  11780496 catggggtcggttgttaattctacttcagcagttgttacttctcatatgacggtccctatgcccaggacatcattgtcgtcaacatctttcagctttcca 11780397  T
Q  126 ctacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctg 225  Q
    ||||||||||||||||||| | ||||||||||  |||||| ||| |||||||||||||||||||||||||||| | ||  ||| |||||| |||||||||    
T  11780396 ctacataacgtgtttgacagcgtttctagtgaggagctgctactagctacgccagtgtttgaaattgtttccccgatt--gcatgatgaaatgcattctg 11780299  T
Q  226 agagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccctgtggttgacgatgttactgcaacactctcggatgatctggagcataatc 325  Q
    ||||||| | | |||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||||||| |||| |||||||    
T  11780298 agagagt-gaagcagtcgcatccgacatcgcgggaggagttggagaaccatgtagttgacgatgttactccaacgctctcggatgatgtggaacataatc 11780200  T
Q  326 attcgcaccc-------ttggtggagagtcccaaggggggccatgagcatgtactacattcatcaattgttgagcacaatgacgtgcatgaggtatctct 418  Q
    |||||| |||        ||||||||||||| ||||| | |||||||||||||| |||||||||||||||||||||| |||| || ||||||||||||      
T  11780199 attcgcgcccacaggagctggtggagagtccgaagggtgcccatgagcatgtaccacattcatcaattgttgagcacgatgatgtacatgaggtatctaa 11780100  T
Q  419 agaattgccacaggttc 435  Q
     |||| |||||||||||    
T  11780099 ggaatcgccacaggttc 11780083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 10424805 - 10424692
Alignment:
Q  176 gccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    ||||||||| ||| |||||||||   ||||||||| ||| ||||||||||||||||| ||| || | |||||||| |||||||||||  |||||||||||    
T  10424805 gccagtgttagaatttgtttcccctgttgcgcacgttgacgtgcattctgagagagt-ggaacaattgcatctgacatcgcgggaggtattggagaaccc 10424707  T
Q  276 tgtggttgacgatgt 290  Q
     ||||| || |||||    
T  10424706 cgtggtggatgatgt 10424692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 82 - 412
Target Start/End: Original strand, 12101751 - 12102082
Alignment:
Q  82 ctatgcctaggacgtcattgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagt 181  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||| ||  |||| ||||  || || | |||    
T  12101751 ctatgcctatgacgtcattgtcgtcaacatctttcagctttccactacataacgtgtttaacaatatttctagcgaggagctaccacaagcaacacgagt 12101850  T
Q  182 gtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccctgtggt 281  Q
    |||||||||| ||||||   ||| ||||||||| |||||| |||||||||  ||| ||  | |||  || ||||||||||||||||||||||||  |||     
T  12101851 gtttgaaattatttccccaattgtgcacgatgacgtgcatcctgagagag-cggagcaaacacattcgacatcgcgggaggagttggagaaccccatggc 12101949  T
Q  282 tgacgatgttactgcaacactctcggatgatctggagcataatcattcgcaccc-------ttggtggagagtcccaaggggggccatgagcatgtacta 374  Q
    ||||||||||||| | | ||    |||  || |     |||||||||||| |||        ||||||||||||||||||| | | |||||||||||| |    
T  12101950 tgacgatgttactacgatacatgtggaacatat-----ataatcattcgcgcccccgggagctggtggagagtcccaagggtgcctatgagcatgtacca 12102044  T
Q  375 cattcatcaattgttgagcacaatgacgtgcatgaggt 412  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12102045 cattcatcaattgttgagcacgatgacgtgcatgaggt 12102082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 22171190 - 22171074
Alignment:
Q  112 ctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttcccagtttgcgcacga 211  Q
    |||||||||||||| |||| || |||||||| || ||||||  || | || ||||||   ||| ||||||||| ||| |||||||||   ||||||| |     
T  22171190 ctttcagctttccattacacaatgtgtttgataaaatttctcctggagagttgccacatactatgccagtgttagaagttgtttcccctattgcgcatgt 22171091  T
Q  212 tgaagtgcattctgaga 228  Q
    ||| |||||||||||||    
T  22171090 tgatgtgcattctgaga 22171074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 22172518 - 22172402
Alignment:
Q  112 ctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttcccagtttgcgcacga 211  Q
    |||||||||||||| |||| || |||||||| || ||||||  || | || ||||||   ||| ||||||||| ||| |||||||||   ||||||| |     
T  22172518 ctttcagctttccattacacaatgtgtttgataaaatttctcctggagagttgccacatactatgccagtgttagaagttgtttcccctattgcgcatgt 22172419  T
Q  212 tgaagtgcattctgaga 228  Q
    ||| |||||||||||||    
T  22172418 tgatgtgcattctgaga 22172402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 62 - 416
Target Start/End: Original strand, 14977470 - 14977830
Alignment:
