View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1308_low_6 (Length: 595)
Name: NF1308_low_6
Description: NF1308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1308_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 85 - 457
Target Start/End: Original strand, 3472570 - 3472942
Alignment:
| Q |
85 |
cagagagagtgcattttaatttaatgtttgaattatgtgaaacaattgaaagatgatattgaagaatgaaattggtagagtgattgatgatacctaggga |
184 |
Q |
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| T |
3472570 |
cagagagagtgcattttaatttaatgtttgaattatgtgaaacaattgaaagatgatattgaagaatgaaattggtagagtgattgatgatacctaggga |
3472669 |
T |
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| Q |
185 |
gagaggagaaggtgggcatggttgatgatgaagagtaagaaccatgagagagtgatgaatcaaagagagagtgagagggtagggttaatatgtgacagtg |
284 |
Q |
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| T |
3472670 |
gagaggagaaggtgggcatggttgatgatgaagagtaagaaccatgagagagtgatgaatcaaagagagagtgagagggtagggttaatatgtgacagtg |
3472769 |
T |
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| Q |
285 |
aagagcacatggtttgtaagtgttggaaaatgaagaaagagtaaaaatataaatgtgtataagatgatggaaatgaaatgaagatgagtttgattttgca |
384 |
Q |
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| T |
3472770 |
aagagcacatggtttgtaagtgttggaaaatgaagaaagagtaaaaatataaatgtgtataagatgataaaaatgaaatgaagatgagtttgattttgca |
3472869 |
T |
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| Q |
385 |
tgtgaatttggtgaagttacgcaacgtagagtggatggtagtgttttgagaagagagagagtgttgtgttgtg |
457 |
Q |
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| T |
3472870 |
tgtgaatttggtgaagttacgcaacgtagagtggattgtagtgttttgggaagagagagagtgttgtgttgtg |
3472942 |
T |
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