View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1307_high_3 (Length: 702)

Name: NF1307_high_3
Description: NF1307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1307_high_3
NF1307_high_3
[»] chr7 (29 HSPs)
chr7 (225-676)||(9568429-9568874)
chr7 (13-136)||(9569014-9569138)
chr7 (457-566)||(45640050-45640160)
chr7 (457-566)||(7401345-7401455)
chr7 (456-566)||(12772116-12772227)
chr7 (457-560)||(29625923-29626025)
chr7 (473-566)||(12640547-12640641)
chr7 (473-566)||(24781048-24781142)
chr7 (473-566)||(35645617-35645711)
chr7 (31-108)||(36066327-36066404)
chr7 (473-560)||(47999798-47999886)
chr7 (457-559)||(3766813-3766916)
chr7 (456-566)||(30388465-30388576)
chr7 (473-566)||(7691890-7691983)
chr7 (473-566)||(10244847-10244941)
chr7 (473-566)||(24508844-24508938)
chr7 (473-566)||(29617423-29617517)
chr7 (473-566)||(31026237-31026331)
chr7 (457-566)||(32619352-32619462)
chr7 (473-566)||(32676900-32676994)
chr7 (473-566)||(33996839-33996933)
chr7 (457-498)||(12364751-12364792)
chr7 (458-554)||(15106661-15106758)
chr7 (456-560)||(16961588-16961693)
chr7 (457-517)||(21066888-21066948)
chr7 (477-560)||(24732515-24732599)
chr7 (473-560)||(24880416-24880504)
chr7 (526-566)||(41699711-41699751)
chr7 (526-566)||(48674520-48674560)
[»] chr3 (32 HSPs)
chr3 (456-560)||(13644664-13644769)
chr3 (457-563)||(12894491-12894598)
chr3 (459-554)||(29496077-29496172)
chr3 (56-119)||(1604518-1604581)
chr3 (457-566)||(8964734-8964844)
chr3 (457-566)||(18194340-18194450)
chr3 (473-566)||(45701362-45701456)
chr3 (457-565)||(52974012-52974121)
chr3 (473-559)||(15975170-15975257)
chr3 (459-518)||(29559681-29559740)
chr3 (473-566)||(3894562-3894656)
chr3 (473-566)||(4139018-4139112)
chr3 (473-566)||(6919921-6920015)
chr3 (473-566)||(7269973-7270067)
chr3 (473-566)||(10176861-10176955)
chr3 (473-566)||(10482811-10482905)
chr3 (33-119)||(10505722-10505807)
chr3 (473-566)||(15299090-15299184)
chr3 (456-565)||(25279018-25279128)
chr3 (473-566)||(31327459-31327553)
chr3 (473-566)||(31327676-31327770)
chr3 (473-566)||(37800569-37800663)
chr3 (473-566)||(40933789-40933883)
chr3 (473-566)||(47098750-47098844)
chr3 (473-566)||(50234142-50234236)
chr3 (473-566)||(50496772-50496866)
chr3 (473-566)||(52410199-52410293)
chr3 (457-565)||(29373408-29373517)
chr3 (457-517)||(1743805-1743865)
chr3 (458-502)||(7251833-7251877)
chr3 (457-497)||(44364023-44364063)
chr3 (457-497)||(45871019-45871059)
[»] scaffold0028 (1 HSPs)
scaffold0028 (457-566)||(112110-112220)
[»] chr8 (25 HSPs)
chr8 (457-566)||(29733963-29734073)
chr8 (457-566)||(33838326-33838436)
chr8 (457-566)||(31450915-31451025)
chr8 (457-560)||(42880950-42881054)
chr8 (456-566)||(38344050-38344161)
chr8 (56-119)||(43820403-43820466)
chr8 (473-566)||(7816421-7816515)
chr8 (473-566)||(16432086-16432180)
chr8 (457-566)||(37717365-37717475)
chr8 (457-566)||(37090572-37090681)
chr8 (31-103)||(6144755-6144827)
chr8 (473-566)||(1937328-1937422)
chr8 (473-566)||(2787039-2787133)
chr8 (457-566)||(8034370-8034480)
chr8 (473-566)||(10736832-10736926)
chr8 (457-566)||(13406602-13406712)
chr8 (473-566)||(17698540-17698634)
chr8 (457-566)||(43283924-43284034)
chr8 (473-566)||(43656054-43656148)
chr8 (473-566)||(17027839-17027932)
chr8 (473-566)||(17558275-17558368)
chr8 (451-554)||(10200651-10200755)
chr8 (457-517)||(23339904-23339964)
chr8 (473-560)||(34158621-34158709)
chr8 (457-497)||(37092093-37092133)
[»] chr4 (21 HSPs)
chr4 (473-566)||(48615430-48615524)
chr4 (457-560)||(15208524-15208628)
chr4 (457-566)||(42231514-42231624)
chr4 (473-560)||(45112075-45112163)
chr4 (456-566)||(15064160-15064271)
chr4 (456-566)||(33530794-33530905)
chr4 (231-285)||(42476961-42477016)
chr4 (473-566)||(6371132-6371226)
chr4 (473-566)||(12581986-12582080)
chr4 (473-566)||(26919426-26919520)
chr4 (457-491)||(35976941-35976975)
chr4 (457-566)||(37251115-37251225)
chr4 (473-566)||(43147342-43147436)
chr4 (473-566)||(43596913-43597007)
chr4 (473-566)||(46774988-46775082)
chr4 (31-104)||(26841764-26841837)
chr4 (231-263)||(6025414-6025446)
chr4 (457-497)||(16193199-16193239)
chr4 (526-566)||(17709418-17709458)
chr4 (457-497)||(34862842-34862882)
chr4 (473-560)||(55251315-55251403)
[»] chr1 (27 HSPs)
chr1 (455-566)||(52369597-52369709)
chr1 (457-566)||(15775741-15775851)
chr1 (457-566)||(8984464-8984573)
chr1 (231-285)||(11016243-11016298)
chr1 (56-119)||(11016467-11016530)
chr1 (231-285)||(36683470-36683525)
chr1 (473-566)||(1151777-1151871)
chr1 (457-566)||(13773170-13773280)
chr1 (457-566)||(43884796-43884906)
chr1 (473-566)||(46965758-46965852)
chr1 (471-567)||(51933522-51933619)
chr1 (448-566)||(1570150-1570269)
chr1 (473-566)||(2277772-2277866)
chr1 (473-566)||(4482556-4482650)
chr1 (473-566)||(6438022-6438116)
chr1 (473-566)||(15819559-15819653)
chr1 (473-566)||(16343046-16343140)
chr1 (457-566)||(19011357-19011467)
chr1 (473-566)||(26584704-26584798)
chr1 (473-566)||(29188654-29188748)
chr1 (477-554)||(31818616-31818694)
chr1 (464-553)||(49424949-49425039)
chr1 (456-497)||(27178736-27178777)
chr1 (457-498)||(42127644-42127685)
chr1 (473-560)||(6129997-6130085)
chr1 (471-566)||(6213437-6213533)
chr1 (473-560)||(6702594-6702682)
[»] scaffold0038 (1 HSPs)
scaffold0038 (464-559)||(23370-23465)
[»] chr6 (15 HSPs)
chr6 (464-559)||(28222872-28222967)
chr6 (458-566)||(15285546-15285657)
chr6 (451-517)||(9888533-9888599)
chr6 (457-566)||(31802055-31802165)
chr6 (473-566)||(9704435-9704528)
chr6 (457-560)||(32049929-32050033)
chr6 (448-566)||(10934592-10934711)
chr6 (457-500)||(19618753-19618796)
chr6 (473-566)||(9246340-9246434)
chr6 (457-566)||(12284123-12284233)
chr6 (473-566)||(17441797-17441891)
chr6 (473-566)||(19953786-19953880)
chr6 (473-566)||(32611512-32611606)
chr6 (473-566)||(33573835-33573929)
chr6 (231-275)||(21060155-21060200)
[»] chr2 (9 HSPs)
chr2 (465-560)||(36005452-36005548)
chr2 (457-566)||(4562710-4562820)
chr2 (457-566)||(18278375-18278485)
chr2 (457-566)||(39408648-39408758)
chr2 (473-560)||(19684091-19684178)
chr2 (473-566)||(2643715-2643809)
chr2 (473-566)||(41509534-41509628)
chr2 (457-501)||(5062299-5062343)
chr2 (457-497)||(33041891-33041931)
[»] chr5 (22 HSPs)
chr5 (457-566)||(14641067-14641177)
chr5 (457-566)||(42525402-42525512)
chr5 (457-517)||(26912835-26912895)
chr5 (473-566)||(4745834-4745928)
chr5 (473-566)||(8968767-8968861)
chr5 (473-566)||(9835051-9835145)
chr5 (473-566)||(12463774-12463868)
chr5 (473-566)||(16386699-16386793)
chr5 (451-497)||(17064886-17064932)
chr5 (473-566)||(21918070-21918164)
chr5 (473-566)||(25400325-25400419)
chr5 (457-566)||(31074085-31074195)
chr5 (473-566)||(39886170-39886264)
chr5 (477-566)||(41156350-41156440)
chr5 (473-566)||(43580896-43580990)
chr5 (456-497)||(8752576-8752617)
chr5 (459-559)||(17175016-17175117)
chr5 (459-563)||(43328273-43328378)
chr5 (473-560)||(4417649-4417737)
chr5 (473-566)||(25648042-25648137)
chr5 (458-498)||(28581188-28581228)
chr5 (473-560)||(32505706-32505794)
[»] scaffold0608 (1 HSPs)
scaffold0608 (473-566)||(8984-9078)
[»] scaffold0460 (1 HSPs)
scaffold0460 (473-566)||(12477-12571)
[»] scaffold0121 (1 HSPs)
scaffold0121 (473-566)||(12012-12106)
[»] scaffold0024 (1 HSPs)
scaffold0024 (473-566)||(59801-59895)
[»] scaffold0187 (2 HSPs)
scaffold0187 (473-560)||(11084-11172)
scaffold0187 (473-560)||(21412-21500)


Alignment Details
Target: chr7 (Bit Score: 344; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 225 - 676
Target Start/End: Complemental strand, 9568874 - 9568429
Alignment:
Q  225 ttagacaaatgaaatatcaatcatttgataagatccagagtatatttgttcataaagtaaattaagttttggtagattttatttttggacttgctacatg 324  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9568874 ttagacaaatgaaatatcaatcatttgataagatccagaatatatttgttcataaagtaaattaagttttggtaaattttatttttggacttgctacatg 9568775  T
Q  325 tggtgattttgtggccactagtggaggagaaaaccttcaacaccaagatacggttgctgtggtaataattggctaaatcattgaatgagaatgaagatgt 424  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  9568774 tggtaattttgtggccactagtggaggagaaaaccttcaacaccaagatacggttgctgtggtaataattggctaaatcattgaatgagaatgaag---- 9568679  T
Q  425 agaagggattagaagttgtcatgtgatatcatcgtgagtttaactgaattggtagggatattgtatat--tatatatagaagccggggtttgaactc-ag 521  Q
         ||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||  |||||||||||| | |||||||||| | ||    
T  9568678 -----ggattagaagttgtcatgtgatatcctcgtgagtttaactgagttgatagggatattgtatatattatatatagaagtcagggtttgaaccctag 9568584  T
Q  522 atattccacttctatataattaaattgtgtgagatctagtcactacgtagttgccatgtgattcaacttattccactcatttgacgctgaaccacttgca 621  Q
    |||||||| ||||  ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  9568583 atattccatttctccataattaaattgtgtaagatctagtcactacgtagtttccatgtcattcaacttattccactcatttgacgctgaaccacttgca 9568484  T
