View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1307_low_29 (Length: 287)

Name: NF1307_low_29
Description: NF1307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1307_low_29
NF1307_low_29
[»] chr4 (31 HSPs)
chr4 (32-119)||(52756718-52756805)
chr4 (32-119)||(5986919-5987006)
chr4 (32-119)||(6121893-6121980)
chr4 (32-119)||(47833654-47833741)
chr4 (30-119)||(3372164-3372253)
chr4 (32-119)||(3993019-3993106)
chr4 (32-119)||(20538686-20538773)
chr4 (32-119)||(33621839-33621926)
chr4 (32-119)||(42797775-42797862)
chr4 (32-119)||(46797768-46797855)
chr4 (32-119)||(47838617-47838704)
chr4 (32-119)||(48336306-48336393)
chr4 (32-119)||(53337413-53337500)
chr4 (32-116)||(3422106-3422190)
chr4 (32-119)||(3904683-3904770)
chr4 (44-119)||(24704413-24704488)
chr4 (32-119)||(41469766-41469853)
chr4 (32-119)||(51894582-51894669)
chr4 (41-119)||(7579353-7579431)
chr4 (41-119)||(43900592-43900670)
chr4 (41-119)||(40913198-40913276)
chr4 (51-119)||(33551244-33551312)
chr4 (41-119)||(41615685-41615763)
chr4 (71-115)||(26231624-26231668)
chr4 (45-113)||(50430431-50430499)
chr4 (32-86)||(17236864-17236918)
chr4 (30-99)||(4780358-4780427)
chr4 (71-119)||(25855126-25855174)
chr4 (44-103)||(45478151-45478210)
chr4 (47-113)||(17344262-17344328)
chr4 (39-113)||(45725905-45725979)
[»] chr3 (30 HSPs)
chr3 (32-119)||(8437468-8437555)
chr3 (30-119)||(19557050-19557139)
chr3 (32-119)||(10298022-10298109)
chr3 (32-119)||(40690996-40691083)
chr3 (32-119)||(48340440-48340527)
chr3 (32-119)||(49823381-49823468)
chr3 (41-119)||(8817395-8817473)
chr3 (41-119)||(17653755-17653833)
chr3 (41-119)||(22721974-22722052)
chr3 (41-119)||(37508964-37509042)
chr3 (30-119)||(34080028-34080117)
chr3 (31-119)||(2787831-2787919)
chr3 (32-119)||(38964435-38964522)
chr3 (32-119)||(51406716-51406803)
chr3 (41-119)||(4238637-4238715)
chr3 (41-119)||(9111503-9111581)
chr3 (41-119)||(42507364-42507442)
chr3 (41-119)||(44785405-44785483)
chr3 (32-119)||(21295326-21295413)
chr3 (32-119)||(46208073-46208160)
chr3 (42-119)||(42170356-42170433)
chr3 (32-119)||(6013336-6013423)
chr3 (32-119)||(36095680-36095767)
chr3 (44-119)||(33942944-33943019)
chr3 (30-119)||(35513516-35513605)
chr3 (32-97)||(34988140-34988205)
chr3 (32-88)||(9213516-9213572)
chr3 (79-119)||(8951943-8951983)
chr3 (32-88)||(34988075-34988131)
chr3 (43-91)||(45652080-45652128)
[»] chr6 (23 HSPs)
chr6 (30-119)||(2830378-2830467)
chr6 (30-119)||(8382967-8383056)
chr6 (32-119)||(6068609-6068696)
chr6 (32-119)||(6330158-6330245)
chr6 (32-119)||(8417793-8417880)
chr6 (32-119)||(11572145-11572232)
chr6 (32-119)||(13853593-13853680)
chr6 (32-119)||(26602366-26602453)
chr6 (26-116)||(9644742-9644832)
chr6 (26-116)||(9650759-9650849)
chr6 (32-119)||(8099573-8099660)
chr6 (32-119)||(28747134-28747221)
