View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13080_high_1 (Length: 726)

Name: NF13080_high_1
Description: NF13080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13080_high_1
NF13080_high_1
[»] chr1 (46 HSPs)
chr1 (46-206)||(16531340-16531500)
chr1 (205-528)||(38505953-38506269)
chr1 (67-203)||(41803141-41803277)
chr1 (67-206)||(18974224-18974363)
chr1 (67-206)||(46142607-46142746)
chr1 (76-206)||(14172919-14173049)
chr1 (67-206)||(35525349-35525488)
chr1 (67-202)||(42570944-42571079)
chr1 (104-206)||(12790472-12790574)
chr1 (104-206)||(38044413-38044515)
chr1 (105-206)||(40532605-40532706)
chr1 (94-206)||(49925581-49925693)
chr1 (67-206)||(13973839-13973978)
chr1 (67-206)||(29761322-29761461)
chr1 (67-206)||(6436627-6436766)
chr1 (111-206)||(15356013-15356108)
chr1 (67-206)||(27485875-27486014)
chr1 (111-206)||(49260906-49261001)
chr1 (97-206)||(37779036-37779145)
chr1 (79-206)||(36910795-36910922)
chr1 (104-206)||(17685548-17685650)
chr1 (112-206)||(24269598-24269692)
chr1 (104-206)||(39856452-39856554)
chr1 (111-206)||(35586119-35586214)
chr1 (111-206)||(49397559-49397654)
chr1 (67-198)||(51270732-51270866)
chr1 (111-206)||(35185888-35185983)
chr1 (127-206)||(29436863-29436942)
chr1 (104-206)||(17373386-17373491)
chr1 (46-145)||(17373477-17373568)
chr1 (76-206)||(22528404-22528521)
chr1 (66-145)||(35586047-35586126)
chr1 (66-145)||(38044348-38044427)
chr1 (66-145)||(39856387-39856466)
chr1 (67-206)||(48227438-48227564)
chr1 (67-145)||(13284430-13284508)
chr1 (142-191)||(24363358-24363407)
chr1 (67-144)||(49428315-49428392)
chr1 (66-145)||(35185976-35186055)
chr1 (66-145)||(49260834-49260913)
chr1 (63-145)||(15355938-15356020)
chr1 (66-145)||(12790407-12790486)
chr1 (66-145)||(17685483-17685562)
chr1 (68-127)||(26494452-26494511)
chr1 (91-144)||(14771984-14772037)
chr1 (58-127)||(31451621-31451690)
[»] chr3 (47 HSPs)
chr3 (46-206)||(27187980-27188142)
chr3 (67-206)||(7246965-7247104)
chr3 (67-206)||(13895058-13895197)
chr3 (104-206)||(44928367-44928469)
chr3 (66-206)||(30193459-30193599)
chr3 (67-206)||(41578832-41578971)
chr3 (79-206)||(51695126-51695253)
chr3 (104-206)||(51012496-51012598)
chr3 (67-199)||(55268233-55268365)
chr3 (67-206)||(2429391-2429530)
chr3 (108-206)||(14632364-14632462)
chr3 (76-206)||(49611072-49611202)
chr3 (104-205)||(11378189-11378290)
chr3 (97-206)||(46413502-46413611)
chr3 (105-206)||(51016183-51016284)
chr3 (67-206)||(43570789-43570928)
chr3 (67-206)||(45099626-45099765)
chr3 (67-206)||(46345763-46345902)
chr3 (67-206)||(49217904-49218043)
chr3 (104-202)||(42322601-42322699)
chr3 (76-206)||(52568605-52568735)
chr3 (67-191)||(20375138-20375275)
chr3 (111-206)||(10052581-10052676)
chr3 (105-204)||(34646414-34646513)
chr3 (67-206)||(43477944-43478083)
chr3 (112-206)||(34471287-34471381)
chr3 (111-206)||(34692502-34692597)
chr3 (66-206)||(49274331-49274482)
chr3 (210-392)||(12821512-12821692)
chr3 (210-392)||(12827154-12827334)
chr3 (97-181)||(50458459-50458543)
chr3 (112-171)||(55206141-55206200)
chr3 (67-144)||(24701453-24701530)
chr3 (142-191)||(25886953-25887002)
chr3 (142-191)||(25887836-25887885)
chr3 (151-191)||(25887896-25887936)
chr3 (66-145)||(44928455-44928534)
chr3 (66-145)||(51012431-51012510)
chr3 (46-99)||(27096843-27096896)
chr3 (69-145)||(10052512-10052588)
chr3 (66-145)||(11378124-11378203)
chr3 (457-517)||(12821392-12821452)
chr3 (457-517)||(12827034-12827094)
chr3 (155-191)||(25886915-25886951)
chr3 (66-145)||(46413444-46413523)
chr3 (66-145)||(51016271-51016350)
chr3 (205-263)||(43808782-43808840)
[»] chr2 (26 HSPs)
chr2 (57-206)||(33404641-33404791)
chr2 (67-206)||(40676574-40676713)
chr2 (106-205)||(5421037-5421136)
chr2 (67-206)||(16582719-16582858)
chr2 (202-528)||(16965138-16965463)
chr2 (76-206)||(19470786-19470916)
chr2 (67-206)||(23408630-23408769)
chr2 (111-206)||(24107994-24108089)
chr2 (76-206)||(2918530-2918660)
chr2 (107-199)||(37311861-37311953)
chr2 (67-206)||(43492368-43492508)
chr2 (111-206)||(35492484-35492579)
chr2 (104-206)||(6977720-6977822)
chr2 (111-206)||(17538140-17538235)
chr2 (111-206)||(34520953-34521048)
chr2 (67-184)||(41498274-41498391)
chr2 (111-206)||(3942311-3942406)
chr2 (66-145)||(17538068-17538147)
chr2 (66-145)||(24107922-24108001)
chr2 (66-145)||(37311793-37311872)
chr2 (67-145)||(5421124-5421202)
chr2 (151-191)||(18879643-18879683)
chr2 (66-145)||(34520881-34520960)
chr2 (83-145)||(15891132-15891194)
chr2 (205-263)||(41579250-41579308)
chr2 (204-261)||(28000669-28000726)
[»] chr8 (17 HSPs)
chr8 (65-206)||(40703265-40703406)
chr8 (76-206)||(42604355-42604485)
chr8 (67-206)||(18439455-18439594)
chr8 (67-206)||(41856154-41856293)
chr8 (67-206)||(44051347-44051486)
chr8 (67-206)||(22549981-22550120)
chr8 (67-206)||(24862250-24862389)
chr8 (107-206)||(26487355-26487454)
chr8 (67-206)||(41275974-41276113)
chr8 (111-206)||(28167707-28167802)
chr8 (111-199)||(42168166-42168254)
chr8 (111-206)||(38033122-38033217)
chr8 (106-197)||(19241862-19241953)
chr8 (106-197)||(19315046-19315137)
chr8 (66-145)||(26487443-26487522)
chr8 (66-145)||(38033050-38033129)
chr8 (66-145)||(42168094-42168173)
[»] chr4 (45 HSPs)
chr4 (76-206)||(49422919-49423049)
chr4 (67-206)||(44559481-44559620)
chr4 (67-203)||(6281679-6281815)
chr4 (106-206)||(49791138-49791238)
chr4 (67-206)||(1043646-1043785)
chr4 (105-206)||(2773919-2774020)
chr4 (67-206)||(956608-956747)
chr4 (67-206)||(34528963-34529102)
chr4 (67-206)||(37867364-37867503)
chr4 (67-206)||(51427355-51427494)
chr4 (67-206)||(56139807-56139946)
chr4 (112-206)||(21170365-21170459)
chr4 (104-206)||(47870966-47871068)
chr4 (105-206)||(10315353-10315453)
chr4 (67-204)||(49572016-49572153)
chr4 (104-204)||(4784571-4784671)
chr4 (67-206)||(9490379-9490518)
chr4 (112-206)||(36775717-36775811)
chr4 (46-142)||(10315443-10315540)
chr4 (67-206)||(39589684-39589823)
chr4 (46-190)||(21411130-21411287)
chr4 (284-496)||(16036241-16036453)
chr4 (106-206)||(43888708-43888808)
chr4 (46-145)||(21412216-21412315)
chr4 (106-199)||(17054647-17054740)
chr4 (58-145)||(9718217-9718304)
chr4 (67-206)||(34152440-34152579)
chr4 (88-206)||(42887185-42887303)
chr4 (104-198)||(49816641-49816740)
chr4 (111-206)||(51027017-51027112)
chr4 (125-206)||(22437795-22437876)
chr4 (112-206)||(45940428-45940522)
chr4 (90-145)||(4784529-4784585)
chr4 (142-191)||(9718131-9718180)
chr4 (68-145)||(49816578-49816655)
chr4 (66-145)||(2774007-2774086)
chr4 (111-206)||(25763483-25763577)
chr4 (164-206)||(28083134-28083176)
chr4 (246-343)||(19514485-19514582)
chr4 (154-190)||(21412158-21412194)
chr4 (66-145)||(21170453-21170532)
chr4 (66-145)||(43888641-43888720)
chr4 (66-145)||(47871054-47871133)
chr4 (66-145)||(49791071-49791150)
chr4 (66-145)||(51026945-51027024)
[»] chr5 (22 HSPs)
chr5 (66-206)||(4723232-4723372)
chr5 (66-206)||(18309173-18309313)
chr5 (67-206)||(3602257-3602396)
chr5 (67-206)||(34683084-34683223)
chr5 (104-206)||(1695699-1695801)
chr5 (111-206)||(1972276-1972371)
chr5 (111-206)||(6792675-6792770)
chr5 (67-201)||(35566189-35566323)
chr5 (67-206)||(25498995-25499133)
chr5 (106-206)||(36349531-36349631)
chr5 (67-206)||(20196990-20197129)
chr5 (76-206)||(1399467-1399598)
chr5 (104-199)||(7484701-7484800)
chr5 (66-145)||(1695787-1695866)
chr5 (66-145)||(6792603-6792682)
chr5 (68-132)||(35927236-35927300)
chr5 (66-145)||(1972364-1972443)
chr5 (66-145)||(7484636-7484715)
chr5 (67-206)||(8538783-8538909)
chr5 (67-144)||(11347656-11347733)
chr5 (154-191)||(35927354-35927391)
chr5 (246-343)||(24118476-24118573)
[»] chr7 (29 HSPs)
chr7 (67-206)||(21186450-21186589)
chr7 (79-206)||(41622995-41623122)
chr7 (67-206)||(42683317-42683456)
chr7 (67-206)||(46861350-46861489)
chr7 (104-204)||(28113592-28113692)
chr7 (105-204)||(15900636-15900735)
chr7 (67-206)||(36392976-36393115)
chr7 (76-206)||(34141765-34141895)
chr7 (111-206)||(10224983-10225078)
chr7 (67-206)||(30353997-30354136)
chr7 (111-206)||(42735878-42735973)
chr7 (104-206)||(22291745-22291847)
chr7 (67-205)||(48271566-48271704)
chr7 (114-206)||(43350605-43350697)
chr7 (107-206)||(20877253-20877352)
chr7 (79-206)||(45362450-45362577)
chr7 (104-206)||(17184099-17184201)
chr7 (67-205)||(28978388-28978526)
chr7 (67-206)||(40589436-40589575)
chr7 (46-191)||(1641830-1641988)
chr7 (67-206)||(48193890-48194029)
chr7 (46-142)||(4230437-4230533)
chr7 (85-145)||(15900588-15900649)
chr7 (210-315)||(39266804-39266908)
chr7 (66-145)||(17184187-17184266)
chr7 (66-145)||(20877185-20877264)
chr7 (66-145)||(42735966-42736045)
chr7 (66-145)||(22291833-22291912)
chr7 (154-206)||(15337349-15337398)
[»] chr6 (24 HSPs)
chr6 (67-206)||(13617055-13617194)
chr6 (46-159)||(14123652-14123767)
chr6 (67-206)||(34802340-34802479)
chr6 (76-206)||(13403724-13403854)
chr6 (67-206)||(32026779-32026918)
chr6 (67-206)||(32036838-32036977)
chr6 (67-206)||(29067398-29067538)
chr6 (104-206)||(12397695-12397797)
chr6 (67-206)||(35020410-35020548)
chr6 (205-318)||(34704051-34704164)
chr6 (67-206)||(29108985-29109127)
chr6 (151-204)||(4495857-4495910)
chr6 (154-206)||(7821491-7821543)
chr6 (142-204)||(4495803-4495865)
chr6 (464-528)||(34704302-34704366)
chr6 (204-278)||(18332527-18332601)
chr6 (151-200)||(4495947-4495996)
chr6 (142-191)||(4495902-4495951)
chr6 (58-131)||(20241512-20241585)
chr6 (104-145)||(20241612-20241653)
chr6 (58-131)||(22135496-22135569)
chr6 (104-145)||(22135596-22135637)
chr6 (58-131)||(22142849-22142922)
chr6 (104-145)||(22142949-22142990)
[»] scaffold0176 (1 HSPs)
scaffold0176 (76-206)||(2690-2820)
[»] scaffold0192 (1 HSPs)
scaffold0192 (67-206)||(17111-17251)
[»] scaffold0618 (1 HSPs)
scaffold0618 (67-206)||(4720-4859)
[»] scaffold0589 (2 HSPs)
scaffold0589 (111-206)||(5189-5284)
scaffold0589 (66-145)||(5277-5356)
[»] scaffold0199 (1 HSPs)
scaffold0199 (155-206)||(11019-11070)
[»] scaffold0859 (1 HSPs)
scaffold0859 (46-100)||(1340-1394)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 6e-76; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 46 - 206
Target Start/End: Original strand, 16531340 - 16531500
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  16531340 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaacgtgttttgaataatttcgattaaagtcgcattttgaataatt 16531439  T
Q  146 gtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16531440 gcatgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 16531500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 205 - 528
Target Start/End: Original strand, 38505953 - 38506269
Alignment:
Q  205 atcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaa 304  Q
    |||| |||||||||||||||||||| | |||||| ||||  |||||| ||||||||||| | |||  ||||||||||||||||||||| ||||||| |||    
T  38505953 atcccttattctaaatgcttattaggtcatgctaccacttaacctaaattttccctctaataatcttgcattaattgttattagtcacttaaccctccaa 38506052  T
Q  305 attttccctccactaatatgcctcttttgaaattgaaattgtttattgttttgtttccttgattttctgcttgcaaatagaaaacgtgggttgcatttac 404  Q
     ||||||||||| || ||||||| |||||||||| ||| ||  ||||| ||||||||| ||||||| |||||| |||||||||| |||   || |  |      
T  38506053 tttttccctccattattatgcctgttttgaaattcaaa-tgactattg-tttgtttccctgattttttgcttgaaaatagaaaatgtgatatgtacgtgg 38506150  T
Q  405 tcatttttgtgctatttaattggacctttctcataccccatgcaaaatgaatcagcatcccacttctccatattgtttctgtttccaacacaaccattat 504  Q
    ||||||      ||||||||  |||||||  || | || ||||| ||| ||| |||  |||||||||||||||||||||||||||||| ||| || ||||    
T  38506151 tcattt-----gtatttaatatgaccttttccaaatcctatgcagaattaataagctacccacttctccatattgtttctgtttccaatacatcccttat 38506245  T
Q  505 accttcacttatgaactatgtata 528  Q
    ||||||| ||||||||||| ||||    
T  38506246 accttcaattatgaactatatata 38506269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 41803277 - 41803141
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||||||| ||||||||  || |||  ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  41803277 acattttgtttgacattatggtgcttagaataaaatcgcatttaaaataatttcgattaaagtcgcgttttgaataattgtgtattcgaataaaaactaa 41803178  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||| | |||||||||||||||    
T  41803177 ttaaatctaacgtgaattcaactaattaaaattgcgt 41803141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 18974363 - 18974224
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||   | ||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||    
T  18974363 acattttgtttgacattatggtacttagaataaaatcacatttggaataatttcgattaaagttgcgttttgaataattgtgtattcgaataaaaactaa 18974264  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  18974263 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 18974224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 46142607 - 46142746
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||| | ||||||||||||| || |||||||||| |||||    
T  46142607 acattttgtttgacattatggtacttagaataaaaccgcatttggaataatttcgattaaagtcacgttttgaataattgcgtattcgaataaaaactaa 46142706  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  46142707 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 46142746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 14172919 - 14173049
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||||||||  || ||| ||||||||||||||||||| || ||||||||||||| || |||||||||| ||||||||||||||    
T  14172919 ttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagttgcgttttgaataattgcgtattcgaataaaaactaattaaatcta 14173018  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||||||||    
T  14173019 acgtgaattcaactaattaaaattgcgtaat 14173049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 35525349 - 35525488
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  |||||||| ||||||||| || |||||||||||||||| |||||||||| |||||    
T  35525349 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataattttgattaaagttgcgttttgaataattgtgtattcgaataaaaactaa 35525448  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  35525449 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 35525488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 42570944 - 42571079
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||| |||||||||||||| |||||||||||||||| || ||||||| |||||    