Q  622 tctttctaaaccattgagcagttattctagcttaatttatataaggacatattga 676  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9568483 tctttctaaaccattgagcagttattctagcttaatttatataaggacatattga 9568429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 13 - 136
Target Start/End: Complemental strand, 9569138 - 9569014
Alignment:
Q  13 aatatctgaatatttttcgg-tgggctaccaaaataaataatattatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatcgaa 111  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9569138 aatatctaaatatttttcgggtgggccaccaaaataaataatattatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatcaaa 9569039  T
Q  112 aaattaaatagcataattggaagaa 136  Q
    |||||||||||||||||||||||||    
T  9569038 aaattaaatagcataattggaagaa 9569014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 45640160 - 45640050
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | || ||||||||||||||||||||||  || | | |||||| |||||| | | | ||||||||| |||||||||||||||||||     
T  45640160 cgtgagcttaacttagttagtagggatattgtatattatatgcaggaactggggttcgaactccggacactccacttctctataattaaattgtgtgagc 45640061  T
Q  556 tctagtcacta 566  Q
    |||||||||||    
T  45640060 tctagtcacta 45640050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 7401455 - 7401345
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    ||||||||||||| | |||||||||||||||||||||||||  || |   |||||||||| ||| || | |||||||||  | ||||||||||||||||     
T  7401455 cgtgagtttaactcagttggtagggatattgtatattatatgcaggaattggggtttgaacctcggacactccacttctccacaattaaattgtgtgagc 7401356  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  7401355 tctagccacta 7401345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 566
Target Start/End: Original strand, 12772116 - 12772227
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgag 554  Q
    ||||||| ||| || | ||||||||||||||| |||||||||  || || ||||||| |||| | | ||| |||||||||  ||||||||||||||||||    
T  12772116 tcgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggatactccacttctccataattaaattgtgtgag 12772215  T
Q  555 atctagtcacta 566  Q
     ||||| |||||    
T  12772216 ctctagccacta 12772227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 29625923 - 29626025
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagat 556  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || ||||||| || |||| | || | ||||||||| ||||||| ||||||||||| |    
T  29625923 cgtgagcttaactcagttggtagggatattgcatattatatgcag-agccgggattcgaaccccgacactccacttctctataatttaattgtgtgagtt 29626021  T
Q  557 ctag 560  Q
    ||||    
T  29626022 ctag 29626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 12640641 - 12640547
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | |||| | |||||||||  | |||||||||||||||| ||||| |||||    
T  12640641 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccacta 12640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 24781048 - 24781142
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | |||| |||||||||  | |||||||||||||||| ||||| |||||    
T  24781048 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccacta 24781142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 35645617 - 35645711
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    |||||||||||||||||||||||||  || |||||||||| |||| |  || | |||||||||  | |||||||||||||||| ||||| |||||    
T  35645617 ttggtagggatattgtatattatatgcaggagccggggttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccacta 35645711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 36066327 - 36066404
Alignment:
Q  31 ggtgggctaccaaaataaataatattatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatc 108  Q
    ||||||| |||||||||||  ||  ||||||||||||||||| |||||||||  | |||||| |||||||||| ||||    
T  36066327 ggtgggccaccaaaataaactatgatatataaaacaaaatttgtgttgtagtgtgcattaaacataaagttgaaaatc 36066404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 560
Target Start/End: Original strand, 47999798 - 47999886
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| ||||||||| ||| ||| |||||| ||| | | || | |||||||||  |||||||||||||||||| |||||    
T  47999798 ttggtagggatattgcatattatatgtaggagctggggttcgaatcccggacactccacttctccataattaaattgtgtgagctctag 47999886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 3766813 - 3766916
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  3766813 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 3766912  T
Q  556 tcta 559  Q
    ||||    
T  3766913 tcta 3766916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 566
Target Start/End: Complemental strand, 30388576 - 30388465
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||| ||| || | ||||||||||||||| |||||||||  ||  ||||||||| ||| | |||| | |||||||||  | ||||||||||||||||    
T  30388576 tcgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgag 30388477  T
Q  555 atctagtcacta 566  Q
     ||||| |||||    
T  30388476 ctctagccacta 30388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 7691890 - 7691983
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| ||||||| |||||  ||||| ||| |||||| | | |||||||||||  | |||| ||||||||||| |||||||||||    
T  7691890 ttggtagggatattgcatattatgtatagg-gccggagttcgaactccggacattccacttctccacaatttaattgtgtgagctctagtcacta 7691983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 10244941 - 10244847
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| ||||||||| ||| |||||||||| ||| | | || |  ||||||||  | |||||||||||||||| ||||| |||||    
T  10244941 ttggtagggatattgcatattatatgtaggagccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 10244847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 24508844 - 24508938
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||   | |||||||||| |||| | | | |||||||||||  | |||||||||||||||| ||||| |||||    
T  24508844 ttggtagggatattgcatattatatgatggagccggggttcgaaccccggacattccacttctccacaattaaattgtgtgagctctagccacta 24508938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 29617423 - 29617517
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  29617423 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 29617517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 31026237 - 31026331
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  31026237 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 31026331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 32619352 - 32619462
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||| || |||||||| ||||||||| ||| |||||||||| |||| | | | | |||||||||  | ||||||||||||||||     
T  32619352 cgtgagcttaactcagttgttaaggatattgcatattatatgtaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 32619451  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  32619452 tctagccacta 32619462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 32676994 - 32676900
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  32676994 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 32676900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 33996933 - 33996839
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || || ||||||| |||| | | | | |||||||||  |||||||||||||||||| ||||| |||||    
T  33996933 ttggtagggatattgcatattatatgcaggagtcggggttcgaaccctggacactccacttctccataattaaattgtgtgagctctagccacta 33996839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 12364751 - 12364792
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatata 498  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  12364751 cgtgagcttaactcacttggtagggatattgtatattatata 12364792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 554
Target Start/End: Complemental strand, 15106758 - 15106661
Alignment:
Q  458 gtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||| |||||| | ||||||||||||||| |||||||||  || || ||||||| ||| | |||| | |||||||||  | ||||||||||||||||    
T  15106758 gtgagcttaactcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccagacactccacttctccacaattaaattgtgtgag 15106661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 16961693 - 16961588
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||||||| || | |||||||||||||||||| ||||||  ||| | |||| |||||| | | || | |||||||||  |||||||||||||| |||    
T  16961693 tcgtgagtttagctcagttggtagggatattgtattttatatgcagaggtcgggatttgaaccacggacactccacttctccataattaaattgtgcgag 16961594  T
Q  555 atctag 560  Q
     |||||    
T  16961593 ttctag 16961588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 517
Target Start/End: Original strand, 21066888 - 21066948
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac 517  Q
    |||||||||| || | ||||||||||||||| ||||||||| |||  ||||||||| ||||    
T  21066888 cgtgagtttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaac 21066948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 560
Target Start/End: Complemental strand, 24732599 - 24732515
Alignment:
