View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1308_low_11 (Length: 540)

Name: NF1308_low_11
Description: NF1308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1308_low_11
NF1308_low_11
[»] chr8 (46 HSPs)
chr8 (97-453)||(38505635-38505989)
chr8 (452-519)||(32064743-32064810)
chr8 (454-519)||(34665382-34665447)
chr8 (450-518)||(15187556-15187624)
chr8 (443-519)||(17841850-17841926)
chr8 (451-519)||(42755042-42755110)
chr8 (444-519)||(26042116-26042191)
chr8 (452-519)||(40780129-40780196)
chr8 (454-519)||(20091801-20091866)
chr8 (454-519)||(24211553-24211618)
chr8 (454-519)||(32393858-32393923)
chr8 (452-519)||(1645965-1646032)
chr8 (449-519)||(37986055-37986125)
chr8 (454-519)||(35353041-35353106)
chr8 (462-519)||(38016979-38017036)
chr8 (455-519)||(14128865-14128929)
chr8 (452-519)||(31347782-31347849)
chr8 (452-519)||(39772801-39772868)
chr8 (449-519)||(7017865-7017935)
chr8 (452-519)||(6108233-6108300)
chr8 (457-519)||(8453837-8453899)
chr8 (454-519)||(37132658-37132723)
chr8 (455-519)||(27782117-27782181)
chr8 (453-519)||(41819778-41819844)
chr8 (454-519)||(30835047-30835111)
chr8 (459-519)||(25581239-25581299)
chr8 (464-519)||(7021988-7022043)
chr8 (458-519)||(3890413-3890474)
chr8 (454-519)||(27835453-27835518)
chr8 (458-519)||(1503642-1503702)
chr8 (458-519)||(17841649-17841709)
chr8 (447-508)||(24844869-24844930)
chr8 (458-519)||(26041912-26041972)
chr8 (458-519)||(40779928-40779988)
chr8 (466-517)||(1886621-1886672)
chr8 (465-519)||(35353247-35353300)
chr8 (482-519)||(3890616-3890653)
chr8 (458-519)||(6108032-6108092)
chr8 (458-519)||(10044554-10044614)
chr8 (458-519)||(14129065-14129125)
chr8 (458-519)||(20091600-20091660)
chr8 (458-519)||(31347575-31347635)
chr8 (458-519)||(34665587-34665647)
chr8 (458-519)||(37985855-37985915)
chr8 (482-518)||(3597042-3597078)
chr8 (454-498)||(30055543-30055587)
[»] chr7 (22 HSPs)
chr7 (444-519)||(45637702-45637777)
chr7 (453-519)||(15577850-15577916)
chr7 (454-519)||(4974735-4974800)
chr7 (454-519)||(42611811-42611876)
chr7 (452-519)||(15329271-15329338)
chr7 (454-519)||(48880927-48880992)
chr7 (454-517)||(24394972-24395035)
chr7 (453-519)||(35444557-35444623)
chr7 (454-519)||(3961979-3962044)
chr7 (454-519)||(34482835-34482900)
chr7 (450-519)||(37477080-37477149)
chr7 (454-519)||(25167850-25167915)
chr7 (453-519)||(18036977-18037043)
chr7 (454-519)||(15238382-15238447)
chr7 (454-507)||(20010109-20010162)
chr7 (457-518)||(36790467-36790528)
chr7 (458-519)||(29737143-29737204)
chr7 (445-519)||(42696074-42696148)
chr7 (458-519)||(25167655-25167715)
chr7 (458-519)||(48880726-48880786)
chr7 (482-519)||(30848597-30848634)
chr7 (458-519)||(30848775-30848835)
[»] chr4 (38 HSPs)
chr4 (452-519)||(10442789-10442856)
chr4 (453-519)||(31078819-31078885)
chr4 (454-519)||(22199261-22199326)
chr4 (454-519)||(49387888-49387953)
chr4 (447-519)||(24128232-24128304)
chr4 (452-519)||(21802322-21802389)
chr4 (454-517)||(36072947-36073010)
chr4 (452-519)||(47290064-47290131)
chr4 (453-519)||(33530688-33530754)
chr4 (449-519)||(36073345-36073415)
chr4 (454-519)||(2624837-2624902)
chr4 (453-517)||(4751445-4751509)
chr4 (455-519)||(7745112-7745176)
chr4 (452-519)||(24392665-24392732)
chr4 (452-519)||(44893424-44893491)
chr4 (445-519)||(50156578-50156652)
chr4 (447-519)||(46441837-46441909)
chr4 (452-519)||(23964465-23964532)
chr4 (453-519)||(53123029-53123096)
chr4 (453-516)||(37934944-37935007)
chr4 (453-519)||(44893213-44893280)
chr4 (460-519)||(42671675-42671734)
chr4 (458-519)||(25063373-25063434)
chr4 (482-519)||(9088898-9088935)
chr4 (458-519)||(9089076-9089136)
chr4 (458-519)||(36073555-36073615)
chr4 (466-519)||(37219837-37219890)
chr4 (458-519)||(46442050-46442110)
chr4 (458-519)||(53123237-53123297)
chr4 (488-519)||(17655464-17655495)
chr4 (458-519)||(10442586-10442646)
chr4 (458-519)||(11314050-11314111)
chr4 (458-519)||(31078618-31078678)
chr4 (466-519)||(42671874-42671927)
chr4 (458-519)||(44893012-44893072)
chr4 (458-519)||(44893632-44893692)
chr4 (458-519)||(47290272-47290332)
chr4 (452-480)||(30563222-30563250)
[»] chr6 (21 HSPs)
chr6 (449-519)||(6127270-6127340)
chr6 (453-519)||(33695327-33695393)
chr6 (453-519)||(33696695-33696761)
chr6 (452-519)||(18365573-18365640)
chr6 (452-519)||(18370837-18370904)
chr6 (452-519)||(23291084-23291151)
chr6 (452-519)||(28675146-28675213)
chr6 (454-519)||(17176021-17176086)
chr6 (454-519)||(17705465-17705530)
chr6 (453-518)||(18889698-18889762)
chr6 (454-519)||(25986930-25986995)
chr6 (465-519)||(32702216-32702270)
chr6 (454-519)||(6031741-6031806)
chr6 (460-519)||(11548588-11548647)
chr6 (457-519)||(8515725-8515787)
chr6 (451-519)||(2309423-2309491)
chr6 (458-518)||(29693652-29693712)
chr6 (452-519)||(9752245-9752311)
chr6 (488-517)||(18889593-18889622)
chr6 (458-519)||(34238886-34238946)
chr6 (458-518)||(32702412-32702471)
[»] chr1 (35 HSPs)
chr1 (445-519)||(16045798-16045872)
chr1 (454-519)||(40214988-40215053)
chr1 (444-519)||(19015394-19015469)
chr1 (454-519)||(9910293-9910358)
chr1 (454-519)||(44094698-44094763)
chr1 (451-519)||(25973411-25973478)
chr1 (452-519)||(18404440-18404507)
chr1 (452-519)||(25463674-25463741)
chr1 (454-519)||(36966708-36966773)
chr1 (454-519)||(37821834-37821899)
chr1 (452-519)||(3559615-3559682)
chr1 (453-519)||(41876442-41876508)
chr1 (454-519)||(6883487-6883552)
chr1 (454-517)||(32000269-32000332)
chr1 (452-519)||(40273700-40273767)
chr1 (452-519)||(27523255-27523324)
chr1 (453-519)||(34519757-34519823)
chr1 (458-519)||(19015610-19015670)
chr1 (466-519)||(44690828-44690881)
chr1 (458-519)||(51737711-51737771)
chr1 (454-518)||(44691030-44691094)
chr1 (453-484)||(51620979-51621010)
chr1 (458-516)||(6883696-6883753)
chr1 (458-516)||(52064376-52064434)
chr1 (466-519)||(9910098-9910150)
chr1 (458-519)||(20304929-20304989)
chr1 (458-519)||(25973613-25973673)
chr1 (458-519)||(32000065-32000125)
chr1 (458-519)||(33786430-33786490)
chr1 (458-519)||(33786635-33786695)
chr1 (458-519)||(37821633-37821693)
chr1 (458-519)||(40215194-40215254)
chr1 (458-519)||(40273914-40273974)
chr1 (458-519)||(41876241-41876301)
chr1 (453-481)||(9389275-9389303)
[»] chr5 (29 HSPs)
chr5 (446-519)||(2477628-2477701)
chr5 (451-519)||(6043511-6043579)
chr5 (444-519)||(11361131-11361206)
chr5 (453-517)||(3362777-3362841)
chr5 (451-519)||(14138665-14138733)
chr5 (453-517)||(38899728-38899792)
chr5 (452-519)||(4892200-4892267)
chr5 (452-519)||(8145373-8145440)