T  42570944 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatatcgattaaagtcgcgttttgaataattgtgtatttgaataaaaactaa 42571043  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcg 202  Q
    ||||||||||||||||||| | ||||||||||||||    
T  42571044 ttaaatctaacgtgaattcaactaattaaaattgcg 42571079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 12790472 - 12790574
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  12790472 gcgttttgaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaacaaattaaaattgcgt 12790571  T
Q  204 aat 206  Q
    |||    
T  12790572 aat 12790574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 38044413 - 38044515
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  38044413 gcgttttgaataatttcaattaaagtcgcattttgaataattgcgtatttgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgt 38044512  T
Q  204 aat 206  Q
    |||    
T  38044513 aat 38044515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 105 - 206
Target Start/End: Original strand, 40532605 - 40532706
Alignment:
Q  105 cgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||| |  |||||||||||||||    
T  40532605 cgttttgaataatttcgattaaagccgcattttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaacgaattaaaattgcgta 40532704  T
Q  205 at 206  Q
    ||    
T  40532705 at 40532706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 49925581 - 49925693
Alignment:
Q  94 gaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataatt 193  Q
    ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||    
T  49925581 gaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaatt 49925680  T
Q  194 aaaattgcgtaat 206  Q
    |||||||||||||    
T  49925681 aaaattgcgtaat 49925693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 13973978 - 13973839
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||| ||||||| | ||| ||||||||  || ||| |||||||||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  13973978 acattttgtttggcattatgctacttagaataaaatcgcatttggaataatttcgattaaagtcgtgttttgaataattgtgtattcgaataaaaactaa 13973879  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  13973878 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 13973839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 29761322 - 29761461
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||| | |||||    
T  29761322 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaatataaactaa 29761421  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  29761422 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 29761461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 6436766 - 6436627
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  |  |||  ||||||||||||||||||||  ||||||||||||| || |||||||||| |||||    
T  6436766 acattttgtttgacattatggtacttagaataaaatcgtatttgaaataatttcgattaaagtcgtgttttgaataattgcgtattcgaataaaaactaa 6436667  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| |||||||| | ||||||||||||||||||    
T  6436666 ttaaatctaatgtgaattcaactaattaaaattgcgtaat 6436627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 15356013 - 15356108
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||| ||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  15356013 gaataatttcgattaaagtcgcgtttcgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 15356108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 27485875 - 27486014
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||||| | |||    
T  27485875 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaaataa 27485974  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | |||||| |||||||||||    
T  27485975 ttaaatctaacgtgaatccaactaattacaattgcgtaat 27486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 49260906 - 49261001
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  49260906 gaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaatgtgaattcaactaattaaaattgcgtaat 49261001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 37779145 - 37779036
Alignment:
Q  97 taaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaa 196  Q
    ||||| || |||||||| | |||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||    
T  37779145 taaaattgtgttttgaaaattttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaa 37779046  T
Q  197 attgcgtaat 206  Q
    |||| |||||    
T  37779045 attgtgtaat 37779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 79 - 206
Target Start/End: Complemental strand, 36910922 - 36910795
Alignment:
Q  79 acattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacg 178  Q
    |||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| || |||||||||| || |||| | ||| |||||||||||||| ||    
T  36910922 acattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttgtgaataattgcgtattcgtacaaaaactaattaaatctatcg 36910823  T
Q  179 tgaattcgaataattaaaattgcgtaat 206  Q
    ||||||| | ||||||||||||||||||    
T  36910822 tgaattcaactaattaaaattgcgtaat 36910795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 17685548 - 17685650
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| || || ||||||| |||||||||||||||| ||||||| | |||||||||||||||    
T  17685548 gcgttttgaataatttcaattaaagccgcgttttgaataattgcgtattagaataaaaactaattaaatctaacatgaattcaactaattaaaattgcgt 17685647  T
Q  204 aat 206  Q
    |||    
T  17685648 aat 17685650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 24269598 - 24269692
Alignment:
Q  112 aataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||  | ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  24269598 aataatttcgattaaagtgacgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 24269692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 39856452 - 39856554
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    |||||||||||||||||||||||||| || ||||||||||||  || |||||||||| |||||||||||||||||||||||  | |||||||||||| ||    
T  39856452 gcgttttgaataatttcgattaaagttgcgttttgaataattaagtattcgaataaaaactaattaaatctaacgtgaatttaactaattaaaattgtgt 39856551  T
Q  204 aat 206  Q
    |||    
T  39856552 aat 39856554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 35586119 - 35586214
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||| ||||| |||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||    
T  35586119 gaataatttcggttaaattcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattacgtaat 35586214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 49397654 - 49397559
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||| | ||||||||||||| || ||||| |||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  49397654 gaataatttcgattaaagtcacgttttgaataattgcgtattcgagtaaaaactaattaaatctaacgtgaattcaactaattaaaattgtgtaat 49397559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 51270866 - 51270732
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaat---aaagac 163  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||   ||| ||    
T  51270866 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaaaaac 51270767  T
Q  164 taattaaatctaacgtgaattcgaataattaaaat 198  Q
    |||||||||||||||||||| | | ||||||||||    
T  51270766 taattaaatctaacgtgaatccaactaattaaaat 51270732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 35185983 - 35185888
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| ||||  |||||||||||| || |||||||||| ||||||||||||||| |||||||| | |||| |||||||||||||    
T  35185983 gaataatttcgattaaattcgcgatttgaataattgcgtattcgaataaaaactaattaaatctaatgtgaattcaactaatgaaaattgcgtaat 35185888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 29436942 - 29436863
Alignment:
Q  127 agtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||  | ||||||||||||||||||    
T  29436942 agtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaatttaactaattaaaattgcgtaat 29436863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 17373491 - 17373386
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaag---------actaattaaatctaacgtgaattcgaataatta 194  Q
    ||||||||||||||||||||||||||||  |||||||||||      ||||| |||||         |||||||||||||||||||||||||||||||||    
T  17373491 gcgttttgaataatttcgattaaagtcgttttttgaataat------ttcgattaaagtcgtgtttaactaattaaatctaacgtgaattcgaataatta 17373398  T
Q  195 aaattgcgtaat 206  Q
    ||||||||||||    
T  17373397 aaattgcgtaat 17373386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 17373568 - 17373477
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataat 144  Q
    ||||||||||| |||||||||||||||||||         |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||    
T  17373568 atatgtcgcgcgcattttgctacattttcct---------ggtgctttgaataaaaatcgtgttttgactaatttcgattaaagtcgcgttttgaataat 17373478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 22528521 - 22528404
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| |||||||| ||| ||| ||||||||| |||||||||||  |||||||||||             ||| ||||||||||||||    
T  22528521 ttgacattatggtacttagaataaaattgcatttggaataattttgattaaagtcgtgttttgaataat-------------aaaaactaattaaatcta 22528435  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||||||||    
T  22528434 acgtgaattcaactaattaaaattgcgtaat 22528404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 35586047 - 35586126
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  || | |||||||||||  |||||||||||||||||| |||||| |||||||| ||||||||    
T  35586047 tacattttgcttgacatattgatactttgaataaatttgcgttttgaataatttcaattaaaatcgcatttggaataatt 35586126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 38044348 - 38044427
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| |||| ||||||||||||    
T  38044348 tacattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcgcgttttgaataatt 38044427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 39856387 - 39856466
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| |||| ||||||||||||    
T  39856387 tacattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcgcgttttgaataatt 39856466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 48227564 - 48227438
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||| ||||||||             |||||| |||||    
T  48227564 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgcgttttgaat-------------aataaaaactaa 48227478  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  48227477 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 48227438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 13284508 - 13284430
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||| || |||||||| || ||||||||||||   ||||||||||||||| |||||||||||| | ||||||||||    
T  13284508 acattttgctagacattatagtactttgaataaaaccccgttttgaataattttgattaaagtcgcgtattgaataatt 13284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 24363358 - 24363407
Alignment:
Q  142 aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    ||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  24363358 aattgcgtattcgaataaagactaattaagtctaacgtgaattcgaataa 24363407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 49428392 - 49428315
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataat 144  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||| |||||||||||    
T  49428392 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgcgttttgaataat 49428315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 35186055 - 35185976
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   || |||||||||||||| |||||| |||||||| ||||||||    
T  35186055 tacattttgcttgacatattggtactttgaataaattcgcattttgaataatttcaattaaaatcgcatttggaataatt 35185976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 49260834 - 49260913
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   ||||||||||||||||| |||||| || ||||| ||||||||    
T  49260834 tacattttgcttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcacatttggaataatt 49260913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 15355938 - 15356020
Alignment:
Q  63 tgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||||||| ||||||||   ||| |||||||||||   ||||||||||||||||| |||||| || ||||| ||||||||    
T  15355938 tgctacattttgcttgacatataggtactttgaataaattcgcgttttgaataatttcaattaaaatcacatttggaataatt 15356020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 12790407 - 12790486
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||| ||| ||||||||  |||| |||||||||||   | ||||||||||||||| |||||| |||| ||||||||||||    
T  12790407 tacaatttgcttgacatattggtactttgaataaattcgtgttttgaataatttcaattaaaatcgcgttttgaataatt 12790486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 17685483 - 17685562
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| || |||||  |||| |||||||||||   ||||||||||||||||| |||| | |||| ||||||||||||    
T  17685483 tacattttgctagacatattggtactttgaataaattcgcgttttgaataatttcaattagaatcgcgttttgaataatt 17685562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 26494511 - 26494452
Alignment:
Q  68 cattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaa 127  Q
    |||||| |||||||||||||| ||| ||||||||  || ||| |||||||||||||||||    
T  26494511 cattttgcttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaa 26494452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 14771984 - 14772037
Alignment:
Q  91 tttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataat 144  Q
    ||||||||||  ||||| |||||||||||||||||||||||  | |||||||||    
T  14771984 tttgaataaagttgcgtattgaataatttcgattaaagtcgtgtattgaataat 14772037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 31451621 - 31451690
Alignment:
Q  58 cattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaa 127  Q
    ||||||| || |||||  || |||||||||| |||||||||||   |||| |||||||||||||||||||    
T  31451621 cattttggtaaattttggtttacattatggtactttgaataaagtcgcgtattgaataatttcgattaaa 31451690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 2e-48; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 27188142 - 27187980
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgcttt-gaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataa 143  Q
