View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13081_high_11 (Length: 202)

Name: NF13081_high_11
Description: NF13081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13081_high_11
NF13081_high_11
[»] chr8 (28 HSPs)
chr8 (43-187)||(23122018-23122162)
chr8 (4-43)||(34470956-34470995)
chr8 (4-42)||(15048399-15048437)
chr8 (4-42)||(22763345-22763383)
chr8 (4-42)||(33296096-33296134)
chr8 (4-37)||(15048811-15048844)
chr8 (5-37)||(40660299-40660331)
chr8 (10-42)||(45077621-45077653)
chr8 (4-39)||(11174046-11174081)
chr8 (5-44)||(27473070-27473109)
chr8 (4-43)||(40659982-40660021)
chr8 (4-43)||(45077220-45077259)
chr8 (4-43)||(45276596-45276635)
chr8 (4-42)||(1646501-1646539)
chr8 (4-42)||(7535245-7535283)
chr8 (4-42)||(11920184-11920222)
chr8 (9-43)||(15872038-15872072)
chr8 (4-42)||(24666090-24666128)
chr8 (4-42)||(27473483-27473521)
chr8 (4-42)||(33819785-33819823)
chr8 (4-42)||(45277008-45277046)
chr8 (4-37)||(1651983-1652016)
chr8 (4-37)||(1740359-1740392)
chr8 (4-37)||(5434905-5434938)
chr8 (4-33)||(33295745-33295774)
chr8 (9-37)||(1739953-1739981)
chr8 (12-44)||(5435320-5435352)
chr8 (4-36)||(37569320-37569352)
[»] chr5 (15 HSPs)
chr5 (43-187)||(22630415-22630559)
chr5 (9-41)||(37424681-37424713)
chr5 (4-43)||(1140177-1140216)
chr5 (9-44)||(16860301-16860336)
chr5 (9-44)||(24040504-24040539)
chr5 (4-43)||(38958723-38958762)
chr5 (9-43)||(19128470-19128504)
chr5 (4-42)||(27186285-27186323)
chr5 (4-42)||(36440200-36440238)
chr5 (4-42)||(36440612-36440650)
chr5 (4-42)||(38959135-38959173)
chr5 (4-37)||(19184602-19184635)
chr5 (4-37)||(25183065-25183098)
chr5 (4-37)||(32288083-32288116)
chr5 (4-37)||(35569780-35569813)
[»] scaffold0186 (1 HSPs)
scaffold0186 (4-42)||(24162-24200)
[»] chr6 (31 HSPs)
chr6 (4-42)||(15932730-15932768)
chr6 (4-44)||(2517414-2517454)
chr6 (4-43)||(31238158-31238197)
chr6 (4-43)||(31247528-31247567)
chr6 (4-43)||(34518104-34518143)
chr6 (4-43)||(35167489-35167528)
chr6 (4-42)||(6235921-6235959)
chr6 (4-42)||(21856967-21857005)
chr6 (4-42)||(25180260-25180298)
chr6 (4-44)||(24744732-24744772)
chr6 (4-35)||(5311238-5311269)
chr6 (4-43)||(9046085-9046124)
chr6 (4-43)||(17244663-17244702)
chr6 (4-42)||(978415-978453)
chr6 (9-43)||(5310825-5310859)
chr6 (4-42)||(6137379-6137417)
chr6 (4-46)||(6137789-6137831)
chr6 (4-42)||(7438804-7438842)
chr6 (4-42)||(9046498-9046536)
chr6 (4-42)||(21856555-21856593)
chr6 (9-43)||(32753176-32753210)
chr6 (4-42)||(34517272-34517310)
chr6 (4-42)||(34890644-34890682)
chr6 (4-42)||(35167867-35167905)
chr6 (4-37)||(5937818-5937851)
chr6 (4-37)||(15932968-15933001)
chr6 (4-37)||(25176668-25176701)
chr6 (4-41)||(29260532-29260569)
chr6 (4-37)||(32753585-32753618)
chr6 (132-168)||(8847434-8847470)
chr6 (4-44)||(34994792-34994832)
[»] chr4 (39 HSPs)
chr4 (4-42)||(4513328-4513366)
chr4 (4-42)||(16038206-16038244)
chr4 (4-44)||(8398029-8398069)
chr4 (4-44)||(53994932-53994972)
chr4 (4-43)||(39448900-39448939)
chr4 (4-43)||(53751314-53751353)
chr4 (4-42)||(624091-624129)
chr4 (4-42)||(8591969-8592007)
chr4 (4-42)||(14985331-14985369)
chr4 (4-42)||(19088753-19088791)
chr4 (4-42)||(47603773-47603811)
chr4 (4-42)||(53995347-53995385)
chr4 (4-42)||(55022284-55022322)
chr4 (4-45)||(38339904-38339945)
chr4 (4-37)||(42855344-42855377)
chr4 (4-43)||(8592381-8592420)
chr4 (4-43)||(15478057-15478096)
chr4 (4-43)||(44991278-44991317)
chr4 (4-42)||(1433683-1433721)
chr4 (4-42)||(12817806-12817844)
chr4 (4-42)||(15477645-15477683)
chr4 (4-42)||(16037794-16037832)
chr4 (4-42)||(21763593-21763631)
chr4 (4-42)||(25182224-25182262)
chr4 (9-43)||(33091452-33091486)
chr4 (9-43)||(38339491-38339525)
chr4 (9-43)||(44957774-44957808)
chr4 (4-42)||(44991690-44991728)
chr4 (4-42)||(46849669-46849707)
chr4 (4-42)||(47602943-47602981)
chr4 (9-42)||(14985748-14985781)
chr4 (4-37)||(19088346-19088379)
chr4 (4-37)||(30683531-30683564)
chr4 (4-37)||(43734291-43734324)
chr4 (4-37)||(50769233-50769266)
chr4 (4-37)||(52557092-52557125)
chr4 (4-41)||(53259550-53259587)
chr4 (6-42)||(25181812-25181848)
chr4 (4-40)||(52557499-52557535)
[»] chr1 (34 HSPs)
chr1 (4-42)||(12481471-12481509)
chr1 (4-43)||(37576593-37576632)
chr1 (4-42)||(1763086-1763124)
chr1 (4-42)||(10831131-10831169)
chr1 (4-42)||(12127057-12127095)
chr1 (4-46)||(16023893-16023935)
chr1 (1-42)||(3089342-3089383)
chr1 (4-45)||(27548081-27548122)
chr1 (4-45)||(31704025-31704066)
chr1 (4-40)||(35612494-35612530)
chr1 (4-43)||(13109239-13109278)
chr1 (4-43)||(13183765-13183804)
chr1 (4-39)||(25995787-25995822)
chr1 (4-43)||(37467632-37467671)
chr1 (4-43)||(49140554-49140593)
chr1 (4-42)||(8760272-8760310)
chr1 (4-42)||(23476753-23476791)
chr1 (4-42)||(23598072-23598110)
chr1 (4-42)||(26723213-26723251)
chr1 (4-42)||(32047743-32047781)
chr1 (4-42)||(37304028-37304066)
chr1 (4-42)||(45053101-45053139)
chr1 (4-42)||(46593642-46593680)
chr1 (4-42)||(49140143-49140181)
chr1 (4-42)||(49644082-49644120)
chr1 (13-43)||(49837401-49837431)
chr1 (4-45)||(1762671-1762712)
chr1 (4-37)||(12481064-12481097)
chr1 (4-37)||(20306007-20306040)
chr1 (4-45)||(23476338-23476379)
chr1 (11-44)||(37576179-37576212)
chr1 (4-37)||(38000494-38000527)
chr1 (4-37)||(44323072-44323105)
chr1 (9-41)||(46592813-46592845)
[»] chr7 (29 HSPs)
chr7 (4-49)||(48626475-48626520)
chr7 (4-40)||(1114056-1114092)
chr7 (4-39)||(41453417-41453452)
chr7 (4-42)||(6356765-6356803)
chr7 (4-42)||(8416485-8416523)
chr7 (4-42)||(10526311-10526349)
chr7 (4-42)||(36423812-36423850)
chr7 (4-42)||(48626063-48626101)
chr7 (4-37)||(19681500-19681533)
chr7 (6-43)||(35146698-35146735)
chr7 (4-44)||(31638355-31638395)
chr7 (4-43)||(7578871-7578910)
chr7 (4-43)||(8417348-8417387)
chr7 (4-43)||(41891965-41892004)
chr7 (5-43)||(1114458-1114496)
chr7 (4-42)||(4155598-4155636)
chr7 (4-42)||(8542499-8542537)
chr7 (12-42)||(16867707-16867737)
chr7 (9-43)||(17749934-17749968)
chr7 (4-42)||(19681907-19681945)
chr7 (4-42)||(21391190-21391228)
chr7 (4-42)||(29277755-29277793)
chr7 (4-42)||(36674141-36674179)
chr7 (4-42)||(41453005-41453043)
chr7 (4-42)||(44332931-44332969)
chr7 (4-37)||(8542910-8542943)
chr7 (4-37)||(36673980-36674013)
chr7 (4-41)||(41192097-41192134)
chr7 (4-40)||(34037323-34037359)
[»] chr3 (45 HSPs)
chr3 (4-45)||(45307104-45307145)
chr3 (4-44)||(54108314-54108354)
chr3 (4-43)||(10506360-10506399)
chr3 (9-44)||(42591782-42591817)
chr3 (4-42)||(5900835-5900873)
chr3 (4-42)||(51509119-51509157)
chr3 (4-41)||(21969630-21969667)
chr3 (4-41)||(21992066-21992103)
chr3 (4-41)||(47669260-47669297)
chr3 (4-37)||(54752575-54752608)
chr3 (4-44)||(39664596-39664636)
chr3 (4-44)||(45306830-45306870)
chr3 (4-39)||(8474258-8474293)
chr3 (4-43)||(12791588-12791627)
chr3 (4-43)||(26318181-26318220)
chr3 (4-39)||(29818180-29818215)
chr3 (4-43)||(44317627-44317666)
chr3 (4-43)||(54752162-54752201)
chr3 (4-42)||(1994169-1994207)
chr3 (4-42)||(1999328-1999366)
chr3 (4-42)||(4757494-4757532)
chr3 (4-42)||(4757905-4757943)
chr3 (4-42)||(4773243-4773281)
chr3 (4-42)||(18464868-18464906)
chr3 (4-42)||(26318594-26318632)
chr3 (4-42)||(27801901-27801939)
chr3 (4-42)||(28986553-28986591)
chr3 (4-42)||(39664184-39664222)
chr3 (9-39)||(41835343-41835373)
chr3 (4-42)||(42592196-42592234)
chr3 (4-42)||(49528149-49528187)
chr3 (4-37)||(1994580-1994613)
chr3 (4-37)||(10505953-10505986)
chr3 (4-37)||(11256515-11256548)
chr3 (4-37)||(13866025-13866058)
chr3 (9-42)||(16931606-16931639)
chr3 (9-42)||(32633482-32633515)
chr3 (4-41)||(39241359-39241396)
chr3 (4-37)||(44894152-44894185)
chr3 (1-42)||(46152615-46152656)
chr3 (4-44)||(15986233-15986273)
chr3 (4-36)||(21569157-21569189)
chr3 (4-44)||(24428979-24429019)
chr3 (4-44)||(28985507-28985547)
