View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1308_high_86 (Length: 203)
Name: NF1308_high_86
Description: NF1308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1308_high_86 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10923022 - 10923190
Alignment:
| Q |
1 |
gggtcaccaaaacagtcaccaccagatgatgctactgtttctccagcaaaacctgtcaattcatctaaaccttcaaagaaatcatctgttacaaccatat |
100 |
Q |
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| T |
10923022 |
gggtcaccaaaacagtcaccaccagatgatgctactgtttttccagcaaaacctgtcaattcatctaaaccttcaaagaaatcatctgttacaaccatat |
10923121 |
T |
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| Q |
101 |
cagataactcaaattcattttcctcctcatcatcattcatcatttcttccaaatcttctttgctctctg |
169 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10923122 |
cagataactcaaattcattttcctcctcatcatcattcatcatttcttccaaatcttctttgctctctg |
10923190 |
T |
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