    |||||| ||||  |||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  27188142 atatgttgcgcggattttgctacattttccttgacatgatggtgcttttgaataaaaatcgtgttttgaataatttcgattaaagtcgcgttttgaataa 27188043  T
Q  144 ttgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||| || |||||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||    
T  27188042 ttgcgtattcgaataaagactaatttaatctaacatgaatacgaataattaacattgcgtaat 27187980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 7247104 - 7246965
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  7247104 acattttgtttgacattatggtacttagaataaaattgcatttggaataatttcgattaaagtcgcgttttgaataattgtgtattcgaataaaaactaa 7247005  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||| |||||| ||||||| | ||||||||||||| ||||    
T  7247004 ttaagtctaacatgaattcaactaattaaaattgcataat 7246965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 13895058 - 13895197
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||| ||||| || |||||||||| |||||    
T  13895058 acattttgtttgacattatggtacttagaataaaatcgcatttagaataatttcgattaaagtcgcgttttgaaaaattgcgtattcgaataaaaactaa 13895157  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  13895158 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 13895197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 44928469 - 44928367
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  44928469 gcgttttgaataatttcgattaaagtcgcgttttgaataattgtgtatttgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgt 44928370  T
Q  204 aat 206  Q
    |||    
T  44928369 aat 44928367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 30193599 - 30193459
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagacta 165  Q
    |||||||| ||||||||  |||| |||||||||||   || ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| ||||    
T  30193599 tacattttgcttgacatattggtactttgaataaattcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaacta 30193500  T
Q  166 attaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||| | |||||||||||| |||||    
T  30193499 attaaatctaacgtgaattcaactaattaaaattgtgtaat 30193459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 41578971 - 41578832
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||| ||||||||||||| || |||||||||| |||||    
T  41578971 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 41578872  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| |||||||||||| | ||||||||||||||||||    
T  41578871 ttaaatttaacgtgaattcaactaattaaaattgcgtaat 41578832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 51695126 - 51695253
Alignment:
Q  79 acattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacg 178  Q
    |||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||    
T  51695126 acattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgtgtattcgaataaaaactaattaaatctaacg 51695225  T
Q  179 tgaattcgaataattaaaattgcgtaat 206  Q
    ||||| | | ||||||||||||||||||    
T  51695226 tgaatccaactaattaaaattgcgtaat 51695253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 51012496 - 51012598
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    |||||||||||||||| |||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  51012496 gcgttttgaataattttgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgt 51012595  T
Q  204 aat 206  Q
    |||    
T  51012596 aat 51012598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 55268233 - 55268365
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||| | ||| |||||||| | | ||| ||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||    
T  55268233 acattttgtttgacattatgctacttagaataaaatttcatttggaataatttcgattaaagtcgcgatttgaataattgtgtattcgaataaaaactaa 55268332  T
Q  167 ttaaatctaacgtgaattcgaataattaaaatt 199  Q
    |||||||||| |||||||| | |||||||||||    
T  55268333 ttaaatctaaagtgaattcaactaattaaaatt 55268365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 2429530 - 2429391
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||||| |||||||||||||  | |||||||||| ||| |    
T  2429530 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaagtcgcgttttgaataattgcatattcgaataaaaactca 2429431  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  2429430 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 2429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 14632462 - 14632364
Alignment:
Q  108 tttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||||||||| ||||||||||||| || || ||||||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  14632462 tttgaataatttcgattaaagtcgcgttttgaataattgcgtatttgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgagtaat 14632364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 49611202 - 49611072
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||||| ||||||||||||||    
T  49611202 ttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaactaattaaatcta 49611103  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||   | |||||||||||| |||||    
T  49611102 acgtgaatcaaactaattaaaattgtgtaat 49611072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 11378189 - 11378290
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    |||||||||||||||||||||||||| || ||||||||||||  || |||||||||| || ||||||||||||||||||||| | |||||||||||||||    
T  11378189 gcgttttgaataatttcgattaaagttgcgttttgaataatttcgtattcgaataaaaacaaattaaatctaacgtgaattcaactaattaaaattgcgt 11378288  T
Q  204 aa 205  Q
    ||    
T  11378289 aa 11378290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 46413502 - 46413611
Alignment:
Q  97 taaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaa 196  Q
    ||||| ||| ||| ||||||||||||||||| | || ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||    
T  46413502 taaaattgcatttggaataatttcgattaaatttgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaa 46413601  T
Q  197 attgcgtaat 206  Q
    ||||||||||    
T  46413602 attgcgtaat 46413611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 51016284 - 51016183
Alignment:
Q  105 cgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    ||||||||||||||| |||||||||||| ||||||||||||| || ||| |||||| |||||||||||||||||||||||| | ||||||||||| ||||    
T  51016284 cgttttgaataattttgattaaagtcgcgttttgaataattgcgtattcaaataaaaactaattaaatctaacgtgaattcaactaattaaaattacgta 51016185  T
Q  205 at 206  Q
    ||    
T  51016184 at 51016183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 43570928 - 43570789
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||| ||||||||||| |||||||||| || || ||| |||||| |||||    
T  43570928 acattttatttgacattatggtacttagaataaaatcgcatttggaataatttcaattaaagtcgcgttttgaataaatgcgtattcaaataaaaactaa 43570829  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| ||| |||||||| | ||||||||||||||||||    
T  43570828 ttaaatttaatgtgaattcaactaattaaaattgcgtaat 43570789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 45099626 - 45099765
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||| | ||||||||||||   | |||||||||| |||||    
T  45099626 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcacgttttgaataatttgttattcgaataaaaactaa 45099725  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||| |||||||| |||||    
T  45099726 ttaaatctaacgtgaattcaactaactaaaattgtgtaat 45099765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 46345763 - 46345902
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||| | ||| ||||||||  |  ||| |||||||||| ||||||||||| ||||||||||||| || |||||||||| |||||    
T  46345763 acattttgtttgacattatgttacttagaataaaatcgtatttggaataatttctattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 46345862  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||| ||||||||||||||| | |||||||||||| |||||    
T  46345863 ttagatctaacgtgaattcaactaattaaaattgtgtaat 46345902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 49217904 - 49218043
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||  |||| |||||||| || |||||||||| | |||    
T  49217904 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgtgtttttaataattgcgtattcgaataaaaattaa 49218003  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  49218004 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 49218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 42322601 - 42322699
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcg 202  Q
    ||||||||||||| ||||||||||||||| |||| |||||||| || |||||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  42322601 gcgttttgaataaattcgattaaagtcgcgttttaaataattgcgtattcgaataaaaactaattaaatataacgtgaattcaactaattaaaattgcg 42322699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 52568605 - 52568735
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    |||||||||| || |||  |||||||  || ||| |||||||||||||||||| ||  ||||||||||||| || |||||||||| ||||||||||||||    
T  52568605 ttgacattatcgtacttaaaataaaatcgcatttggaataatttcgattaaagccgtgttttgaataattgcgtattcgaataaaaactaattaaatcta 52568704  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||| ||||||||||||    
T  52568705 acgtgaattcaactaattgaaattgcgtaat 52568735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 20375138 - 20375275
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgc----------attttg---aataattgtgtgttc 153  Q
    ||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||          ||||||   || |||||||| |||    
T  20375138 acattttgcttgacattatggtgctttgaataaaattgtattttgaataatttcgattaaagtcgcgtattgattaattttgattaaaaattgtgtattc 20375237  T
Q  154 gaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    |||||||||||||||||||||||||||||||| |||||    
T  20375238 gaataaagactaattaaatctaacgtgaattcaaataa 20375275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 10052581 - 10052676
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| ||||||||||  ||| ||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  10052581 gaataatttcaattaaagtcgtgtttcgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaattaattaaaattgcgtaat 10052676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 204
Target Start/End: Original strand, 34646414 - 34646513
Alignment:
Q  105 cgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    |||||||||||||||||||||||| ||| |||||||||||||  | ||| |||||| | |||||||||||||||||||||| ||||||||| ||||||||    
T  34646414 cgttttgaataatttcgattaaagccgcgttttgaataattgcatattcaaataaaaaataattaaatctaacgtgaattcaaataattaatattgcgta 34646513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 43478083 - 43477944
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| |||||||   || |||  ||||||||||||||||||||  |||| |||||||| || |||||||||| |||||    
T  43478083 acattttgtttgacattatggtacttagaataaagtcgcatttgaaataatttcgattaaagtcgtgtttttaataattgcgtattcgaataaaaactaa 43477984  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | |||||||||||| |||||    
T  43477983 ttaaatctaacgtgaatccaactaattaaaattgtgtaat 43477944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 34471287 - 34471381
Alignment:
Q  112 aataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||| ||||||||| || |||||||||| | |||||||||||||||||||||  | ||||||||||||| ||||    
T  34471287 aataatttcgattaaagtcacgtttcgaataattgcgtattcgaataaaaattaattaaatctaacgtgaattgaactaattaaaattgcataat 34471381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 34692502 - 34692597
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| |||| ||||| || || |||||||| | |||||||||||||||||||||| | | |||| |||||||| ||||    
T  34692502 gaataatttcgattaaagtcgcgtttttaataactgcgtattcgaatagaaactaattaaatctaacgtgaatccaactaataaaaattgcataat 34692597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 49274482 - 49274331
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt------------gtgtgttc 153  Q
    |||||||||||||||||  |||| |||||||||||   ||||||||||||||||| ||||||  ||||||| ||||||||            |||| |||    
T  49274482 tacattttccttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaaccgcatttggaataatttcgattaaactcgtgt-ttc 49274384  T
Q  154 gaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||||||||||    
T  49274383 gaataaaaactaattaaatctaacatgaattcaactaattaaaattgcgtaat 49274331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 392
Target Start/End: Complemental strand, 12821692 - 12821512
Alignment:
Q  210 ttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaaatttt 309  Q
    |||||||||||||||||||| | ||| ||| | |  |||||  ||||||||||| |||||   | ||||||||| ||| |||  |||||||  || ||||    
T  12821692 ttattctaaatgcttattaggt-atgttataagttaacctagattttccctctaattatcttaccttaattgttgttattcatttaaccctctaattttt 12821594  T
Q  310 ccctccactaatatgcctcttttgaaattgaaattgtttattgttttgtttccttgattttctgcttgcaaatagaaaacgtg 392  Q
     |||||||||||||| || |||||||||||||||| | ||||||| ||||| | ||||||| |||||| |||||| |||||||    
T  12821593 tcctccactaatatgtctgttttgaaattgaaatt-tctattgttatgttttcctgattttttgcttgaaaatagtaaacgtg 12821512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 392
Target Start/End: Complemental strand, 12827334 - 12827154
Alignment:
Q  210 ttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaaatttt 309  Q
    |||||||||||||||||||| | ||| ||| | |  |||||  ||||||||||| |||||   | ||||||||| ||| |||  |||||||  || ||||    
T  12827334 ttattctaaatgcttattaggt-atgttataagttaacctagattttccctctaattatcttaccttaattgttgttattcatttaaccctctaattttt 12827236  T
Q  310 ccctccactaatatgcctcttttgaaattgaaattgtttattgttttgtttccttgattttctgcttgcaaatagaaaacgtg 392  Q
     |||||||||||||| || |||||||||||||||| | ||||||| ||||| | ||||||| |||||| |||||| |||||||    
T  12827235 tcctccactaatatgtctgttttgaaattgaaatt-tctattgttatgttttcctgattttttgcttgaaaatagtaaacgtg 12827154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 50458459 - 50458543
Alignment:
Q  97 taaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtga 181  Q
    ||||| ||| ||| |||||||||||||||||||||| ||||||||||||| || || |||||||   ||||||||||||||||||    
T  50458459 taaaattgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtatttgaataaaatttaattaaatctaacgtga 50458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 55206141 - 55206200
Alignment:
Q  112 aataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaa 171  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  55206141 aataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaa 55206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 24701453 - 24701530
