View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1307_low_6 (Length: 611)

Name: NF1307_low_6
Description: NF1307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1307_low_6
NF1307_low_6
[»] chr5 (27 HSPs)
chr5 (368-569)||(30856012-30856205)
chr5 (237-391)||(30855857-30856010)
chr5 (89-176)||(9395393-9395480)
chr5 (89-176)||(36563538-36563625)
chr5 (89-176)||(37148955-37149042)
chr5 (89-176)||(41989407-41989494)
chr5 (89-167)||(23359985-23360063)
chr5 (89-165)||(11795211-11795287)
chr5 (89-176)||(13103067-13103154)
chr5 (89-176)||(26350350-26350437)
chr5 (92-177)||(6126870-6126955)
chr5 (89-164)||(13033094-13033169)
chr5 (89-176)||(17025667-17025754)
chr5 (89-176)||(21575989-21576076)
chr5 (89-176)||(37641997-37642084)
chr5 (89-156)||(583032-583099)
chr5 (89-176)||(20848117-20848203)
chr5 (173-233)||(30855557-30855617)
chr5 (89-167)||(4444003-4444081)
chr5 (95-176)||(35904448-35904527)
chr5 (109-164)||(9006894-9006949)
chr5 (95-162)||(2366352-2366419)
chr5 (95-163)||(39290823-39290891)
chr5 (99-134)||(13539909-13539944)
chr5 (89-124)||(38361743-38361778)
chr5 (95-165)||(966197-966267)
chr5 (94-167)||(36595783-36595856)
[»] chr4 (31 HSPs)
chr4 (89-176)||(52756718-52756805)
chr4 (89-176)||(5986919-5987006)
chr4 (89-176)||(6121893-6121980)
chr4 (89-176)||(47833654-47833741)
chr4 (89-178)||(3372164-3372253)
chr4 (89-176)||(3993019-3993106)
chr4 (89-176)||(20538686-20538773)
chr4 (89-176)||(33621839-33621926)
chr4 (89-176)||(42797775-42797862)
chr4 (89-176)||(46797768-46797855)
chr4 (89-176)||(47838617-47838704)
chr4 (89-176)||(48336306-48336393)
chr4 (89-176)||(53337413-53337500)
chr4 (92-176)||(3422106-3422190)
chr4 (89-176)||(3904683-3904770)
chr4 (89-164)||(24704413-24704488)
chr4 (89-176)||(41469766-41469853)
chr4 (89-176)||(51894582-51894669)
chr4 (89-167)||(7579353-7579431)
chr4 (89-167)||(43900592-43900670)
chr4 (89-167)||(40913198-40913276)
chr4 (89-157)||(33551244-33551312)
chr4 (89-167)||(41615685-41615763)
chr4 (93-137)||(26231624-26231668)
chr4 (95-163)||(50430431-50430499)
chr4 (122-176)||(17236864-17236918)
chr4 (109-178)||(4780358-4780427)
chr4 (89-137)||(25855126-25855174)
chr4 (105-164)||(45478151-45478210)
chr4 (95-161)||(17344262-17344328)
chr4 (95-169)||(45725905-45725979)
[»] chr3 (30 HSPs)
chr3 (89-176)||(8437468-8437555)
chr3 (89-178)||(19557050-19557139)
chr3 (89-176)||(10298022-10298109)
chr3 (89-176)||(40690996-40691083)
chr3 (89-176)||(48340440-48340527)
chr3 (89-176)||(49823381-49823468)
chr3 (89-167)||(8817395-8817473)
chr3 (89-167)||(17653755-17653833)
chr3 (89-167)||(22721974-22722052)
chr3 (89-167)||(37508964-37509042)
chr3 (89-178)||(34080028-34080117)
chr3 (89-177)||(2787831-2787919)
chr3 (89-176)||(38964435-38964522)
chr3 (89-176)||(51406716-51406803)
chr3 (89-167)||(4238637-4238715)
chr3 (89-167)||(9111503-9111581)
chr3 (89-167)||(42507364-42507442)
chr3 (89-167)||(44785405-44785483)
chr3 (89-176)||(21295326-21295413)
chr3 (89-176)||(46208073-46208160)
chr3 (89-166)||(42170356-42170433)
chr3 (89-176)||(6013336-6013423)
chr3 (89-176)||(36095680-36095767)
chr3 (89-164)||(33942944-33943019)
chr3 (89-178)||(35513516-35513605)
chr3 (111-176)||(34988140-34988205)
chr3 (120-176)||(9213516-9213572)
chr3 (89-129)||(8951943-8951983)
chr3 (120-176)||(34988075-34988131)
chr3 (117-165)||(45652080-45652128)
[»] chr6 (23 HSPs)
chr6 (89-178)||(2830378-2830467)
chr6 (89-178)||(8382967-8383056)
chr6 (89-176)||(6068609-6068696)
chr6 (89-176)||(6330158-6330245)
chr6 (89-176)||(8417793-8417880)
chr6 (89-176)||(11572145-11572232)
chr6 (89-176)||(13853593-13853680)
chr6 (89-176)||(26602366-26602453)
chr6 (92-182)||(9644742-9644832)
chr6 (92-182)||(9650759-9650849)
chr6 (89-176)||(8099573-8099660)
chr6 (89-176)||(28747134-28747221)
chr6 (89-167)||(33052803-33052881)
chr6 (89-167)||(35031010-35031088)
chr6 (89-176)||(17992031-17992118)
chr6 (89-167)||(6143597-6143675)
chr6 (97-167)||(22896513-22896583)
chr6 (105-164)||(7596989-7597048)
chr6 (92-138)||(13043804-13043850)
chr6 (102-176)||(3788093-3788167)
chr6 (109-157)||(33393165-33393213)
chr6 (120-167)||(8186441-8186488)
chr6 (89-141)||(6068975-6069027)
[»] chr2 (26 HSPs)
chr2 (89-178)||(13197708-13197797)
chr2 (89-176)||(3055601-3055688)
chr2 (89-176)||(9047755-9047842)
chr2 (89-176)||(15896885-15896972)
chr2 (89-176)||(37990013-37990100)
chr2 (89-176)||(38917522-38917609)
chr2 (89-176)||(41478639-41478726)
chr2 (89-176)||(44398729-44398816)
chr2 (89-167)||(16243792-16243870)
chr2 (89-167)||(44397590-44397668)
chr2 (92-176)||(6648519-6648603)
chr2 (92-176)||(12337937-12338021)
chr2 (89-176)||(15372269-15372356)
chr2 (92-176)||(13344530-13344614)
chr2 (89-176)||(16044317-16044404)
chr2 (89-176)||(37666610-37666697)
chr2 (89-176)||(41492896-41492983)
chr2 (92-167)||(44804587-44804662)
chr2 (92-176)||(30099182-30099266)
chr2 (89-137)||(4683971-4684019)
chr2 (89-161)||(12170414-12170486)
chr2 (95-165)||(16734832-16734902)
chr2 (89-136)||(41453102-41453149)
chr2 (95-161)||(11582647-11582713)
chr2 (117-161)||(15243990-15244034)
chr2 (109-165)||(44425028-44425084)
[»] chr8 (28 HSPs)
chr8 (89-176)||(54612-54699)
chr8 (89-176)||(2890162-2890249)
chr8 (89-176)||(6552698-6552785)
chr8 (89-176)||(7785778-7785865)
chr8 (89-176)||(33289261-33289348)
chr8 (89-176)||(39571203-39571290)
chr8 (89-167)||(31654656-31654734)
chr8 (89-178)||(3304276-3304365)
chr8 (89-176)||(7805699-7805786)
chr8 (89-176)||(12763654-12763741)
chr8 (89-176)||(25601000-25601087)
chr8 (89-176)||(43199354-43199441)
chr8 (89-176)||(44498187-44498274)
chr8 (89-167)||(12343149-12343227)
chr8 (92-176)||(32211363-32211447)
chr8 (89-176)||(32114475-32114562)
chr8 (89-167)||(7012214-7012292)
chr8 (89-162)||(15888366-15888439)
chr8 (89-161)||(13578900-13578972)
chr8 (95-176)||(27422239-27422320)
chr8 (95-167)||(8587219-8587291)
chr8 (109-160)||(35564706-35564757)
chr8 (95-164)||(28463660-28463729)
chr8 (95-167)||(24691988-24692059)
chr8 (102-161)||(17006967-17007026)
chr8 (102-161)||(17570221-17570280)
chr8 (122-167)||(28463620-28463665)
chr8 (123-164)||(30171494-30171535)
[»] chr7 (21 HSPs)
chr7 (89-176)||(1565729-1565816)
chr7 (89-176)||(1738447-1738534)
chr7 (89-176)||(7240792-7240879)
chr7 (89-176)||(9268799-9268886)
chr7 (89-176)||(46840903-46840990)
chr7 (89-179)||(22285742-22285832)
chr7 (89-178)||(31319397-31319486)
chr7 (89-166)||(38063923-38064000)
chr7 (89-176)||(7482268-7482355)
chr7 (89-176)||(23314139-23314226)
chr7 (89-167)||(33418419-33418497)
chr7 (89-167)||(38441503-38441581)
chr7 (89-166)||(36016206-36016283)
chr7 (89-164)||(94330-94405)
chr7 (89-164)||(36583438-36583513)
chr7 (92-167)||(4790294-4790369)
chr7 (89-176)||(28536751-28536838)
chr7 (94-167)||(40840128-40840201)
chr7 (97-176)||(9575460-9575539)
chr7 (105-167)||(7269414-7269476)
chr7 (117-166)||(7661147-7661196)
[»] chr1 (36 HSPs)
chr1 (89-176)||(14984880-14984967)
chr1 (89-176)||(27159358-27159445)
chr1 (89-176)||(31842795-31842882)
chr1 (89-176)||(39401966-39402053)