chr6 (41-119)||(33052803-33052881)
chr6 (41-119)||(35031010-35031088)
chr6 (32-119)||(17992031-17992118)
chr6 (41-119)||(6143597-6143675)
chr6 (41-111)||(22896513-22896583)
chr6 (44-103)||(7596989-7597048)
chr6 (70-116)||(13043804-13043850)
chr6 (32-106)||(3788093-3788167)
chr6 (51-99)||(33393165-33393213)
chr6 (41-88)||(8186441-8186488)
chr6 (67-119)||(6068975-6069027)
[»] chr2 (26 HSPs)
chr2 (30-119)||(13197708-13197797)
chr2 (32-119)||(3055601-3055688)
chr2 (32-119)||(9047755-9047842)
chr2 (32-119)||(15896885-15896972)
chr2 (32-119)||(37990013-37990100)
chr2 (32-119)||(38917522-38917609)
chr2 (32-119)||(41478639-41478726)
chr2 (32-119)||(44398729-44398816)
chr2 (41-119)||(16243792-16243870)
chr2 (41-119)||(44397590-44397668)
chr2 (32-116)||(6648519-6648603)
chr2 (32-116)||(12337937-12338021)
chr2 (32-119)||(15372269-15372356)
chr2 (32-116)||(13344530-13344614)
chr2 (32-119)||(16044317-16044404)
chr2 (32-119)||(37666610-37666697)
chr2 (32-119)||(41492896-41492983)
chr2 (41-116)||(44804587-44804662)
chr2 (32-116)||(30099182-30099266)
chr2 (71-119)||(4683971-4684019)
chr2 (47-119)||(12170414-12170486)
chr2 (43-113)||(16734832-16734902)
chr2 (72-119)||(41453102-41453149)
chr2 (47-113)||(11582647-11582713)
chr2 (47-91)||(15243990-15244034)
chr2 (43-99)||(44425028-44425084)
[»] chr8 (28 HSPs)
chr8 (32-119)||(54612-54699)
chr8 (32-119)||(2890162-2890249)
chr8 (32-119)||(6552698-6552785)
chr8 (32-119)||(7785778-7785865)
chr8 (32-119)||(33289261-33289348)
chr8 (32-119)||(39571203-39571290)
chr8 (41-119)||(31654656-31654734)
chr8 (30-119)||(3304276-3304365)
chr8 (32-119)||(7805699-7805786)
chr8 (32-119)||(12763654-12763741)
chr8 (32-119)||(25601000-25601087)
chr8 (32-119)||(43199354-43199441)
chr8 (32-119)||(44498187-44498274)
chr8 (41-119)||(12343149-12343227)
chr8 (32-116)||(32211363-32211447)
chr8 (32-119)||(32114475-32114562)
chr8 (41-119)||(7012214-7012292)
chr8 (46-119)||(15888366-15888439)
chr8 (47-119)||(13578900-13578972)
chr8 (32-113)||(27422239-27422320)
chr8 (41-113)||(8587219-8587291)
chr8 (48-99)||(35564706-35564757)
chr8 (44-113)||(28463660-28463729)
chr8 (41-113)||(24691988-24692059)
chr8 (47-106)||(17006967-17007026)
chr8 (47-106)||(17570221-17570280)
chr8 (41-86)||(28463620-28463665)
chr8 (44-85)||(30171494-30171535)
[»] chr7 (21 HSPs)
chr7 (32-119)||(1565729-1565816)
chr7 (32-119)||(1738447-1738534)
chr7 (32-119)||(7240792-7240879)
chr7 (32-119)||(9268799-9268886)
chr7 (32-119)||(46840903-46840990)
chr7 (29-119)||(22285742-22285832)
chr7 (30-119)||(31319397-31319486)
chr7 (42-119)||(38063923-38064000)
chr7 (32-119)||(7482268-7482355)
chr7 (32-119)||(23314139-23314226)
chr7 (41-119)||(33418419-33418497)
chr7 (41-119)||(38441503-38441581)
chr7 (42-119)||(36016206-36016283)
chr7 (44-119)||(94330-94405)
chr7 (44-119)||(36583438-36583513)