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataat 144  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||||||||||    
T  24701453 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataat 24701530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 25886953 - 25887002
Alignment:
Q  142 aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25886953 aattgcgtattcgaataaagactaattaaatctaacgtgaattcgaataa 25887002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 25887836 - 25887885
Alignment:
Q  142 aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  25887836 aattgtgtattcgaataaagactaattaaacctaacgtgaattcgaataa 25887885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 25887896 - 25887936
Alignment:
Q  151 ttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25887896 ttcgaataaagactaattaaatctaacgtgaattcgaataa 25887936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 44928534 - 44928455
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| |||| ||||||||||||    
T  44928534 tacattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcgcgttttgaataatt 44928455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 51012431 - 51012510
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| |||| ||||||||||||    
T  51012431 tacattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcgcgttttgaataatt 51012510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 27096843 - 27096896
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataa 99  Q
    |||||||||||  ||||||||||||||| |||||||||||||| ||||||||||    
T  27096843 atatgtcgcgcttattttgctacatttttcttgacattatggtactttgaataa 27096896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 10052512 - 10052588
Alignment:
Q  69 attttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||| ||||||||  |||| |||||||||||   ||||||||||||||||| |||||| |||||||| ||||||||    
T  10052512 attttgcttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcgcatttggaataatt 10052588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 11378124 - 11378203
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  | |||||| ||||||||| |||||| |||| ||||||||||||    
T  11378124 tacattttgcttgacatattggtactttgaataaattttcgttttaaataatttcaattaaaatcgcgttttgaataatt 11378203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 517
Target Start/End: Complemental strand, 12821452 - 12821392
Alignment:
Q  457 cagcatcccacttctccatattgtttctgtttccaacacaaccattataccttcacttatg 517  Q
    |||| ||||||||||||||||| ||| ||||||||||||| || |||| |||||| |||||    
T  12821452 cagcttcccacttctccatattatttttgtttccaacacatcctttatgccttcaattatg 12821392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 517
Target Start/End: Complemental strand, 12827094 - 12827034
Alignment:
Q  457 cagcatcccacttctccatattgtttctgtttccaacacaaccattataccttcacttatg 517  Q
    |||| ||||||||||||||||| ||| ||||||||||||| || |||| |||||| |||||    
T  12827094 cagcttcccacttctccatattatttttgtttccaacacatcctttatgccttcaattatg 12827034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 25886915 - 25886951
Alignment:
Q  155 aataaagactaattaaatctaacgtgaattcgaataa 191  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25886915 aataaagactaattaaacctaacgtgaattcgaataa 25886951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 46413444 - 46413523
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   ||||||||||||||||  |||||| | |||||| ||||||||    
T  46413444 tacattttgcttgacatattggtactttgaataaattcgcgttttgaataatttatattaaaattgcatttggaataatt 46413523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 51016350 - 51016271
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   | ||||||||||||||| |||||| || | ||||||||||||    
T  51016350 tacattttgcttgacatattggtactttgaataaattcgtgttttgaataatttcaattaaaatcacgttttgaataatt 51016271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 43808840 - 43808782
Alignment:
Q  205 atcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctcta 263  Q
    |||| ||| |||||||||||||||| | ||||||||| ||  |||||||||||||||||    
T  43808840 atcccttactctaaatgcttattaggtcatgctatcattaaccctaatttttccctcta 43808782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 1e-46; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 33404791 - 33404641
Alignment:
Q  57 acattttgctacattttccttgacattatggtgcttt-gaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcg 154  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||||| ||||||||||  ||||||||||||| || ||||    
T  33404791 acattttgctacattttccttgacat-atggtgcttttgaataaaaatcgtgttttgaataatttctattaaagtcgtgttttgaataattgcgtattcg 33404693  T
Q  155 aataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33404692 aacaaagactaattaaatctaacgtgaattcgaataattaaaattgtgtaat 33404641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 40676574 - 40676713
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  40676574 acattttatttgacattatggtacttagaataaaaccgcatttggaataatttcgattaaagtcgcgttttgaaaaattgtgtattcgaataaaaactaa 40676673  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  40676674 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 40676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 5421136 - 5421037
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaa 205  Q
    ||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  5421136 gttttgaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaa 5421037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 16582858 - 16582719
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||| ||||| || |||||||||| |||||    
T  16582858 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaaaaattgcgtattcgaataaaaactaa 16582759  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||| ||||    
T  16582758 ttaaatctaacgtgaattcaactaattaaaattgcataat 16582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 202 - 528
Target Start/End: Original strand, 16965138 - 16965463
Alignment:
Q  202 gtaatcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaattgttattagtcacctaacccta 301  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| |||||||||||| ||||| | |||  | ||||||| || |||||||| || ||||     
T  16965138 gtaatcccttactctaaatgcttattaggtgatgttataactaaacctaatttttctctctaataatcatggattaattatttttagtcacttagccctc 16965237  T
Q  302 caaattttccctccactaatatgcctcttttgaaattgaaattgtttattgttttgtttccttgattttc-tgcttgcaaatagaaaacgtgggttgcat 400  Q
    ||| |||||||||||||  |||||||  ||||||||| ||| ||| ||||||| | ||||| |||||| | |||||| ||||||||||| || | |  ||    
T  16965238 caatttttccctccactgttatgcctgatttgaaattcaaa-tgtgtattgttgtctttcc-tgatttccttgcttgaaaatagaaaacatgagctttat 16965335  T
Q  401 ttactcatttttgtgctatttaattggacctttctcataccccatgcaaaatgaatcagcatcccacttctccatattgtttctgtttccaacacaacca 500  Q
     |  |||||| ||||||||| | |  |||||||| |||| ||  |||||||| ||||     ||||||||||||| |||||||||||||||||||| ||     
T  16965336 gtggtcatttgtgtgctattaattaagacctttcccatatcctgtgcaaaattaatctaatacccacttctccatgttgtttctgtttccaacacatccc 16965435  T
Q  501 ttataccttcacttatgaactatgtata 528  Q
    |||||| |||| ||||||||||| ||||    
T  16965436 ttatacattcagttatgaactatatata 16965463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 19470786 - 19470916
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||| ||||||||||||| || |||||||||| ||||||||||||||    
T  19470786 ttgacattatggtacttagaataaaaccgcatttagaataattttgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatcta 19470885  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | |||||||||||| |||||    
T  19470886 acgtgaattcaactaattaaaattgtgtaat 19470916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 23408769 - 23408630
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||| ||||||||| ||||||||||| ||||||||||||| || |||||||||| |||||    
T  23408769 acattttgtttgacattatggtacttagaataaaatcgcattttaaataatttcaattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 23408670  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| |||||||||||| | |||||||||||| |||||    
T  23408669 ttaaatgtaacgtgaattcaactaattaaaattgtgtaat 23408630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 24107994 - 24108089
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  24107994 gaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 24108089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 2918530 - 2918660
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||| ||||  || ||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||| |||||||||||||     
T  2918530 ttgacattatggtacttagaacaaaatcgcatttggaataatttcgattaaagtcgcgttttaaataattgtgtattctaataaaaactaattaaatctg 2918629  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||||||||    
T  2918630 acgtgaattcaactaattaaaattgcgtaat 2918660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 37311861 - 37311953
Alignment:
Q  107 ttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaatt 199  Q
    ||||||||||||| |||||||||||  ||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  37311861 ttttgaataattttgattaaagtcgtgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaaataattaaaatt 37311953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 43492508 - 43492368
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||||||||||||  | || ||||||| |||||    
T  43492508 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcatatttgaataaaaactaa 43492409  T
Q  167 ttaaatc-taacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||| ||| |||||||| | ||||||||||||||||||    
T  43492408 ttaaatcttaaggtgaattcaactaattaaaattgcgtaat 43492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 35492579 - 35492484
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||  ||||||||||||| || |||||||||| ||||||||||| |||||||||||| | ||||||||||||||||||    
T  35492579 gaataatttcgattaaagtcgtgttttgaataattgcgtattcgaataaaaactaattaaatataacgtgaattcaactaattaaaattgcgtaat 35492484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 6977822 - 6977720
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    |||||||||||||||| ||||||||||||||  ||||||| || || |||||||||| |||||| ||||||||||||||||| | |||||||||||||||    
T  6977822 gcgttttgaataattttgattaaagtcgcatcatgaataactgcgtattcgaataaaaactaatcaaatctaacgtgaattcaactaattaaaattgcgt 6977723  T
Q  204 aat 206  Q
    |||    
T  6977722 aat 6977720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 17538140 - 17538235
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||| |||||||||  | |||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||    
T  17538140 gaataatttcgattaaagtcgcgtttcgaataattgcatattcgaataaaaactaattaaatctaacgtaaattcaactaattaaaattgcgtaat 17538235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 34520953 - 34521048
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||| ||||||||||||  ||||||||||||| || |||||||||| | ||||||||||||| |||||||| | ||||||||||||||||||    
T  34520953 gaataattacgattaaagtcgtgttttgaataattgcgtattcgaataaaaattaattaaatctaatgtgaattcaactaattaaaattgcgtaat 34521048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 41498274 - 41498391
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||| ||||| ||| ||||||||  || |||  ||||||||||| | ||||||| ||||||||||||| || |||||||||| |||||    
T  41498274 acattttgtttgacatgatggtacttagaataaaatcgcatttgaaataatttcgactgaagtcgcgttttgaataattgcgtattcgaataaaaactaa 41498373  T
Q  167 ttaaatctaacgtgaatt 184  Q
    ||||||||||||||||||    
T  41498374 ttaaatctaacgtgaatt 41498391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 3942406 - 3942311
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| |||| |||||||  || |||||||||| |||||||||||||||| ||||| | | | ||||||||||||||||    
T  3942406 gaataatttcgattaaagtcgcgtttttaataatttcgtattcgaataaaaactaattaaatctaacatgaatccaactgattaaaattgcgtaat 3942311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 17538068 - 17538147
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   ||||||||||||||||| |||||| |||||||| ||||||||    
T  17538068 tacattttgcttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcgcatttggaataatt 17538147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 24107922 - 24108001
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   ||||||||||||||||| |||||| |||||||| ||||||||    
T  24107922 tacattttgcttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcgcatttggaataatt 24108001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 37311793 - 37311872
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   ||||||||||||||||| |||||  ||| |||||||||||||    
T  37311793 tacattttacttgacatattggtactttgaataaattcgcgttttgaataatttcaattaacatcggattttgaataatt 37311872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 5421202 - 5421124
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| |||  ||||||||||||    
T  5421202 acattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcgtgttttgaataatt 5421124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 18879683 - 18879643
Alignment:
Q  151 ttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  18879683 ttcgaataaagactaattaaatccagcgtgaattcgaataa 18879643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 34520881 - 34520960
Alignment:
Q  66 tacattttccttgacattatggtg-ctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| |||||||| ||| || ||||||||||| |  |||||||||||||||| |||||| |||||||| ||||||||    
T  34520881 tacattttgcttgacat-atgatgactttgaataaatacacgttttgaataatttcaattaaaatcgcatttggaataatt 34520960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 15891132 - 15891194
Alignment:
Q  83 tatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||| |||||||||||   |||| ||||||||||| |||||||||||| | ||||||||||    
T  15891132 tatggtactttgaataaagtcgcgtattgaataattttgattaaagtcgcgtattgaataatt 15891194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 41579250 - 41579308
Alignment:
Q  205 atcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctcta 263  Q
    |||| ||| |||||||||||||||| | ||||||||| ||  |||||||||||||||||    
T  41579250 atcccttactctaaatgcttattaggtcatgctatcattaaccctaatttttccctcta 41579308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 28000669 - 28000726