Q  477 tagggatattgtatattatatatagaagccggggtttgaactca-gatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||| ||||||||| ||||||  |||||| |||| || || | |||||||||  | |||||||||||||||| |||||    
T  24732599 tagggatattgcatattatatgtagaagttggggttcgaacgcatgacactccacttctccacaattaaattgtgtgagctctag 24732515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 24880504 - 24880416
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| |||| | | | | |||||||||  | |||||||||||||||| |||||    
T  24880504 ttggtagggatattgaatattatatgcaggagccggggttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctag 24880416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 41699711 - 41699751
Alignment:
Q  526 tccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||| ||||||||||||||||||| ||||| |||||    
T  41699711 tccacttctctataattaaattgtgtgagctctagccacta 41699751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 526 - 566
Target Start/End: Complemental strand, 48674560 - 48674520
Alignment:
Q  526 tccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    |||||||||  |||||||||||||||||| |||||||||||    
T  48674560 tccacttctccataattaaattgtgtgagctctagtcacta 48674520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 13644769 - 13644664
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgag 554  Q
    ||||||||||| || |||||||||||||||||||||||||||  ||  | ||||||| |||||||| | | |||||||||||||||||||||||||||||    
T  13644769 tcgtgagtttatctcaattggtagggatattgtatattatatgcaggggtcggggttcgaactcagtacactccacttctatataattaaattgtgtgag 13644670  T
Q  555 atctag 560  Q
     |||||    
T  13644669 ctctag 13644664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 563
Target Start/End: Complemental strand, 12894598 - 12894491
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| || |||||| |||| ||||||||| |||| || |||| | |||||||  | ||||||||||||||||     
T  12894598 cgtgagcttaactcagttggtagggatattgcattttatatgtagaggccggggttcgaacttcggatacttcacttctccacaattaaattgtgtgagc 12894499  T
Q  556 tctagtca 563  Q
    ||||||||    
T  12894498 tctagtca 12894491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 554
Target Start/End: Complemental strand, 29496172 - 29496077
Alignment:
Q  459 tgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||||||| | ||||||||||||||| |||||||||| ||||| || |||| || | |||| | |||||||||  ||||||||||||| ||||    
T  29496172 tgagtttaactcagttggtagggatattgcatattatatacagaagtcgaggttcgatcccagacactccacttcttcataattaaattgtatgag 29496077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 1604581 - 1604518
Alignment:
Q  56 tatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatcgaaaaattaaa 119  Q
    |||||||||||||||| ||||||||||  | |||||| |||||||||| |||| ||||||||||    
T  1604581 tatataaaacaaaattcatgttgtagtgtgcattaaacataaagttgaaaatcaaaaaattaaa 1604518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 8964844 - 8964734
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||| ||||  || |||||||||| |||||| | | | |||||||||  | ||||||||||||||||     
T  8964844 cgtgagtttagctcagttggtagggatattgcatatcatatgcaggagccggggttcgaactccgaacactccacttctccacaattaaattgtgtgagc 8964745  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  8964744 tctagccacta 8964734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 18194340 - 18194450
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  18194340 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 18194439  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  18194440 tctagccacta 18194450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 45701362 - 45701456
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | |||| |||||||||  | |||||||||||||||| ||||| |||||    
T  45701362 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccacta 45701456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 565
Target Start/End: Complemental strand, 52974121 - 52974012
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  52974121 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 52974022  T
Q  556 tctagtcact 565  Q
    ||||| ||||    
T  52974021 tctagccact 52974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 559
Target Start/End: Original strand, 15975170 - 15975257
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatcta 559  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| ||| || | |||||||||  | |||||||||||||||| ||||    
T  15975170 ttggtagggatattgcatattatatgcaggagccggggttcgaacctcggacactccacttcttcacaattaaattgtgtgagctcta 15975257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 518
Target Start/End: Complemental strand, 29559740 - 29559681
Alignment:
Q  459 tgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaact 518  Q
    |||| |||||| | ||||||||||||||| ||||||||| |||| | |||||||||||||    
T  29559740 tgagcttaactcagttggtagggatattgcatattatatgtagaggtcggggtttgaact 29559681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 3894562 - 3894656
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    |||||| |||||||| |||||||||  || |||||||||| |||||| | | | |||||||||  | |||||||||||||||| ||||| |||||    
T  3894562 ttggtatggatattgcatattatatgcaggagccggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccacta 3894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 4139018 - 4139112
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  4139018 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 4139112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 6920015 - 6919921
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| |||| | | | | |||||||||  | |||||||||||||||| ||||| |||||    
T  6920015 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccacta 6919921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 7269973 - 7270067
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||| |||||| ||||| | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  7269973 ttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccacta 7270067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 10176955 - 10176861
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  10176955 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 10176861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 10482905 - 10482811
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||| |||||| ||||| | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  10482905 ttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccacta 10482811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 10505722 - 10505807
Alignment:
Q  33 tgggctaccaaaataaataatattatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatcgaaaaattaaa 119  Q
    |||||||||||||| ||  ||| |||| ||||||||||||||||| ||||  | |||||| |||||||||| |||  ||||||||||    
T  10505722 tgggctaccaaaatgaactataatataaaaaacaaaatttatgtt-tagtgtgcattaaacataaagttgaaaattaaaaaattaaa 10505807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 15299090 - 15299184
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    |||||||||||||||||||||||||  || || ||| ||| |||| || || | ||||||||| || |||| ||||||||||| ||||| |||||    
T  15299090 ttggtagggatattgtatattatatgcagcagtcggagttcgaacttcggacactccacttctctacaatttaattgtgtgagctctagccacta 15299184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 565
Target Start/End: Complemental strand, 25279128 - 25279018
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||| ||| || | ||||||||||||||||||||||||| |||  |||||| |||||| | | || |  ||||||||  | ||||||||||||||||    
T  25279128 tcgtgagcttagcttagttggtagggatattgtatattatatgtaggggccgggatttgaaccccggacaccccacttctccacaattaaattgtgtgag 25279029  T
Q  555 atctagtcact 565  Q
     ||||| ||||    
T  25279028 ctctagccact 25279018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 31327553 - 31327459
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  31327553 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaaactccacttctccacaattaaattgtgtgagctctagccacta 31327459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 31327770 - 31327676
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  31327770 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 31327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 37800663 - 37800569
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  37800663 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 37800569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 40933883 - 40933789
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  40933883 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 40933789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 47098750 - 47098844
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  ||  ||||||||| ||| | |||| | |||||||||  | |||||||||||||||| ||||| |||||    
T  47098750 ttggtagggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccacta 47098844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 50234142 - 50234236