chr5 (449-519)||(33584329-33584399)
chr5 (454-519)||(22913054-22913119)
chr5 (454-519)||(25398238-25398303)
chr5 (448-519)||(4434007-4434078)
chr5 (454-517)||(12850801-12850864)
chr5 (454-519)||(37321793-37321859)
chr5 (454-519)||(3522006-3522071)
chr5 (454-519)||(17545685-17545750)
chr5 (454-519)||(12614733-12614798)
chr5 (466-519)||(10458409-10458462)
chr5 (458-509)||(27481830-27481881)
chr5 (458-519)||(4892408-4892468)
chr5 (458-519)||(33584128-33584188)
chr5 (458-517)||(12851010-12851068)
chr5 (449-480)||(31640964-31640995)
chr5 (458-517)||(38899524-38899583)
chr5 (458-519)||(3521806-3521866)
chr5 (458-519)||(6043311-6043371)
chr5 (458-519)||(8145579-8145639)
chr5 (458-519)||(22912856-22912916)
chr5 (458-519)||(25398444-25398504)
[»] scaffold0471 (1 HSPs)
scaffold0471 (447-519)||(12835-12907)
[»] chr3 (41 HSPs)
chr3 (451-519)||(3574527-3574595)
chr3 (452-519)||(2754715-2754782)
chr3 (452-518)||(11347266-11347332)
chr3 (454-519)||(6041884-6041949)
chr3 (450-519)||(33113789-33113858)
chr3 (454-519)||(37217053-37217118)
chr3 (452-519)||(3137414-3137481)
chr3 (454-519)||(3456064-3456129)
chr3 (454-519)||(30385011-30385076)
chr3 (454-519)||(48160905-48160970)
chr3 (452-519)||(34482910-34482977)
chr3 (454-519)||(19650900-19650965)
chr3 (455-519)||(9797029-9797093)
chr3 (452-519)||(37522051-37522118)
chr3 (453-508)||(42297352-42297407)
chr3 (453-519)||(22426344-22426410)
chr3 (454-519)||(8320584-8320649)
chr3 (454-519)||(33145713-33145777)
chr3 (453-519)||(36865027-36865093)
chr3 (450-519)||(24343543-24343612)
chr3 (454-519)||(8362045-8362110)
chr3 (454-515)||(41224233-41224294)
chr3 (453-517)||(26612784-26612848)
chr3 (466-518)||(47738117-47738169)
chr3 (452-519)||(33839529-33839596)
chr3 (465-508)||(42921154-42921197)
chr3 (451-485)||(47402630-47402664)
chr3 (458-519)||(3137213-3137273)
chr3 (458-519)||(34482687-34482747)
chr3 (458-519)||(40328037-40328098)
chr3 (466-519)||(47738317-47738370)
chr3 (463-519)||(33839741-33839797)
chr3 (457-491)||(40327878-40327912)
chr3 (458-519)||(22426144-22426204)
chr3 (458-519)||(30385606-30385666)
chr3 (458-519)||(33114000-33114060)
chr3 (458-519)||(36864831-36864892)
chr3 (458-519)||(37522259-37522319)
chr3 (458-519)||(41224440-41224500)
chr3 (482-519)||(41883223-41883260)
chr3 (466-519)||(46919100-46919153)
[»] chr2 (21 HSPs)
chr2 (451-519)||(23268062-23268130)
chr2 (452-519)||(9293576-9293643)
chr2 (453-519)||(35160756-35160822)
chr2 (454-519)||(21936081-21936146)
chr2 (455-519)||(10661888-10661952)
chr2 (452-518)||(13354844-13354910)
chr2 (451-519)||(43330909-43330977)
chr2 (452-519)||(31174834-31174901)
chr2 (453-519)||(7475508-7475574)
chr2 (453-519)||(14941366-14941432)
chr2 (454-519)||(33380207-33380272)
chr2 (456-519)||(21393688-21393751)
chr2 (452-519)||(27847630-27847697)
chr2 (454-519)||(9723405-9723470)
chr2 (466-519)||(22591494-22591547)
chr2 (458-519)||(22592918-22592979)
chr2 (458-519)||(33380413-33380473)
chr2 (458-519)||(35160965-35161025)
chr2 (482-519)||(3989104-3989141)
chr2 (458-519)||(10662094-10662154)
chr2 (458-519)||(23267861-23267921)
[»] scaffold0096 (1 HSPs)
scaffold0096 (452-519)||(41009-41076)
[»] scaffold0178 (1 HSPs)
scaffold0178 (454-519)||(11621-11686)
[»] scaffold0085 (1 HSPs)
scaffold0085 (454-519)||(47850-47915)
[»] scaffold0204 (1 HSPs)
scaffold0204 (452-519)||(4394-4461)
[»] scaffold0665 (1 HSPs)
scaffold0665 (446-519)||(3060-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (465-519)||(8413-8467)
scaffold0228 (465-519)||(15995-16049)
scaffold0228 (465-519)||(25947-26001)
scaffold0228 (458-519)||(16190-16250)
scaffold0228 (458-519)||(26142-26202)


Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 97 - 453
Target Start/End: Original strand, 38505635 - 38505989
Alignment:
Q  97 attctgccgcaatagaatgaccgaaaaacacgaatctctaatggattggaaagaaataaaatagaaatgctaaagagaagacataatttcctctctaaat 196  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38505635 attctgccgcaatagaatgaccgaaaaacacgaatctctgatggattggaaagaaacaaaatagaaatgctaaagagaagacataatttcctctctaaat 38505734  T
Q  197 acatatcaaaagggaattgaagatatcatagttcatctataagaataattcttgtatagatactcatatttagatacactnnnnnnnnnnnnnnnnnnnn 296  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||                        
T  38505735 acatatcaaaagggatttgaagatatcatagtttatctataagaataattcttgtatagacacacatatttggatacactaaaaagaaagaaaaaaaa-- 38505832  T
Q  297 ttaaataatatatatttaaaatagttgaataatgtgtattttttagtgcgtgtaaaaaatttatgtgtctaagcaagaattactttgtccaaacaattag 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38505833 ttaaataatatatatttaaaatagttgaataatgtgtattttttagtgcgtgtaaaaaatttatgtgtctaagcaagaattactttgtccaaacaattag 38505932  T
Q  397 aaaatattccaaccaaaacaacaagcatgtactaaatgagtgtgtgtataaaattaa 453  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38505933 aaaatattccaaccaaaacaacaagcatgtactaaatgagtgtgtgtataaaattaa 38505989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 32064743 - 32064810
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32064743 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 34665382 - 34665447
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 450 - 518
Target Start/End: Original strand, 15187556 - 15187624
Alignment:
Q  450 ttaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  15187556 ttaagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 17841926 - 17841850
Alignment:
Q  443 tataaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  17841926 tataaaaaaaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 42755110 - 42755042
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42755110 taagagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 26042191 - 26042116
Alignment:
Q  444 ataaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26042191 ataaaaataagagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 40780196 - 40780129
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  40780196 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 20091866 - 20091801
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 24211618 - 24211553
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 32393858 - 32393923
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 1646032 - 1645965
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  1646032 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 37986125 - 37986055
Alignment:
Q  449 attaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  37986125 attaagagtaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 35353041 - 35353106