Alignment:
Q  204 aatcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctc 261  Q
    ||||| ||||||||||||||| |||| | ||||||||| ||  |||||||||||||||    
T  28000669 aatcccttattctaaatgcttgttaggtcatgctatcattaaccctaatttttccctc 28000726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 40703406 - 40703265
Alignment:
Q  65 ctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagact 164  Q
    |||||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| |||    
T  40703406 ctacattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaact 40703307  T
Q  165 aattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  40703306 aattaaatctaacgtgaattcaactaattaaaattgcgtaat 40703265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 42604485 - 42604355
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||||||||  |  ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||||    
T  42604485 ttgacattatggtacttggaataaaatcgtatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaatactaattaaatcta 42604386  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||| ||||    
T  42604385 acgtgaattcaactaattaaaattgcataat 42604355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 18439455 - 18439594
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || ||| |||||| |||||    
T  18439455 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcaaataaaaactaa 18439554  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| ||||||||| || | ||||||||||||||||||    
T  18439555 ttaaatataacgtgaagtcaactaattaaaattgcgtaat 18439594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 41856154 - 41856293
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||| ||||| ||||||||||| ||||||||||||| || |||||||||| |||||    
T  41856154 acattttttttgacattatggtacttagaataaaatcgcatttgaaatcatttcaattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 41856253  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  41856254 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 41856293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 44051486 - 44051347
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| |||||||| ||| |||  |||| |||||||||||||||| |||| |||||||| || |||||||||| |||||    
T  44051486 acattttgtttgacattatggtacttagaataaaattgcatttgaaatagtttcgattaaagtcgcgtttttaataattgagtattcgaataaaaactaa 44051387  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  44051386 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 44051347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 22550120 - 22549981
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  |||||||||||||||| |||| |||| ||||||||||| || ||||||| |||||    
T  22550120 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaactcgcgtttttaataattgtgtatttgaataaaaactaa 22550021  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  22550020 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 22549981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 24862389 - 24862250
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||||||| |||||||| |||| |||||||  || |||||||||| |||||    
T  24862389 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgatgaaagtcgcgtttttaataattccgtattcgaataaaaactaa 24862290  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  24862289 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 24862250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 26487454 - 26487355
Alignment:
Q  107 ttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||| |||||| |||||||||||||||||| ||||| | ||||||||||||||||||    
T  26487454 ttttgaataatttcgattaaagtcgcgttttgaataattgcgtattcaaataaaaactaattaaatctaacgttaattcaactaattaaaattgcgtaat 26487355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 41276113 - 41275974
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||||| |||| |||||||| || |||||||||| |||||    
T  41276113 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaactaa 41276014  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| |||||| | | ||||||||||||||||||    
T  41276013 ttaaatctaatgtgaatccaactaattaaaattgcgtaat 41275974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 28167802 - 28167707
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||| |||||||||||| | |||||||||||| |||||    
T  28167802 gaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatttaacgtgaattcaactaattaaaattgtgtaat 28167707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 42168166 - 42168254
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaatt 199  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||| ||| |||||||| | |||||||||||    
T  42168166 gaataatttcgattaaagtcgcgtttcgaataattgtgtattcgaataaaaactaattaaatttaatgtgaattcaactaattaaaatt 42168254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 38033122 - 38033217
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||| ||||||||| || ||| ||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  38033122 gaataattttgattaaagttgcgtttcgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgagtaat 38033217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 19241862 - 19241953
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaa 197  Q
    |||||||||||||| |||| ||||||  ||||||||||||| || |||||||||| |||||||||||||||| ||||||| | |||||||||    
T  19241862 gttttgaataattttgattgaagtcgggttttgaataattgcgtattcgaataaaaactaattaaatctaacatgaattcaactaattaaaa 19241953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 19315046 - 19315137
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaa 197  Q
    |||||||||||||| |||| ||||||  ||||||||||||| || |||||||||| |||||||||||||||| ||||||| | |||||||||    
T  19315046 gttttgaataattttgattgaagtcgggttttgaataattgcgtattcgaataaaaactaattaaatctaacatgaattcaactaattaaaa 19315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 26487522 - 26487443
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| |||||||||||||||||    
T  26487522 tacattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcgcattttgaataatt 26487443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 38033050 - 38033129
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   || |||||||||||||| |||||| |||||||| ||||||||    
T  38033050 tacattttgcttgacatattggtactttgaataaattcgctttttgaataatttcaattaaaatcgcatttggaataatt 38033129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 42168094 - 42168173
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||||  |||||||  |||| |||||||||||   ||||||||||||||||| |||||| |||||||| ||||||||    
T  42168094 tacattttgtttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcgcatttggaataatt 42168173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 6e-39; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 49422919 - 49423049
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||||    
T  49422919 ttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatcta 49423018  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||||||||    
T  49423019 acgtgaattcaactaattaaaattgcgtaat 49423049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 44559481 - 44559620
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||| | |||||||||||||||| |||||||||| |||||    
T  44559481 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcacgttttgaataattgtgtattcgaataaaaactaa 44559580  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| |||||||||||| | ||||||||||||||||||    
T  44559581 ttaaatgtaacgtgaattcaactaattaaaattgcgtaat 44559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 6281679 - 6281815
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||| | |||||||||||||||| |||||||||| |||||    
T  6281679 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaagtcacgttttgaataattgtgtattcgaataaaaactaa 6281778  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||| | |||||||||||||||    
T  6281779 ttaaatctaacgtgaattcaactaattaaaattgcgt 6281815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 49791138 - 49791238
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaa 205  Q
    ||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  49791138 gttttgaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaa 49791237  T
Q  206 t 206  Q
    |    
T  49791238 t 49791238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 1043785 - 1043646
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| |||||||| ||| |||  ||||||||||||||||||||| |||| ||| |||| || |||||||||| |||||    
T  1043785 acattttgtttgacattatggtacttagaataaaattgcatttgaaataatttcgattaaagtcgcgtttttaattattgcgtattcgaataaaaactaa 1043686  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  1043685 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 1043646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 2774020 - 2773919
Alignment:
Q  105 cgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    |||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||| |||||||||||| | ||||||||||||||||    
T  2774020 cgttttgaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatttaacgtgaattcaactaattaaaattgcgta 2773921  T
Q  205 at 206  Q
    ||    
T  2773920 at 2773919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 956608 - 956747
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||| |||||||||||||  | |||||||||| |||||    
T  956608 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgcgttttgaataattgcatattcgaataaaaactaa 956707  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  956708 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 956747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 34528963 - 34529102
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||||||||||| |||| |||| |||||||| || |||||||||| |||||    
T  34528963 acattttgtttgacattatggtacttcgaataaaatcgcatttggaataatttcgattaaactcgcgtttttaataattgcgtattcgaataaaaactaa 34529062  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  34529063 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 34529102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 37867503 - 37867364
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||| ||||||||| | ||||||| ||||| || |||||||||| |||||    
T  37867503 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcaattaaagtcacgttttgaaaaattgcgtattcgaataaaaactaa 37867404  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  37867403 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 37867364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 51427355 - 51427494
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||  | |||||||||||||||| |||||||||| |||||    
T  51427355 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaagtttcgttttgaataattgtgtattcgaataaaaactaa 51427454  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  51427455 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 51427494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 56139946 - 56139807
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||||| |||||    
T  56139946 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaactaa 56139847  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | |||||| |||||||||||    
T  56139846 ttaaatctaacgtgaatccaactaattataattgcgtaat 56139807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 21170459 - 21170365
Alignment:
Q  112 aataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  21170459 aataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 21170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 47871068 - 47870966
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    |||||||||||||||||||||||| |||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||| ||    
T  47871068 gcgttttgaataatttcgattaaaatcgcgttttgaataattgcgtattcgaataaacactaattaaatctaacgtgaattcaactaattaaaattgggt 47870969  T
Q  204 aat 206  Q
    |||    
T  47870968 aat 47870966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 10315453 - 10315353
Alignment:
Q  105 cgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  10315453 cgttttgaata-tttcgattaaagttgtgttttgaataattgtgtattcgaataaaaactaattaaatctaacgtgaattcgaataattaaaattgtgta 10315355  T
Q  205 at 206  Q
    ||    
T  10315354 at 10315353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 49572153 - 49572016
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| |||  |||||||  || ||| |||||||||||||||||||| | ||||||||||||| || |||||||||| |||||    
T  49572153 acattttgtttgacattatggtacttaaaataaaatcgcatttggaataatttcgattaaagtcacgttttgaataattgcgtattcgaataaaaactaa 49572054  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    |||||||||| |||||||| | ||||||||||||||||    
T  49572053 ttaaatctaatgtgaattcaactaattaaaattgcgta 49572016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 4784571 - 4784671
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||| ||||||||||||  || || ||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  4784571 gcgttttgaataatttcgattaaagtcgcgttttgaataatttcgtatttgaataaaaactaattaaatataacgtgaattcaaataattaaaattgcgt 4784670  T
Q  204 a 204  Q
    |    
T  4784671 a 4784671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 9490518 - 9490379
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| |||  |||||||  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||||| |||||    
T  9490518 acattttgtttgacattatggtacttaaaataaaatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaactaa 9490419  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||   | ||||||||||||||||||    
T  9490418 ttaaatctaacgtgaatctaactaattaaaattgcgtaat 9490379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 36775717 - 36775811
Alignment:
Q  112 aataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||| |||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  36775717 aataattttgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 36775811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 10315540 - 10315443
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaa-tgcgttttgaataatttcgattaaagtcgcattttgaata 142  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||| | |||||||||    