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  50234142 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 50234236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 50496866 - 50496772
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  50496866 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 50496772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 52410293 - 52410199
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||||||| || |||| | ||| | |||||||||  | |||||||||||||||| ||||| |||||    
T  52410293 ttggtagggatattgcatattatatgcaggagccgggattcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccacta 52410199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 565
Target Start/End: Complemental strand, 29373517 - 29373408
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | |||||| |||||||| |||||||||  ||  ||||||||| |||| ||||| |  ||||||||  | ||||||||||||||||     
T  29373517 cgtgagcttaactcagttggtaaggatattgcatattatatgcaggggccggggttcgaacctcagacaccccacttctccacaattaaattgtgtgagc 29373418  T
Q  556 tctagtcact 565  Q
    | ||||||||    
T  29373417 tatagtcact 29373408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 517
Target Start/End: Complemental strand, 1743865 - 1743805
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac 517  Q
    |||||| |||||| ||||||||||||||||| || |||||| |||  ||||||||| ||||    
T  1743865 cgtgagcttaactcaattggtagggatattgcattttatatgtaggggccggggttcgaac 1743805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 458 - 502
Target Start/End: Original strand, 7251833 - 7251877
Alignment:
Q  458 gtgagtttaactgaattggtagggatattgtatattatatataga 502  Q
    |||||||||||| || | |||||||||||| ||||||||||||||    
T  7251833 gtgagtttaacttaaatagtagggatattgcatattatatataga 7251877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 44364023 - 44364063
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    ||||||||||||| | ||||||||||||||| |||||||||    
T  44364023 cgtgagtttaactcagttggtagggatattgcatattatat 44364063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 45871019 - 45871059
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    |||||||||| || | |||||||||||||||||||||||||    
T  45871019 cgtgagtttagctcagttggtagggatattgtatattatat 45871059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 112110 - 112220
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || ||||| |||||||| ||| |||| |||||||||  | ||||||||||||||||     
T  112110 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccgaggtttgaatctcggatactccacttctccacaattaaattgtgtgagc 112209  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  112210 tctagccacta 112220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 29734073 - 29733963
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    ||||||||||||| | |||||| ||||||||||||||||||  || || ||||||| ||| | | |||| ||||||||| || ||||||||||||||||     
T  29734073 cgtgagtttaactcagttggtaaggatattgtatattatatgcaggagtcggggttcgaaccccggatactccacttctctacaattaaattgtgtgagc 29733974  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  29733973 tctagccacta 29733963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 33838326 - 33838436
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| | ||||||| |||||||||||||| ||||| |||| | |||| ||||  | ||||||||||||||||     
T  33838326 cgtgagtttagctcagttggtagggatattgcaaattatatgtagaagccggggttcgaactccagacactccatttctccacaattaaattgtgtgagc 33838425  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  33838426 tctagccacta 33838436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 31451025 - 31450915
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || |||||||||| ||||| | || | |||||||||  | ||||||||||||||||     
T  31451025 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaactccggacactccacttctccacaattaaattgtgtgagc 31450926  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  31450925 tctagccacta 31450915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 42880950 - 42881054
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| ||||||||| ||| |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  42880950 cgtgagcttaactcagttggtagggatattgcatattatatgtaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 42881049  T
Q  556 tctag 560  Q
    |||||    
T  42881050 tctag 42881054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 566
Target Start/End: Original strand, 38344050 - 38344161
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||| |||||| | ||||||||||||||| |||||||||  || ||| |||||| ||| | |||| | |||||||||  | ||||||||||||||||    
T  38344050 tcgtgagcttaactcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccagacactccacttctccacaattaaattgtgtgag 38344149  T
Q  555 atctagtcacta 566  Q
     ||||| |||||    
T  38344150 ctctagccacta 38344161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 43820466 - 43820403
Alignment:
Q  56 tatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatcgaaaaattaaa 119  Q
    |||||||||||||||||| ||||||||  | ||||||||||||||| | |||| ||||||||||    
T  43820466 tatataaaacaaaatttacgttgtagtgtgcattaaatataaagttaaaaatcaaaaaattaaa 43820403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 7816421 - 7816515
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| ||| || | |||||||||  | |||||||||||||||| ||||| |||||    
T  7816421 ttggtagggatattgaatattatatgcaggagccggggttcgaacctcggacactccacttctccacaattaaattgtgtgagctctagccacta 7816515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 16432180 - 16432086
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| |||| || || | |||||||||  |||||| ||||||||||| ||||| |||||    
T  16432180 ttggtagggatattgcatattatatgcaggagccggggttcgaacatcggacactccacttctccataatttaattgtgtgagctctagccacta 16432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 37717365 - 37717475
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  37717365 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 37717464  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  37717465 tctagccacta 37717475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 37090681 - 37090572
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagat 556  Q
    ||||||||||||| | |||||||||||||||||||||||||  || || ||||||| |||| |  | | ||||| |||  | ||||||||| |||||| |    
T  37090681 cgtgagtttaactcagttggtagggatattgtatattatatgcaggagtcggggttcgaaccccaacactccacatctccacaattaaattatgtgagct 37090582  T
Q  557 ctagtcacta 566  Q
    |||| |||||    
T  37090581 ctagccacta 37090572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 6144827 - 6144755
Alignment:
Q  31 ggtgggctaccaaaataaataatattatataaaacaaaatttatgttgtagttagtattaaatataaagttga 103  Q
    ||||||| |||||||| ||  ||  ||||||||| |||||||||||||||||  || ||||||||||||||||    
T  6144827 ggtgggccaccaaaatgaactatgatatataaaataaaatttatgttgtagtgtgtgttaaatataaagttga 6144755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 1937328 - 1937422
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || || ||||||| |||| | | | | ||||||||| || |||||||||||||||| ||||| |||||    
T  1937328 ttggtagggatattgcatattatatgcaggaggcggggttcgaaccccgcacactccacttctctacaattaaattgtgtgagctctagccacta 1937422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 2787133 - 2787039
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  2787133 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 2787039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 8034480 - 8034370
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  ||  ||||||||| ||||  |||| |  ||||||||  | ||||||||||||||||     
T  8034480 cgtgagcttaactcagttggtagggatattgcatattatatgcaggggccggggttcgaacaccagacaccccacttctccacaattaaattgtgtgagt 8034381  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  8034380 tctagccacta 8034370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 10736926 - 10736832
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  10736926 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 10736832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 13406602 - 13406712
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || |||||| ||| |||| |  || | |||||||||  | ||||||||||||||||     
T  13406602 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggagttcgaaccctggacactccacttctccacaattaaattgtgtgagc 13406701  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  13406702 tctagccacta 13406712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 17698540 - 17698634
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  17698540 ttggtagggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgagctctagccacta 17698634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 43284034 - 43283924
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||| ||||  | ||||||||||||||||     