chr3 (4-44)||(44893738-44893778)
[»] chr2 (27 HSPs)
chr2 (4-41)||(15744458-15744495)
chr2 (4-42)||(10991851-10991889)
chr2 (4-42)||(24138068-24138106)
chr2 (4-42)||(24371967-24372005)
chr2 (4-42)||(33470335-33470373)
chr2 (4-45)||(36713585-36713626)
chr2 (4-43)||(15744859-15744898)
chr2 (4-43)||(29472241-29472280)
chr2 (4-43)||(34735755-34735794)
chr2 (4-42)||(7495980-7496018)
chr2 (4-42)||(8174297-8174335)
chr2 (4-42)||(13192988-13193026)
chr2 (4-42)||(17032593-17032631)
chr2 (4-42)||(17050929-17050967)
chr2 (4-42)||(19816116-19816154)
chr2 (4-42)||(24372379-24372417)
chr2 (4-37)||(7469570-7469603)
chr2 (4-37)||(12860385-12860418)
chr2 (13-42)||(12860757-12860786)
chr2 (4-37)||(19815709-19815742)
chr2 (4-37)||(26181705-26181738)
chr2 (4-37)||(30898713-30898746)
chr2 (9-37)||(2147890-2147918)
chr2 (9-37)||(8173890-8173918)
chr2 (5-37)||(8444827-8444859)
chr2 (4-40)||(8445201-8445237)
chr2 (4-44)||(8963229-8963269)
[»] scaffold0182 (2 HSPs)
scaffold0182 (4-39)||(19711-19746)
scaffold0182 (4-37)||(20120-20153)
[»] scaffold0526 (2 HSPs)
scaffold0526 (9-43)||(4084-4118)
scaffold0526 (9-42)||(4030-4063)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-42)||(8429-8467)
[»] scaffold0029 (2 HSPs)
scaffold0029 (4-42)||(72762-72800)
scaffold0029 (4-42)||(73173-73211)
[»] scaffold0134 (1 HSPs)
scaffold0134 (9-42)||(14552-14585)
[»] scaffold0019 (1 HSPs)
scaffold0019 (10-45)||(50895-50930)
[»] scaffold0115 (2 HSPs)
scaffold0115 (4-42)||(21512-21550)
scaffold0115 (4-42)||(22565-22603)
[»] scaffold0246 (1 HSPs)
scaffold0246 (13-41)||(6030-6058)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 23122018 - 23122162
Alignment:
Q  43 attagtattctaccacatgtattccattatgaacatgtgcttcaaaaacatcttccatttattaaatgattnnnnnnnncaacttgatcatgttgtactc 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||    
T  23122018 attagtattctaccacatgtattccattatgaacatgtgcttcaaaaacatcttccatttattaaatgattcaaaaaaacaacttgattatgttgtactc 23122117  T
Q  143 cctgaatgcacccaaaataagaataatcaaagaggataaaataac 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  23122118 ccagaatgcacccaaaataagaataatcaaagaggataaaataac 23122162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 34470956 - 34470995
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  34470956 ccaactaaatagttagaggaccaaaaaggtaattaagcca 34470995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 15048437 - 15048399
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  15048437 ccaattaaatagttagaggaccaaaaaggtaatttagcc 15048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 22763345 - 22763383
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  22763345 ccaattaaatagttagaggaccaaaaaggtaatttagcc 22763383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 33296096 - 33296134
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33296096 ccaattaaatagttagaggaccaaaaaggtaatttagcc 33296134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 15048811 - 15048844
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  15048811 ccaactaaatagttagaggaccaaaaaggtaatt 15048844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 40660299 - 40660331
Alignment:
Q  5 caactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||||||||||||||||||||    
T  40660299 caactaaatagttagaggaccaaaaaggtaatt 40660331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 45077621 - 45077653
Alignment:
Q  10 aaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||    
T  45077621 aaatagttagaggaccaaaaaggtaatttagcc 45077653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 11174046 - 11174081
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaattta 39  Q
    |||| |||||||||||||||||||||||||||||||    
T  11174046 ccaattaaatagttagaggaccaaaaaggtaattta 11174081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 27473109 - 27473070
Alignment:
Q  5 caactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  27473109 caactaaatagttagaggaccaaaaagataattaagccat 27473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 40660021 - 40659982
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  40660021 ccaattaaatagttagaggaccaaaaaagtaatttagcca 40659982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 45077259 - 45077220
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  45077259 ccaattaaatagttagaggaccaaaaaggtaattaagcca 45077220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 45276635 - 45276596
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  45276635 ccaactaaatagttagaggaccaaaaagataattaagcca 45276596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 1646539 - 1646501
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  1646539 ccaattaaatagttagaggaccaaaaaggtaattaagcc 1646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 7535245 - 7535283
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  7535245 ccaattaaatagttagaggaccaaaaagataatttagcc 7535283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 11920184 - 11920222
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  11920184 ccaattaaatagttagatgaccaaaaaggtaatttagcc 11920222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 15872038 - 15872072
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  15872038 taaatagttagaggaccaaaaatgtaatttagcca 15872072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 24666090 - 24666128
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  24666090 ccaattaaatagttagaggaccaaaaaggtaattaagcc 24666128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 27473483 - 27473521
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  27473483 ccaattaaattgttagaggaccaaaaaggtaatttagcc 27473521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 33819823 - 33819785
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  33819823 ccaattaaataattagaggaccaaaaaggtaatttagcc 33819785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 45277008 - 45277046
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  45277008 ccaattaaatagttagaggaccaaaaagataatttagcc 45277046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 1651983 - 1652016
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  1651983 ccaattaaatagttagaggaccaaaaaggtaatt 1652016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 1740359 - 1740392
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  1740359 ccaattaaatagttagaggaccaaaaaggtaatt 1740392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 5434938 - 5434905
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  5434938 ccaattaaatagttagaggaccaaaaaggtaatt 5434905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 33295774 - 33295745
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggt 33  Q
    ||||||||||||||||||||||||||||||    
T  33295774 ccaactaaatagttagaggaccaaaaaggt 33295745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 1739981 - 1739953
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||||||||||||||||    
T  1739981 taaatagttagaggaccaaaaaggtaatt 1739953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5435320 - 5435352
Alignment:
Q  12 atagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||||||||||||||| ||||||||||||    
T  5435320 atagttagaggaccaaaaagataatttagccat 5435352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 37569352 - 37569320
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaat 36  Q
    |||| ||||||||||||||||||||||||||||    
T  37569352 ccaattaaatagttagaggaccaaaaaggtaat 37569320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 22630559 - 22630415
Alignment:
Q  43 attagtattctaccacatgtattccattatgaacatgtgcttcaaaaacatcttccatttattaaatgattnnnnnnnncaacttgatcatgttgtactc 142  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||         |||||||||||||||||||     