chr7 (41-116)||(4790294-4790369)
chr7 (32-119)||(28536751-28536838)
chr7 (41-114)||(40840128-40840201)
chr7 (32-111)||(9575460-9575539)
chr7 (41-103)||(7269414-7269476)
chr7 (42-91)||(7661147-7661196)
[»] chr5 (25 HSPs)
chr5 (32-119)||(9395393-9395480)
chr5 (32-119)||(36563538-36563625)
chr5 (32-119)||(37148955-37149042)
chr5 (32-119)||(41989407-41989494)
chr5 (41-119)||(23359985-23360063)
chr5 (43-119)||(11795211-11795287)
chr5 (32-119)||(13103067-13103154)
chr5 (32-119)||(26350350-26350437)
chr5 (31-116)||(6126870-6126955)
chr5 (44-119)||(13033094-13033169)
chr5 (32-119)||(17025667-17025754)
chr5 (32-119)||(21575989-21576076)
chr5 (32-119)||(37641997-37642084)
chr5 (52-119)||(583032-583099)
chr5 (32-119)||(20848117-20848203)
chr5 (41-119)||(4444003-4444081)
chr5 (32-113)||(35904448-35904527)
chr5 (44-99)||(9006894-9006949)
chr5 (46-113)||(2366352-2366419)
chr5 (224-259)||(30855444-30855479)
chr5 (45-113)||(39290823-39290891)
chr5 (74-109)||(13539909-13539944)
chr5 (84-119)||(38361743-38361778)
chr5 (43-113)||(966197-966267)
chr5 (41-114)||(36595783-36595856)
[»] chr1 (36 HSPs)
chr1 (32-119)||(14984880-14984967)
chr1 (32-119)||(27159358-27159445)
chr1 (32-119)||(31842795-31842882)
chr1 (32-119)||(39401966-39402053)
chr1 (32-119)||(44668093-44668180)
chr1 (41-119)||(9981690-9981768)
chr1 (32-119)||(11795976-11796063)
chr1 (32-119)||(25694362-25694449)
chr1 (32-119)||(26471065-26471152)
chr1 (32-119)||(47216699-47216786)
chr1 (32-119)||(47777481-47777568)
chr1 (41-119)||(44955215-44955293)
chr1 (32-116)||(34042742-34042826)
chr1 (32-119)||(1050931-1051018)
chr1 (32-119)||(47588337-47588424)
chr1 (32-119)||(12483628-12483715)
chr1 (32-114)||(17556801-17556883)
chr1 (52-116)||(23278021-23278085)
chr1 (32-119)||(47969738-47969825)
chr1 (32-110)||(11989833-11989911)
chr1 (32-113)||(11897103-11897184)
chr1 (41-113)||(37552190-37552262)
chr1 (30-113)||(16448106-16448189)
chr1 (44-113)||(1598394-1598461)
chr1 (42-114)||(12213484-12213556)
chr1 (32-88)||(16448182-16448238)
chr1 (32-88)||(21537943-21537999)
chr1 (47-97)||(17167768-17167818)
chr1 (68-113)||(571556-571601)
chr1 (32-97)||(5392211-5392276)
chr1 (29-86)||(40676865-40676922)
chr1 (32-88)||(11897054-11897110)
chr1 (38-86)||(12043610-12043658)
chr1 (41-88)||(12062569-12062616)
chr1 (41-113)||(12069535-12069607)
chr1 (36-88)||(45871206-45871258)
[»] scaffold1707 (1 HSPs)
scaffold1707 (44-119)||(1378-1453)
[»] scaffold0482 (1 HSPs)
scaffold0482 (32-119)||(12903-12990)
[»] scaffold0204 (1 HSPs)
scaffold0204 (32-119)||(23828-23915)
[»] scaffold0009 (1 HSPs)
scaffold0009 (32-119)||(49548-49635)
[»] scaffold0464 (1 HSPs)
scaffold0464 (32-119)||(6131-6218)
[»] scaffold0650 (1 HSPs)
scaffold0650 (48-113)||(1-66)
[»] scaffold0011 (1 HSPs)
scaffold0011 (32-113)||(231303-231384)