T  10315540 atatgtcgcgcgcattttgctacattttccttgacattatggtgttttaaataaaaattgtgttttgaataatttcgattaaagtcacgttttgaata 10315443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 39589823 - 39589684
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| |||||| |  || ||| |||||||||||||||||||||| |||| |||||||| || |||||||||| |||||    
T  39589823 acattttgtttgacattatggtacttagaataagatcgcatttggaataatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaactaa 39589724  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | |||| | | ||||||||||||||||||    
T  39589723 ttaaatctaatgggaatccaactaattaaaattgcgtaat 39589684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 21411130 - 21411287
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaat---- 141  Q
    ||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||  |||||||||||||||| |||||||||||  | ||||||        
T  21411130 atatgtcgcgcgcattttgctacattttgcttgacattatggtactttaaataaaatcgcgttttgaataattttgattaaagtcgtgtattgaataatt 21411229  T
Q  142 ---------aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaata 190  Q
             ||||| || |||||||||||||| |||||||||||||||||||||||||    
T  21411230 tcaattaaaaattgcgtattcgaataaagactgattaaatctaacgtgaattcgaata 21411287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 284 - 496
Target Start/End: Original strand, 16036241 - 16036453
Alignment:
Q  284 attagtcacctaaccctacaaattttccctccactaatatgcctcttttgaaattgaaattgtttattgttttgtttccttgattttctgcttgcaaata 383  Q
    ||||||||| | |||||| ||| |||||||||||| ||| ||||  ||||||||| ||| |||| |||||| ||||||| | | || | |||  |||| |    
T  16036241 attagtcacttgaccctaaaaaatttccctccacttataagcctaatttgaaattcaaaatgttgattgttgtgtttccctaaattacggctatcaaaaa 16036340  T
Q  384 gaaaacgtgggttgcatttactcatttttgtgctatttaattggacctttctcataccccatgcaaaatgaatcagcatcccacttctccatattgtttc 483  Q
    ||||  ||| | ||||| |||||||||   |||||||||||  |||||||  ||||||||||||||||| ||| |||   ||||||||||||||||||||    
T  16036341 gaaattgtgtgatgcatgtactcatttggctgctatttaatcagacctttgccataccccatgcaaaataaattagctatccacttctccatattgtttc 16036440  T
Q  484 tgtttccaacaca 496  Q
    | |||||||||||    
T  16036441 tatttccaacaca 16036453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 43888708 - 43888808
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaa 205  Q
    ||||||||||||||||||||||||||| |||||||||| || || || ||||||| | ||||||||||||||||||||| || ||||||||||||| |||    
T  43888708 gttttgaataatttcgattaaagtcgcgttttgaataactgcgtattagaataaaaattaattaaatctaacgtgaatttgactaattaaaattgcataa 43888807  T
Q  206 t 206  Q
    |    
T  43888808 t 43888808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 21412315 - 21412216
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||  |||||||||||||||| |||||||||||  | ||||||||||    
T  21412315 atatgtcgcgcgcattttgctacattttgcttgacattatggtactttaaataaaatcgcgttttgaataattttgattaaagtcgtgtattgaataatt 21412216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 17054647 - 17054740
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaatt 199  Q
    ||||||||||||||||||| |||||||||||||||||||||  | |||||||||| | ||||||||| ||| |||||||| |||||||||||||    
T  17054647 gttttgaataatttcgattgaagtcgcattttgaataattgcatattcgaataaaaattaattaaatataatgtgaattcaaataattaaaatt 17054740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 9718304 - 9718217
Alignment:
Q  58 cattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||||||||||||  ||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  9718304 cattttgctacattttgtttgacattatggtacttttaataaaatcgcgttttgaataatttcgattaaagtcgcgtattgaataatt 9718217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 34152440 - 34152579
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||| | ||| ||||||||  || |||  ||||||||||||||||||||  ||||||||||||| || |||||||||| |||||    
T  34152440 acattttgtttgacattatgatacttagaataaaatcgcatttgaaataatttcgattaaagtcgtgttttgaataattgagtattcgaataaaaactaa 34152539  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| |||| ||||||| | | |||||||||| |||||    
T  34152540 ttaaatgtaacttgaattcaactgattaaaattgtgtaat 34152579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 42887303 - 42887185
Alignment:
Q  88 tgctttgaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcg 186  Q
    ||||| |||||||||| |||||| ||||||||| |||||||||| | ||||||||||||| || ||| |||||| | ||||||||||||| |||| |||     
T  42887303 tgcttcgaataaaaatcgcgttt-gaataattttgattaaagtctcgttttgaataattgcgtattcaaataaaaattaattaaatctaatgtgagttca 42887205  T
Q  187 aataattaaaattgcgtaat 206  Q
    ||||||||||||||||||||    
T  42887204 aataattaaaattgcgtaat 42887185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 49816641 - 49816740
Alignment:
Q  104 gcgttttgaataatttcgattaaagtc-----gcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaat 198  Q
    ||||| |||||||||||||||||||||     || ||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  49816641 gcgttctgaataatttcgattaaagtcacgtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaaataattaaaat 49816740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 51027017 - 51027112
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  51027017 gaataattttgattaaagtcgtgtttcgaataattgcgtattcgaataaaaactaattaaatctaatgtgaattcaactaattaaaattgcgtaat 51027112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 22437876 - 22437795
Alignment:
Q  125 aaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||||| |||||||||||| | ||||||||||||||||||    
T  22437876 aaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatataacgtgaattcaactaattaaaattgcgtaat 22437795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 45940522 - 45940428
Alignment:
Q  112 aataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||| |||||||  |||  |||||||| || |||||||||| ||||||||||||||| |||||||| | |||||||||||| |||||    
T  45940522 aataatttcgatcaaagtcgtgtttcaaataattgcgtattcgaataaaaactaattaaatctaatgtgaattcaactaattaaaattgtgtaat 45940428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 4784529 - 4784585
Alignment:
Q  90 ctttgaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4784529 ctttgaataaaaattgcgttttgaataatttcgattaaagtcgcgttttgaataatt 4784585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9718180 - 9718131
Alignment:
Q  142 aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||||    
T  9718180 aattgcgtattcgaataaagactaattaaatctaacgtgaatttgaataa 9718131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 49816578 - 49816655
Alignment:
Q  68 cattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||| ||||||||  |||| |||||||||||   |||||||||||||||||||||||| |||| || |||||||||    
T  49816578 cattttgcttgacatattggtactttgaataaattcgcgttttgaataatttcgattaaaatcgcgttctgaataatt 49816655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 2774086 - 2774007
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  |||||||| ||||||||| |||||| || | ||||||||||||    
T  2774086 tacattttgcttgacatattggtactttgaataaatttgcgttttaaataatttcaattaaaatcacgttttgaataatt 2774007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 25763577 - 25763483
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||  |||||||| || |||  |||||||| || |||||||||| | ||||||||| ||| |||||||| | ||||||||||||||||||    
T  25763577 gaataattttaattaaagttgcgtttcaaataattgcgtattcgaataaaaa-taattaaatttaatgtgaattcaactaattaaaattgcgtaat 25763483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 28083176 - 28083134
Alignment:
Q  164 taattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  28083176 taattaaatctaacgtgaattcaactaattaaaattgcgtaat 28083134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 19514485 - 19514582
Alignment:
Q  246 acctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaaattttccctccactaatatgcctcttttgaaattgaaat 343  Q
    |||||||||||||||||| | | ||  ||||||||| || | ||| | |||||||||||||||||||||| ||  |||||||  ||||||||| ||||    
T  19514485 acctaatttttccctctaataaaccttcattaattgctaatggtcccttaaccctacaaattttccctcctcttctatgcctaatttgaaattcaaat 19514582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 21412194 - 21412158
Alignment:
Q  154 gaataaagactaattaaatctaacgtgaattcgaata 190  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21412194 gaataaagactgattaaatctaacgtgaattcgaata 21412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 21170532 - 21170453
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  || | |||||||||||   ||||||||||||||||| |||||| ||||||||  |||||||    
T  21170532 tacattttgcttgacatattgatactttgaataaattcgcgttttgaataatttcaattaaaatcgcatttgaaataatt 21170453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 43888641 - 43888720
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   | ||||||||||||||| |||||| |||  ||||||||||||    
T  43888641 tacattttgcttgacatagtggtactttgaataaattcgtgttttgaataatttcaattaaaatcgtgttttgaataatt 43888720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 47871133 - 47871054
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||| ||||||  |||||||| ||||||||| || ||| |||| ||||||||||||    
T  47871133 tacattttgcttgacatattggtacttttaataaatttgcgttttaaataatttcaatgaaaatcgcgttttgaataatt 47871054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 49791071 - 49791150
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||  |||||||||||  |||||||| ||||||||| |||||| |||  ||||||||||||    
T  49791071 tacattttgcttgacatattggcactttgaataaatttgcgttttaaataatttcaattaaaatcgtgttttgaataatt 49791150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 51026945 - 51027024
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||    |||||||||||||||| || ||| |||||||| ||||||||    
T  51026945 tacattttgcttgacatattggtactttgaataaattctcgttttgaataatttcaatgaaaatcgcatttggaataatt 51027024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 4723232 - 4723372
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagacta 165  Q
    |||||||| || |||||  |||| |||||||||||   ||||||||||||||||| |||||| |||| ||||||||||||| || |||||||||| ||||    
T  4723232 tacattttgctagacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcgcgttttgaataattgcgtattcgaataaaaacta 4723331  T
Q  166 attaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  4723332 attaaatctaacgtgaattcaactaattaaaattgcgtaat 4723372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 18309313 - 18309173
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagacta 165  Q
    ||||||||  ||||||||| ||| ||| |||||||| ||| ||| ||||||||| || ||||||||| |||||||||||||||| |||||||||| | ||    
T  18309313 tacattttgtttgacattacggtacttggaataaaattgcatttggaataattttgaataaagtcgcgttttgaataattgtgtattcgaataaaaatta 18309214  T
Q  166 attaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  18309213 attaaatctaacgtgaattcaactaattaaaattgcgtaat 18309173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 3602396 - 3602257
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||| |||||||||||||||| ||| |||||| |||||    
T  3602396 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgcgttttgaataattgtgtattctaataaaaactaa 3602297  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| |||||||| | ||||||||||||||||||    
T  3602296 ttaaatctaatgtgaattcaactaattaaaattgcgtaat 3602257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 34683084 - 34683223
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| |||||||| ||| |||  ||||||||||||||||||||| ||||||||||||| || || ||||||| |||||    
T  34683084 acattttgtttgacattatggtacttagaataaaattgcatttgaaataatttcgattaaagtcgcgttttgaataattgcgtatttgaataaaaactaa 34683183  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  34683184 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 34683223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 1695801 - 1695699
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||  ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  1695801 gcgttttgaataatttcgattaaagtcgtgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgt 1695702  T
Q  204 aat 206  Q
    |||    
T  1695701 aat 1695699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 1972371 - 1972276
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  1972371 gaataatttcgattaaagtcgcgtttcgaataattgtgtattcgaataaaaactaattaaatctaatgtgaattcaactaattaaaattgcgtaat 1972276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 6792675 - 6792770
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||| ||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  6792675 gaataatttcgattaaagtcgcgtttcgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 6792770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 201
Target Start/End: Complemental strand, 35566323 - 35566189
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  |||| |||||||| ||| ||||||||   | ||| ||||||||||||||||||| || ||||||||||||| || |||||||||| |||||    
T  35566323 acattttgtttgatattatggtacttagaataaaatcacatttggaataatttcgattaaagttgcgttttgaataattgcgtattcgaataaaaactaa 35566224  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgc 201  Q
    ||||||||||||||||||| | |||||||||||||    
T  35566223 ttaaatctaacgtgaattcaactaattaaaattgc 35566189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 25499133 - 25498995
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||| ||| ||| ||||||||  || |||  ||||||||||||||||||||  ||||||||||||| || |||||||||| |||||    
T  25499133 acattttgtttgacattacggtacttagaataaaatcgcatttgaaataatttcgattaaagtcgatttttgaataattgcgtattcgaataaaaactaa 25499034  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||| ||||||||||||||    
T  25499033 ttaaatctaacgtgaattcaactaa-taaaattgcgtaat 25498995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 36349531 - 36349631
Alignment:
Q  106 gttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaa 205  Q
    ||||||| ||||||||||||||||| | |||||||||| || || |||||||||| | |||||||||||||||||||||| | |||||||||||||||||    
T  36349531 gttttgagtaatttcgattaaagtcacgttttgaataagtgcgtattcgaataaaaattaattaaatctaacgtgaattcaactaattaaaattgcgtaa 36349630  T
Q  206 t 206  Q
    |    
T  36349631 t 36349631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 20197129 - 20196990
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| |||| |||||||| || || |||||||   |||    