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 462 - 519
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  462 ctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 14128865 - 14128929
Alignment:
Q  455 agcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 31347849 - 31347782
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||||    
T  31347849 aagagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 39772868 - 39772801
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  39772868 aagagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 7017935 - 7017865
Alignment:
Q  449 attaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| |||||||||| | | ||||| ||||||||||||||||||||||||||    
T  7017935 attaagagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 6108300 - 6108233
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||||||||||||||| | | |||||||| |||||||||||||||||||||||    
T  6108300 aagagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 8453837 - 8453899
Alignment:
Q  457 caatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||| || |||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 37132723 - 37132658
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||| ||| ||||||||| ||||| || |||||||||||||||||||||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 27782181 - 27782117
Alignment:
Q  455 agcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 41819844 - 41819778
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||| |||||||||||||||||||||||| |||  ||| |||||||| ||||||||||||||    
T  41819844 agagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 30835111 - 30835047
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||| |||||||||||||||||||||||   |||| ||||||||||||||||||||||||||    
T  30835111 gagcaatgttatatatcaagaaagattttatc-gaaaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  459 atgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||| |||||  | |||||||||||||||||||||||| |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  464 atatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||||| ||||  ||||||||||| ||||||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 27835518 - 27835453
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||| |||||| |||| | ||||| |||||||||||||||| | |||||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  1503642 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  17841649 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 24844930 - 24844869
Alignment:
Q  447 aaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatg 508  Q
    |||| ||||| ||||||| ||||||||||| ||||||| | ||||| |||||||||||||||    
T  24844930 aaataaagagaaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatg 24844869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  26041912 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  40779928 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 517
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    |||||||||| |||||||||| ||||  |||||||||||| |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 519
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  465 tatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  35353300 tatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  482 tatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 6108032 - 6108092
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| || |||||||    
T  6108032 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatgacacaataatc 6108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 10044614 - 10044554
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  10044614 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 14129125 - 14129065
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  14129125 aatgctagatatcaagaatgattttataa-gaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 20091600 - 20091660
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  20091600 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 31347575 - 31347635
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  31347575 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 31347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 34665647 - 34665587
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  34665647 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 37985855 - 37985915
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  37985855 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 518
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  482 tatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 498
Target Start/End: Original strand, 30055543 - 30055587
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaa 498  Q
    ||||||||||||||| |||| ||||||||||||  ||||||||||    
T  30055543 gagcaatgctatataccaaggaagattttatcaaaaaaatttcaa 30055587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 45637702 - 45637777
Alignment:
Q  444 ataaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45637702 ataaaaataagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 15577916 - 15577850
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15577916 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 4974800 - 4974735
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 42611811 - 42611876
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 15329271 - 15329338
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  15329271 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 48880992 - 48880927
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 24394972 - 24395035
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 453 - 519
Target Start/End: Original strand, 35444557 - 35444623
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  35444557 agagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 3961979 - 3962044
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 34482835 - 34482900
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 37477149 - 37477080
Alignment:
Q  450 ttaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||||||||    
T  37477149 ttaagagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 25167915 - 25167850
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||||||    
T  25167915 gagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 453 - 519
