View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13081_high_10 (Length: 215)

Name: NF13081_high_10
Description: NF13081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13081_high_10
NF13081_high_10
[»] chr5 (4 HSPs)
chr5 (85-201)||(34657610-34657726)
chr5 (1-77)||(20933583-20933659)
chr5 (1-85)||(19184021-19184103)
chr5 (5-85)||(34657770-34657850)
[»] chr4 (5 HSPs)
chr4 (85-201)||(11164640-11164756)
chr4 (1-77)||(14224192-14224268)
chr4 (1-77)||(14234287-14234363)
chr4 (5-85)||(11164802-11164882)
chr4 (1-72)||(16636330-16636401)
[»] chr7 (6 HSPs)
chr7 (85-201)||(15941544-15941660)
chr7 (85-201)||(15933202-15933318)
chr7 (1-85)||(7159407-7159491)
chr7 (5-85)||(15941706-15941786)
chr7 (5-85)||(15933363-15933443)
chr7 (5-77)||(22074494-22074565)
[»] chr1 (5 HSPs)
chr1 (1-81)||(18477205-18477285)
chr1 (1-81)||(18487301-18487381)
chr1 (87-154)||(18477338-18477409)
chr1 (87-154)||(18487434-18487505)
chr1 (1-65)||(7588595-7588658)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-85)||(32902-32986)
[»] chr3 (3 HSPs)
chr3 (1-77)||(11177092-11177168)
chr3 (6-77)||(11296411-11296482)
chr3 (42-84)||(23047280-23047322)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-81)||(186831-186911)
[»] scaffold0035 (4 HSPs)
scaffold0035 (1-81)||(87353-87433)
scaffold0035 (1-81)||(97047-97127)
scaffold0035 (102-157)||(87505-87560)
scaffold0035 (102-157)||(97199-97254)
[»] scaffold1407 (1 HSPs)
scaffold1407 (1-77)||(846-922)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-85)||(12243-12327)
[»] chr8 (2 HSPs)
chr8 (1-77)||(19901114-19901189)
chr8 (1-77)||(18294348-18294424)
[»] scaffold0158 (2 HSPs)
scaffold0158 (1-79)||(28245-28323)
scaffold0158 (1-79)||(35967-36045)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-85)||(76346-76430)
scaffold0029 (1-85)||(88071-88155)
[»] scaffold0226 (1 HSPs)
scaffold0226 (4-77)||(4280-4353)
[»] chr2 (1 HSPs)
chr2 (1-77)||(28386745-28386821)
[»] scaffold0059 (1 HSPs)
scaffold0059 (5-81)||(38495-38571)
[»] scaffold0334 (1 HSPs)
scaffold0334 (2-64)||(16906-16968)
[»] chr6 (1 HSPs)
chr6 (5-81)||(7960215-7960291)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-85)||(5253-5337)


Alignment Details
Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 34657726 - 34657610
Alignment:
Q  85 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaaggccacggcaacagaacagaagtgcag 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34657726 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatgggtactttcaattataagaaaaaggccacggcaacagaacagaagtgcag 34657627  T
Q  185 caacaatatgaagtaac 201  Q
    |||||||||||||||||    
T  34657626 caacaatatgaagtaac 34657610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20933583 - 20933659
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  20933583 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatggaaatctagtcggacat 20933659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19184103 - 19184021
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||    
T  19184103 taatcatacaacttaacagagcaccattggtacgacattcatcacattccggactc--tggaaatctactcggacatggtaatta 19184021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 34657850 - 34657770
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||| ||||||||| |  || |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34657850 catacaacttaacagagtattatcggtacgacgttcgtcacattccggactctataaaaatctactcagacatggtaatta 34657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 11164756 - 11164640
Alignment:
Q  85 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaaggccacggcaacagaacagaagtgcag 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11164756 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatgggtactttcaattataagaaaaaggccacggcaacagaacagaagtgcag 11164657  T
Q  185 caacaatatgaagtaac 201  Q
    |||||||||||||||||    
T  11164656 caacaatatgaagtaac 11164640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14224268 - 14224192
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14224268 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatggaaatctactcagacat 14224192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14234363 - 14234287
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14234363 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatggaaatctactcagacat 14234287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 11164882 - 11164802
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||| ||||||||| | |||  ||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||    
T  11164882 catacaacttaacagagtatcatcagtacgacattcgtcacattccagaccctatggaaatctactcagacatggtaatta 11164802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16636401 - 16636330
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactca 72  Q
    ||||||||||| |||||| |  | |||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  16636401 taatcatacaacttaacatattatcattcgtacgacgttcatcacattccggactctataaaaatctactca 16636330  T