chr1 (89-176)||(44668093-44668180)
chr1 (89-167)||(9981690-9981768)
chr1 (89-176)||(11795976-11796063)
chr1 (89-176)||(25694362-25694449)
chr1 (89-176)||(26471065-26471152)
chr1 (89-176)||(47216699-47216786)
chr1 (89-176)||(47777481-47777568)
chr1 (89-167)||(44955215-44955293)
chr1 (92-176)||(34042742-34042826)
chr1 (89-176)||(1050931-1051018)
chr1 (89-176)||(47588337-47588424)
chr1 (89-176)||(12483628-12483715)
chr1 (94-176)||(17556801-17556883)
chr1 (92-156)||(23278021-23278085)
chr1 (89-176)||(47969738-47969825)
chr1 (98-176)||(11989833-11989911)
chr1 (95-176)||(11897103-11897184)
chr1 (95-167)||(37552190-37552262)
chr1 (95-178)||(16448106-16448189)
chr1 (95-164)||(1598394-1598461)
chr1 (94-166)||(12213484-12213556)
chr1 (120-176)||(16448182-16448238)
chr1 (120-176)||(21537943-21537999)
chr1 (111-161)||(17167768-17167818)
chr1 (95-140)||(571556-571601)
chr1 (111-176)||(5392211-5392276)
chr1 (122-179)||(40676865-40676922)
chr1 (120-176)||(11897054-11897110)
chr1 (122-170)||(12043610-12043658)
chr1 (120-167)||(12062569-12062616)
chr1 (95-167)||(12069535-12069607)
chr1 (120-172)||(45871206-45871258)
[»] scaffold1707 (1 HSPs)
scaffold1707 (89-164)||(1378-1453)
[»] scaffold0482 (1 HSPs)
scaffold0482 (89-176)||(12903-12990)
[»] scaffold0204 (1 HSPs)
scaffold0204 (89-176)||(23828-23915)
[»] scaffold0009 (1 HSPs)
scaffold0009 (89-176)||(49548-49635)
[»] scaffold0464 (1 HSPs)
scaffold0464 (89-176)||(6131-6218)
[»] scaffold0650 (1 HSPs)
scaffold0650 (95-160)||(1-66)
[»] scaffold0011 (1 HSPs)
scaffold0011 (95-176)||(231303-231384)


Alignment Details
Target: chr5 (Bit Score: 101; Significance: 9e-50; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 368 - 569
Target Start/End: Original strand, 30856012 - 30856205
Alignment:
Q  368 tttcttcaacttttaatccttctannnnnnnngtcatcgctcttgtgtcccgccgttatgtccatacaaatgtgtttaacaaatgtcgaagtggccagta 467  Q
    ||||||||||||||||||||||||        ||||||||| ||| ||||||||||||| |||||||||||||||||||| ||| || ||||| |||||     
T  30856012 tttcttcaacttttaatccttctattttttttgtcatcgcttttgagtcccgccgttatatccatacaaatgtgtttaacgaatatcaaagtgaccagtc 30856111  T
Q  468 ttatggacgtttttctttaattacattgaactttctaaataccaaaaatatttattaaataaattataacgaataagttttagcaaattagaactttaat 567  Q
    || |||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||| ||| ||||||||||||||||||||||||||    
T  30856112 ttgtggacgtttttctttaattacattgaactttctaaacaccaaaaatatttatta--------ataatgaaaaagttttagcaaattagaactttaat 30856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 237 - 391
Target Start/End: Original strand, 30855857 - 30856010
Alignment:
Q  237 cattattattttttagacttgaaaaatatcattttcagttggcnnnnnnnaaaatnnnnnnnnttcaacatgtgtttttcatccgtatctgtatgaaatt 336  Q
    ||||| |||||||||||||||||||||||||||||||||||||       |||||        |||||| ||||||||||||||||||| ||||||||||    
T  30855857 cattactattttttagacttgaaaaatatcattttcagttggctttttttaaaataaaaaaaattcaacgtgtgtttttcatccgtatccgtatgaaatt 30855956  T
Q  337 aacaaattttgttttcattccttacaaaaaatttcttcaacttttaatccttcta 391  Q
    ||||||||||||||| |||||||||||||||  | ||||||||||||||||||||    
T  30855957 aacaaattttgtttttattccttacaaaaaaaat-ttcaacttttaatccttcta 30856010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 9395393 - 9395480
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  9395393 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 36563625 - 36563538
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  36563625 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 37149042 - 37148955
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  37149042 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 41989494 - 41989407
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  41989494 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 23359985 - 23360063
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  23359985 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 23360063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 11795211 - 11795287
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggac 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  11795211 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 11795287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 13103067 - 13103154
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  13103067 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 26350437 - 26350350
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| || |||||    
T  26350437 aagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattcttttataaataggaccggagggagta 26350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 6126870 - 6126955
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtag 177  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||    
T  6126870 tgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtag 6126955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 13033094 - 13033169
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  13033094 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaatagga 13033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 17025667 - 17025754
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  17025667 aagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 21575989 - 21576076
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||| || |||||    
T  21575989 aagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 37641997 - 37642084
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| || |||||    
T  37641997 aagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 583032 - 583099
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttat 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  583032 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttat 583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 20848117 - 20848203
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||||||||||| || |||||    
T  20848117 aagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-cccaaaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 30855557 - 30855617
Alignment:
Q  173 agtagttactggtataagtttgtaggagtgattgtgcatatctcaaaactgccttataaaa 233  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30855557 agtagttattagtataagtttgtaggagtgattgtgcatatctcaaaactgccttataaaa 30855617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 4444003 - 4444081
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||   |||||||| ||||||||| |||||    
T  4444003 aagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctcttataaataagaccg 4444081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 35904448 - 35904527
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||| ||  |||| | ||||||| ||||||||||||||    
T  35904448 atgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagta 35904527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 9006949 - 9006894
Alignment:
Q  109 aatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaatagga 9006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 2366419 - 2366352