Target Start/End: Original strand, 18036977 - 18037043
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||| |||||||||||||||||||| ||| ||||| || |||||||||||||||||||||||    
T  18036977 agagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 15238382 - 15238447
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| | ||| ||| ||||| ||||||||||||||||||||||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 507
Target Start/End: Complemental strand, 20010162 - 20010109
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacat 507  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat 20010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 457 - 518
Target Start/End: Complemental strand, 36790528 - 36790467
Alignment:
Q  457 caatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 29737143 - 29737204
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||| | | |||||||| ||||||||||||| |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 445 - 519
Target Start/End: Original strand, 42696074 - 42696148
Alignment:
Q  445 taaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||||||||||| |||||||||||||||||||||| |  ||  ||| ||||||||||| |||||||||||    
T  42696074 taaaaataagagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  25167655 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  48880726 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  482 tatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 30848835 - 30848775
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| | |||||| | ||||| |||||||||||||||||| |||||||    
T  30848835 aatgctagatatcaagaatgcttttataa-gaaaaattcaagaatgacatggcacaataatc 30848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 10442856 - 10442789
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10442856 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 31078885 - 31078819
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31078885 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 22199261 - 22199326
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 49387953 - 49387888
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 24128232 - 24128304
Alignment:
Q  447 aaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24128232 aaataaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 21802389 - 21802322
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  21802389 aagagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 36072947 - 36073010
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 47290064 - 47290131
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  47290064 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 33530754 - 33530688
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  33530754 agagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 36073345 - 36073415
Alignment:
Q  449 attaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  36073345 attaagaggaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 2624837 - 2624902
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 4751445 - 4751509
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  4751445 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 7745176 - 7745112
Alignment:
Q  455 agcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 24392665 - 24392732
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  24392665 aagagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 44893424 - 44893491
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  44893424 aagagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 445 - 519
Target Start/End: Complemental strand, 50156652 - 50156578
Alignment:
Q  445 taaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||| |||||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  50156652 taaaatcaagagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 46441837 - 46441909
Alignment:
Q  447 aaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||||||    
T  46441837 aaattatgagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 23964532 - 23964465
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  23964532 aagagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 453 - 519
Target Start/End: Original strand, 53123029 - 53123096
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcat-gaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  53123029 agagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 453 - 516
Target Start/End: Complemental strand, 37935007 - 37934944
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaata 516  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||| ||||||    
T  37935007 agagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 44893280 - 44893213
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaa-tttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||| |||||||||||| |||  |||| |||||||||||||||||||||||||||    
T  44893280 agagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  460 tgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||| |||||||||||||  |||| || |||||||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||||| ||||  |||||||||||||||| |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  482 tatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  9089136 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  36073615 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||||| ||||  || |||||||||||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  46442110 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  53123297 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 519
Target Start/End: Original strand, 17655464 - 17655495
Alignment:
Q  488 gaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||    
T  17655464 gaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 10442586 - 10442646
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  10442586 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 11314050 - 11314111
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||||| ||||  | ||||||||||||| || |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 31078618 - 31078678
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  |||||| |||||||||||||||| |||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaatt-caagaatgacatggcacaataatc 31078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||||| ||||  ||||||||||||||| || |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  44893012 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  44893692 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 47290332 - 47290272