T  43284034 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagc 43283935  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  43283934 tctagccacta 43283924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 43656054 - 43656148
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| ||||||||| |||  | ||||||| ||| ||| || |||||||||||  | |||| ||||||||||| ||||| |||||    
T  43656054 ttggtagggatattgcatattatatgtaggggtcggggttcgaacctcggacattccacttctccacaatttaattgtgtgagctctagccacta 43656148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 17027932 - 17027839
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||   | |||||||||| |||| | || |  ||||||||  | |||||||||||||||| ||||| |||||    
T  17027932 ttggtagggatattgcatattatatgccggagccggggttcgaacccggacaccccacttctccacaattaaattgtgtgagctctagccacta 17027839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 17558368 - 17558275
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||   | |||||||||| |||| | || |  ||||||||  | |||||||||||||||| ||||| |||||    
T  17558368 ttggtagggatattgcatattatatgccggagccggggttcgaacccggacaccccacttctccacaattaaattgtgtgagctctagccacta 17558275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 451 - 554
Target Start/End: Complemental strand, 10200755 - 10200651
Alignment:
Q  451 tatcatcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgt 549  Q
    |||| ||||||| ||| || | ||||||| ||||||| |||||||||  || |||||||||| |||| | | | | |||||||||  |||||||||||||    
T  10200755 tatcctcgtgagcttagctcagttggtagagatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgt 10200656  T
Q  550 gtgag 554  Q
    |||||    
T  10200655 gtgag 10200651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 517
Target Start/End: Complemental strand, 23339964 - 23339904
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac 517  Q
    |||||| |||||| | ||||||| ||||||||||||||||| |||  ||||||||| ||||    
T  23339964 cgtgagcttaactcagttggtagagatattgtatattatatgtaggggccggggttcgaac 23339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 34158709 - 34158621
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || || ||||||| |||| | | ||| |||||||||  | |||||||||||||||| |||||    
T  34158709 ttggtagggatattgcatattatatgcaggaggcggggttcgaaccccgcatactccacttctccacaattaaattgtgtgagctctag 34158621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 37092093 - 37092133
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    |||||||||| || | |||||||||||||||||||||||||    
T  37092093 cgtgagtttagctcagttggtagggatattgtatattatat 37092133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 48615524 - 48615430
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  ||||||||||||| ||| | | |||| |||||||||  | |||||||||||||||| |||||||||||    
T  48615524 ttggtagggatattgcatattatatgcagaagccggggttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagtcacta 48615430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 15208524 - 15208628
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | | ||||||||||||| ||||||||||||| | |||||||| ||| ||| || | |||||||||  | ||||||||||||||||     
T  15208524 cgtgagcttaactcagtgggtagggatattgcatattatatataggaaccggggttcgaacctcggacactccacttctccacaattaaattgtgtgagc 15208623  T
Q  556 tctag 560  Q
    |||||    
T  15208624 tctag 15208628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 42231514 - 42231624
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | |||||||| |||||| |||||||||  || |||||||||| |||| | | | | |||||||||  | ||||||||||||||||     
T  42231514 cgtgagcttaactcagttggtaggaatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 42231613  T
Q  556 tctagtcacta 566  Q
    |||||||||||    
T  42231614 tctagtcacta 42231624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 45112163 - 45112075
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  |||||||||||||||||| |||||    
T  45112163 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgagctctag 45112075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 566
Target Start/End: Complemental strand, 15064271 - 15064160
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||||||| || | |||||||| |||||| |||||||||  || || || |||| ||| | | |||| |||||||||  ||||||||||||||||||    
T  15064271 tcgtgagtttagctcagttggtaggaatattgcatattatatgcaggagtcgaggttcgaaccccggatactccacttctccataattaaattgtgtgag 15064172  T
Q  555 atctagtcacta 566  Q
     ||||| |||||    
T  15064171 ctctagccacta 15064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 566
Target Start/End: Original strand, 33530794 - 33530905
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgag 554  Q
    ||||||| ||| || ||||||||||||||||| ||||||||| |||    ||||||| ||| | | |||| |||||||||  |||||| |||||||||||    
T  33530794 tcgtgagcttagcttaattggtagggatattgcatattatatgtagggatcggggttcgaaccccggatactccacttctccataattgaattgtgtgag 33530893  T
Q  555 atctagtcacta 566  Q
     ||||| |||||    
T  33530894 ctctagccacta 33530905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 42476961 - 42477016
Alignment:
Q  231 aaatgaaatatcaatcatttgataagatccaga-gtatatttgttcataaagtaaa 285  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||| |||||||||    
T  42476961 aaatgaaatatcaatcatttgatgagatccaaatatatatttgttcttaaagtaaa 42477016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 6371132 - 6371226
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  6371132 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttcttcacaattaaattgtgtgagctctagccacta 6371226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 12582080 - 12581986
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  12582080 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 12581986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 26919520 - 26919426
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||| |||||| ||||| | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  26919520 ttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttcttcacaattaaattgtgtgagctctagccacta 26919426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 35976975 - 35976941
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtata 491  Q
    ||||||||||||| |||||||||||||||||||||    
T  35976975 cgtgagtttaactcaattggtagggatattgtata 35976941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 37251115 - 37251225
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| ||||| |||  || |||||||||| |||| || || | |||||||||  | |||||||||||||||      
T  37251115 cgtgagcttaactcagttggtagggatattgcatattttatgcaggagccggggttcgaacatcggacactccacttctccacaattaaattgtgtgaac 37251214  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  37251215 tctagccacta 37251225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 43147436 - 43147342
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  43147436 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 43147342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 43596913 - 43597007
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  43596913 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 43597007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 46775082 - 46774988
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  46775082 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 46774988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 26841764 - 26841837
Alignment:
Q  31 ggtgggctaccaaaataaataatattatataaaacaaaatttatgttgtagttagtattaaatataaagttgag 104  Q
    ||||||| |||||| ||||  ||  |||||| ||||||||| ||||||| |||| ||||||| |||||||||||    
T  26841764 ggtgggccaccaaagtaaactatgatatatagaacaaaattaatgttgttgttaatattaaacataaagttgag 26841837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 6025446 - 6025414
Alignment:
Q  231 aaatgaaatatcaatcatttgataagatccaga 263  Q
    ||||||||||||||||||||||| |||||||||    
T  6025446 aaatgaaatatcaatcatttgatgagatccaga 6025414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Complemental strand, 16193239 - 16193199
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    ||||||||||||| | |||||| ||||||||||||||||||    
T  16193239 cgtgagtttaactcagttggtaaggatattgtatattatat 16193199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 526 - 566
Target Start/End: Complemental strand, 17709458 - 17709418
Alignment:
Q  526 tccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||| || |||||||||||||||| |||||||||||    
T  17709458 tccacttctctacaattaaattgtgtgagctctagtcacta 17709418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 34862842 - 34862882
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  34862842 cgtgagcttaactcaattggtagggatattgtattttatat 34862882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 55251403 - 55251315
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| |||||    