T  22630559 attagtattctaccacatgtattccattatgaacatgtgtttcaaaaacatcttccatttattaaatgattaaaaaaaataacttgatcatgttgtactt 22630460  T
Q  143 cctgaatgcacccaaaataagaataatcaaagaggataaaataac 187  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  22630459 cctgaatgcacccaaaataggaataattaaagaggataaaataac 22630415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 37424681 - 37424713
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||||||||||||||||||||||||||||||||    
T  37424681 taaatagttagaggaccaaaaaggtaatttagc 37424713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 1140177 - 1140216
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  1140177 ccaactaaatagttagaggaccaaaaaggcaattaagcca 1140216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 16860336 - 16860301
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagccat 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16860336 taaatagttagaggaccaaaaagataatttagccat 16860301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 24040504 - 24040539
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||||||||||||||||| |||||||||||||    
T  24040504 taaatagttagaggaccaaaaaagtaatttagccat 24040539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 38958762 - 38958723
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  38958762 ccaattaaatagttagaggaccaaaaaggtaattaagcca 38958723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 19128470 - 19128504
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||||| |||||    
T  19128470 taaatagttagaggaccaaaaaggtaattaagcca 19128504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 27186285 - 27186323
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  27186285 ccaattaaatagttagaggaccaaaaatgtaatttagcc 27186323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 36440238 - 36440200
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  36440238 ccaactaaatagttagaggatcaaaaaggtaattaagcc 36440200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 36440612 - 36440650
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  36440612 ccaattaaatagttagaggaccaaaaagataatttagcc 36440650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 38959135 - 38959173
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  38959135 ccaattaaatagttagaggaccaaaaaggtaattaagcc 38959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 19184635 - 19184602
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  19184635 ccaattaaatagttagaggaccaaaaaggtaatt 19184602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 25183065 - 25183098
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  25183065 ccaattaaatagttagaggaccaaaaaggtaatt 25183098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 32288116 - 32288083
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  32288116 ccaattaaatagttagaggaccaaaaaggtaatt 32288083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 35569813 - 35569780
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||| ||||||||||||||||    
T  35569813 ccaactaaatagttagaagaccaaaaaggtaatt 35569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 24200 - 24162
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24200 ccaactaaatagttagaggaccaaaaaggtaatttagcc 24162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 15932768 - 15932730
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15932768 ccaactaaatagttagaggaccaaaaaggtaatttagcc 15932730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 2517414 - 2517454
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  2517414 ccaactaaatagttagaggaccaaaaaggtaattaagccat 2517454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 31238158 - 31238197
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  31238158 ccaactaaatagttagaggaccaaaaaggtaattaagcca 31238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 31247528 - 31247567
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  31247528 ccaactaaatagttagaggaccaaaaaggtaattaagcca 31247567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 34518104 - 34518143
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  34518104 ccaattaaatagttagaggaccaaaaaggtaatttagcca 34518143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 35167528 - 35167489
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  35167528 ccaactaaatagttagaggaccaaaaaggtaattaagcca 35167489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 6235959 - 6235921
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  6235959 ccaattaaatagttagaggaccaaaaaggtaatttagcc 6235921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 21856967 - 21857005
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21856967 ccaactaaatacttagaggaccaaaaaggtaatttagcc 21857005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 25180260 - 25180298
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25180260 ccaactaaatagttagaggaccagaaaggtaatttagcc 25180298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 24744732 - 24744772
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  24744732 ccaactaaatagttagaggaccaaaaagataattaagccat 24744772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 35
Target Start/End: Original strand, 5311238 - 5311269
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaa 35  Q
    ||||||||||||||||||||||||||||||||    
T  5311238 ccaactaaatagttagaggaccaaaaaggtaa 5311269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 9046124 - 9046085
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  9046124 ccaattaaatagttagaggaccaaaaaagtaatttagcca 9046085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 17244702 - 17244663
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  17244702 ccaattaaatagttagaggaccaaaaaggtaattaagcca 17244663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 978453 - 978415
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  978453 ccaactaaatagttagaggaccaaaaatgtaattaagcc 978415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 5310859 - 5310825
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||| |||||||||||    
T  5310859 taaatagttagaggaccaaaaagataatttagcca 5310825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 6137417 - 6137379
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  6137417 ccaattaaatagttagaggaccaaaaaggtaattaagcc 6137379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 6137789 - 6137831
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatta 46  Q
    |||| ||||||||||||||||||||||||||||| || |||||    
T  6137789 ccaattaaatagttagaggaccaaaaaggtaattaagtcatta 6137831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 7438842 - 7438804
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  7438842 ccaattaaatagttagaggaccaaaaagataatttagcc 7438804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 9046498 - 9046536
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  9046498 ccaattaaatagttagaggaccaaaaaggtaattaagcc 9046536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 21856593 - 21856555
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  21856593 ccaactaaatagttagaggaccaaaaatgtaattaagcc 21856555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 32753210 - 32753176
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  32753210 taaatagttagaggaccaaaaatgtaatttagcca 32753176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 34517310 - 34517272
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  34517310 ccaattaaatagttagaggaccaaaaaagtaatttagcc 34517272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 34890682 - 34890644