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatag 162  Q
    |||||||||||||||| ||||||| | |||||| |||| |||||||| |||| |||| ||||||||||    
T  2366419 atgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 39290823 - 39290891
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagg 163  Q
    ||||||||||| | ||||||||| ||||||||| |||||||||||| || |  |||| |||||||||||    
T  39290823 atgtatttggattaaatttttaattagatacattaacttttgttgattcgactttctcttataaatagg 39290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 13539944 - 13539909
Alignment:
Q  99 atttggactgaatttttaactagatacatcaacttt 134  Q
    |||| |||||||||||||||||||||||||||||||    
T  13539944 atttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 124
Target Start/End: Complemental strand, 38361778 - 38361743
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagata 124  Q
    ||||||||||||||||||||||||||||| ||||||    
T  38361778 aagtgaatgtatttggactgaatttttaaatagata 38361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 966197 - 966267
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggac 165  Q
    |||||| | ||||||||||||||| ||||||||  | |||||||||  |||| |||| |||||||||||||    
T  966197 atgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctcttataaataggac 966267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 36595856 - 36595783
Alignment:
Q  94 aatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||| | ||||||||||||||  ||||||||||| ||||||||||  ||  |||| ||||||||| |||||    
T  36595856 aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagaccg 36595783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 52756718 - 52756805
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  52756718 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagta 52756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 5986919 - 5987006
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  5986919 aagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 6121980 - 6121893
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  6121980 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 47833654 - 47833741
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  47833654 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 3372164 - 3372253
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||||    
T  3372164 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtagt 3372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 3993019 - 3993106
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| || |||||    
T  3993019 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 20538773 - 20538686
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||    
T  20538773 aagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 33621839 - 33621926
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||    
T  33621839 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 42797775 - 42797862
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  42797775 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 46797768 - 46797855
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  46797768 aagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 47838704 - 47838617
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  47838704 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 48336306 - 48336393
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||    
T  48336306 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 53337413 - 53337500
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| || |||||    
T  53337413 aagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 3422106 - 3422190
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  3422106 tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 3904770 - 3904683
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||    
T  3904770 aagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 24704413 - 24704488
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  24704413 aagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaatagga 24704488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 41469853 - 41469766
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  41469853 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 51894669 - 51894582
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  51894669 aagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 7579353 - 7579431
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  7579353 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccg 7579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 43900592 - 43900670
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  43900592 aagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaataggaccg 43900670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 40913276 - 40913198
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||  |||| |||| |||||||||||||||    
T  40913276 aagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttctcttataaataggaccg 40913198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 33551244 - 33551312
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttata 157  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||| |||||    
T  33551244 aagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaacccaaaattctcttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 41615763 - 41615685
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||||  |||  |||| |||||||||||||||    
T  41615763 aagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggaccg 41615685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 26231624 - 26231668
Alignment:
Q  93 gaatgtatttggactgaatttttaactagatacatcaacttttgt 137  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  26231624 gaatgtatttggactgaatttttaactagatatatcaacttttgt 26231668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 50430499 - 50430431
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagg 163  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||  | | |||||||||||    
T  50430499 atgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaatagg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 17236864 - 17236918
Alignment:
Q  122 atacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||| |||| || | ||||||||||||||| ||||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 4780358 - 4780427
Alignment:
Q  109 aatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    |||||||||  |||||||| |||||||||||||  ||| |||| ||||||||||||||| || |||||||    
T  4780358 aatttttaatcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagtagt 4780427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 25855126 - 25855174
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgt 137  Q
    |||| ||||||||||||||||||||||||| | ||||||| ||||||||    
T  25855126 aagttaatgtatttggactgaatttttaaccaaatacatcgacttttgt 25855174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 45478151 - 45478210