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||| | |||||||    
T  47290332 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggtacaataatc 47290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 480
Target Start/End: Original strand, 30563222 - 30563250
Alignment:
Q  452 aagagcaatgctatatatcaagaaagatt 480  Q
    |||||||||||||||||||||||||||||    
T  30563222 aagagcaatgctatatatcaagaaagatt 30563250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 6127270 - 6127340
Alignment:
Q  449 attaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  6127270 attaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 33695393 - 33695327
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 453 - 519
Target Start/End: Original strand, 33696695 - 33696761
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 18365640 - 18365573
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18365640 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 18370904 - 18370837
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18370904 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 23291151 - 23291084
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  23291151 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 28675146 - 28675213
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  28675146 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 17176086 - 17176021
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 17705530 - 17705465
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 453 - 518
Target Start/End: Complemental strand, 18889762 - 18889698
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  18889762 agagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 25986930 - 25986995
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  25986930 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  465 tatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 6031806 - 6031741
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||    
T  6031806 gagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 11548647 - 11548588
Alignment:
Q  460 tgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 8515787 - 8515725
Alignment:
Q  457 caatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||| || |  || |||||||||||||||||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 2309491 - 2309423
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||| ||||||||||||||||||||||||  |   ||| ||||||| |||||||||||||||    
T  2309491 taagagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 518
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||| |||||||||| |||||||||| ||||  || ||||||||||||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 9752311 - 9752245
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||||||||| | || |||| ||||| ||||||||||| ||||||||||||||    
T  9752311 aagagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 517
Target Start/End: Complemental strand, 18889622 - 18889593
Alignment:
Q  488 gaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||||||||||||||||||||||||||    
T  18889622 gaaaatttcaagaatgacatggcagaataa 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 34238886 - 34238946
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||||| ||| ||| ||||||||||||| || |||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaagatt-caagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 518
Target Start/End: Complemental strand, 32702471 - 32702412
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| || ||||||    
T  32702471 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatgacacaataat 32702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 519
Target Start/End: Complemental strand, 16045872 - 16045798
Alignment:
Q  445 taaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16045872 taaaataaagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 40214988 - 40215053
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 19015394 - 19015469
Alignment:
Q  444 ataaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  19015394 ataatattaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 9910358 - 9910293
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 44094698 - 44094763
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 451 - 519
Target Start/End: Original strand, 25973411 - 25973478
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25973411 taagagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 18404440 - 18404507
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  18404440 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 25463674 - 25463741
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  25463674 aagagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 36966773 - 36966708
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 37821899 - 37821834
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 3559615 - 3559682
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  3559615 aagaacaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 41876508 - 41876442
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||    
T  41876508 agagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 6883487 - 6883552
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 454 - 517
Target Start/End: Complemental strand, 32000332 - 32000269
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 40273700 - 40273767
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||||| || |||||||    
T  40273700 aagagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 27523324 - 27523255
Alignment:
Q  452 aagagcaatgctatata--tcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||  |||||||  ||||||||| ||||| || |||||||||||| ||||||||||    
T  27523324 aagagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 519
Target Start/End: Original strand, 34519757 - 34519823
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||| | ||||  ||||| |||| ||| | |||||||||    
T  34519757 agagcaatgctatatatcaagaaagattttattaagaaagattcaaaaatgccatagaagaataatc 34519823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  19015670 aatgctacatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 44690828 - 44690881
