View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13090_high_14 (Length: 341)

Name: NF13090_high_14
Description: NF13090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13090_high_14
NF13090_high_14
[»] chr8 (12 HSPs)
chr8 (174-218)||(40795369-40795413)
chr8 (173-216)||(39433401-39433444)
chr8 (176-216)||(2554239-2554279)
chr8 (179-218)||(24195246-24195285)
chr8 (176-218)||(17062364-17062406)
chr8 (176-218)||(17585952-17585994)
chr8 (176-218)||(18148827-18148869)
chr8 (173-210)||(12251590-12251627)
chr8 (173-210)||(39443581-39443618)
chr8 (174-218)||(6582281-6582325)
chr8 (176-220)||(15225799-15225843)
chr8 (174-218)||(17898071-17898115)
[»] chr3 (25 HSPs)
chr3 (175-219)||(25527862-25527906)
chr3 (173-210)||(22762396-22762433)
chr3 (173-216)||(36170117-36170160)
chr3 (183-218)||(42784958-42784993)
chr3 (182-247)||(7651186-7651254)
chr3 (176-218)||(38130984-38131026)
chr3 (176-218)||(38559921-38559963)
chr3 (172-218)||(53996289-53996335)
chr3 (173-218)||(10843806-10843851)
chr3 (173-218)||(19468442-19468487)
chr3 (173-218)||(23332641-23332686)
chr3 (173-218)||(36354544-36354589)
chr3 (181-218)||(38573598-38573635)
chr3 (174-219)||(43011314-43011359)
chr3 (174-206)||(1707785-1707817)
chr3 (174-218)||(3612207-3612251)
chr3 (182-218)||(5941319-5941355)
chr3 (174-218)||(7824799-7824843)
chr3 (174-218)||(7827500-7827544)
chr3 (174-218)||(7829888-7829932)
chr3 (182-218)||(8942017-8942053)
chr3 (184-247)||(17755123-17755189)
chr3 (184-247)||(19056443-19056509)
chr3 (176-216)||(28244131-28244171)
chr3 (180-216)||(36918899-36918935)
[»] chr1 (21 HSPs)
chr1 (174-210)||(4770661-4770697)
chr1 (176-218)||(12213987-12214029)
chr1 (174-216)||(41032923-41032965)
chr1 (179-216)||(11410624-11410661)
chr1 (177-218)||(32209863-32209904)
chr1 (174-218)||(28832196-28832240)
chr1 (175-210)||(5553034-5553069)
chr1 (179-218)||(10841897-10841936)
chr1 (179-210)||(15382852-15382883)
chr1 (173-216)||(21965919-21965962)
chr1 (175-218)||(35690205-35690248)
chr1 (182-216)||(7550896-7550930)
chr1 (173-219)||(26329146-26329192)
chr1 (176-218)||(27853349-27853391)
chr1 (176-218)||(51067919-51067961)
chr1 (173-210)||(6423795-6423832)
chr1 (185-218)||(17339218-17339251)
chr1 (173-218)||(29935974-29936019)
chr1 (173-218)||(44365973-44366018)
chr1 (176-216)||(23524818-23524858)
chr1 (174-218)||(36467050-36467094)
[»] chr7 (12 HSPs)
chr7 (177-216)||(2450575-2450614)
chr7 (174-218)||(3672577-3672621)
chr7 (174-218)||(43539129-43539173)
chr7 (174-216)||(27993056-27993098)
chr7 (180-218)||(34722046-34722084)
chr7 (173-218)||(28200410-28200455)
chr7 (173-210)||(38435959-38435996)
chr7 (173-210)||(42995267-42995304)
chr7 (182-218)||(429203-429239)
chr7 (176-247)||(5526719-5526793)
chr7 (174-218)||(8883545-8883589)
chr7 (182-210)||(26980969-26980997)
[»] chr4 (15 HSPs)
chr4 (171-218)||(19479502-19479549)
chr4 (175-218)||(24837498-24837541)
chr4 (173-210)||(44724374-44724411)
chr4 (175-215)||(39489599-39489639)
chr4 (174-216)||(35021494-35021536)
chr4 (177-218)||(11949688-11949729)
chr4 (173-210)||(26871719-26871756)
chr4 (182-218)||(6459949-6459985)
chr4 (182-218)||(7371573-7371609)
chr4 (172-216)||(32430150-32430194)
chr4 (182-218)||(32923255-32923291)
chr4 (176-220)||(35997993-35998037)
chr4 (176-216)||(38340347-38340387)
chr4 (182-218)||(40070993-40071029)
chr4 (182-210)||(56361847-56361875)
[»] chr2 (9 HSPs)
chr2 (173-216)||(1692737-1692780)
chr2 (173-218)||(8761589-8761634)
chr2 (173-218)||(37119283-37119328)
chr2 (180-218)||(19159939-19159977)
chr2 (181-218)||(9718393-9718430)
chr2 (177-218)||(10977084-10977125)
chr2 (177-218)||(19967413-19967454)
chr2 (182-218)||(9964491-9964527)
chr2 (174-218)||(41682412-41682456)
[»] chr6 (13 HSPs)
chr6 (176-218)||(13496110-13496152)
chr6 (175-247)||(2445292-2445367)
chr6 (176-247)||(9311923-9311997)
chr6 (173-216)||(18313924-18313967)
chr6 (176-210)||(21857084-21857118)
chr6 (177-218)||(4379510-4379551)
chr6 (173-218)||(12700446-12700491)
chr6 (175-247)||(24623310-24623385)
chr6 (177-218)||(28951394-28951435)
chr6 (173-201)||(1225192-1225220)
chr6 (174-218)||(9558440-9558484)
chr6 (182-218)||(11118686-11118722)
chr6 (182-218)||(12904342-12904378)
[»] chr5 (14 HSPs)
chr5 (168-218)||(42608890-42608940)
chr5 (176-217)||(33369439-33369480)
chr5 (182-218)||(13864344-13864380)
chr5 (176-218)||(18589892-18589934)
chr5 (176-218)||(22585646-22585688)
chr5 (176-218)||(25928908-25928950)
chr5 (173-210)||(9699919-9699956)
chr5 (173-210)||(10515352-10515389)
chr5 (175-216)||(24498577-24498618)
chr5 (173-218)||(26034633-26034678)
chr5 (173-214)||(28736893-28736934)
chr5 (173-218)||(40056615-40056660)
chr5 (182-218)||(13796330-13796366)
chr5 (176-247)||(29695009-29695083)