Alignment Details
Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 52756805 - 52756718
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52756805 tactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 52756718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 5987006 - 5986919
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5987006 tactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcactt 5986919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 6121893 - 6121980
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 6121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 47833741 - 47833654
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 47833654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 3372253 - 3372164
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372253 actactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 3372164  T

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Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 3993106 - 3993019
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3993106 tactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 3993019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 20538686 - 20538773
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcactt 20538773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 33621926 - 33621839
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33621926 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 33621839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 42797862 - 42797775
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 42797775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 46797855 - 46797768
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcactt 46797768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 47838617 - 47838704
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47838617 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 47838704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 48336393 - 48336306
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336393 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 48336306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 53337500 - 53337413
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53337500 tactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 53337413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 3422190 - 3422106
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3422190 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca 3422106  T

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Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 3904683 - 3904770
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  3904683 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcactt 3904770  T

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Target: chr4; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 24704488 - 24704413
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24704488 tcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcactt 24704413  T

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Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 41469766 - 41469853
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41469766 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 41469853  T

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Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 51894582 - 51894669
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcactt 51894669  T

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Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 7579431 - 7579353
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7579431 cggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 7579353  T

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Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 43900670 - 43900592
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43900670 cggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttactt 43900592  T

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Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 40913198 - 40913276
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| |||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  40913198 cggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcactt 40913276  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 33551312 - 33551244
Alignment:
Q  51 tataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| ||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcactt 33551244  T

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Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 41615685 - 41615763
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||  |||  ||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  41615685 cggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaactt 41615763  T

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Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 26231668 - 26231624
Alignment:
Q  71 acaaaagttgatgtatctagttaaaaattcagtccaaatacattc 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  26231668 acaaaagttgatatatctagttaaaaattcagtccaaatacattc 26231624  T

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Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 50430431 - 50430499
Alignment:
Q  45 cctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||| | |  |||| |||||||||| ||||||||||| |||||||||||| |||||||||||    
T  50430431 cctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacat 50430499  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 17236918 - 17236864
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtat 86  Q
    |||||||| ||||||||||||||| | || |||| ||||||||||||||||||||    
T  17236918 tactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 4780427 - 4780358
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaatt 99  Q
    ||||||| || ||||||||||||||| |||| |||  ||||||||||||| ||||||||  |||||||||    
T  4780427 actactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

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Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 25855174 - 25855126
Alignment:
Q  71 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||| ||||||| | ||||||||||||||||||||||||| ||||    
T  25855174 acaaaagtcgatgtatttggttaaaaattcagtccaaatacattaactt 25855126  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 45478210 - 45478151
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagt 103  Q
    |||||||||||| |||| | || ||||| |||||||||||||||  ||||||||||||||    
T  45478210 tcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagt 45478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 17344328 - 17344262
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||| |||| ||||  ||||||||||||||||||||   ||||||||||||| || ||||||    
T  17344328 tatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacat 17344262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 45725979 - 45725905
Alignment:
Q  39 ttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||||||||| ||||  ||  ||||||||||||| | |||| ||||||| |||| |||| ||||||||    
T  45725979 ttcggtcctatttataagagaaagtttcgtcaacaaaagttaacgtatttagttaagaatttagtctaaatacat 45725905  T

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Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 8437555 - 8437468
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8437555 tactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 8437468  T

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Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 19557050 - 19557139
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557050 actactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 19557139  T

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Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 10298109 - 10298022
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298109 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 10298022  T

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Target: chr3; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 40690996 - 40691083
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40690996 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 40691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 48340527 - 48340440
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 48340440  T

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Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 49823381 - 49823468
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823381 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 49823468  T

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Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 8817395 - 8817473
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8817395 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 8817473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 17653833 - 17653755
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17653833 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 17653755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 22722052 - 22721974
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22722052 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 22721974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 37509042 - 37508964
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37509042 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 37508964  T

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Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 34080028 - 34080117
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34080028 actactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcactt 34080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 2787831 - 2787919
Alignment:
Q  31 ctactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||| || ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2787831 ctactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 2787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 38964522 - 38964435
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 38964435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 51406803 - 51406716
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51406803 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcactt 51406716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 4238715 - 4238637
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4238715 cggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 4238637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 9111503 - 9111581
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9111503 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcactt 9111581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 42507364 - 42507442
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42507364 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcactt 42507442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 44785405 - 44785483
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785405 cggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 44785483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 21295326 - 21295413
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcactt 21295413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 46208160 - 46208073
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46208160 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 46208073  T