Alignment:
Q  105 actgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    ||||||||||||||  ||||||||||||||| ||||| || | |||| ||||||||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaatagga 45478210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 17344262 - 17344328
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    |||||| || |||||||||||||   ||||||||||||||||||||  |||| |||| |||||||||    
T  17344262 atgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttctcttataaata 17344328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 45725905 - 45725979
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaa 169  Q
    |||||||| |||| |||| ||||||| |||| | |||||||||||||  ||  |||| |||||||||||||||||    
T  45725905 atgtatttagactaaattcttaactaaatacgttaacttttgttgacgaaactttctcttataaataggaccgaa 45725979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 8e-35; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 8437468 - 8437555
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||    
T  8437468 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 19557139 - 19557050
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  19557139 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagt 19557050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 10298022 - 10298109
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  10298022 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 40691083 - 40690996
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  40691083 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 48340440 - 48340527
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  48340440 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 49823468 - 49823381
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  49823468 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 8817473 - 8817395
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  8817473 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 8817395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 17653755 - 17653833
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  17653755 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 17653833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 22721974 - 22722052
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  22721974 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 22722052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 37508964 - 37509042
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  37508964 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 37509042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 34080117 - 34080028
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  34080117 aagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagt 34080028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 2787919 - 2787831
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtag 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| || ||||||    
T  2787919 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtag 2787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 38964435 - 38964522
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  38964435 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 51406716 - 51406803
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||    
T  51406716 aagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 4238637 - 4238715
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  4238637 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccg 4238715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 9111581 - 9111503
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9111581 aagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 9111503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 42507442 - 42507364
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  42507442 aagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 42507364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 44785483 - 44785405
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  44785483 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccg 44785405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 21295413 - 21295326
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  21295413 aagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 46208073 - 46208160
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  46208073 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 42170433 - 42170356
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggacc 166  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  42170433 aagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 6013423 - 6013336
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||| ||||||||||||||| || |||||    
T  6013423 aagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 36095767 - 36095680
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| || |||||| ||||| || |||||    
T  36095767 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttgtaaataagaccggagtgagta 36095680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 33943019 - 33942944
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  33943019 aagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 35513516 - 35513605
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||  || |||||| |||||||||||| || || |||||||    
T  35513516 aagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccagaattcttttataaataggatcggagggagtagt 35513605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 34988140 - 34988205
Alignment:
Q  111 tttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||| |||||||||||||  | | ||||||||||||||| || |||||    
T  34988140 tttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 9213572 - 9213516
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||| |||  ||| ||||||||||||||| || |||||    
T  9213572 agatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 8951983 - 8951943
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatca 129  Q
    |||| ||||||||||||||||||||||||| | ||||||||    
T  8951983 aagttaatgtatttggactgaatttttaacaaaatacatca 8951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 34988131 - 34988075
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||| |||||||||||||||| ||||  ||| | |||||||||||||||| |||||    
T  34988131 agatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagta 34988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 45652128 - 45652080
Alignment:
Q  117 actagatacatcaacttttgttgactcaaaattctgttataaataggac 165  Q
    |||||||||||| | |||||||||||||||  ||| |||||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggac 45652080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 2830378 - 2830467
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  2830378 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagt 2830467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 8383056 - 8382967
