View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1307_low_30 (Length: 273)
Name: NF1307_low_30
Description: NF1307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1307_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 35520600 - 35520763
Alignment:
| Q |
17 |
agagctcatggggatgagaataagagtagtgtagcattgagcaatccaattaataagaatagagattatttgatgagtatgaaaaataagaaatgttcat |
116 |
Q |
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| T |
35520600 |
agagctcatggggatgagtacaagagtagtgcagcattgagcaatccaattaataagaatagagattatttgatgagtatgaaaaataggaaatattcat |
35520699 |
T |
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| Q |
117 |
gtcctcaagaagggtgtagatggaaccaaaagcatgtcaagtttcaaccattgaagtcattgat |
180 |
Q |
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||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
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| T |
35520700 |
gtcctcaagcagggtgtagatggaaccaaaaacatgccaagtttcaaccattgaagtcattgat |
35520763 |
T |
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