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Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 15941660 - 15941544
Alignment:
Q  85 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaaggccacggcaacagaacagaagtgcag 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  15941660 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaaggccatggcaatagaacagaagtgcag 15941561  T
Q  185 caacaatatgaagtaac 201  Q
    |||||| ||||||||||    
T  15941560 caacaagatgaagtaac 15941544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 15933318 - 15933202
Alignment:
Q  85 agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaaggccacggcaacagaacagaagtgcag 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  15933318 agaaattaaaagaacaaaatgaatgagcagaaactaacctattaatgatggatactttcaattataagaaaaaggccacagcaacagaacagaagtgcaa 15933219  T
Q  185 caacaatatgaagtaac 201  Q
    |||||| ||||||||||    
T  15933218 caacaagatgaagtaac 15933202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7159491 - 7159407
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||    
T  7159491 taatcatacaatttaacagagtaccattggtacgacattcatcacattccgaactatatggaaatctactcaaacatggtaatta 7159407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 15941786 - 15941706
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||| ||||||||| | ||| |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  15941786 catacaacttaacagagtatcatcggtacgacgttcgtcacattccggactctataaaaatctactcagacatggtaatta 15941706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 15933443 - 15933363
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||| ||||||||| | ||| |||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  15933443 catacaacttaacagagtatcatcggtacgacgttcgtcacattccggactctataaaaatctacgcagacatggtaatta 15933363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 22074565 - 22074494
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||| |||| ||||||||||||||| |||||| ||||| |||||| | |||||||||| ||||||    
T  22074565 catacaaattaaaagagtaccattggtacgacaatcatcatattcccgactctgt-aaaatctacttagacat 22074494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18477205 - 18477285
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18477205 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 18477285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18487301 - 18487381
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18487301 taatcatacaaattaacagagcaccgttggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 18487381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 18477338 - 18477409
Alignment:
Q  87 aaattaaaagaacaaaatg----aatgagcagaaactaacctgttaatgatggatactttcaattataagaa 154  Q
    |||||||||||||||||||    |||||||| ||||||||||||| || |||| | ||||||||||||||||    
T  18477338 aaattaaaagaacaaaatgaatgaatgagcataaactaacctgtttataatgggtgctttcaattataagaa 18477409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 18487434 - 18487505
Alignment:
Q  87 aaattaaaagaacaaaatg----aatgagcagaaactaacctgttaatgatggatactttcaattataagaa 154  Q
    |||||||||||||||||||    |||||||| ||||||||||||| || |||| | ||||||||||||||||    
T  18487434 aaattaaaagaacaaaatgaatgaatgagcataaactaacctgtttataatgggtgctttcaattataagaa 18487505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7588595 - 7588658
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaat 65  Q
    ||||||||||| |||||| || |||||||||||||  ||||||| |||||||||||||| |||||    
T  7588595 taatcatacaatttaaca-agtaccattggtacgaggttcatcatattccggactctataaaaat 7588658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32986 - 32902
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32986 taatcatacaaattaacagagcaccattggtacaacattcatcacattccggactctataaaaatctactcagacatggtaatta 32902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 6e-36; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11177092 - 11177168
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11177092 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 11177168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 11296411 - 11296482
Alignment:
Q  6 atacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||| ||||||    
T  11296411 atacaaattaacagagcatcattggtacggcattcatcatattccggactctataaaaatctactaagacat 11296482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 23047322 - 23047280
Alignment:
Q  42 tcacattccggactctatgaaaatctactcagacatggtaatt 84  Q
    |||||||||||||||||| ||||| |||||| |||||||||||    
T  23047322 tcacattccggactctataaaaatgtactcaaacatggtaatt 23047280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 186911 - 186831
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  186911 taatcatacaaattaacagagcaccattggtacaacattcatcacattccggactctatggaaatctactcagacatggta 186831  T