[»] scaffold0095 (1 HSPs)
scaffold0095 (173-210)||(148-185)
[»] scaffold0088 (1 HSPs)
scaffold0088 (173-210)||(55509-55546)
[»] scaffold0021 (1 HSPs)
scaffold0021 (175-216)||(161134-161175)


Alignment Details
Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 40795369 - 40795413
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  40795369 ttgtcattgtgagcttaactcagttggtatgaacaatacataata 40795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 39433401 - 39433444
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  39433401 tttgtcctcgtgagcttagctcagttgatatgaacaatacataa 39433444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 2554279 - 2554239
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  2554279 gtccttgtgagcttagctcagttgatatggacaatacataa 2554239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 24195246 - 24195285
Alignment:
Q  179 cttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  24195246 cttgtgaacttagctcagttgatatgaacaatacataata 24195285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 17062406 - 17062364
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| ||||||||||||||||||||||  |||||||||||||    
T  17062406 gtcctcgtgagcttaactcagttgatatagacaatacataata 17062364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 17585952 - 17585994
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| ||||||||||||||||||||||  |||||||||||||    
T  17585952 gtcctcgtgagcttaactcagttgatatagacaatacataata 17585994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 18148869 - 18148827
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  18148869 gtcctcgtgagcttaactcagttaatatgaacaatgcataata 18148827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 12251627 - 12251590
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  12251627 tttgtcctcgtgagcttaactcagttgataggaacaat 12251590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 39443581 - 39443618
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  39443581 tttgtcctcgtgagcttaactcagttgataggaacaat 39443618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 6582281 - 6582325
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| ||||||| ||||||||| ||||||| ||||||||||||||    
T  6582281 ttgttcttgtgaacttaactcaattgatattaacaatacataata 6582325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 15225799 - 15225843
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataatact 220  Q
    |||||||||||||||||||||||  |||| ||||| |||||||||    
T  15225799 gtccttgtgagcttaactcagttagtatggacaatgcataatact 15225843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 17898071 - 17898115
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| |||||||||||||||||| |||| |||| ||||||||    
T  17898071 ttgtcctagtgagcttaactcagttggtatggacaaaacataata 17898115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 25527906 - 25527862
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataatac 219  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  25527906 tgtccttgtgagcttaactcagttggtatgaacaattcataatac 25527862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 22762433 - 22762396
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||||||||||||||||||||||||| |||||||    
T  22762433 tttgtccttgtgagcttaactcagttgataggaacaat 22762396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 36170160 - 36170117
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  36170160 tttgtcctcgtgagcttaactcaattgatatgaacaatgcataa 36170117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 42784958 - 42784993
Alignment:
Q  183 tgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||| |||||||||||||    
T  42784958 tgagcttaactcagttgatatggacaatacataata 42784993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 7651186 - 7651254
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataatac---taagattcggggttcaaacgccgaccac 247  Q
    ||||||||||||||||||||| | ||||| |||| ||    |||| |||||||||||||||||||||||    
T  7651186 gtgagcttaactcagttgatagggacaatgcatagtatatataaggttcggggttcaaacgccgaccac 7651254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 38131026 - 38130984
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||||| |||| ||||| |||||||    
T  38131026 gtccttgtgagcttaactcagttggtatggacaatgcataata 38130984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 38559963 - 38559921
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||| ||||||||||| |||||||||| |||||||    
T  38559963 gtccttgtgagcgtaactcagttggtatgaacaatgcataata 38559921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 53996289 - 53996335
Alignment:
Q  172 gtttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||| |||||||| |||| ||||| |||||||    