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  34890682 ccaattaaatagttagaggaacaaaaaggtaatttagcc 34890644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 35167867 - 35167905
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  35167867 ccaattaaatagttagaggaccaaaaatgtaatttagcc 35167905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 5937851 - 5937818
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  5937851 ccaattaaatagttagaggaccaaaaaggtaatt 5937818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 15932968 - 15933001
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  15932968 ccaactaaatagttagaggaccaaaaatgtaatt 15933001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 25176701 - 25176668
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  25176701 ccaactaaatagttagaggaccaaaaatgtaatt 25176668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 29260569 - 29260532
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  29260569 ccaattaaatagttagaggaccagaaaggtaatttagc 29260532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 32753585 - 32753618
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  32753585 ccaattaaatagttagaggaccaaaaaggtaatt 32753618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 8847434 - 8847470
Alignment:
Q  132 atgttgtactccctgaatgcacccaaaataagaataa 168  Q
    |||||||||||| || |||||||||||||||||||||    
T  8847434 atgttgtactccttgcatgcacccaaaataagaataa 8847470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 34994792 - 34994832
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| |||||||||||| ||| |||||||||||||||||||    
T  34994792 ccaattaaatagttagatgactaaaaaggtaatttagccat 34994832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 4513328 - 4513366
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4513328 ccaactaaatagttagaggaccaaaaaggtaatttagcc 4513366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 16038206 - 16038244
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16038206 ccaactaaatagttagaggaccaaaaaggtaatttagcc 16038244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 8398069 - 8398029
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  8398069 ccaactaaatagttagaggaccaaaaaggtaattaagccat 8398029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 53994972 - 53994932
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  53994972 ccaactaaatagttagaggaccaaaaaggtaattaagccat 53994932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 39448900 - 39448939
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  39448900 ccaattaaatagttagaggaccaaaaaggtaatttagcca 39448939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 53751314 - 53751353
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  53751314 ccaattaaatagttagaggaccaaaaaggtaatttagcca 53751353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 624091 - 624129
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  624091 ccaactaaatagttagaggaccaaaaatgtaatttagcc 624129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8592007 - 8591969
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8592007 ccaactaaatagttagaggactaaaaaggtaatttagcc 8591969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 14985369 - 14985331
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  14985369 ccaattaaatagttagaggaccaaaaaggtaatttagcc 14985331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 19088753 - 19088791
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  19088753 ccaattaaatagttagaggaccaaaaaggtaatttagcc 19088791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 47603773 - 47603811
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  47603773 ccaattaaatagttagaggaccaaaaaggtaatttagcc 47603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 53995347 - 53995385
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  53995347 ccaattaaatagttagaggaccaaaaaggtaatttagcc 53995385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 55022322 - 55022284
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  55022322 ccaattaaatagttagaggaccaaaaaggtaatttagcc 55022284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 38339904 - 38339945
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  38339904 ccaattaaatagttagaggaccaaaaaggtaattaagccatt 38339945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 42855377 - 42855344
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  42855377 ccaactaaatagttagaggaccaaaaaggtaatt 42855344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 8592381 - 8592420
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  8592381 ccaactaaatagttagaggaccaaaaatgtaattaagcca 8592420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 15478057 - 15478096
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  15478057 ccaattaaatagttagaagaccaaaaaggtaatttagcca 15478096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 44991317 - 44991278
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  44991317 ccaattaaatagttagaggaccaaaaaggtaattaagcca 44991278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 1433683 - 1433721
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  1433683 ccaattaaatagttagaggaccaaaaatgtaatttagcc 1433721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 12817844 - 12817806
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  12817844 ccaattaaatagttagagaaccaaaaaggtaatttagcc 12817806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 15477683 - 15477645
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  15477683 ccaattaaatagttagaggaccaaaaaggtaattaagcc 15477645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 16037832 - 16037794
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  16037832 ccaactaaatagttagaggaccaaaaatgtaattaagcc 16037794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 21763593 - 21763631
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  21763593 ccaattaaatagttagaggaccaaaaatgtaatttagcc 21763631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 25182224 - 25182262
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  25182224 ccaactaaatagttagaagaccaaaaagataatttagcc 25182262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 33091486 - 33091452
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||||| |||||    
T  33091486 taaatagttagaggaccaaaaaggtaattaagcca 33091452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 38339525 - 38339491
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||||| |||||    
T  38339525 taaatagttagaggaccaaaaaggtaattcagcca 38339491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 44957774 - 44957808
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||||| |||||    
T  44957774 taaatagttagaggaccaaaaaggtaattaagcca 44957808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 44991690 - 44991728
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  44991690 ccaattaaatagttagaggaccaaaaagataatttagcc 44991728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 46849707 - 46849669
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  46849707 ccaactaaatagttagaggacgaaaaaggtaattaagcc 46849669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 47602981 - 47602943
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  47602981 ccaattaaatagttagaggaccaaaaagataatttagcc 47602943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 14985748 - 14985781
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||||| ||||    
T  14985748 taaatagttagaggaccaaaaaggtaattaagcc 14985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 19088379 - 19088346
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||||||||||||||| |||||    