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  8383056 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagt 8382967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 6068609 - 6068696
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||    
T  6068609 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 6330158 - 6330245
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  6330158 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 8417880 - 8417793
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  8417880 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 11572232 - 11572145
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  11572232 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 13853680 - 13853593
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  13853680 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 26602366 - 26602453
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  26602366 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 9644742 - 9644832
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagttact 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||| |||||    
T  9644742 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttact 9644832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 9650759 - 9650849
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagttact 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||| |||||    
T  9650759 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttact 9650849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 8099573 - 8099660
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  8099573 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 28747221 - 28747134
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||| |||||    
T  28747221 aagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagta 28747134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 33052881 - 33052803
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  33052881 aagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccg 33052803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 35031088 - 35031010
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  35031088 aagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccg 35031010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 17992031 - 17992118
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| |||||||||||||||||| |||||    
T  17992031 aagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 6143597 - 6143675
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  6143597 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaattctcttataaatagaaccg 6143675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 22896513 - 22896583
Alignment:
Q  97 gtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  22896513 gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggaccg 22896583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 7597048 - 7596989
Alignment:
Q  105 actgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||  |||||||||||    
T  7597048 actgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaatagga 7596989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 13043804 - 13043850
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgtt 138  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||    
T  13043804 tgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 3788093 - 3788167
Alignment:
Q  102 tggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||| ||||||| ||||||||||||||||||||  ||| || | ||||||||| ||||| || |||||    
T  3788093 tggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 33393213 - 33393165
Alignment:
Q  109 aatttttaactagatacatcaacttttgttgactcaaaattctgttata 157  Q
    |||||| |||||||||||||||||||| |||||||||| |||| |||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 8186441 - 8186488
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||  |||| |||| |||||||||||||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccg 8186488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 6069027 - 6068975
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgac 141  Q
    |||| ||||||||||| || ||||||||||| ||||| ||| |||||||||||    
T  6069027 aagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgac 6068975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 13197797 - 13197708
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  13197797 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagt 13197708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 3055601 - 3055688
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  3055601 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 9047842 - 9047755
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  9047842 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 15896885 - 15896972
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  15896885 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 37990100 - 37990013
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  37990100 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 38917609 - 38917522
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  38917609 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 41478726 - 41478639
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  41478726 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 44398729 - 44398816
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  44398729 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 16243870 - 16243792
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  16243870 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 16243792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 44397590 - 44397668
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  44397590 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 44397668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 6648603 - 6648519
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  6648603 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 12338021 - 12337937
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  12338021 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 15372269 - 15372356
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  15372269 aagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 13344530 - 13344614
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| || |||||    
T  13344530 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 16044404 - 16044317
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| || |||||    
T  16044404 aagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 37666697 - 37666610
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| || |||||    
T  37666697 aagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 41492983 - 41492896
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| || |||||    
