View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13085_low_34 (Length: 219)
Name: NF13085_low_34
Description: NF13085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13085_low_34 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 55099570 - 55099384
Alignment:
| Q |
20 |
atggtatagtatatttatggaaaaatttaattaagtcttcattcgtattttaaaatgacaattagcacgaggcaaataaatatatgaaatgtgacactta |
119 |
Q |
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| T |
55099570 |
atggtatagtatatttatggaaaaatttaattaagtcttcattcgtattttaaaatgacaattagcacgaggcaaataaatatatgaaatgtgacactta |
55099471 |
T |
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| Q |
120 |
acatgagacgggagaaatatgatgcaggtaacaatttgcataggtaattaaaaataaatattgtacttggtttttgaccagccatgt |
206 |
Q |
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| T |
55099470 |
acatgagacgggagaaatatgatgcaggtaacaatttgcataggtaattaaaaataaatattgtacttggtttttgaccagccatgt |
55099384 |
T |
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