T  53996289 gtttgtccttgtgagcttagctcagttggtatggacaatgcataata 53996335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 10843851 - 10843806
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||    
T  10843851 tttgttctcgtgagcttaactcagttggtatgaataatacataata 10843806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 19468442 - 19468487
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||| |||||||||||||||||||| |||| ||||| |||||||    
T  19468442 tttgtctttgtgagcttaactcagttggtatggacaatgcataata 19468487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 23332641 - 23332686
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||| |||| ||||||| |||||||||||||||| |||||||    
T  23332641 tttgtcctcgtgaacttaacttagttgatatgaacaatgcataata 23332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 36354589 - 36354544
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| |||||||||||| ||||||||||||||| |||| ||||||    
T  36354589 tttgttcttgtgagcttagctcagttgatatgaaaaatatataata 36354544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 38573635 - 38573598
Alignment:
Q  181 tgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  38573635 tgtgagcttaactcagttgataagaacaatgcataata 38573598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 43011314 - 43011359
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataatac 219  Q
    ||||||| |||||| |||||||||||||||  ||||||||||||||    
T  43011314 ttgtcctcgtgagcctaactcagttgatatagacaatacataatac 43011359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 1707817 - 1707785
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaa 206  Q
    |||||||||||||||||||||||||| ||||||    
T  1707817 ttgtccttgtgagcttaactcagttggtatgaa 1707785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 3612251 - 3612207
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||||    
T  3612251 ttgtccttgtgagcttagctcagttgatatggataatgcataata 3612207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 5941355 - 5941319
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||| |||||||||| |||||||    
T  5941355 gtgagcttaactcagttggtatgaacaatgcataata 5941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 7824799 - 7824843
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| ||||| ||||||||||||||||  |||||||||||||    
T  7824799 ttgtcctcgtgagtttaactcagttgatatagacaatacataata 7824843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 7827500 - 7827544
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  7827500 ttgtcctcgtgagtttaactcagttgatatggacaatgcataata 7827544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 7829888 - 7829932
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  7829888 ttgtcctcgtgagtttaactcagttgatatggacaatgcataata 7829932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 8942017 - 8942053
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||| |||||||||| |||||||    
T  8942017 gtgagcttaactcagttggtatgaacaatgcataata 8942053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 17755123 - 17755189
Alignment:
Q  184 gagcttaactcagttgatatgaacaatacataata---ctaagattcggggttcaaacgccgaccac 247  Q
    ||||||| ||||||||||| |||||||||||||||    |||| |||||||||||||  ||||||||    
T  17755123 gagcttagctcagttgataggaacaatacataatatatgtaaggttcggggttcaaattccgaccac 17755189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 19056443 - 19056509
Alignment:
Q  184 gagcttaactcagttgatatgaacaatacataata---ctaagattcggggttcaaacgccgaccac 247  Q
    ||||||| ||||||||||| |||||||||||||||    |||| |||||||||||||  ||||||||    
T  19056443 gagcttagctcagttgataggaacaatacataatatatgtaaggttcggggttcaaattccgaccac 19056509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 28244171 - 28244131
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||| |||||||||||||||||| |||||||||| |||||    
T  28244171 gtcctcgtgagcttaactcagttggtatgaacaatgcataa 28244131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 36918935 - 36918899
Alignment:
Q  180 ttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  36918935 ttgtgagcttaactcagttgataggaacaatgcataa 36918899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 4770697 - 4770661
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||||||||||||||||||||||||||||||||    
T  4770697 ttgtccttgtgagcttaactcagttgatatgaacaat 4770661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 12213987 - 12214029
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  12213987 gtccttgtgagcttagctcagttgataggaacaatacataata 12214029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 41032923 - 41032965
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  41032923 ttgtcctcgtgagcttaactcagttgatatgaacaatgcataa 41032965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 11410624 - 11410661
Alignment:
Q  179 cttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  11410624 cttgtgagcttaactcagttggtatgaacaatacataa 11410661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 32209904 - 32209863
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  32209904 tccttgtgagcttacctcagttgataggaacaatacataata 32209863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 28832240 - 28832196
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||    
T  28832240 ttgttcttgtgagcttaactcagttggtatgaacaatgcataata 28832196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 5553069 - 5553034
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||||| |||||||||||||||||||||||||    
T  5553069 tgtccttgtgggcttaactcagttgatatgaacaat 5553034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 10841897 - 10841936
Alignment:
Q  179 cttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  10841897 cttgtgagcttaactcagttgatatggacaatgcataata 10841936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 210
Target Start/End: Complemental strand, 15382883 - 15382852
Alignment:
Q  179 cttgtgagcttaactcagttgatatgaacaat 210  Q
    ||||||||||||||||||||||||||||||||    
T  15382883 cttgtgagcttaactcagttgatatgaacaat 15382852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 21965962 - 21965919
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||    
T  21965962 tttgtccttgtgagcttagctcagttgatatgaataatgcataa 21965919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 35690205 - 35690248
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||||||||| || ||| |||||||||||    
T  35690205 tgtccttgtgagcttaactcagttggtaggaataatacataata 35690248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 7550896 - 7550930
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||||||||||| |||||    
T  7550896 gtgagcttaactcagttgatatgaacaatgcataa 7550930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 26329192 - 26329146
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataatac 219  Q
    ||||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  26329192 tttgtccttgttagcttagctcagttgataagaacaatgcataatac 26329146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 27853349 - 27853391
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  27853349 gtcctcgtgagcttaactcagttggtatgaacaatgcataata 27853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 51067961 - 51067919
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  51067961 gtccttgtgagcttaactcagttggtaagaataatacataata 51067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 6423832 - 6423795
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  6423832 tttgtcctcgtgagcttaactcagttggtatgaacaat 6423795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 17339218 - 17339251
Alignment:
Q  185 agcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||| ||||||||||||||||||    
T  17339218 agcttaactcagttggtatgaacaatacataata 17339251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 29935974 - 29936019
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||| |||||||||||| |||| ||||| |||||||    
T  29935974 tttgtccttgtgagtttaactcagttggtatggacaatgcataata 29936019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 44366018 - 44365973
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||| ||||| |||||||||||| || |||||||||||||||    
T  44366018 tttgtcctcgtgagtttaactcagttggtaggaacaatacataata 44365973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 23524818 - 23524858
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  23524818 gtccttgtgagcttaactcagttgattggaacaatgcataa 23524858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 36467094 - 36467050
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||| ||| |||||||| ||||| |||||||    
T  36467094 ttgtccttgtgagcttaattcaattgatatggacaatgcataata 36467050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 2450575 - 2450614
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  2450575 tccttgtgagcttaactcagttggtatgaacaatacataa 2450614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 3672621 - 3672577
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  3672621 ttgtccttgtgagtttagctcagttgatatggacaatacataata 3672577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 43539173 - 43539129
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||    
T  43539173 ttgtccttgtgagcttagctcagttgataggaacaatgcataata 43539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 27993098 - 27993056
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  27993098 ttgtcctcgtgagcttaactcagttggtatgaacaatgcataa 27993056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 34722084 - 34722046
Alignment:
Q  180 ttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  34722084 ttgtgagcttaactcagttggtatgaacaatgcataata 34722046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 28200455 - 28200410
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||| | |||||||||||||||||| || |||||||||||||||    
T  28200455 tttgtcatcgtgagcttaactcagttggtaggaacaatacataata 28200410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 38435996 - 38435959
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  38435996 tttgtcctcgtgagcttaactcagttgataggaacaat 38435959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 42995267 - 42995304
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  42995267 tttgtcctcgtgagcttaactcagttgataggaacaat 42995304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 429239 - 429203
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||||||| | |||||||||||    
T  429239 gtgagcttaactcagttgatatggataatacataata 429203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 5526719 - 5526793
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataatac---taagattcggggttcaaacgccgaccac 247  Q
    ||||| ||||||||| |||||||| |||| ||||| |||||||    ||||||| ||||||||||| ||||||||    
T  5526719 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatataagatttggggttcaaaccccgaccac 5526793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 8883545 - 8883589
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| |||||||||||||||||| |||| ||||| |||||||    
T  8883545 ttgtcctcgtgagcttaactcagttggtatggacaatgcataata 8883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 26980997 - 26980969
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaat 210  Q
    |||||||||||||||||||||||||||||    
T  26980997 gtgagcttaactcagttgatatgaacaat 26980969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 19479549 - 19479502
Alignment:
Q  171 agtttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  19479549 agtttgtccttgtgagcttagctcagttaatatgaacaatgcataata 19479502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 24837541 - 24837498
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  24837541 tgtcctcgtgagcttaacttagttgatatgaacaatacataata 24837498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 44724374 - 44724411
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  44724374 tttgtccttgtgagcttaactcagttggtatgaacaat 44724411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 39489599 - 39489639
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacata 215  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  39489599 tgtccttgtgagcttaattcagttgataggaacaatacata 39489639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 35021536 - 35021494
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||    
T  35021536 ttgtcctcgtgagcttagctcagttgatatggacaatacataa 35021494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 11949729 - 11949688
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| ||||||||| ||||||||||| |||||||||||||||    
T  11949729 tcctcgtgagcttagctcagttgataagaacaatacataata 11949688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 26871756 - 26871719
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  26871756 tttgtcctcgtgagcttaactcagttgataggaacaat 26871719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 6459985 - 6459949
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  6459985 gtgagcttaactcagttgatatggacaatgcataata 6459949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 7371609 - 7371573
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||||| | |||||||||||||    
T  7371609 gtgagcttaactcagttgataaggacaatacataata 7371573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 32430194 - 32430150
Alignment:
Q  172 gtttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||| |||||||||||||||||  |||||||||| |||||    
T  32430194 gtttgtcctcgtgagcttaactcagttagtatgaacaatgcataa 32430150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 32923291 - 32923255
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||| |||||||||| |||||||    
T  32923291 gtgagcttaactcagttggtatgaacaatgcataata 32923255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 35997993 - 35998037
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataatact 220  Q
    ||||||||||| ||| ||||||||||||| ||||| |||||||||    
T  35997993 gtccttgtgagtttagctcagttgatatggacaatgcataatact 35998037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 38340387 - 38340347
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||| |||||||||||||||||| |||| |||||||||||    
T  38340387 gtcctcgtgagcttaactcagttggtatggacaatacataa 38340347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 40071029 - 40070993
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||| |||||||||| |||||||    