T  41492983 aagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 44804662 - 44804587
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  44804662 tgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccg 44804587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 30099266 - 30099182
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||||| || |||||    
T  30099266 tgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 4684019 - 4683971
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4684019 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgt 4683971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 12170486 - 12170414
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||| |||||||||    
T  12170486 aagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttctcttataaata 12170414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 16734832 - 16734902
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggac 165  Q
    |||||| ||||||||||||||||| | ||||||||||||||||| ||||||  |||| |||||||||||||    
T  16734832 atgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaataggac 16734902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 41453102 - 41453149
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttg 136  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||    
T  41453102 aagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 11582713 - 11582647
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    |||||||||| |  |||||| |||||||| |||||||||||||||||||||||  || |||||||||    
T  11582713 atgtatttggtccaaattttgaactagattcatcaacttttgttgactcaaaacccttttataaata 11582647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 15244034 - 15243990
Alignment:
Q  117 actagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||    
T  15244034 actagatacatcaacttttgttgattcaaatatctcttataaata 15243990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 44425028 - 44425084
Alignment:
Q  109 aatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggac 165  Q
    |||||| |||||||||||| |||||||||||| |||||  ||| |||| ||||||||    
T  44425028 aattttgaactagatacataaacttttgttgattcaaatatctcttattaataggac 44425084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 54699 - 54612
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  54699 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 2890249 - 2890162
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  2890249 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 6552698 - 6552785
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  6552698 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 7785865 - 7785778
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  7785865 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 33289348 - 33289261
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  33289348 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 39571290 - 39571203
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  39571290 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 31654656 - 31654734
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  31654656 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccg 31654734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 3304365 - 3304276
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||||    
T  3304365 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtagt 3304276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 7805786 - 7805699
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| || |||||    
T  7805786 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 12763741 - 12763654
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||    
T  12763741 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 25601087 - 25601000
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  25601087 aagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 43199441 - 43199354
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||    
T  43199441 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 44498274 - 44498187
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| || |||||    
T  44498274 aagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 12343227 - 12343149
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  12343227 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccg 12343149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 32211447 - 32211363
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||    
T  32211447 tgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 32114562 - 32114475
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||||||| || |||||    
T  32114562 aagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 7012214 - 7012292
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  7012214 aagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccg 7012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 15888439 - 15888366
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatag 162  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15888439 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatag 15888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 13578900 - 13578972
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13578900 aagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 27422239 - 27422320
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||| |||| |||| |||||||||||||||||| |||||    
T  27422239 atgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 8587219 - 8587291
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||  |||| ||||||||| |||||    
T  8587219 atgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttctcttataaataagaccg 8587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  109 aatttttaactagatacatcaacttttgttgactcaaaattctgttataaat 160  Q
    |||||| ||||||||||||||| |||||||||||||||| ||| ||||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 28463660 - 28463729
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    |||||||||||||||||||| ||| ||||| ||||||||| | |||| ||| ||||||  ||||||||||    
T  28463660 atgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatattctgcaataaatagga 28463729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 24692059 - 24691988
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||| || |||||||||| ||| ||||| |||||||||||||||| |||| |||| ||| |||||||||||    
T  24692059 atgtatctgaactgaatttt-aaccagatatatcaacttttgttgacccaaatttcttttaaaaataggaccg 24691988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 17006967 - 17007026
Alignment:
Q  102 tggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    ||||||||||| ||||  |||||||||||||||| |||||| ||| |||| |||||||||    
T  17006967 tggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 17570280 - 17570221
Alignment:
Q  102 tggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    ||||||||||| ||||  |||||||||||||||| |||||| ||| |||| |||||||||    
T  17570280 tggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 28463665 - 28463620