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| || |||||||||| ||||  ||||||||||||||||||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  51737771 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 518
Target Start/End: Complemental strand, 44691094 - 44691030
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    |||||||| | |||||||||||||||||||| |  |||  ||||||||| |||||||||||||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 484
Target Start/End: Original strand, 51620979 - 51621010
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttat 484  Q
    ||||||||||||||||||||||||||||||||    
T  51620979 agagcaatgctatatatcaagaaagattttat 51621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 516
Target Start/End: Complemental strand, 6883753 - 6883696
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaata 516  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| ||||    
T  6883753 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcataata 6883696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 516
Target Start/End: Original strand, 52064376 - 52064434
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaata 516  Q
    ||||||| ||||||| || |||||||||| ||||  ||||||||||||||| |||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  9910098 atatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 20304929 - 20304989
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  20304929 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 25973673 - 25973613
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| || |||||||    
T  25973673 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatgacacaataatc 25973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 32000065 - 32000125
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  32000065 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 32000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 33786430 - 33786490
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  33786430 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 33786695 - 33786635
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  33786695 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 37821633 - 37821693
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| || |||||||    
T  37821633 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatgacacaataatc 37821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 40215254 - 40215194
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  40215254 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 40273974 - 40273914
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  40273974 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 40273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 41876241 - 41876301
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||| ||| |||||||    
T  41876241 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatagcacaataatc 41876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 481
Target Start/End: Complemental strand, 9389303 - 9389275
Alignment:
Q  453 agagcaatgctatatatcaagaaagattt 481  Q
    |||||||||||||||||||||||||||||    
T  9389303 agagcaatgctatatatcaagaaagattt 9389275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 2477628 - 2477701
Alignment:
Q  446 aaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  2477628 aaaataaagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 6043579 - 6043511
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  6043579 taagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 11361206 - 11361131
Alignment:
Q  444 ataaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  11361206 ataaatttatgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 3362777 - 3362841
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3362777 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 451 - 519
Target Start/End: Original strand, 14138665 - 14138733
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  14138665 taagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 453 - 517
Target Start/End: Complemental strand, 38899792 - 38899728
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  38899792 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 4892200 - 4892267
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  4892200 aagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 8145373 - 8145440
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8145373 aagaggaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 33584399 - 33584329
Alignment:
Q  449 attaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  33584399 attatgagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 22913119 - 22913054
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 25398238 - 25398303
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  25398238 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 448 - 519
Target Start/End: Complemental strand, 4434078 - 4434007
Alignment:
Q  448 aattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||||    
T  4434078 aattatgagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 12850801 - 12850864
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 37321859 - 37321793
Alignment:
Q  454 gagcaatgctatatatc-aagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  37321859 gagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 3522071 - 3522006
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 17545750 - 17545685
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| | ||| ||| ||||| ||||||||||||||||||||||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 12614798 - 12614733
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| ||||||||| ||||  ||||||||||||||| || |||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 27481830 - 27481881
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatgg 509  Q
    |||||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  4892468 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  33584128 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 517
Target Start/End: Complemental strand, 12851068 - 12851010
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||    
T  12851068 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataa 12851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 480
Target Start/End: Complemental strand, 31640995 - 31640964
Alignment:
Q  449 attaagagcaatgctatatatcaagaaagatt 480  Q
    ||||||||||||||||||||||||||||||||    