T  55251403 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctag 55251315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 566
Target Start/End: Original strand, 52369597 - 52369709
Alignment:
Q  455 atcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtga 553  Q
    |||||||||||| || | ||||||||||||||| |||||||||  || ||||| |||| |||| |  |||| |||||||||  |||||||||||||||||    
T  52369597 atcgtgagtttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccctggatactccacttctccataattaaattgtgtga 52369696  T
Q  554 gatctagtcacta 566  Q
    | ||||| |||||    
T  52369697 gctctagccacta 52369709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 15775741 - 15775851
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| ||||||||||||||||| |||||||||  || |||||| ||| ||| | |||| | || ||||||| | ||||||||||||||||     
T  15775741 cgtgagcttaactcaattggtagggatattgcatattatatgcaggagccggagttcgaaccccagacactcaacttctacacaattaaattgtgtgagc 15775840  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  15775841 tctagccacta 15775851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 8984573 - 8984464
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagat 556  Q
    |||||| |||||| | |||| |||||||||| |||||||||  || |||||||||| |||| | || | |||||||||  | |||||||||||||||| |    
T  8984573 cgtgagcttaactcagttggcagggatattgcatattatatgcaggagccggggttcgaacccggacactccacttctccacaattaaattgtgtgagct 8984474  T
Q  557 ctagtcacta 566  Q
    |||| |||||    
T  8984473 ctagccacta 8984464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 11016298 - 11016243
Alignment:
Q  231 aaatgaaatatcaatcatttgataagatcc-agagtatatttgttcataaagtaaa 285  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  11016298 aaatgaaatatcaatcatttgatgagatccaaaagtatatttgttcttaaagtaaa 11016243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 11016530 - 11016467
Alignment:
Q  56 tatataaaacaaaatttatgttgtagttagtattaaatataaagttgagaatcgaaaaattaaa 119  Q
    ||||||||||||| |||||||||||||  | |||||| |||||||||| |||| ||||||||||    
T  11016530 tatataaaacaaattttatgttgtagtgtgcattaaacataaagttgaaaatcaaaaaattaaa 11016467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 36683470 - 36683525
Alignment:
Q  231 aaatgaaatatcaatcatttgataagatcc-agagtatatttgttcataaagtaaa 285  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  36683470 aaatgaaatatcaatcatttgatgagatccaaaagtatatttgttcttaaagtaaa 36683525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 1151777 - 1151871
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||| || ||||||| || ||| | | || | |||||||||  | |||||||||||||||| |||||||||||    
T  1151777 ttggtagggatattgcatattatatacaggagccgggattcgaaccccggacactccacttcttcacaattaaattgtgtgagctctagtcacta 1151871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 13773170 - 13773280
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  13773170 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgagc 13773269  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  13773270 tctagccacta 13773280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 43884796 - 43884906
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| |||| |  || | |||||||||  | ||||||||||||||||     
T  43884796 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccctggacactccacttctccacaattaaattgtgtgagt 43884895  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  43884896 tctagccacta 43884906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 46965758 - 46965852
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  |||||||||||||||||| ||||| |||||    
T  46965758 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgagctctagccacta 46965852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 567
Target Start/End: Original strand, 51933522 - 51933619
Alignment:
Q  471 aattggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgagatctagtcactac 567  Q
    ||||||||||||||||| |||||||||  || |  ||||||| ||||| |||| |||||| ||||  | |||||||||||||||| ||||| ||||||    
T  51933522 aattggtagggatattgcatattatatgcaggaatcggggttcgaactccagacattccatttctccacaattaaattgtgtgaggtctagccactac 51933619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 566
Target Start/End: Complemental strand, 1570269 - 1570150
Alignment:
Q  448 tgatatcatcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaat 546  Q
    |||||||  |||||| ||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||    
T  1570269 tgatatccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaat 1570170  T
Q  547 tgtgtgagatctagtcacta 566  Q
    |||||||| ||||| |||||    
T  1570169 tgtgtgagctctagccacta 1570150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 2277772 - 2277866
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  2277772 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggagactccacttctccacaattaaattgtgtgagctctagccacta 2277866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 4482650 - 4482556
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||| ||| |||| | | ||| |||||||||  | |||||||||||||||| ||||| |||||    
T  4482650 ttggtagggatattgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccacta 4482556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 6438116 - 6438022
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  6438116 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 6438022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 15819653 - 15819559
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  15819653 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 15819559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 16343046 - 16343140
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  16343046 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 16343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 19011357 - 19011467
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| ||| || ||||||||||||||||| |||||||||  ||  || |||||| ||| | |||||| |||||||||  | |||| |||||||||||     
T  19011357 cgtgagcttagctcaattggtagggatattgcatattatatgcaggggctggggttcgaaccccagatactccacttctccacaatttaattgtgtgagc 19011456  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  19011457 tctagccacta 19011467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 26584798 - 26584704
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || || ||||||| |||| | | | | ||||||||| || |||||||||||||||| ||||| |||||    
T  26584798 ttggtagggatattgcatattatatgcaggaggcggggttcgaaccccgcacactccacttctctacaattaaattgtgtgagctctagccacta 26584704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 29188654 - 29188748
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||| |||||| |||| | | ||| |||||||||  | |||||||||||||||| ||||| |||||    
T  29188654 ttggtagggatattgcatattatatgcaggagcaggggttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccacta 29188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 554
Target Start/End: Original strand, 31818616 - 31818694
Alignment:
Q  477 tagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtgag 554  Q
    |||| |||||| |||||||||  || |||||||||| |||| | ||||| ||||||||| ||||||| |||||||||||    
T  31818616 taggaatattgcatattatatgcaggagccggggttcgaaccccagatactccacttctctataatttaattgtgtgag 31818694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 553
Target Start/End: Complemental strand, 49425039 - 49424949
Alignment:
Q  464 ttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac-tcagatattccacttctatataattaaattgtgtga 553  Q
    |||||| ||||||||||||||||| |||||||||  |||| | || ||| |||| || || | |||||||||  |||||||||||||||||    
T  49425039 ttaactcaattggtagggatattgcatattatatgcagaaactggagttcgaacatcggacactccacttctccataattaaattgtgtga 49424949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 27178777 - 27178736
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    ||||||| |||||| |||||||| ||||||||||||||||||    
T  27178777 tcgtgagcttaactcaattggtaaggatattgtatattatat 27178736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 42127685 - 42127644
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatata 498  Q
    ||||||||||||| |||||||| |||||||| ||||||||||    
T  42127685 cgtgagtttaactcaattggtatggatattgcatattatata 42127644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 6130085 - 6129997
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || || ||||||| ||||| | || | |||||||||  | |||||||||||||||| |||||    
T  6130085 ttggtagggatattgcatattatatgcaggagtcggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctag 6129997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 6213437 - 6213533
Alignment:
Q  471 aattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||||| |||||||||| ||  | | ||||||||| | | ||||  ||||||||  | |||||||||||||||| ||||| |||||    
T  6213437 aattggtagggatattgcatattatatacaggggtcagggtttgaatcccggataccccacttcttcacaattaaattgtgtgagttctagccacta 6213533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Original strand, 6702594 - 6702682