T  40071029 gtgagcttaactcagttggtatgaacaatgcataata 40070993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 56361875 - 56361847
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaat 210  Q
    |||||||||||||||||||||||||||||    
T  56361875 gtgagcttaactcagttgatatgaacaat 56361847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 1692780 - 1692737
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  1692780 tttgtccttgtgagcttaactcaattgatatgaacaatgcataa 1692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 8761634 - 8761589
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||    
T  8761634 tttgtcctcgtgagcttaactcagttggtatggacaatacataata 8761589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 37119328 - 37119283
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  37119328 tttgtcattgtgagtttaactcagttgatatgaacaatgcataata 37119283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 19159939 - 19159977
Alignment:
Q  180 ttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  19159939 ttgtaagcttaactcagttgatatgaacaatgcataata 19159977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 9718393 - 9718430
Alignment:
Q  181 tgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  9718393 tgtgagcttaactcagttgataagaacaatgcataata 9718430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 10977125 - 10977084
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| ||||||||||||| ||||||||||| |||||||||||    
T  10977125 tcctcgtgagcttaactcggttgatatgaaaaatacataata 10977084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 19967413 - 19967454
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  19967413 tcctcgtgagcttagctcagttgatatgaacaatgcataata 19967454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 9964491 - 9964527
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  9964491 gtgagtttaactcagttgatatgaacaatacgtaata 9964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 41682456 - 41682412
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||||||||||| ||| || ||| |||||||    
T  41682456 ttgtccttgtgagcttaactcagttggtataaataatgcataata 41682412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 13496110 - 13496152
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  13496110 gtcctcgtgagcttaactcagttgatatgaacaatgcataata 13496152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 2445292 - 2445367
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataata---ctaagattcggggttcaaacgccgaccac 247  Q
    |||||| || |||||||||||||||||||||||||| |||||||     |||||||||||||| ||| ||||||||    
T  2445292 tgtcctcgtaagcttaactcagttgatatgaacaatgcataatatatacaagattcggggttcgaaccccgaccac 2445367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 9311997 - 9311923
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata---ctaagattcggggttcaaacgccgaccac 247  Q
    ||||| |||||||||||||||||| |||||| |||||||||||    ||||||| | ||||||||| ||||||||    
T  9311997 gtcctcgtgagcttaactcagttggtatgaataatacataatatatgtaagatttgaggttcaaaccccgaccac 9311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 18313924 - 18313967
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||    
T  18313924 tttgtcctcgtgagcttaactcagttgataggaacaatgcataa 18313967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 21857118 - 21857084
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||||||||||||||||||| ||||||||||    
T  21857118 gtccttgtgagcttaactcagttggtatgaacaat 21857084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 4379551 - 4379510
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| |||||||||||||||||| || |||||||||||||||    
T  4379551 tcctcgtgagcttaactcagttggtaggaacaatacataata 4379510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 12700491 - 12700446
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||  ||||||| |||||||||| |||||||    
T  12700491 tttgtccttgtgagcttagttcagttggtatgaacaatgcataata 12700446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 24623385 - 24623310
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataata---ctaagattcggggttcaaacgccgaccac 247  Q
    |||| ||||||| ||| ||||||||||||| ||||| |||||||    |||| |||||||||||||| ||||||||    
T  24623385 tgtctttgtgagtttagctcagttgatatggacaatgcataatatatgtaaggttcggggttcaaaccccgaccac 24623310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 28951394 - 28951435
Alignment:
Q  177 tccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| |||||||||||||||||| |||||||||| |||||||    
T  28951394 tcctcgtgagcttaactcagttggtatgaacaatgcataata 28951435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 1225192 - 1225220
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgat 201  Q