T  31640995 attaagagcaatgctatatatcaagaaagatt 31640964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 517
Target Start/End: Original strand, 38899524 - 38899583
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||| |||||||||| |||||||| |  |||| |||||||||||||||||| |||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  3521806 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  6043311 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 8145639 - 8145579
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  8145639 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 8145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 22912856 - 22912916
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  22912856 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 22912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 25398504 - 25398444
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| ||||| |||||||||||| |||||||    
T  25398504 aatgctagatatcaagaatgattttataa-gaaaaattcaacaatgacatggcacaataatc 25398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 12835 - 12907
Alignment:
Q  447 aaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  12835 aaataaagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 6e-26; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 3574595 - 3574527
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  3574595 taagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 2754715 - 2754782
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  2754715 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 452 - 518
Target Start/End: Original strand, 11347266 - 11347332
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11347266 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 6041884 - 6041949
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 33113789 - 33113858
Alignment:
Q  450 ttaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  33113789 ttaagagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 37217118 - 37217053
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 3137481 - 3137414
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  3137481 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 3456064 - 3456129
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 30385011 - 30385076
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 48160905 - 48160970
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 34482977 - 34482910
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| |||||||||    
T  34482977 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 19650965 - 19650900
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19650965 gagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 9797093 - 9797029
Alignment:
Q  455 agcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 37522051 - 37522118
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||    
T  37522051 aagagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 42297352 - 42297407
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatg 508  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  42297352 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 42297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 22426410 - 22426344
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||| ||||||| |||||||||||||||| |||||||| || ||||||||||||||||||||    
T  22426410 agagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 8320649 - 8320584
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||    
T  8320649 gagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 33145713 - 33145777
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttatta-aaaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 36865093 - 36865027
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||| ||| |||||||||| | |||||||| ||||||||||||| |||||||||    
T  36865093 agagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 24343543 - 24343612
Alignment:
Q  450 ttaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||| | | | ||||||||||||||    
T  24343543 ttaagagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 8362110 - 8362045
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||| |   | ||| ||||| ||||||||||||||||||||||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 515
Target Start/End: Original strand, 41224233 - 41224294
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaat 515  Q
    ||||| |||||||||| |||||||||||| ||| ||||| |||||||||||||||| |||||    
T  41224233 gagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 26612784 - 26612848
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataa 517  Q
    ||||||||  |||||||||| ||||||||||| |  |||| ||||||||||||||||||||||||    
T  26612784 agagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    ||||||||||||||||||||| ||||  ||||||||||| |||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 33839529 - 33839596
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| ||||||| ||||||||||||||||  |||| || |||||| ||||| ||||||||||    
T  33839529 aagagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 42921154 - 42921197
Alignment:
Q  465 tatatcaagaaagattttatcatgaaaatttcaagaatgacatg 508  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatg 42921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 485
Target Start/End: Complemental strand, 47402664 - 47402630
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatc 485  Q
    |||||||||||||||||||||||||||||||||||    
T  47402664 taagagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  3137213 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  34482687 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||||| ||||  ||||||||||||||| || |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| |||||||||| ||||  |||||||||||||||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  463 tatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  457 caatgctatatatcaagaaagattttatcatgaaa 491  Q
    |||||||||||||||||||||||||||||| ||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 22426144 - 22426204
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  22426144 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 30385666 - 30385606
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  30385666 aatgctaaatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 33114060 - 33114000
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||||||||| |||||||    