T  19088379 ccaactaaatagttagaggaccaaaaagataatt 19088346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 30683564 - 30683531
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  30683564 ccaattaaatagttagaggaccaaaaaggtaatt 30683531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 43734324 - 43734291
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  43734324 ccaattaaatagttagaggaccaaaaaggtaatt 43734291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 50769233 - 50769266
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  50769233 ccaattaaatagttagaggaccaaaaaggtaatt 50769266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 52557125 - 52557092
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  52557125 ccaattaaatagttagaggaccaaaaaggtaatt 52557092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 53259550 - 53259587
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  53259550 ccaattaaatagttagaggaccaaaaagataatttagc 53259587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 25181848 - 25181812
Alignment:
Q  6 aactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  25181848 aactaaatagttagaggaccaaaaatgtaattaagcc 25181812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 52557499 - 52557535
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttag 40  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  52557499 ccaattaaatagttagaggaccaaaaagataatttag 52557535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 12481471 - 12481509
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12481471 ccaactaaatagttagaggaccaaaaaggtaatttagcc 12481509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 37576593 - 37576632
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  37576593 ccaactaaatagttagaggaccaaaaaggtaattaagcca 37576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 1763086 - 1763124
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1763086 ccaattaaatagttagaggaccaaaaaggtaatttagcc 1763124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 10831169 - 10831131
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  10831169 ccaattaaatagttagaggaccaaaaaggtaatttagcc 10831131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 12127095 - 12127057
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  12127095 ccaactaaatagttagaggaccaaaaaggtaattaagcc 12127057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 16023935 - 16023893
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatta 46  Q
    |||| |||||||||||||||||||||| |||||||||||||||    
T  16023935 ccaattaaatagttagaggaccaaaaaagtaatttagccatta 16023893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3089383 - 3089342
Alignment:
Q  1 atgccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  3089383 atgccaattaaatagttagaggacccaaaaggtaatttagcc 3089342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 27548081 - 27548122
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  27548081 ccaattaaatagttagaggacaaaaaaggtaatttagccatt 27548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 31704025 - 31704066
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  31704025 ccaactaaatagttagaggaccaaaaatgtaattaagccatt 31704066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 35612494 - 35612530
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttag 40  Q
    |||| ||||||||||||||||||||||||||||||||    
T  35612494 ccaattaaatagttagaggaccaaaaaggtaatttag 35612530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 13109239 - 13109278
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  13109239 ccaattaaatagttagaggactaaaaaggtaatttagcca 13109278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 13183804 - 13183765
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  13183804 ccaattaaatagttagaggatcaaaaaggtaatttagcca 13183765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 25995822 - 25995787
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaattta 39  Q
    |||| |||||||||||||||||||||||||||||||    
T  25995822 ccaattaaatagttagaggaccaaaaaggtaattta 25995787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 37467632 - 37467671
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  37467632 ccaattaaatagttagatgaccaaaaaggtaatttagcca 37467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 49140554 - 49140593
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  49140554 ccaattaaatagttagaggaccaaaaagataatttagcca 49140593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8760310 - 8760272
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  8760310 ccaattaaatagttagaggaccaaaaaggtaattaagcc 8760272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 23476753 - 23476791
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  23476753 ccaattaaatagttagaggaccaaaaatgtaatttagcc 23476791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 23598110 - 23598072
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  23598110 ccaattaaatagttagaggaccaaaaagataatttagcc 23598072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 26723213 - 26723251
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  26723213 ccaattaaatagttagaggatcaaaaaggtaatttagcc 26723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 32047781 - 32047743
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  32047781 ccaattaaatagttagaggaccaaaaaggtaattaagcc 32047743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 37304066 - 37304028
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  37304066 ccaattaaatggttagaggaccaaaaaggtaatttagcc 37304028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 45053101 - 45053139
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  45053101 ccaattaaatagttagaggaccaaaaaagtaatttagcc 45053139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 46593642 - 46593680
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  46593642 ccaattaaatagttagaggaccaaaaaagtaatttagcc 46593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 49140181 - 49140143
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  49140181 ccaactaaatagttagaggaccaaaaagataattaagcc 49140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 49644082 - 49644120
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  49644082 ccaattaaatagttagaggaccaaaaagataatttagcc 49644120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 49837431 - 49837401
Alignment:
Q  13 tagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||    
T  49837431 tagttagaggaccaaaaaggtaatttagcca 49837401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1762712 - 1762671
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    |||| |||||||||||||||||||||| |||||| |||||||    
T  1762712 ccaattaaatagttagaggaccaaaaaagtaattaagccatt 1762671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 12481097 - 12481064
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  12481097 ccaactaaatagttagaggaccaaaaatgtaatt 12481064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 20306040 - 20306007
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  20306040 ccaattaaatagttagaggaccaaaaaggtaatt 20306007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 23476379 - 23476338
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    |||| |||||||||||||||||||||| |||||| |||||||    
T  23476379 ccaattaaatagttagaggaccaaaaaagtaattaagccatt 23476338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 37576212 - 37576179
Alignment:
Q  11 aatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||||||| |||||||||||||||||||||||||    
T  37576212 aatagttaaaggaccaaaaaggtaatttagccat 37576179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 38000527 - 38000494