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Target: chr3; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 42170356 - 42170433
Alignment:
Q  42 ggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcactt 42170433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 6013336 - 6013423
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  6013336 tactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcactt 6013423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 36095680 - 36095767
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||| |||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36095680 tactcactccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 36095767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 33942944 - 33943019
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33942944 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaactt 33943019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 35513605 - 35513516
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || || |||||||||||| |||||| ||  |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  35513605 actactccctccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcactt 35513516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 34988205 - 34988140
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaa 97  Q
    ||||| || ||||||||||||||| | |  ||||||||||||| ||||||||||||||||||||||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaa 34988140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 9213516 - 9213572
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    ||||| || ||||||||||||||| |||  ||| |||||||||||||||||||||||    
T  9213516 tactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatct 9213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 8951943 - 8951983
Alignment:
Q  79 tgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||| | ||||||||||||||||||||||||| ||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaactt 8951983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 34988075 - 34988131
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    ||||| |||||||||||||||| | |||  |||| |||||||||||||||| |||||    
T  34988075 tactcccttcggtcctatttattagagacatttgggtcaacaaaagttgatctatct 34988131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 45652080 - 45652128
Alignment:
Q  43 gtcctatttataacagaattttgagtcaacaaaagttgatgtatctagt 91  Q
    ||||||||||||| |||  ||||||||||||||| | ||||||||||||    
T  45652080 gtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 2830467 - 2830378
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830467 actactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 2830378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 8382967 - 8383056
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8382967 actactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 8383056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 6068696 - 6068609
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6068696 tactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 6068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 6330245 - 6330158
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330245 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 6330158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 8417793 - 8417880
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 8417880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 11572145 - 11572232
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572145 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 11572232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 13853593 - 13853680
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13853593 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 13853680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 26602453 - 26602366
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602453 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 26602366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 9644832 - 9644742
Alignment:
Q  26 agtaactactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9644832 agtaaatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 9644742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 9650849 - 9650759
Alignment:
Q  26 agtaactactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9650849 agtaaatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 9650759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 8099660 - 8099573
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8099660 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 8099573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 28747134 - 28747221
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28747134 tactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcactt 28747221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 33052803 - 33052881
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33052803 cggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 33052881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 35031010 - 35031088
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35031010 cggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcactt 35031088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 17992118 - 17992031
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  17992118 tactcccttcggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcactt 17992031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 6143675 - 6143597
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6143675 cggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 6143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 22896583 - 22896513
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac 111  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22896583 cggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac 22896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 7596989 - 7597048
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagt 103  Q
    |||||||||||  |||| |||||||||| |||||||||||||| ||||||||||||||||    
T  7596989 tcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagt 7597048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 13043850 - 13043804
Alignment:
Q  70 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattca 13043804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 3788167 - 3788093
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtcca 106  Q
    ||||| || ||||| ||||||||| | || |||  |||||||||||||||||||| ||||||| |||||||||||    
T  3788167 tactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtcca 3788093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 33393165 - 33393213
Alignment:
Q  51 tataacagaattttgagtcaacaaaagttgatgtatctagttaaaaatt 99  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||    
T  33393165 tataagagaaatttgagtcaataaaagttgatgtatctagtttaaaatt 33393213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 8186488 - 8186441
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    ||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  8186488 cggtcctatttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 6068975 - 6069027
Alignment:
Q  67 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||| ||| ||||| ||||||||||| || ||||||||||| ||||    
T  6068975 gtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaactt 6069027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 13197708 - 13197797
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197708 actactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 13197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 3055688 - 3055601
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055688 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 3055601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 9047755 - 9047842
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9047755 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 9047842  T