T  33114060 aatgctagatatcaagaatgattttataa-gaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 36864831 - 36864892
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||||||||  |||  ||||||||||||||| || |||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  37522319 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 41224500 - 41224440
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| ||||| |||| ||||  |||||||||||||||||| |||||||    
T  41224500 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 41224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  482 tatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 46919153 - 46919100
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||| ||||||||||  |||  ||||| ||||||||||||||||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 23268130 - 23268062
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  23268130 taagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 9293643 - 9293576
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  9293643 aagagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 453 - 519
Target Start/End: Original strand, 35160756 - 35160822
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  35160756 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 21936081 - 21936146
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 10661888 - 10661952
Alignment:
Q  455 agcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 452 - 518
Target Start/End: Original strand, 13354844 - 13354910
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataat 518  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  13354844 aagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 519
Target Start/End: Original strand, 43330909 - 43330977
Alignment:
Q  451 taagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||||    
T  43330909 taagagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 31174901 - 31174834
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  31174901 aagaacaatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 7475574 - 7475508
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||||||    
T  7475574 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 453 - 519
Target Start/End: Complemental strand, 14941432 - 14941366
Alignment:
Q  453 agagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||||||||    
T  14941432 agagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 33380207 - 33380272
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  33380207 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 519
Target Start/End: Complemental strand, 21393751 - 21393688
Alignment:
Q  456 gcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||| ||||| ||| ||||| || ||||||||||||| |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 27847630 - 27847697
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||| ||||| |||||||||||||| | ||||  ||||||||||||||| ||||||||||    
T  27847630 aagagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 9723405 - 9723470
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||| |||||||||||||| | ||||  || |||||||||||| ||||||||||    
T  9723405 gagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  466 atatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||| |  |||| ||||||||||| ||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||||| ||||  ||||||||||||||| || |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  33380473 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 33380413  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  35161025 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 35160965  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  482 tatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 10662154 - 10662094
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| || |||||||    
T  10662154 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatgacacaataatc 10662094  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  23267861 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatc 23267921  T

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Target: scaffold0096 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 41009 - 41076
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  41009 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

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Target: scaffold0178 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 11621 - 11686
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

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Target: scaffold0085 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 47850 - 47915
Alignment:
Q  454 gagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

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Target: scaffold0204 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 4394 - 4461
Alignment:
Q  452 aagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  4394 aagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

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Target: scaffold0665 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 3060 - 3133
Alignment:
Q  446 aaaattaagagcaatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||| ||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  3060 aaaaataacagcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

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Target: scaffold0228 (Bit Score: 51; Significance: 6e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  465 tatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

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Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  465 tatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

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Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  465 tatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

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Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  16250 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  458 aatgctatatatcaagaaagattttatcatgaaaatttcaagaatgacatggcagaataatc 519  Q
    ||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||||||    
T  26202 aatgctagatatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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