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  38000527 ccaattaaatagttagaggaccaaaaaggtaatt 38000494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 44323072 - 44323105
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  44323072 ccaattaaatagttagaggaccaaaaaggtaatt 44323105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 46592845 - 46592813
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||||||||||||| ||||||||||||||||||    
T  46592845 taaatagttagagggccaaaaaggtaatttagc 46592813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 48626475 - 48626520
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccattagta 49  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||    
T  48626475 ccaattaaatagttagaggaccaaaaaggtaatttagcctttagta 48626520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 1114092 - 1114056
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttag 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  1114092 ccaactaaatagttagaggaccaaaaaggtaatttag 1114056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 41453417 - 41453452
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaattta 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  41453417 ccaactaaatagttagaggaccaaaaaggtaattta 41453452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 6356803 - 6356765
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  6356803 ccaattaaatagttagaggaccaaaaaggtaatttagcc 6356765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8416523 - 8416485
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  8416523 ccaattaaatagttagaggaccaaaaaggtaatttagcc 8416485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 10526349 - 10526311
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  10526349 ccaattaaatagttagaggaccaaaaaggtaatttagcc 10526311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 36423812 - 36423850
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  36423812 ccaattaaatagttagaggaccaaaaaggtaatttagcc 36423850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 48626101 - 48626063
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  48626101 ccaactaaatagttagaggaccaaaaaggtaattaagcc 48626063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 19681533 - 19681500
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  19681533 ccaactaaatagttagaggaccaaaaaggtaatt 19681500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 35146735 - 35146698
Alignment:
Q  6 aactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||| |||||    
T  35146735 aactaaatagttagaggaccaaaaaggtaattaagcca 35146698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 31638355 - 31638395
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  31638355 ccaattaaatagttagagaaccaaaaaggtaatttagccat 31638395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 7578910 - 7578871
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  7578910 ccaactaaatagttagaggaccaaaaaagtaattaagcca 7578871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 8417348 - 8417387
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  8417348 ccaattaaatagttagaggaccaaaaagataatttagcca 8417387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 41892004 - 41891965
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  41892004 ccaattaaatagttagaggaccaaaaaagtaatttagcca 41891965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 1114458 - 1114496
Alignment:
Q  5 caactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  1114458 caactaaatagttagaggaccaaaaatgtaattaagcca 1114496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 4155636 - 4155598
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  4155636 ccaattaaatagttagaggaccaaaaaggtaattaagcc 4155598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8542537 - 8542499
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  8542537 ccaactaaatagttagaagacgaaaaaggtaatttagcc 8542499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 16867737 - 16867707
Alignment:
Q  12 atagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||    
T  16867737 atagttagaggaccaaaaaggtaatttagcc 16867707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 17749968 - 17749934
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||||| |||||    
T  17749968 taaatagttagaggaccaaaaaggtaattaagcca 17749934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 19681907 - 19681945
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  19681907 ccaattaaatagtcagaggaccaaaaaggtaatttagcc 19681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 21391228 - 21391190
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  21391228 ccaattaaatagttagaggaccaaaaaggtaattaagcc 21391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 29277755 - 29277793
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  29277755 ccaaataaatagttagaggaccaaaaaggtaattaagcc 29277793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 36674141 - 36674179
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  36674141 ccaattaaatagtcagaggaccaaaaaggtaatttagcc 36674179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 41453043 - 41453005
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  41453043 ccaactaaatagttagaggaccaaaaatgtaattaagcc 41453005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 44332931 - 44332969
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  44332931 ccaattaaatagttagaggaccaaaaatgtaatttagcc 44332969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 8542910 - 8542943
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  8542910 ccaactaaatagttagaggaccaaaaatgtaatt 8542943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 36674013 - 36673980
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||| ||||||||||    
T  36674013 ccaactaaatagttagaggaccataaaggtaatt 36673980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 41192097 - 41192134
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  41192097 ccaattaaatagttagaggaccaaaaaagtaatttagc 41192134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34037323 - 34037359
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttag 40  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  34037323 ccaattaaatagttagaggaccaaaaagataatttag 34037359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 45307104 - 45307145
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  45307104 ccaactaaatagttagaggaccaaaaaggtaattaagccatt 45307145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 54108314 - 54108354
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  54108314 ccaattaaatagttagaggaccaaaaaggtaatttagccat 54108354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 10506360 - 10506399
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10506360 ccaattaaatagttagaggaccaaaaaggtaatttagcca 10506399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 42591817 - 42591782
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagccat 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  42591817 taaatagttagaggaccaaaaaggtaatttagccat 42591782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 5900835 - 5900873
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  5900835 ccaactaaatagttagaggaccaaaaatgtaatttagcc 5900873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 51509157 - 51509119
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  51509157 ccaactaaatagttagaggaccaaaaaggtaattaagcc 51509119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21969667 - 21969630
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21969667 ccaattaaatagttagaggaccaaaaaggtaatttagc 21969630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21992103 - 21992066