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Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 15896972 - 15896885
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 15896885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 37990013 - 37990100
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990013 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 37990100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 38917522 - 38917609
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38917522 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 38917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 41478639 - 41478726
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41478639 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 41478726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 44398816 - 44398729
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398816 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 44398729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 16243792 - 16243870
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16243792 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 16243870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 44397668 - 44397590
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397668 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 44397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 6648519 - 6648603
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6648519 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 6648603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 12337937 - 12338021
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 12338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 15372356 - 15372269
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcactt 15372269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 13344614 - 13344530
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13344614 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 13344530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 16044317 - 16044404
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcactt 16044404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 37666610 - 37666697
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  37666610 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcactt 37666697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 41492896 - 41492983
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41492896 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcactt 41492983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 44804587 - 44804662
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44804587 cggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 44804662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 30099182 - 30099266
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || ||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  30099182 tactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattca 30099266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 4683971 - 4684019
Alignment:
Q  71 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683971 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 4684019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 12170414 - 12170486
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||| ||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  12170414 tatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaactt 12170486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 16734902 - 16734832
Alignment:
Q  43 gtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||| | ||||||||||||||||| ||||||    
T  16734902 gtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacat 16734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 41453149 - 41453102
Alignment:
Q  72 caaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaactt 41453102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 11582647 - 11582713
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||| ||  ||||||||||||||||||||||| |||||||| ||||||  | ||||||||||    
T  11582647 tatttataaaagggttttgagtcaacaaaagttgatgaatctagttcaaaatttggaccaaatacat 11582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 15243990 - 15244034
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagt 91  Q
    ||||||||| |||  ||||| ||||||||||||||||||||||||    
T  15243990 tatttataagagatatttgaatcaacaaaagttgatgtatctagt 15244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 44425084 - 44425028
Alignment:
Q  43 gtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaatt 99  Q
    |||||||| |||| |||  ||||| |||||||||||| |||||||||||| ||||||    
T  44425084 gtcctattaataagagatatttgaatcaacaaaagtttatgtatctagttcaaaatt 44425028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 54612 - 54699
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54612 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 54699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 2890162 - 2890249
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890162 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 2890249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 6552785 - 6552698
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 6552698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 7785778 - 7785865
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785778 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 7785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 33289261 - 33289348
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 33289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 39571203 - 39571290
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39571203 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 39571290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 31654734 - 31654656
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31654734 cggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 31654656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 3304276 - 3304365
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304276 actactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 3304365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 7805699 - 7805786
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805699 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 7805786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 12763654 - 12763741
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12763654 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 12763741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 25601000 - 25601087
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25601000 tactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcactt 25601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 43199354 - 43199441
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43199354 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 43199441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 44498187 - 44498274
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44498187 tactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 44498274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 12343149 - 12343227
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343149 cggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 12343227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 32211363 - 32211447
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32211363 tactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattca 32211447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 32114475 - 32114562
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32114475 tactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcactt 32114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 7012292 - 7012214
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7012292 cggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcactt 7012214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 15888366 - 15888439
Alignment:
Q  46 ctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15888366 ctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 15888439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 13578972 - 13578900
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13578972 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcactt 13578900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 27422320 - 27422239
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||| |||||||||||||||||| |||| |||| |||||||||| |  |||||||| ||||||||||||||||||||||||    
T  27422320 tactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 8587291 - 8587219
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||| ||||||||| ||||  ||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  8587291 cggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacat 8587219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 35564706 - 35564757
Alignment:
Q  48 atttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaatt 99  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||| ||||||    
T  35564706 atttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 28463729 - 28463660
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||  |||||| ||| |||| | ||||||||| ||||| ||| ||||||||||||||||||||    
T  28463729 tcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacat 28463660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 24691988 - 24692059
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||| ||| |||| |||| |||||||||||||||| ||||| ||| |||||||||| || ||||||    
T  24691988 cggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggtt-aaaattcagttcagatacat 24692059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 17007026 - 17006967
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtcca 106  Q
    ||||||||| |||| ||| |||||| ||||||||||||||||  |||| |||||||||||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtcca 17006967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 17570221 - 17570280
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtcca 106  Q
    ||||||||| |||| ||| |||||| ||||||||||||||||  |||| |||||||||||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtcca 17570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 28463620 - 28463665
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtat 86  Q
    ||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  28463620 cggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 30171494 - 30171535
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgta 85  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  30171494 tcctatttacaagagaattttgagtcaacaaaagttaatgta 30171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 8e-33; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 1565729 - 1565816
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565729 tactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 1565816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 1738447 - 1738534
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738447 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 1738534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 7240879 - 7240792
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240879 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 7240792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 9268886 - 9268799
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9268886 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 9268799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 46840990 - 46840903
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 46840903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 22285832 - 22285742
Alignment:
Q  29 aactactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22285832 aactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 22285742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 31319397 - 31319486
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||| || |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319397 actactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 31319486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 38063923 - 38064000
Alignment:
Q  42 ggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38063923 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 38064000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 7482355 - 7482268
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7482355 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcactt 7482268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 23314139 - 23314226
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcactt 23314226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 33418497 - 33418419
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33418497 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 33418419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 38441581 - 38441503
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38441581 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcactt 38441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 36016206 - 36016283
Alignment:
Q  42 ggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 36016283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 94330 - 94405
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  94330 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcactt 94405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 36583513 - 36583438
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36583513 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcactt 36583438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 4790369 - 4790294
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4790369 cggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattca 4790294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 28536751 - 28536838
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  28536751 tactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcactt 28536838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 40840128 - 40840201
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 114  Q
    ||||||||||||||| |||| |||  |||||||||||||||||||  |||||||||||||||||||||||||||    
T  40840128 cggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacatt 40840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 9575539 - 9575460
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac 111  Q
    ||||| |||||||||||||||||| ||||  ||  |||||||||| ||||||||||||||||||||||||||| ||||||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatac 9575460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 7269414 - 7269476
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagt 103  Q
    ||||||||||||||| ||||  ||| || |||||||||||||| |||| ||||||||||||||    
T  7269414 cggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagt 7269476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 7661196 - 7661147
Alignment:
Q  42 ggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagt 91  Q
    |||||||||||||  |||  |||| |||||||||||||||||||||||||    
T  7661196 ggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 9395480 - 9395393
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395480 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 9395393  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 36563538 - 36563625
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36563538 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 36563625  T

