View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13082_high_7 (Length: 345)
Name: NF13082_high_7
Description: NF13082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13082_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 12 - 330
Target Start/End: Complemental strand, 45889416 - 45889093
Alignment:
| Q |
12 |
attaatatgacattaaatctaaatttaatctttgatctgaatattttcgatgatacaccaatttgtgtatgtttgcttggatggagggtcttgcgtttgt |
111 |
Q |
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| T |
45889416 |
attaatatgacattaaatctgaatttaatctttgatctgaatattttcgatgatacaccaatttgtgtatgtttgcttggatggagggtcttgcgtttgt |
45889317 |
T |
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| Q |
112 |
caaactcatggtgttactgcgagattataaaaattatggtggctttgatttagtagaagttataaaatgtaacttttgtttttgttaaaattacggattt |
211 |
Q |
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| T |
45889316 |
caaactcatggtgttactgcgagattatataaattatggtggctttgatttagtagatgttataaaatgtaacttttgtttttgttaaaattacggattt |
45889217 |
T |
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| Q |
212 |
attatgattttgagtttacactataagactctaaagtcttgttaaataattgtc-----tagattataatccgtgatccatcgtgatttcatttaataaa |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |
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| T |
45889216 |
attatgattttgagtttacactataagactctaaagtcttgttaaataattgtcaagattagataataatccgtgatccatcgtgatttcatttaataaa |
45889117 |
T |
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| Q |
307 |
ctaagttcacctcaaagagggatt |
330 |
Q |
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|||||||||||| ||||||||||| |
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| T |
45889116 |
ctaagttcaccttaaagagggatt |
45889093 |
T |
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