    |||||||||||||||||||||||||||||    
T  1225192 tttgtccttgtgagcttaactcagttgat 1225220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 9558440 - 9558484
Alignment:
Q  174 ttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  9558440 ttgtcctcgtgagcttagctcggttggtatgaacaatacataata 9558484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 11118722 - 11118686
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  11118722 gtgagcttagctcagtagatatgaacaatacataata 11118686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 12904378 - 12904342
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  12904378 gtgagcttacctcagttgatatgaacaatgcataata 12904342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 42608940 - 42608890
Alignment:
Q  168 aaaagtttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||| ||| ||||||| |||||||||||||||||||||||||| |||||||    
T  42608940 aaaaatttatccttgtaagcttaactcagttgatatgaacaatgcataata 42608890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 33369480 - 33369439
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataat 217  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  33369480 gtcctcgtgagcttaactcagttggtatgaacaatacataat 33369439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 13864344 - 13864380
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13864344 gtgagcttaactcagttggtatgaacaatacataata 13864380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 18589934 - 18589892
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  18589934 gtcctcgtgagcttaactcagttggtatgaacaatgcataata 18589892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 22585646 - 22585688
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||    
T  22585646 gtcctcgtgggcttaactcagttgatatgaacaatgcataata 22585688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 25928908 - 25928950
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| |||||||||||||| |||||||| |||||||||||||    
T  25928908 gtcctcgtgagcttaactcaattgatatggacaatacataata 25928950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 9699919 - 9699956
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  9699919 tttgtcctcgtgagcttaactcagttgataggaacaat 9699956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 10515352 - 10515389
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  10515352 tttgtccttgtgagcttaacttagttgatatggacaat 10515389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 24498577 - 24498618
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    |||||| ||||||||||||||||||||||||| ||| |||||    
T  24498577 tgtcctcgtgagcttaactcagttgatatgaataatgcataa 24498618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 26034678 - 26034633
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||    
T  26034678 tttgttctcgtgagcttaactcagttggtatgaacaatgcataata 26034633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 28736893 - 28736934
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacat 214  Q
    |||||||| |||||||||||||||||| |||| |||||||||    
T  28736893 tttgtcctcgtgagcttaactcagttgttatggacaatacat 28736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 40056660 - 40056615
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaatacataata 218  Q
    ||||||||||||||||||||||||||| || | ||||| |||||||    
T  40056660 tttgtccttgtgagcttaactcagttggtaaggacaatgcataata 40056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 13796330 - 13796366
Alignment:
Q  182 gtgagcttaactcagttgatatgaacaatacataata 218  Q
    |||||||||||||||| |||||||||||| |||||||    
T  13796330 gtgagcttaactcagtcgatatgaacaatgcataata 13796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 29695009 - 29695083
Alignment:
Q  176 gtccttgtgagcttaactcagttgatatgaacaatacataata---ctaagattcggggttcaaacgccgaccac 247  Q
    ||||| |||| |||||||||||||||||| ||||| |||||||    |||| |||| ||||||||| ||||||||    
T  29695009 gtcctcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaaccccgaccac 29695083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 148 - 185
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  148 tttgtcctcgtgagcttaactcagttgataggaacaat 185  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 55546 - 55509
Alignment:
Q  173 tttgtccttgtgagcttaactcagttgatatgaacaat 210  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  55546 tttgtccttgtgagctttactcagttgataggaacaat 55509  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 161134 - 161175
Alignment:
Q  175 tgtccttgtgagcttaactcagttgatatgaacaatacataa 216  Q
    ||||||||||||||||||||||||| |||| ||||| |||||    
T  161134 tgtccttgtgagcttaactcagttggtatggacaatgcataa 161175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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