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Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 37148955 - 37149042
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 37149042  T

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Target: chr5; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 41989407 - 41989494
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41989407 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 41989494  T

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Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 23360063 - 23359985
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23360063 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 23359985  T

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Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 11795287 - 11795211
Alignment:
Q  43 gtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11795287 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 11795211  T

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Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 13103154 - 13103067
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13103154 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 13103067  T

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Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 26350350 - 26350437
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26350350 tactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 26350437  T

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Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 6126955 - 6126870
Alignment:
Q  31 ctactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    |||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6126955 ctactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattca 6126870  T

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Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 13033169 - 13033094
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13033169 tcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcactt 13033094  T

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Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 17025754 - 17025667
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  17025754 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcactt 17025667  T

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Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 21576076 - 21575989
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21576076 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcactt 21575989  T

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Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 37642084 - 37641997
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  37642084 tactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactt 37641997  T

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Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 583099 - 583032
Alignment:
Q  52 ataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 583032  T

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Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 20848203 - 20848117
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20848203 tactccctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcactt 20848117  T

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Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 4444081 - 4444003
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| ||||||||| ||||||||   |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  4444081 cggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcactt 4444003  T

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Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 35904527 - 35904448
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    |||||||||||||| ||||||| | ||||  || |||||||||||||  |||||| ||||||||||||||||||||||||||    
T  35904527 tactctcttcggtcttatttattagagaaaatttagtcaacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

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Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 9006894 - 9006949
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaatt 99  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||    
T  9006894 tcctatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 2366352 - 2366419
Alignment:
Q  46 ctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    |||||||||| |||| |||| |||||||| |||| |||||| | ||||||| ||||||||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacat 2366419  T

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Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 30855479 - 30855444
Alignment:
Q  224 ttgagcgtgttaggattcttagcatctcatatttgt 259  Q
    ||||||||||||||||||||||||||||||||||||    
T  30855479 ttgagcgtgttaggattcttagcatctcatatttgt 30855444  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 39290891 - 39290823
Alignment:
Q  45 cctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||| ||||  | || |||||||||||| ||||||||| ||||||||| | |||||||||||    
T  39290891 cctatttataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaatccaaatacat 39290823  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 13539909 - 13539944
Alignment:
Q  74 aaagttgatgtatctagttaaaaattcagtccaaat 109  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaat 13539944  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 38361743 - 38361778
Alignment:
Q  84 tatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||| |||||||||||||||||||||||||||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcactt 38361778  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 966267 - 966197
Alignment:
Q  43 gtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||||| |||| ||||  ||||||||| |  |||||||| ||||||||||||||| | ||||||    
T  966267 gtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacat 966197  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 36595783 - 36595856
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 114  Q
    ||||| ||||||||| ||||  ||  |||||||||| |||||||||||  |||||||||||||| | |||||||    
T  36595783 cggtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtctagatacatt 36595856  T

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Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 14984967 - 14984880
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984967 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 14984880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 27159358 - 27159445
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 27159445  T

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Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 31842795 - 31842882
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 31842882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 39401966 - 39402053
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 39402053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 44668093 - 44668180
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 44668180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 9981768 - 9981690
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981768 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 9981690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 11796063 - 11795976
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcactt 11795976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 25694449 - 25694362
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25694449 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactt 25694362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 26471065 - 26471152
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 26471152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 47216699 - 47216786
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216699 tactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 47216786  T

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Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 47777481 - 47777568
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcactt 47777568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 44955215 - 44955293
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44955215 cggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 44955293  T

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Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 34042826 - 34042742
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    ||||| || |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34042826 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 34042742  T

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Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 1051018 - 1050931
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1051018 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcactt 1050931  T

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Target: chr1; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 47588337 - 47588424
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| |||||||  ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47588337 tactcccttcggttttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcactt 47588424  T

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Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 12483628 - 12483715
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  12483628 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcactt 12483715  T

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Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 17556883 - 17556801
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 114  Q
    ||||| || ||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17556883 tactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 17556801  T

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Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23278021 - 23278085
Alignment:
Q  52 ataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 116  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattca 23278085  T

