View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13088_high_7 (Length: 264)
Name: NF13088_high_7
Description: NF13088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13088_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 5836475 - 5836225
Alignment:
| Q |
1 |
ttgtaattcttgtggtggtgatgaaaacactttcaataccaataatactcatcatcatgatgagtatagtnnnnnnnnnnnnnnnnnngatcattatggt |
100 |
Q |
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| T |
5836475 |
ttgtaattcttgtggtggtgatgaaaacactttcactaccaataatactcatcatcatgatgagtatagtcaacaacaacaacaacaagatcattatggt |
5836376 |
T |
|
| Q |
101 |
gttcctcaaaaaagctatgttggtgatagtgttgttcctgttcaacaacag---gtacagaattttcaacttgggttggaatttgagtcttccaaagctg |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5836375 |
gttcctcaaaaaagctatgttggtgatagtgttgttcctgttcaacaacagcaggtacagaattttcaacttgggttggaatttgagtcttccaaagctg |
5836276 |
T |
|
| Q |
198 |
gattcagttacaatggtggttctattagtcaaagtgtaagatttttcaatt |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5836275 |
gattcagttacaatggtggttctattagtcaaagtgtaagatttttcaatt |
5836225 |
T |
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