T  20197129 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttaaataattgcgtatttgaataaaatttaa 20197030  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||| ||||||| |||||| | ||||||||||||||||||    
T  20197029 ttaactctaacgggaattcaactaattaaaattgcgtaat 20196990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 1399467 - 1399598
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcatttt-gaataattgtgtgttcgaataaagactaattaaatct 174  Q
    ||||||||||||| ||| ||||||||  |  ||| ||||||||| | |||||||| | |||| | |||||||||| |||||||||| |||||||||||||    
T  1399467 ttgacattatggtacttagaataaaatcgtatttggaataattttgcttaaagtcacgtttttgcataattgtgtattcgaataaaaactaattaaatct 1399566  T
Q  175 aacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||| | |||||||||||| |||||    
T  1399567 aacgtgaattcaactaattaaaattgtgtaat 1399598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 7484701 - 7484800
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttg----aataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaatt 199  Q
    ||||||||||||||||||||||||||||| |||||    |||||||| || |||||||||| |||||||||||||||||||| ||| | |||||||||||    
T  7484701 gcgttttgaataatttcgattaaagtcgcgttttgtttgaataattgcgtattcgaataaaaactaattaaatctaacgtgagttcaagtaattaaaatt 7484800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 1695866 - 1695787
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  | |||||||||||||||| |||||| |||| ||||||||||||    
T  1695866 tacattttgcttgacatattggtactttgaataaattttcgttttgaataatttcaattaaaatcgcgttttgaataatt 1695787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 6792603 - 6792682
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   ||||||||||||||||| |||||| |||||||| ||||||||    
T  6792603 tacattttgcttgacatattggtactttgaataaattcgcgttttgaataatttcaattaaaatcgcatttggaataatt 6792682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 35927236 - 35927300
Alignment:
Q  68 cattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgc 132  Q
    |||||| |||| ||||||||| ||||||||||||  |||||||||||||||||| ||||| ||||    
T  35927236 cattttgcttgtcattatggtactttgaataaaatcgcgttttgaataatttcggttaaaatcgc 35927300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 1972443 - 1972364
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||   || |||||||||||||| |||||| |||||||| ||||||||    
T  1972443 tacattttgcttgacatattggtactttgaataaattcgcattttgaataatttcaattaaaatcgcatttggaataatt 1972364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 7484636 - 7484715
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  | |||||| ||||||||| |||||| |||| ||||||||||||    
T  7484636 tacattttgcttgacatattggtactttgaataaatttacgttttaaataatttcaattaaaatcgcgttttgaataatt 7484715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 8538909 - 8538783
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| | |  ||||||| ||| ||| ||||||||| |||||||||||| ||||||||             |||||| | |||    
T  8538909 acattttgtttgacattatggtacataaaataaaattgcatttggaataattttgattaaagtcgcgttttgaat-------------aataaaaattaa 8538823  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  8538822 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 8538783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 11347733 - 11347656
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataat 144  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||| || |||||||||||| |||||||||||    
T  11347733 acattttgtttgacattatggtacttagaataaaatcgcatttggaataactttgattaaagtcgcgttttgaataat 11347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 35927354 - 35927391
Alignment:
Q  154 gaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  35927354 gaataaagactaattaagtctaacgtgaattcgaataa 35927391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 24118476 - 24118573
Alignment:
Q  246 acctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaaattttccctccactaatatgcctcttttgaaattgaaat 343  Q
    |||||||||||||||||| | | ||  ||||||||| || | ||| | ||||| |||||||||||||||| ||  |||||||  ||||||||| ||||    
T  24118476 acctaatttttccctctaataaaccttcattaattgctaatggtcccttaaccttacaaattttccctcctcttctatgcctaatttgaaattcaaat 24118573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 9e-35; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 21186450 - 21186589
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  |||||||||| || ||| ||||||||  || ||| |||||||||||||||||||| | ||||||||||||| || |||||||||| |||||    
T  21186450 acattttgtttgacattatagtacttagaataaaatcgcatttggaataatttcgattaaagtcacgttttgaataattgcgtattcgaataaaaactaa 21186549  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  21186550 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 21186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 79 - 206
Target Start/End: Complemental strand, 41623122 - 41622995
Alignment:
Q  79 acattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacg 178  Q
    |||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||||| |    
T  41623122 acattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaaag 41623023  T
Q  179 tgaattcgaataattaaaattgcgtaat 206  Q
    ||||||| | ||||||||||||||||||    
T  41623022 tgaattcaactaattaaaattgcgtaat 41622995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 42683456 - 42683317
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||| | ||| ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || |||||||||| |||||    
T  42683456 acattttgtttgacattatgttacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 42683357  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| |||||||| | ||||||||||||||||||    
T  42683356 ttaaatctaatgtgaattcaactaattaaaattgcgtaat 42683317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 46861350 - 46861489
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||||||||||||| || ||||||||||||| || |||||||||| |||||    
T  46861350 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagttgcgttttgaataattgcgtattcgaataaaaactaa 46861449  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||| ||||||    
T  46861450 ttaaatctaacgtgaattcaactaattaaaattacgtaat 46861489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 28113592 - 28113692
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| | |||||||||||||||||||||| ||||||||| |||||||    
T  28113592 gcgttttgaataatttcgattaaagtcgcgttttgaacaattgtgtattcgaataaaaaataattaaatctaacgtgaattcaaataattaatattgcgt 28113691  T
Q  204 a 204  Q
    |    
T  28113692 a 28113692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 105 - 204
Target Start/End: Original strand, 15900636 - 15900735
Alignment:
Q  105 cgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    |||||||||||||||||||||||||||| ||||||||| ||| || ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  15900636 cgttttgaataatttcgattaaagtcgcgttttgaatatttgcgtattcaaataaaaactaattaaatctaacgtgaattcaaataattaaaattgcgta 15900735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 36392976 - 36393115
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||| | ||||||||||||| || |||||||||| |||||    
T  36392976 acattttgtttgacattatggtacttagaataaaatcgcatttgtaataatttcgattaaagtcacgttttgaataattgcgtattcgaataaaaactaa 36393075  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | |||||||||||| |||||    
T  36393076 ttaaatctaacgtgaattcaactaattaaaattgtgtaat 36393115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 34141895 - 34141765
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| |||  |||| ||  || ||| |||||||||||||||||||||| ||||||| ||||| || |||||||||| ||||||||||||||    
T  34141895 ttgacattatggtacttataatacaatcgcatttggaataatttcgattaaagtcgcgttttgaacaattgcgtattcgaataaaaactaattaaatcta 34141796  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||||||||    
T  34141795 acgtgaattcaactaattaaaattgcgtaat 34141765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 10225078 - 10224983
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||||||||||||| || ||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  10225078 gaataatttcgattaaagtcgcgttttgaataattgcgtattcaaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 10224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 30353997 - 30354136
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||   | ||| |||||||||||||||||||| | ||||||||||||| || |||||||||| |||||    
T  30353997 acattttgtttgacattatggtacttagaataaaatcacatttggaataatttcgattaaagtcacgttttgaataattgcgtattcgaataaaaactaa 30354096  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| ||| |||||||| | ||||||||||||||||||    
T  30354097 ttaaatttaatgtgaattcaactaattaaaattgcgtaat 30354136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 42735973 - 42735878
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  42735973 gaataatttcgattaaagtcgcgttttgaataattgcgtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgggtaat 42735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 22291847 - 22291745
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    |||||||||||||||| ||||||| |||||||||||||||||| || |||||||||| ||||||||||| |||| ||||||| | |||||||||||||||    
T  22291847 gcgttttgaataattttgattaaaatcgcattttgaataattgcgtattcgaataaaaactaattaaatataacatgaattcaactaattaaaattgcgt 22291748  T
Q  204 aat 206  Q
    |||    
T  22291747 aat 22291745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 48271704 - 48271566
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||||| ||||||||||||| || | |||||||| |||||    
T  48271704 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaagtcgcgttttgaataattgcgtatccgaataaaaactaa 48271605  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaa 205  Q
    ||||||||||| ||||||| | |||||||||||| ||||    
T  48271604 ttaaatctaacatgaattcaactaattaaaattgtgtaa 48271566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 43350605 - 43350697
Alignment:
Q  114 taatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| |||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  43350605 taattttgattaaagtcgcgttttgaataattgagtattcgaataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 43350697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 20877253 - 20877352
Alignment:
Q  107 ttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||||||  ||||||||||||| || || ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  20877253 ttttgaataatttcgattaaagtcgtgttttgaataattgcgtatttgaataaaaactaattaattctaacgtgaattcaactaattaaaattgcgtaat 20877352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 45362450 - 45362577
Alignment:
Q  79 acattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacg 178  Q
    ||||||||||  || ||||||||  || ||| ||| |||||||||||||||||| |||| |||||||| || |||||||||| |||||||||||||||||    
T  45362450 acattatggtatttagaataaaatcgcatttggaagaatttcgattaaagtcgcgtttttaataattgcgtattcgaataaaaactaattaaatctaacg 45362549  T
Q  179 tgaattcgaataattaaaattgcgtaat 206  Q
    ||||| | | ||||||||||||||||||    
T  45362550 tgaatccaactaattaaaattgcgtaat 45362577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 17184201 - 17184099
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || || |||| || || ||| ||||||||||||||||| | |||||||||||||||    
T  17184201 gcgttttgaataatttcgattaaagtcgcgttttgaataattgcgtattggaattaaaacaaatcaaatctaacgtgaattcaactaattaaaattgcgt 17184102  T
Q  204 aat 206  Q
    |||    
T  17184101 aat 17184099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 28978388 - 28978526
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  |||||||||| |||||||||| ||||||| ||||| || ||| |||||| |||||    
T  28978388 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttcggttaaagtcgcgttttgaaaaattgcgtattcaaataaaaactaa 28978487  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaa 205  Q
    ||||||||||||||||||| | |||||||||||| ||||    
T  28978488 ttaaatctaacgtgaattcaactaattaaaattgtgtaa 28978526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 40589575 - 40589436
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||| ||||||||||| | |||| |||||||| || || ||||||| |||||    
T  40589575 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattccgattaaagtcacgtttttaataattgcgtatttgaataaaaactaa 40589476  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||   | ||||||||||||||||||    
T  40589475 ttaaatctaacgtgaatctaactaattaaaattgcgtaat 40589436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 1641830 - 1641988
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaat---- 141  Q
    ||||||||||| |||| ||||||||||| || || |||||||| ||||||||||||   ||||||||||||||||||||||||| || | ||||||        
T  1641830 atatgtcgcgcgcattgtgctacattttgctagatattatggtactttgaataaaatcacgttttgaataatttcgattaaagttgcgtattgaataatt 1641929  T
Q  142 ---------aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
             ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  1641930 tctattaaaaattgcgtattcgaataaagactaattaaatctaacgtgaattcgaataa 1641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 48194029 - 48193890
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||||||| |||||||| |||| |||||||| || || ||||||| | |||    
T  48194029 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgatcaaagtcgcgtttttaataattgcgtatttgaataaaaattaa 48193930  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||| |   | ||||||||||||||||||    
T  48193929 ttaaatctaacgtgactctaactaattaaaattgcgtaat 48193890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 4230533 - 4230437
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaata 142  Q
    |||||||| || ||||||| |||||||| |||||||||||||| |||||||||||   |||| |||| |||||||||||||| |||| | |||||||    
T  4230533 atatgtcgtgcgcattttggtacattttgcttgacattatggtactttgaataaagtcgcgtattgagtaatttcgattaaaatcgcgtgttgaata 4230437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 15900588 - 15900649
Alignment:
Q  85 tggtgctttgaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||  | ||||||||||||    
T  15900588 tggtgctttgaataaaaatcgtgttttgaataatttcgattaaagttacgttttgaataatt 15900649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 39266908 - 39266804
Alignment:
Q  210 ttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaaatttt 309  Q
