View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13088_low_16 (Length: 220)
Name: NF13088_low_16
Description: NF13088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13088_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 14150042 - 14150231
Alignment:
| Q |
15 |
caaaggttaaagatgacactgcaaaatcagaggccaaaaccctttccaatgccattaagaatgctcaaaagaagccaattgttgaggatgatgaagtaat |
114 |
Q |
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| T |
14150042 |
caaaggttaaagatgacactgcaaaatcagaggctaaaacactttccaatgccattaagaatgctcaaaacaagccaattgttgaggatgatgaagtaat |
14150141 |
T |
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| Q |
115 |
aaggatattggcaacaagaagcaagctacatcttcaagcagtttacaagcactataaagagatttctggcaagaatcttgaagaggtatt |
204 |
Q |
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| T |
14150142 |
aaggatattggcaacaagaagcaagctacatcttcaagcagtttacaagcactataaagagatttctgggaagaatcttgaagaggtatt |
14150231 |
T |
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