View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1308-Insertion-8 (Length: 59)
Name: NF1308-Insertion-8
Description: NF1308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1308-Insertion-8 |
 |  |
|
| [»] chr7 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 44; Significance: 7e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-17
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 3149272 - 3149221
Alignment:
| Q |
8 |
attaatactttaggcctgacctttgagagactttcactacttcatgagttaa |
59 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3149272 |
attaatacttttggcctgacctttgagagactttcactactccatgagttaa |
3149221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University