    |||||||||||||||||||| |  |||||||| |  |||||||||||||||||| | ||||  ||||||||| || | ||||| ||| |||| |||||||    
T  39266908 ttattctaaatgcttattaggtcttgctatcatttaacctaatttttccctctaataatccttcattaattgctaatggtcacttaagccta-aaatttt 39266810  T
Q  310 ccctcc 315  Q
    ||||||    
T  39266809 ccctcc 39266804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 17184266 - 17184187
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||  | |||||| ||||||||| |||||| |||| ||||||||||||    
T  17184266 tacattttgcttgacatattggtactttgaataaattttcgttttaaataatttcaattaaaatcgcgttttgaataatt 17184187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 20877185 - 20877264
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| |||||| |  |||| |||||||||||   || |||||||||||||| |||||| |||||||||||||||||    
T  20877185 tacattttgcttgacttattggtactttgaataaattcgcattttgaataatttcaattaaaatcgcattttgaataatt 20877264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 42736045 - 42735966
Alignment:
Q  66 tacattttccttgacattatggtg-ctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| |||||||| ||| || |||||||||||  |||||||||||||||||  |||||| |||||||| ||||||||    
T  42736045 tacattttgcttgacat-atgatgactttgaataaatttgcgttttgaataattttaattaaaatcgcatttggaataatt 42735966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 22291912 - 22291833
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| ||| |||||||  |||||||| ||||||||| | |||| |||| ||||||||||||    
T  22291912 tacatttttcttgacatattggtacttcgaataaatttgcgttttaaataatttcaactaaaatcgcgttttgaataatt 22291833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 15337349 - 15337398
Alignment:
Q  154 gaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||| |||||||||||||||| ||||||||||||   |||||||||||||    
T  15337349 gaataaatactaattaaatctaacctgaattcgaata---aaaattgcgtaat 15337398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 9e-35; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 13617055 - 13617194
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||||| ||||||||||||| || || ||||||| |||||    
T  13617055 acattttgtttgacattatggtacttagaataaaatcgcatttggaataatttcgattaaagtcgcgttttgaataattgcgtattggaataaaaactaa 13617154  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||| ||||    
T  13617155 ttaaatctaacgtgaattcaactaattaaaattgcataat 13617194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 46 - 159
Target Start/End: Complemental strand, 14123767 - 14123652
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgc-tttgaataaaaat-gcgttttgaataatttcgattaaagtcgcattttgaataa 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||| | ||||||||||    
T  14123767 atatgtcgcgcacattttgctacattttccttgacattatggtgcttttgaataaaaatcgtgttttgaataatttcaattaaagtcccgttttgaataa 14123668  T
Q  144 ttgtgtgttcgaataa 159  Q
    ||| || |||||||||    
T  14123667 ttgcgtattcgaataa 14123652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 34802340 - 34802479
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||  || |||  ||||||||| ||||||||||| ||||||||||||| || |||||||||| |||||    
T  34802340 acattttgtttgacattatggtacttagaataaaatcgcatttgaaataatttctattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 34802439  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  34802440 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 34802479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 13403854 - 13403724
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| ||| ||||||||  || |||  ||||||||||||||||||||| |||||||||||||  | |||||||||| ||||||||||||||    
T  13403854 ttgacattatggtacttagaataaaatcgcatttgaaataatttcgattaaagtcgcgttttgaataattgcatattcgaataaaaactaattaaatcta 13403755  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | |||||||||||| |||||    
T  13403754 acgtgaattcaactaattaaaattgtgtaat 13403724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 32026779 - 32026918
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||   | ||| ||||||||| |||||||||||| |||||||||||||  | || ||||||| |||||    
T  32026779 acattttgtttgacattatggtacttagaataaaatcacatttggaataattttgattaaagtcgcgttttgaataattgcatatttgaataaaaactaa 32026878  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  32026879 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 32026918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 32036838 - 32036977
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| ||| ||||||||   | ||| ||||||||| |||||||||||| |||||||||||||  | || ||||||| |||||    
T  32036838 acattttgtttgacattatggtacttagaataaaatcacatttggaataattttgattaaagtcgcgttttgaataattgcatatttgaataaaaactaa 32036937  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  32036938 ttaaatctaacgtgaattcaactaattaaaattgcgtaat 32036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 29067538 - 29067398
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaat-aaagacta 165  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||||||||||| |||| |||| |||||||| || ||||||| ||| | ||    
T  29067538 acattttgtttgacattatggtacttggaataaaatcgcatttggaataatttcgattaaactcgcgtttttaataattgcgtattcgaataaaaaatta 29067439  T
Q  166 attaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||| | | ||||||||||||||||||    
T  29067438 attaaatctaacgtgaatccaactaattaaaattgcgtaat 29067398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 12397797 - 12397695
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgt 203  Q
    ||||||||||||||||||||||||||||| |||||||||||||  | |||||||||| ||||| ||||||||| || ||||| | |||||||||||| ||    
T  12397797 gcgttttgaataatttcgattaaagtcgcgttttgaataattgcatattcgaataaaaactaactaaatctaatgtaaattcaactaattaaaattgtgt 12397698  T
Q  204 aat 206  Q
    |||    
T  12397697 aat 12397695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 35020410 - 35020548
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||||| | | ||||||||  || |||  |||||||| ||||||||||||||||||||||| || || ||||||||||  || |    
T  35020410 acattttgtttgacattatggtacctagaataaaatcgcatttgcaataattttgattaaagtcgcattttgaataa-tgcgtattcgaataaaatctta 35020508  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||||||||| | | ||||||||||||||||||    
T  35020509 ttaaatctaacgtgaatccaactaattaaaattgcgtaat 35020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 34704051 - 34704164
Alignment:
Q  205 atcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaattgttattagtcacctaaccctacaa 304  Q
    |||| |||||||||||||||||||| |  |||||  |||| |||||||||||||||||| ||||| |||||||||||| ||||||||| | |  |||||     
T  34704051 atcccttattctaaatgcttattaggtcttgctactactaaacctaatttttccctctaattatctagcattaattgtaattagtcactttaggctacat 34704150  T
Q  305 attttccctccact 318  Q
    ||||||||||||||    
T  34704151 attttccctccact 34704164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 29109127 - 29108985
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaat---aaagac 163  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||||||||||| |||| |||| |||||||| || ||||||    ||| |     
T  29109127 acattttgtttgacattatggtacttggaataaaatcgcatttggaataatttcgattaaactcgcgtttttaataattgcgtattcgaaataaaaaaat 29109028  T
Q  164 taattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||| | | ||||||||||||||||||    
T  29109027 taattaaatctaacgtgaatccaactaattaaaattgcgtaat 29108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 4495910 - 4495857
Alignment:
Q  151 ttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4495910 ttcgaataaaaactaattaaatctaacgtgaattcaaataattaaaattgcgta 4495857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 7821543 - 7821491
Alignment:
Q  154 gaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  7821543 gaataaatactgattaaatctaacgtgaattcaaataattaaaattgcgtaat 7821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 4495865 - 4495803
Alignment:
Q  142 aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgta 204  Q
    ||||| || |||||||||| | |||||||||||||||||||| | ||||||||||||||||||    
T  4495865 aattgcgtattcgaataaaaattaattaaatctaacgtgaatgcaaataattaaaattgcgta 4495803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 528
Target Start/End: Original strand, 34704302 - 34704366
Alignment:
Q  464 ccacttctccatattgtttctgtttccaacacaaccattataccttcacttatgaactatgtata 528  Q
    |||||||||||| |||||||||||||||||||| |  |||| |||||| ||||||||||| ||||    
T  34704302 ccacttctccatgttgtttctgtttccaacacatctcttattccttcagttatgaactatatata 34704366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 18332601 - 18332527
Alignment:
Q  204 aatcctttattctaaatgcttattagatgatgctatcactagacctaatttttccctctatttatccagcattaa 278  Q
    ||||||||||||||||||||||||| || |||| | || ||  ||||||||||||||||| ||||| | ||||||    
T  18332601 aatcctttattctaaatgcttattaaatcatgcaaccattaaccctaatttttccctctaattatctatcattaa 18332527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 4495996 - 4495947
Alignment:
Q  151 ttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattg 200  Q
    |||||||||| | |||||||||||||||| ||||| ||||||||||||||    
T  4495996 ttcgaataaaaattaattaaatctaacgtaaattcaaataattaaaattg 4495947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 4495951 - 4495902
Alignment:
Q  142 aattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataa 191  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||||||||    
T  4495951 aattgtttattcgaataaaaattaattaattctaacgtgaattcgaataa 4495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 20241512 - 20241585
Alignment:
Q  58 cattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcg 131  Q
    ||||||| || |||||  ||||||||| ||| |||||||||||    ||| |||||||||||||||||||||||    
T  20241512 cattttggtatattttggttgacattaaggtactttgaataaagtcacgtattgaataatttcgattaaagtcg 20241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 20241612 - 20241653
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||| |||||||||||||||||||||||| | ||||||||||    
T  20241612 gcgtattgaataatttcgattaaagtcgcgtattgaataatt 20241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 22135496 - 22135569
Alignment:
Q  58 cattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcg 131  Q
    ||||||| || |||||  ||||||||| ||| |||||||||||    ||| |||||||||||||||||||||||    
T  22135496 cattttggtatattttggttgacattaaggtactttgaataaagtcacgtattgaataatttcgattaaagtcg 22135569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 22135596 - 22135637
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||| |||||||||||||||||||||||| | ||||||||||    
T  22135596 gcgtattgaataatttcgattaaagtcgcgtattgaataatt 22135637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 22142849 - 22142922
Alignment:
Q  58 cattttgctacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcg 131  Q
    ||||||| || |||||  ||||||||| ||| |||||||||||    ||| |||||||||||||||||||||||    
T  22142849 cattttggtatattttggttgacattaaggtactttgaataaagtcacgtattgaataatttcgattaaagtcg 22142922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 22142949 - 22142990
Alignment:
Q  104 gcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||| |||||||||||||||||||||||| | ||||||||||    
T  22142949 gcgtattgaataatttcgattaaagtcgcgtattgaataatt 22142990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 2820 - 2690
Alignment:
Q  76 ttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatcta 175  Q
    ||||||||||||| |||  |||| ||  || ||| |||||||||||||||||||||| ||||||| ||||| || |||||||||| ||||||||||||||    
T  2820 ttgacattatggtacttataatacaatcgcatttggaataatttcgattaaagtcgcgttttgaacaattgcgtattcgaataaaaactaattaaatcta 2721  T
Q  176 acgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||| | ||||||||||||||||||    
T  2720 acgtgaattcaactaattaaaattgcgtaat 2690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 17111 - 17251
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaat-aaagacta 165  Q
    |||||||  ||||||||||||| ||| ||||||||  || ||| ||||||||| |||||||||||||||||||||||||| || || |||| ||| ||||    
T  17111 acattttgtttgacattatggtacttagaataaaatcgcatttggaataattttgattaaagtcgcattttgaataattgcgtatttgaataaaaaacta 17210  T
Q  166 attaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||||||||||| |||||||| | ||||||||||||||||||    
T  17211 attaaatctaatgtgaattcaactaattaaaattgcgtaat 17251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 4720 - 4859
Alignment:
Q  67 acattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaa 166  Q
    |||||||  ||||||||||| | ||| ||||||||  |  ||| |||||||||| ||||||||||| ||||||||||||| || |||||||||| |||||    
T  4720 acattttgtttgacattatgttacttagaataaaatcgtatttggaataatttctattaaagtcgcgttttgaataattgcgtattcgaataaaaactaa 4819  T
Q  167 ttaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    ||| ||||||||||||||| | |||||||||||| |||||    
T  4820 ttagatctaacgtgaattcaactaattaaaattgtgtaat 4859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 5284 - 5189
Alignment:
Q  111 gaataatttcgattaaagtcgcattttgaataattgtgtgttcgaataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||||||||||||||||||| ||| ||||||||| || |||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  5284 gaataatttcgattaaagtcgcgtttcgaataattgcgtattcgaataaaaactaattaaatctaatgtgaattcaactaattaaaattgcgtaat 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 5356 - 5277
Alignment:
Q  66 tacattttccttgacattatggtgctttgaataaaaatgcgttttgaataatttcgattaaagtcgcattttgaataatt 145  Q
    |||||||| ||||||||  |||| |||||||||||    |||||||| ||||||| |||||| |||||||| ||||||||    
T  5356 tacattttgcttgacatattggtactttgaataaattcacgttttgattaatttcaattaaaatcgcatttggaataatt 5277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 11019 - 11070
Alignment:
Q  155 aataaagactaattaaatctaacgtgaattcgaataattaaaattgcgtaat 206  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  11019 aataaaaactaattaaatctaacgtgaattcaactaattaaaattgcgtaat 11070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 1394 - 1340
Alignment:
Q  46 atatgtcgcgcacattttgctacattttccttgacattatggtgctttgaataaa 100  Q
    ||||||||||| ||||||| |||||||| ||||||||| |||| |||||||||||    
T  1394 atatgtcgcgcgcattttggtacatttttcttgacattttggtactttgaataaa 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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