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Target: scaffold0035 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 87353 - 87433
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  87353 taattatacaaattaacagagcaccattggtacgacattcatcacatttcgaactctatgaaaatctactcagacatggta 87433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 97047 - 97127
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  97047 taattatacaaattaacagagcaccattggtacgacattcatcacatttcgaactctatgaaaatctactcagacatggta 97127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 87505 - 87560
Alignment:
Q  102 aatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaa 157  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||| ||| |||||    
T  87505 aatgaatgagcagaaactaacctgttgatgatgggtgctttcaattgtaaaaaaaa 87560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 97199 - 97254
Alignment:
Q  102 aatgaatgagcagaaactaacctgttaatgatggatactttcaattataagaaaaa 157  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||| ||| |||||    
T  97199 aatgaatgagcagaaactaacctgttgatgatgggtgctttcaattgtaaaaaaaa 97254  T

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Target: scaffold1407 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold1407
Description:

Target: scaffold1407; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 846 - 922
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  846 taatcatacaaattaacagagcatcattggtacgacattcatcacgttccggactttatgaaaatctactcagacat 922  T

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Target: scaffold0453 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12327 - 12243
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  12327 taatcatacaatttaacagagtactattggtacgacattcatcacattccggaccctatggaaatctactcagacatggtaatta 12243  T

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Target: chr8 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19901114 - 19901189
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  19901114 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatg-gaatctactcagacat 19901189  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18294348 - 18294424
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    ||||||||||| ||||||  | ||||||||||||||| |||||||||||| |||||||| |||||||||||| ||||    
T  18294348 taatcatacaacttaacaatgtaccattggtacgacaatcatcacattccagactctataaaaatctactcaaacat 18294424  T

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Target: scaffold0158 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28245 - 28323
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatgg 79  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  28245 taatcatacaaattaatagagcaccattggtacaacagtcatcacattccagactctatgaaaatctactcagacatgg 28323  T

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Target: scaffold0158; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35967 - 36045
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatgg 79  Q
    |||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  35967 taatcatgtaaattaacagagcaccattagtacaacattcatcacattccggactctatggaaatctactcaggcatgg 36045  T

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Target: scaffold0029 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 76346 - 76430
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||    
T  76346 taatcatacaatttaacagagtaccattggtacgacattcatcatattccagaccctatggaaatctactcagacatggtaatta 76430  T

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Target: scaffold0029; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 88071 - 88155
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  88071 taatcatacaatttaacagagtaccattggtacgacattcatcacattccagaccctatggaaatctactcacacatggtaatta 88155  T

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Target: scaffold0226 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 4353 - 4280
Alignment:
Q  4 tcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  4353 tcatacaaattaacagagcatcattggtacaacattcatcacattccggactctataaaaatctactctgacat 4280  T

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Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28386821 - 28386745
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat 77  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||    
T  28386821 taatcatacaaattaacagggcatcattggtgcgacattcatcatattccggactcaatggaaatctactcagacat 28386745  T

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Target: scaffold0059 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 38495 - 38571
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    ||||||| ||||||||| | |||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||    
T  38495 catacaacttaacagagtatcattggtacgacgttcatcatattccggactctatagaaatctactcagacatggta 38571  T

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Target: scaffold0334 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 16968 - 16906
Alignment:
Q  2 aatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaa 64  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  16968 aatcatacaatttaacagagtaccattggtacgacgttcatcacattccggactctataaaaa 16906  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 7960291 - 7960215
Alignment:
Q  5 catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta 81  Q
    ||||||| ||||||||| | |||||||||||| ||||||| ||||||||||||||  | || |||||||||||||||    
T  7960291 catacaacttaacagagtatcattggtacgacgttcatcatattccggactctatagagatatactcagacatggta 7960215  T

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Target: scaffold0267 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5253 - 5337
Alignment:
Q  1 taatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta 85  Q
    ||||||||||| ||||||||  | ||||| ||  || ||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  5253 taatcatacaacttaacagaatatcattgatagaacgttcatcatattccaaactctataaaaatctactcagacatggtaatta 5337  T

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