Alignment:
Q  122 atacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||| |||  |||| |||||||||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccg 28463620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 30171535 - 30171494
Alignment:
Q  123 tacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    ||||| ||||||||||||||||||||||| || |||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaatagga 30171494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 1565816 - 1565729
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |||||    
T  1565816 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagta 1565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 1738534 - 1738447
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  1738534 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 7240792 - 7240879
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  7240792 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 9268799 - 9268886
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  9268799 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 46840903 - 46840990
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  46840903 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 22285742 - 22285832
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagtt 179  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||||    
T  22285742 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagtt 22285832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 31319486 - 31319397
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| || |||||||    
T  31319486 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtagt 31319397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 38064000 - 38063923
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggacc 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  38064000 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 38063923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 7482268 - 7482355
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  7482268 aagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 23314226 - 23314139
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  23314226 aagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 33418419 - 33418497
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  33418419 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccg 33418497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 38441503 - 38441581
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  38441503 aagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 38441581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 36016283 - 36016206
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggacc 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  36016283 aagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 94405 - 94330
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  94405 aagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 94330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 36583438 - 36583513
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  36583438 aagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 36583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 4790294 - 4790369
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  4790294 tgaatgtatttggactaaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccg 4790369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 28536838 - 28536751
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||| || |||||    
T  28536838 aagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 28536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 40840201 - 40840128
Alignment:
Q  94 aatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  ||| |||| |||||||||||||||    
T  40840201 aatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttctcttataaataggaccg 40840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 9575460 - 9575539
Alignment:
Q  97 gtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||  ||  |||| |||||||||||||||||| |||||    
T  9575460 gtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 7269476 - 7269414
Alignment:
Q  105 actgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||| |||| |||||||||||||| || |||  |||| |||||||||||||||    
T  7269476 actgaatttttaaccagatgcatcaacttttgttaacccaactttctcttataaataggaccg 7269414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 7661147 - 7661196
Alignment:
Q  117 actagatacatcaacttttgttgactcaaaattctgttataaataggacc 166  Q
    ||||||||||||||||||||||||| ||||  |||  |||||||||||||    
T  7661147 actagatacatcaacttttgttgacccaaatgtctcatataaataggacc 7661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 14984880 - 14984967
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  14984880 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 27159445 - 27159358
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  27159445 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 31842882 - 31842795
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  31842882 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 39402053 - 39401966
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  39402053 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 44668180 - 44668093
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  44668180 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 9981690 - 9981768
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9981690 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccg 9981768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 11795976 - 11796063
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  11795976 aagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 25694362 - 25694449
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  25694362 aagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 26471152 - 26471065
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| || |||||    
T  26471152 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 47216786 - 47216699
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| || |||||    
T  47216786 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 47777568 - 47777481
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  47777568 aagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 44955293 - 44955215
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  44955293 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccg 44955215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 34042742 - 34042826
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| || |||||    
T  34042742 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 1050931 - 1051018
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| || |||||    
T  1050931 aagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 47588424 - 47588337