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21992103 ccaattaaatagttagaggaccaaaaaggtaatttagc 21992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 47669297 - 47669260
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| |||||||||||||||||||||||||||||||||    
T  47669297 ccaattaaatagttagaggaccaaaaaggtaatttagc 47669260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 54752575 - 54752608
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  54752575 ccaactaaatagttagaggaccaaaaaggtaatt 54752608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 39664596 - 39664636
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  39664596 ccaattaaatagttagaggaccaaaaatgtaatttagccat 39664636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 45306870 - 45306830
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  45306870 ccaattaaatagttagaggatcaaaaaggtaatttagccat 45306830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 8474258 - 8474293
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaattta 39  Q
    |||| |||||||||||||||||||||||||||||||    
T  8474258 ccaattaaatagttagaggaccaaaaaggtaattta 8474293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 12791588 - 12791627
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  12791588 ccaattaaatagttagaggaccaaaaagataatttagcca 12791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 26318220 - 26318181
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  26318220 ccaactaaatagttagaggactaaaaaggtaattaagcca 26318181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 29818215 - 29818180
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaattta 39  Q
    |||| |||||||||||||||||||||||||||||||    
T  29818215 ccaattaaatagttagaggaccaaaaaggtaattta 29818180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 44317627 - 44317666
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  44317627 ccaattaaatagttagaggaccaaaaaggtaattaagcca 44317666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 54752201 - 54752162
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  54752201 ccaattaaatagttagaggaccaaaaagataatttagcca 54752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 1994207 - 1994169
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  1994207 ccaactaaatagttagaggaccaaaaatgtaattaagcc 1994169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 1999366 - 1999328
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  1999366 ccaactaaatagttagaggaccaaaaatgtaattaagcc 1999328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 4757532 - 4757494
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  4757532 ccaactaaatagttagaggaccaaaaatgtaattaagcc 4757494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 4757905 - 4757943
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  4757905 ccaactaaatagttagaggaccaaaaatgtaattaagcc 4757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 4773281 - 4773243
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  4773281 ccaattaaatagttagaggaccaaaaaggtaattaagcc 4773243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 18464868 - 18464906
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  18464868 ccaattaaatagttagaggaccaaaaaggtaattaagcc 18464906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 26318594 - 26318632
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  26318594 ccaattaaatagttagatgaccaaaaaggtaatttagcc 26318632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 27801901 - 27801939
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  27801901 ccaattaaatagttagaggaccaaaaaggtaattaagcc 27801939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 28986553 - 28986591
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  28986553 ccaattaaataattagaggaccaaaaaggtaatttagcc 28986591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 39664222 - 39664184
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  39664222 ccaattaaatagttagaggaccaaaaaggtaattaagcc 39664184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 41835343 - 41835373
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaattta 39  Q
    |||||||||||||||||||||||||||||||    
T  41835343 taaatagttagaggaccaaaaaggtaattta 41835373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 42592196 - 42592234
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  42592196 ccaactaaatagttagaggaccaaaaatgtaattaagcc 42592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 49528187 - 49528149
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  49528187 ccaattaaatagttagaggaccaaaaaggtaattaagcc 49528149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 1994580 - 1994613
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  1994580 ccaactaaatagttagaggaccaaaaatgtaatt 1994613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 10505986 - 10505953
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  10505986 ccaattaaatagttagaggaccaaaaaggtaatt 10505953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 11256515 - 11256548
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  11256515 ccaattaaatagttagaggaccaaaaaggtaatt 11256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 13866058 - 13866025
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  13866058 ccaattaaatagttagaggaccaaaaaggtaatt 13866025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 16931639 - 16931606
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||| |||||||||||    
T  16931639 taaatagttagaggaccaaaaatgtaatttagcc 16931606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 32633482 - 32633515
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||| ||||||||||    
T  32633482 taaatagttagaggaccaaaaagataatttagcc 32633515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39241396 - 39241359
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  39241396 ccaattaaatagttagaggaccaaaaatgtaatttagc 39241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 44894152 - 44894185
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  44894152 ccaattaaatagttagaggaccaaaaaggtaatt 44894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46152656 - 46152615
Alignment:
Q  1 atgccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||| |||||||||||||||||||| | |||||||||||    
T  46152656 atgccaattaaatagttagaggaccaaagatgtaatttagcc 46152615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 15986273 - 15986233
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||||| ||||||| ||||||||||||    
T  15986273 ccaattaaatagttagaggatcaaaaagataatttagccat 15986233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 21569157 - 21569189
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaat 36  Q
    |||| ||||||||||||||||||||||||||||    
T  21569157 ccaattaaatagttagaggaccaaaaaggtaat 21569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 24428979 - 24429019
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| |||||||||||| |||||||||||||||| ||||||    
T  24428979 ccaattaaatagttagatgaccaaaaaggtaattaagccat 24429019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 28985547 - 28985507
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||||||||||| ||||||| ||||||    
T  28985547 ccaattaaatagttagaggaccaaaagggtaattaagccat 28985507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 44893778 - 44893738
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  44893778 ccaattaaatagttagagaaccaaaaagataatttagccat 44893738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 15744495 - 15744458