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || || ||||||| ||| | |||| | |||||||||  | |||||||||||||||| |||||    
T  6702594 ttggtagggatattgcatattatatgcaggagtcggggttcgaaccccagacactccacttcttcacaattaaattgtgtgagctctag 6702682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 559
Target Start/End: Original strand, 23370 - 23465
Alignment:
Q  464 ttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagatcta 559  Q
    |||||| | ||||||||||||||| |||||||||  ||| ||||||||| |||| | || | |||||||||  |||||||||||||||||| ||||    
T  23370 ttaactcagttggtagggatattgcatattatatgcagaggccggggttcgaacccggacactccacttctccataattaaattgtgtgagctcta 23465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 559
Target Start/End: Original strand, 28222872 - 28222967
Alignment:
Q  464 ttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagatcta 559  Q
    |||||| | ||||||||||||||| |||||||||  ||| ||||||||| |||| | || | |||||||||  |||||||||||||||||| ||||    
T  28222872 ttaactcagttggtagggatattgcatattatatgcagaggccggggttcgaacccggacactccacttctccataattaaattgtgtgagctcta 28222967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 566
Target Start/End: Original strand, 15285546 - 15285657
Alignment:
Q  458 gtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccact--tctatataattaaattgtgtgag 554  Q
    |||||||||||| | ||||||||||||||  |||||||||  |  ||||||||||||||| | ||| | ||||||  ||||||||||| |||||||||||    
T  15285546 gtgagtttaactcagttggtagggatattacatattatatgcatgagccggggtttgaaccctagagactccacttctctatataattcaattgtgtgag 15285645  T
Q  555 atctagtcacta 566  Q
    | |||| |||||    
T  15285646 aactagccacta 15285657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 517
Target Start/End: Complemental strand, 9888599 - 9888533
Alignment:
Q  451 tatcatcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac 517  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||  || || ||||||||||||    
T  9888599 tatcctcgtgagtttaactcagttggtagggatattgtatattctatgcaggagtcggggtttgaac 9888533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 31802055 - 31802165
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  31802055 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 31802154  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  31802155 tctagccacta 31802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 9704435 - 9704528
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||||| |||| |||| | |||| ||| |||||  | |||||||||||||||| ||||| |||||    
T  9704435 ttggtagggatattgcatattatatgcaggagccgaggttcgaaccccgatactccgcttctccacaattaaattgtgtgagctctagccacta 9704528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 32050033 - 32049929
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| |  |||||||||||||| |||||||||  || |||||||||| |||||| | | | |||||||||  | ||||||||||||||||     
T  32050033 cgtgagcttaactcagctggtagggatattgcatattatatgcaggagccggggttcgaactccgaacactccacttctccacaattaaattgtgtgagc 32049934  T
Q  556 tctag 560  Q
    |||||    
T  32049933 tctag 32049929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 566
Target Start/End: Original strand, 10934592 - 10934711
Alignment:
Q  448 tgatatcatcgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaat 546  Q
    |||||||  |||||| ||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||    
T  10934592 tgatatccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaat 10934691  T
Q  547 tgtgtgagatctagtcacta 566  Q
    |||||||| ||||| |||||    
T  10934692 tgtgtgagttctagccacta 10934711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 500
Target Start/End: Complemental strand, 19618796 - 19618753
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatata 500  Q
    |||||||||| || ||||||||||||||||| ||||||||||||    
T  19618796 cgtgagtttagctcaattggtagggatattgcatattatatata 19618753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 9246434 - 9246340
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || || ||||||| |||| | | | | |||||||||  | |||||||||||||||||||||| |||||    
T  9246434 ttggtagggatattgcatattatatgcaggaggcggggttcgaaccccgcacactccacttctccacaattaaattgtgtgagatctagccacta 9246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 12284123 - 12284233
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  ||  | ||||||| ||||| | || | |||||||||  | ||||||||||||||||     
T  12284123 cgtgagcttaactcagttggtagggatattgaatattatatgcaggtgtcggggttcgaactccggaaactccacttctccacaattaaattgtgtgagc 12284222  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  12284223 tctagccacta 12284233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 17441891 - 17441797
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  17441891 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 17441797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 19953880 - 19953786
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  19953880 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 19953786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 32611606 - 32611512
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  32611606 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 32611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 33573835 - 33573929
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactc-agatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| |||| |  || | |||||||||  | |||||||||||||||| ||||| |||||    
T  33573835 ttggtagggatattgcatattatatgcaggagccggggttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccacta 33573929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 21060200 - 21060155
Alignment:
Q  231 aaatgaaatatcaatcatttgataagatcc-agagtatatttgttc 275  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||    
T  21060200 aaatgaaatatcaatcatttgatgagatccaaaagtatatttgttc 21060155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 560
Target Start/End: Original strand, 36005452 - 36005548
Alignment:
Q  465 taactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||| ||||||||||||||||| |||||||||  || |||||||||| ||| | |||| | |||||||||  | |||||||||||||||| |||||    
T  36005452 taactcaattggtagggatattgcatattatatgcaggagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctag 36005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 4562820 - 4562710
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  4562820 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 4562721  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  4562720 tctagccacta 4562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 18278485 - 18278375
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  18278485 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgagc 18278386  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  18278385 tctagccacta 18278375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 39408758 - 39408648
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||| |||||||||  |  |||||||||| ||| | |||| | |||||||||  | ||||||||||||||||     
T  39408758 cgtgagcttaactcagttggtagggatattgcatattatatgcaagagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagc 39408659  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  39408658 tctagccacta 39408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 560
Target Start/End: Original strand, 19684091 - 19684178
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || ||| |||||| |||| | || | |||||||||  | |||||||||||||||| |||||    
T  19684091 ttggtagggatattgcatattatatgcaggagctggggttcgaaccccgacactccacttctccacaattaaattgtgtgagctctag 19684178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 2643715 - 2643809
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  2643715 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 2643809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 41509534 - 41509628
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  41509534 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 41509628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 5062299 - 5062343
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatag 501  Q
    |||||| |||||| | ||||||||||||||| |||||||||||||    
T  5062299 cgtgagcttaactcagttggtagggatattgcatattatatatag 5062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Complemental strand, 33041931 - 33041891
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    ||||||||||||| | ||||||||||||||| |||||||||    
T  33041931 cgtgagtttaactcagttggtagggatattgcatattatat 33041891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 14641177 - 14641067
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| ||||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||| |||     
T  14641177 cgtgagcttaactcaattggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgcgagc 14641078  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  14641077 tctagccacta 14641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 42525402 - 42525512
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgaga 555  Q
    |||||||||| || | ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | ||||||||||||||||     
T  42525402 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 42525501  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  42525502 tctagccacta 42525512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 517
Target Start/End: Original strand, 26912835 - 26912895
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaac 517  Q
    |||||| |||||| ||||||||||||||||| ||||||||| |||  ||||||||| ||||    
T  26912835 cgtgagcttaactcaattggtagggatattgcatattatatgtaggggccggggttcgaac 26912895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 4745928 - 4745834
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  4745928 ttggtagggatattgcatattatatgaaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 4745834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 8968767 - 8968861
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  8968767 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 8968861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 9835051 - 9835145
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  9835051 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 9835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 12463774 - 12463868
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  12463774 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 12463868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 16386793 - 16386699
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||| |||||| |||| | | ||| |||||||||  | |||||||||||||||| ||||| |||||    
T  16386793 ttggtagggatattgcatattatatgcaggagctggggttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccacta 16386699  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 451 - 497
Target Start/End: Complemental strand, 17064932 - 17064886
Alignment:
Q  451 tatcatcgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    |||| ||||||| |||||| ||||||||||||||||| |||||||||    
T  17064932 tatcctcgtgagcttaactcaattggtagggatattgcatattatat 17064886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 21918070 - 21918164
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || ||| |||||| |||| | | | | |||||||||  | |||||||||||||||| |||||||||||    
T  21918070 ttggtagggatattgcatattatatgcaggagctggggttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagtcacta 21918164  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 25400419 - 25400325
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  25400419 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 25400325  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 31074195 - 31074085
Alignment:
Q  457 cgtgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgaga 555  Q
    |||||| |||||| | ||||||||||||||  || |||||| ||| |||||||||| |||| | | ||| ||||||||| || |||||||||| ||| |     
T  31074195 cgtgagcttaactcagttggtagggatattacattttatatgtaggagccggggttcgaaccccgaatactccacttctctacaattaaattgcgtgcgc 31074096  T
Q  556 tctagtcacta 566  Q
    ||||| |||||    
T  31074095 tctagccacta 31074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 39886264 - 39886170
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| ||||||||| ||| ||| |||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  39886264 ttggtagggatattgcatattatatgtaggagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 39886170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 566
Target Start/End: Original strand, 41156350 - 41156440
Alignment:
Q  477 tagggatattgtatattatatatagaagccggggtttgaact-cagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||| |||||||||  || |||||||||| ||||| | || | |||||||||  | |||||||| ||||||| |||||||||||    
T  41156350 tagggatattgcatattatatgcaggagccggggttcgaactccggacactccacttctccacaattaaatcgtgtgagctctagtcacta 41156440  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 43580896 - 43580990
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  43580896 ttggtagggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgagctctagccacta 43580990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 8752617 - 8752576
Alignment:
Q  456 tcgtgagtttaactgaattggtagggatattgtatattatat 497  Q
    ||||||||||| || |||||||||||||||| ||||||||||    
T  8752617 tcgtgagtttagctcaattggtagggatattatatattatat 8752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 559
Target Start/End: Complemental strand, 17175117 - 17175016
Alignment:
Q  459 tgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatc 557  Q
    ||||||||||| | ||||||||||||||| || ||||||  ||  ||||||||| ||| ||| || | |||||||||  | ||||| |||||||||||||    
T  17175117 tgagtttaactcagttggtagggatattgcatgttatatgcaggggccggggttcgaacctcggacactccacttctccacaattatattgtgtgagatc 17175018  T
Q  558 ta 559  Q
    ||    
T  17175017 ta 17175016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 563
Target Start/End: Original strand, 43328273 - 43328378
Alignment:
Q  459 tgagtttaactgaattggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatc 557  Q
    |||| |||||| | ||||||| ||||||||||||||||| ||    |||| ||||||| |||||| | ||||||||| || |||| ||||||||||  ||    
T  43328273 tgagcttaactcagttggtagagatattgtatattatatgtaaggtccggagtttgaacctcagacactccacttctctacaattgaattgtgtgaactc 43328372  T
Q  558 tagtca 563  Q
    ||||||    
T  43328373 tagtca 43328378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 4417737 - 4417649
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| |||||    
T  4417737 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctag 4417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 566
Target Start/End: Complemental strand, 25648137 - 25648042
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactc--agatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||| ||  || |||||||||| |||| |  ||| | |||||||||  | |||||||||||||||| ||||| |||||    
T  25648137 ttggtagggatattgcatattacatgcaggagccggggttcgaacccccagacactccacttctccacaattaaattgtgtgagctctagccacta 25648042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 458 - 498
Target Start/End: Original strand, 28581188 - 28581228
Alignment:
Q  458 gtgagtttaactgaattggtagggatattgtatattatata 498  Q
    ||||| |||||| ||||||||||||||||| ||||||||||    
T  28581188 gtgagcttaacttaattggtagggatattgcatattatata 28581228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Original strand, 32505706 - 32505794
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| |||||    
T  32505706 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctag 32505794  T

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Target: scaffold0608 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 8984 - 9078
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||| ||| |||| | | ||| |||||||||  | |||||||||||||||| ||||| |||||    
T  8984 ttggtagggatattgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccacta 9078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 12477 - 12571
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaactcag-atattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || || ||||||| |||| | | | |||||||||||  | |||||||||||||||| ||||| |||||    
T  12477 ttggtagggatattgcatattatatgcaggaggcggggttcgaaccccgcacattccacttctccacaattaaattgtgtgagctctagccacta 12571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 12012 - 12106
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||||||| | | || | |||||||||  | |||||||||||||||  ||||| |||||    
T  12012 ttggtagggatattgcatattatatgcaggagccggggtttgaaccccggacactccacttctccacaattaaattgtgtgaactctagccacta 12106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 59801 - 59895
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctagtcacta 566  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| ||||| |||||    
T  59801 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 59895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 11172 - 11084
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| |||||    
T  11172 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctag 11084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Complemental strand, 21500 - 21412
Alignment:
Q  473 ttggtagggatattgtatattatatatagaagccggggtttgaa-ctcagatattccacttctatataattaaattgtgtgagatctag 560  Q
    ||||||||||||||| |||||||||  || |||||||||| ||| | | || | |||||||||  | |||||||||||||||| |||||    
T  21500 ttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctag 21412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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