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Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 47969825 - 47969738
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  47969825 tactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttactt 47969738  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 11989911 - 11989833
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 110  Q
    ||||| || ||||||||||||||| |||| |||||||||| |||| ||||||||| | |||||||||||||||||||||    
T  11989911 tactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaata 11989833  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 11897184 - 11897103
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||| || ||||||||||||||| |||| |||| |||||||||||||||||||||  |||||||||||||| || ||||||    
T  11897184 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacat 11897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 37552262 - 37552190
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||||||||||| |||| |||| |||||||||| |  |||||||| ||||||||||||||||| ||||||    
T  37552262 cggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacat 37552190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 16448106 - 16448189
Alignment:
Q  30 actactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||||| || ||||| ||||||||   |||| ||| ||||||||||||| |||||||| ||| ||||||||||||| ||||||    
T  16448106 actactcactccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacat 16448189  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 1598394 - 1598461
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    |||||||||||| |||| | || |||||||||| ||||||||| | ||||||||||||||||||||||||    
T  1598394 tcctatttataagagaaatatg-gtcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 12213484 - 12213556
Alignment:
Q  42 ggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 114  Q
    |||||||||||| | ||||  ||| |||||||||| ||||| ||| |||||||||||||| || |||||||||    
T  12213484 ggtcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacatt 12213556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 16448238 - 16448182
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    ||||| || ||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  16448238 tactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 21537999 - 21537943
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    |||||||| || || ||||||||| ||||  ||||||||||||||||||||||||||    
T  21537999 tactctctccgatcttatttataagagaaaattgagtcaacaaaagttgatgtatct 21537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 17167818 - 17167768
Alignment:
Q  47 tatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaa 97  Q
    |||||| || |||| |||||||||||||||||| ||||||||| |||||||    
T  17167818 tatttacaaaagaaatttgagtcaacaaaagttaatgtatctaattaaaaa 17167768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 571601 - 571556
Alignment:
Q  68 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    |||||||||||| ||||| |||||| ||||||||||| ||||||||    
T  571601 tcaacaaaagttaatgtacctagttcaaaattcagtctaaatacat 571556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 5392276 - 5392211
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaa 97  Q
    ||||||||||||||| || ||||| |||| |||  ||||| |||||||||||||| | ||||||||    
T  5392276 tactctcttcggtccaatatataagagaaatttaggtcaataaaagttgatgtatttggttaaaaa 5392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 40676922 - 40676865
Alignment:
Q  29 aactactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtat 86  Q
    ||||||||  |||| |||||||||||||| || ||| |||||||||||||| ||||||    
T  40676922 aactactccattcgatcctatttataacaaaaatttcagtcaacaaaagttaatgtat 40676865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 11897054 - 11897110
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    ||||| || ||||||||||||||| ||||  ||  ||||||||||||||||||||||    
T  11897054 tactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatct 11897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 12043610 - 12043658
Alignment:
Q  38 cttcggtcctatttataacagaattttgagtcaacaaaagttgatgtat 86  Q
    ||||| |||||||||||| |||  ||| |||||||||||||||||||||    
T  12043610 cttcgatcctatttataaaagatatttaagtcaacaaaagttgatgtat 12043658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 12062569 - 12062616
Alignment:
Q  41 cggtcctatttataacaga-attttgagtcaacaaaagttgatgtatct 88  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  12062569 cggtcctatttataaaagatattttga-tcaacaaaagttgatgtatct 12062616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 12069607 - 12069535
Alignment:
Q  41 cggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||| ||||||||| ||||  ||||||  | |||||||||| ||||  ||||||||||||||| ||||||||    
T  12069607 cggtcttatttataagagaaaattgagttgataaaagttgatttatcaggttaaaaattcagtctaaatacat 12069535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 45871206 - 45871258
Alignment:
Q  36 ctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatct 88  Q
    ||||||| |||||||||||| |||  |||||||||||| |||||||| |||||    
T  45871206 ctcttcgatcctatttataagagatgtttgagtcaacagaagttgatatatct 45871258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 1453 - 1378
Alignment:
Q  44 tcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 12990 - 12903
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12990 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 12903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 23915 - 23828
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23915 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 23828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 49635 - 49548
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcactt 49548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 6131 - 6218
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactt 119  Q
    ||||| || ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6131 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcactt 6218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 1 - 66
Alignment:
Q  48 atttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    |||||||| ||||  | |||||||||||||||||||||| | |||||||||| |||||||||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacat 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 231303 - 231384
Alignment:
Q  32 tactctcttcggtcctatttataacagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacat 113  Q
    ||||| || ||||||||||||||  ||||| ||  |||||||||||||||| || |||||| ||||||||||||| ||||||    
T  231303 tactccctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacat 231384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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