Q  62 tacttctcagttgacagtccctatgcctaggacgtcattgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaag 161  Q
    |||||||||| |||  |||||| |||| |||||||| ||||| |||||| |||| ||||| ||| |||| ||| ||||||| |  ||||||||||| |||    
T  14977470 tacttctcagatgatggtccctgtgcccaggacgtctttgtcatcaacatcttttagcttcccattacacaacatgtttgatagtatttctagtgagaag 14977569  T
Q  162 ctgccactcgctacgccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggag 261  Q
     |||||   ||||| |||||| ||||  |||| ||||   ||||||||||||| |||||||| |||||||| ||| |||||||||| || ||||||||||    
T  14977570 ttgccagaagctacaccagtgattgagtttgtgtccccagttgcgcacgatgacgtgcattccgagagagt-ggagcagtcgcatccgacatcgcgggag 14977668  T
Q  262 gagttggagaaccctgtggttgacgatgttactgcaacactctcggatgatctggagcataatcattcgcaccc-------ttggtggagagtcccaagg 354  Q
    ||| || ||| |||   |||||||||||||||||| || || ||  ||||| |||| ||||||||||||  |||        ||||||||||||||||||    
T  14977669 gaggtgcagatcccaacggttgacgatgttactgctacgctatcttatgatgtggaacataatcattcgaccccgcgggagctggtggagagtcccaagg 14977768  T
Q  355 ggggccatgagcatgtactacattcatcaattgttgagcacaatgacgtgcatgaggtatct 416  Q
    |   |||||||||||| | ||||||||| |||||| ||||  ||||| ||||||| ||||||    
T  14977769 gttcccatgagcatgttccacattcatccattgtttagcatgatgacatgcatgatgtatct 14977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 94 - 275
Target Start/End: Complemental strand, 11776487 - 11776307
Alignment:
Q  94 cgtcattgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgt 193  Q
    |||| ||||||||||   |||||||||||||| ||||||| | ||||||||| ||||||  |||  || ||||||  | ||| |||||||| ||  ||||    
T  11776487 cgtctttgtcgtcaaactctttcagctttccattacataatgcgtttgacaaaatttctcatgaggagttgccacatgttacaccagtgttagaggttgt 11776388  T
Q  194 ttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    |||||   ||| ||||||||| ||||||||||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  11776387 ttcccctgttgtgcacgatgatgtgcattctgagagagt-ggagcagttgcatcagtcatcgcgggaggagttggagaaccc 11776307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 9352516 - 9352405
Alignment:
Q  178 cagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccctg 277  Q
    ||||||| ||| |||||||||   ||||||||  |||  |||||||||||||||||| | |||| || ||||| |||||| |||| ||||||||||||||    
T  9352516 cagtgttagaatttgtttcccctgttgcgcacattgacatgcattctgagagagtggaa-cagttgcgtctgacatcgcgagaggtgttggagaaccctg 9352418  T
Q  278 tggttgacgatgt 290  Q
    |||| || |||||    
T  9352417 tggtggatgatgt 9352405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 94 - 423
Target Start/End: Complemental strand, 5782196 - 5781861
Alignment:
Q  94 cgtcattgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgt 193  Q
    |||| ||||||||||   |||||||||||||| |||| || |||||  | |  ||||||  |||  ||||||||   |||||||||||||| ||  ||||    
T  5782196 cgtctttgtcgtcaaactctttcagctttccattacacaatgtgttcaatagaatttctcctgaggagctgccatgtgctacgccagtgttagaggttgt 5782097  T
Q  194 ttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccctgtggttgacgatgttac 293  Q
    |||||   ||||||||||||| ||||||||||||||||  ||| |||| ||||| || ||||||| |||||||||||||||    ||| || ||||||||    
T  5782096 ttcccttgttgcgcacgatgacgtgcattctgagagag-aggagcagttgcatcagacatcgcggaaggagttggagaaccacacggtggatgatgttac 5781998  T
Q  294 tgcaacactctcggatgatctggagcataatcattcgcaccc-------ttggtggagagtcccaaggggggccatgagcatgtactacattcatcaatt 386  Q
    ||  ||||| || |||||| |||| || |||||||||  |||        |||||||||||||||||||   |||||||| ||||  || ||||||  ||    
T  5781997 tgttacactttctgatgatgtggaacacaatcattcgatcccgcgggagctggtggagagtcccaagggttcccatgagcgtgtatcacgttcatccctt 5781898  T
Q  387 gttgagcacaatgacgtgcatgaggtatctctagaat 423  Q
     |||||||   ||| ||||||||||||||| ||||||    
T  5781897 attgagcattttgaggtgcatgaggtatctgtagaat 5781861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 99 - 275
Target Start/End: Complemental strand, 19069709 - 19069534
Alignment:
Q  99 ttgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttccc 198  Q
    ||||||||||   |||||||||||||| |||| || | ||||||||| ||||||  | |  |||||||||  |||||||||||||| ||  || ||||||    
T  19069709 ttgtcgtcaaactctttcagctttccattacacaatgcgtttgacaaaatttctcctaaggagctgccacgtgctacgccagtgttagaggttatttccc 19069610  T