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||  ||||||| |||||    
T  47588424 aagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataaaaccgaagggagta 47588337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 12483715 - 12483628
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  12483715 aagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 17556801 - 17556883
Alignment:
Q  94 aatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||||| || |||||    
T  17556801 aatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 23278085 - 23278021
Alignment:
Q  92 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttat 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  23278085 tgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 47969738 - 47969825
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||| || |||||    
T  47969738 aagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatccaaaattattttataaataggaccggagggagta 47969825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 11989833 - 11989911
Alignment:
Q  98 tatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||| | ||||||||| |||| |||||||||| |||| ||||||||||||||| || |||||    
T  11989833 tatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 11897103 - 11897184
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||| || ||||||||||||||  ||||||||||||||||||||| |||| |||| ||||||||||||||| || |||||    
T  11897103 atgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 37552190 - 37552262
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||| ||||||||||||||||| ||||||||  | |||||||||| |||| |||| |||||||||||||||    
T  37552190 atgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccg 37552262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 16448189 - 16448106
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagt 178  Q
    |||||| ||||||||||||| ||| |||||||| ||||||||||||| ||| ||||   |||||||| ||||| || |||||||    
T  16448189 atgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcccctataaataagaccggagtgagtagt 16448106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 1598461 - 1598394
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||| || | |||| ||||||||||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttgac-catatttctcttataaatagga 1598394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 12213556 - 12213484
Alignment:
Q  94 aatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggacc 166  Q
    ||||||||| || |||||||||||||| ||| ||||| |||||||||| |||  |||| | ||||||||||||    
T  12213556 aatgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttctctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 16448182 - 16448238
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||| || |||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 21537943 - 21537999
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||  |||| ||||||||| || || ||||||||    
T  21537943 agatacatcaacttttgttgactcaattttctcttataaataagatcggagagagta 21537999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 17167768 - 17167818
Alignment:
Q  111 tttttaactagatacatcaacttttgttgactcaaaattctgttataaata 161  Q
    ||||||| ||||||||| |||||||||||||||||| |||| || ||||||    
T  17167768 tttttaattagatacattaacttttgttgactcaaatttcttttgtaaata 17167818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 571556 - 571601
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttga 140  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||||||    
T  571556 atgtatttagactgaattttgaactaggtacattaacttttgttga 571601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 5392211 - 5392276
Alignment:
Q  111 tttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||| | |||||||||||||| |||||  ||| |||| ||||| || |||||||||||||||    
T  5392211 tttttaaccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagta 5392276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 40676865 - 40676922
Alignment:
Q  122 atacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagtagtt 179  Q
    |||||| |||||||||||||| ||| || |||||||||||||| ||||  ||||||||    
T  40676865 atacattaacttttgttgactgaaatttttgttataaataggatcgaatggagtagtt 40676922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 11897110 - 11897054
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||  ||  |||| ||||||||||||||| || |||||    
T  11897110 agatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 12043658 - 12043610
Alignment:
Q  122 atacatcaacttttgttgactcaaaattctgttataaataggaccgaag 170  Q
    ||||||||||||||||||||| |||  ||| |||||||||||| |||||    
T  12043658 atacatcaacttttgttgacttaaatatcttttataaataggatcgaag 12043610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 12062616 - 12062569
Alignment:
Q  120 agatacatcaacttttgttgactcaaaat-tctgttataaataggaccg 167  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  12062616 agatacatcaacttttgttga-tcaaaatatcttttataaataggaccg 12062569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 12069535 - 12069607
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccg 167  Q
    |||||||| |||||||||||||||  |||| |||||||||| |  ||||||  |||| ||||||||| |||||    
T  12069535 atgtatttagactgaatttttaacctgataaatcaacttttatcaactcaattttctcttataaataagaccg 12069607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 45871258 - 45871206
Alignment:
Q  120 agatacatcaacttttgttgactcaaaattctgttataaataggaccgaagag 172  Q
    ||||| |||||||| ||||||||||||  ||| |||||||||||| |||||||    
T  45871258 agatatatcaacttctgttgactcaaacatctcttataaataggatcgaagag 45871206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 1378 - 1453
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaatagga 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  1378 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 12903 - 12990
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| || |||||    
T  12903 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 23828 - 23915
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||    
T  23828 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 49548 - 49635
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  49548 aagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 6218 - 6131
Alignment:
Q  89 aagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| || |||||    
T  6218 aagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 66 - 1
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaat 160  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| |  |||| ||||||||    
T  66 atgtatttggactaaatttttaaccaaatacatcaacttttgttgactcgactttctcttataaat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 231384 - 231303
Alignment:
Q  95 atgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctgttataaataggaccgaagagagta 176  Q
    |||||| ||||||||||||| |||||| || ||||||||||||||||  || |||||  |||||||||||||| || |||||    
T  231384 atgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattctcctataaataggaccggagggagta 231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University