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagc 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15744495 ccaactaaatagttagaggaccaaaaaggtaatttagc 15744458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 10991889 - 10991851
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  10991889 ccaattaaatagttagaggaccaaaaaggtaatttagcc 10991851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 24138106 - 24138068
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  24138106 ccaattaaatagttagaggaccaaaaaggtaatttagcc 24138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 24372005 - 24371967
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  24372005 ccaactaaatagttagaggaccaaaaaggtaattaagcc 24371967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 33470335 - 33470373
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  33470335 ccaactaaatagttagaggaccaaaaaggtaattaagcc 33470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36713626 - 36713585
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  36713626 ccaattaaatagttagaggatcaaaaaggtaatttagccatt 36713585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 15744859 - 15744898
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  15744859 ccaactaaatagttagaggaccaaaaatgtaattaagcca 15744898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 29472280 - 29472241
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  29472280 ccaattaaatagttagaggaccaaaaaggtaattgagcca 29472241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 34735755 - 34735794
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  34735755 ccaattaaatagttagaggaccaaaaatgtaatttagcca 34735794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 7496018 - 7495980
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  7496018 ccaactaaatagttagaggaccaaaaatgtaattaagcc 7495980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 8174297 - 8174335
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  8174297 ccaattaaatagttagaggaccaaaaagataatttagcc 8174335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 13193026 - 13192988
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  13193026 ccaattaaatagttagaggaccaaaaaagtaatttagcc 13192988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 17032631 - 17032593
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  17032631 ccaattaaatagttagaggaccaaaaagataatttagcc 17032593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 17050967 - 17050929
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  17050967 ccaattaaatagttagaggaccaaaaagataatttagcc 17050929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 19816116 - 19816154
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  19816116 ccaattaaatagtttgaggaccaaaaaggtaatttagcc 19816154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 24372379 - 24372417
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  24372379 ccaattaaatagttagaggaccaaaaatgtaatttagcc 24372417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 7469570 - 7469603
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||||| |||||||||||||||    
T  7469570 ccaactaaatagttagagaaccaaaaaggtaatt 7469603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 12860418 - 12860385
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  12860418 ccaactaaatagttagaggaccaaaaatgtaatt 12860385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 12860757 - 12860786
Alignment:
Q  13 tagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||||||    
T  12860757 tagttagaggaccaaaaaggtaatttagcc 12860786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 19815742 - 19815709
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  19815742 ccaactaaatagttagaggaccaaaaatgtaatt 19815709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 26181738 - 26181705
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||| |||||||||||||||||||||||||||||    
T  26181738 ccaattaaatagttagaggaccaaaaaggtaatt 26181705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 30898713 - 30898746
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  30898713 ccaactaaatagttagaggaccaaaaatgtaatt 30898746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 2147918 - 2147890
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||||||||||||||||    
T  2147918 taaatagttagaggaccaaaaaggtaatt 2147890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 8173918 - 8173890
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||||||||||||||||    
T  8173918 taaatagttagaggaccaaaaaggtaatt 8173890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 8444859 - 8444827
Alignment:
Q  5 caactaaatagttagaggaccaaaaaggtaatt 37  Q
    |||||||||||||||| ||||||||||||||||    
T  8444859 caactaaatagttagaagaccaaaaaggtaatt 8444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 8445201 - 8445237
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttag 40  Q
    |||| |||||||||||||||| |||||||||||||||    
T  8445201 ccaattaaatagttagaggacaaaaaaggtaatttag 8445237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8963229 - 8963269
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagccat 44  Q
    |||| ||||||||||||| |||||||| |||||||||||||    
T  8963229 ccaattaaatagttagagaaccaaaaaagtaatttagccat 8963269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 19746 - 19711
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaattta 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  19746 ccaactaaatagttagaggaccaaaaaggtaattta 19711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 20120 - 20153
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  20120 ccaactaaatagttagaggaccaaaaatgtaatt 20153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 4084 - 4118
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcca 43  Q
    |||||||||||||||||||||||||||||||||||    
T  4084 taaatagttagaggaccaaaaaggtaatttagcca 4118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 4063 - 4030
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||||| ||||    
T  4063 taaatagttagaggaccaaaaaggtaattaagcc 4030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8467 - 8429
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  8467 ccaattaaatagttagaggaccaaaaaggtaatttagcc 8429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 72800 - 72762
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  72800 ccaactaaatagttagaggaccaaaaaggtaattaagcc 72762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 73173 - 73211
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  73173 ccaactaaatagttagaggaccaaaaatgtaattaagcc 73211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 14552 - 14585
Alignment:
Q  9 taaatagttagaggaccaaaaaggtaatttagcc 42  Q
    ||||||||||||||||||||||||||||||||||    
T  14552 taaatagttagaggaccaaaaaggtaatttagcc 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 50895 - 50930
Alignment:
Q  10 aaatagttagaggaccaaaaaggtaatttagccatt 45  Q
    ||||||||||||||||||||| ||||||||||||||    
T  50895 aaatagttagaggaccaaaaatgtaatttagccatt 50930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 21550 - 21512
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  21550 ccaattaaatagttagaggaccaaaaaggtaattaagcc 21512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 22565 - 22603
Alignment:
Q  4 ccaactaaatagttagaggaccaaaaaggtaatttagcc 42  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  22565 ccaattaaatagttagaggaccaaaaaggtaattaagcc 22603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 6058 - 6030
Alignment:
Q  13 tagttagaggaccaaaaaggtaatttagc 41  Q
    |||||||||||||||||||||||||||||    
T  6058 tagttagaggaccaaaaaggtaatttagc 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University