Q  199 agtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
       ||||||||||||| ||||||||||||||||  ||| | || ||||| || |||||| |||||||||||||||||    
T  19069609 ctgttgcgcacgatgacgtgcattctgagagag-aggagcggttgcatcagacatcgcgagaggagttggagaaccc 19069534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 16311592 - 16311705
Alignment:
Q  176 gccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    ||||||||| ||| |||||||||   ||||||||  ||| ||||||| ||||| ||||| | || | |||||||| ||||||||||| ||||||||||||    
T  16311592 gccagtgttagaatttgtttcccctgttgcgcacattgatgtgcattttgagaaagtggaa-caattgcatctgacatcgcgggaggtgttggagaaccc 16311690  T
Q  276 tgtggttgacgatgt 290  Q
     ||||| || |||||    
T  16311691 cgtggtggatgatgt 16311705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 16313983 - 16314096
Alignment:
Q  176 gccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    ||||||||| ||| |||||||||   ||||||||| ||| ||||||| ||||| ||||| | || | |||||||| ||| ||||||| ||||||||||||    
T  16313983 gccagtgttagaatttgtttcccctattgcgcacgttgatgtgcattttgagaaagtggaa-caattgcatctgacatcacgggaggtgttggagaaccc 16314081  T
Q  276 tgtggttgacgatgt 290  Q
     ||||| || |||||    
T  16314082 cgtggtggatgatgt 16314096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 18488376 - 18488489
Alignment:
Q  176 gccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    ||||||||| ||| |||||||||   ||||||||  ||| ||||||| ||||| ||||| | || | |||||||| ||||||||||| ||||||||||||    
T  18488376 gccagtgttagaatttgtttcccctgttgcgcacattgatgtgcattttgagaaagtggaa-caattgcatctgacatcgcgggaggtgttggagaaccc 18488474  T
Q  276 tgtggttgacgatgt 290  Q
     ||||| || |||||    
T  18488475 cgtggtggatgatgt 18488489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 18492586 - 18492699
Alignment:
Q  176 gccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    ||||||||| ||| |||||||||   ||||||||  ||| ||||||| ||||| ||||| | || | |||||||| ||||||||||| ||||||||||||    
T  18492586 gccagtgttagaatttgtttcccctgttgcgcacattgatgtgcattttgagaaagtggaa-caattgcatctgacatcgcgggaggtgttggagaaccc 18492684  T
Q  276 tgtggttgacgatgt 290  Q
     ||||| || |||||    
T  18492685 cgtggtggatgatgt 18492699  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 18494977 - 18495090
Alignment:
Q  176 gccagtgtttgaaattgtttcccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccc 275  Q
    ||||||||| ||| |||||||||   ||||||||| ||| ||||||| ||||| ||||| | || | |||||||| ||| ||||||| ||||||||||||    
T  18494977 gccagtgttagaatttgtttcccctattgcgcacgttgatgtgcattttgagaaagtggaa-caattgcatctgacatcacgggaggtgttggagaaccc 18495075  T
Q  276 tgtggttgacgatgt 290  Q
     ||||| || |||||    
T  18495076 cgtggtggatgatgt 18495090  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 290
Target Start/End: Complemental strand, 33041666 - 33041474
Alignment:
Q  97 cattgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttc 196  Q
    ||||||||||||   |||||||||||||| |||| || |||||||| |  ||||||  |||  || ||||||   ||| |||||||||  || ||| |||    
T  33041666 cattgtcgtcaaactctttcagctttccattacacaatgtgtttgatagaatttctcctgaggagttgccacatactatgccagtgttataatttgcttc 33041567  T
Q  197 ccagtttgcgcacgatgaagtgcattctgagagagtgggatcagtcgcatctgatatcgcgggaggagttggagaaccctgtggttgacgatgt 290  Q
    |    ||| ||||| ||| ||| |||||||||||| || || ||| |||| ||| ||||||||||| |||||||||||||||||| || |||||    
T  33041566 ctctgttgtgcacgttgacgtgtattctgagagaggggaat-agttgcatatgacatcgcgggaggtgttggagaaccctgtggtggatgatgt 33041474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 29820419 - 29820551
Alignment:
Q  99 ttgtcgtcaacacctttcagctttccactacataacgtgtttgacaacatttctagtgaaaagctgccactcgctacgccagtgtttgaaattgtttccc 198  Q
    ||||||||||   |||||||||||||| |||| || |||||||| |  ||||||  |||  || ||||||   ||| ||||||||| ||| |||||||||    
T  29820419 ttgtcgtcaaactctttcagctttccattacacaatgtgtttgatagaatttctcctgaggagttgccacatactatgccagtgttagaatttgtttccc 29820518  T
Q  199 agtttgcgcacgatgaagtgcattctgagagag 231  Q
       ||||||||| |||  |||||||||||||||    
T  29820519 ttattgcgcacgttgacatgcattctgagagag 29820551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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