View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13086_low_2 (Length: 317)
Name: NF13086_low_2
Description: NF13086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13086_low_2 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 87 - 317
Target Start/End: Complemental strand, 30909936 - 30909704
Alignment:
| Q |
87 |
agctccaactccacatgttatacctgaatatagttgttgccatcaaattaagagtgaata--caaaagaatgaatatgagagctcctaaagttctatatt |
184 |
Q |
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| T |
30909936 |
agctccaactccacatgttatacctgaatatagttgttgccatcaaattaagagtgaatgtgcaaaagaatgaatatgagagctcctatagttctatatt |
30909837 |
T |
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| Q |
185 |
tcttgtttaaattttatttcaagatcttattctttcactatattttcttttacaatgtttgaaaatggaaattaaaaatgttttagaaagtgaacaagtc |
284 |
Q |
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| T |
30909836 |
tcttgtttaaattttatttcaagatcttattctttcactatattttcttttacaatgtttgaaaatggaaattaaaaatgttttagaaagtgaacaagtc |
30909737 |
T |
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| Q |
285 |
caagtttcagatgaataacattaagataaatat |
317 |
Q |
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| T |
30909736 |
caagtttcagatgaataccattaagataaatat |
30909704 |
T |
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