View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13090_low_7 (Length: 477)

Name: NF13090_low_7
Description: NF13090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13090_low_7
NF13090_low_7
[»] chr8 (42 HSPs)
chr8 (28-463)||(11637469-11637902)
chr8 (343-463)||(616783-616903)
chr8 (343-463)||(623176-623296)
chr8 (342-463)||(14237279-14237400)
chr8 (343-463)||(42587390-42587510)
chr8 (349-463)||(40494390-40494504)
chr8 (348-460)||(3100640-3100752)
chr8 (348-463)||(32998455-32998570)
chr8 (350-463)||(18044432-18044545)
chr8 (343-463)||(36642000-36642121)
chr8 (343-463)||(35403516-35403636)
chr8 (349-463)||(2766190-2766304)
chr8 (349-463)||(41263816-41263930)
chr8 (342-463)||(132016-132137)
chr8 (350-463)||(38957177-38957290)
chr8 (354-463)||(13216863-13216972)
chr8 (348-461)||(4270236-4270349)
chr8 (343-456)||(5878317-5878429)
chr8 (343-463)||(8394346-8394466)
chr8 (350-463)||(22489415-22489529)
chr8 (350-445)||(24524107-24524202)
chr8 (343-449)||(36167076-36167182)
chr8 (350-462)||(6414108-6414220)
chr8 (343-463)||(33700215-33700336)
chr8 (374-459)||(5173282-5173367)
chr8 (350-407)||(13217219-13217276)
chr8 (348-463)||(38497088-38497192)
chr8 (416-463)||(40716665-40716712)
chr8 (373-463)||(3370398-3370488)
chr8 (341-463)||(18035098-18035220)
chr8 (352-462)||(18090338-18090447)
chr8 (352-463)||(9632164-9632275)
chr8 (354-463)||(40204864-40204973)
chr8 (427-463)||(32855604-32855640)
chr8 (416-462)||(24729928-24729974)
chr8 (117-211)||(39068409-39068502)
chr8 (343-372)||(2766048-2766077)
chr8 (343-371)||(2540180-2540208)
chr8 (117-212)||(10286469-10286565)
chr8 (343-371)||(10646592-10646620)
chr8 (343-371)||(10647271-10647299)
chr8 (117-165)||(15589259-15589307)
[»] chr7 (57 HSPs)
chr7 (342-463)||(36623307-36623428)
chr7 (342-463)||(47156026-47156147)
chr7 (343-463)||(28061657-28061777)
chr7 (343-466)||(41897988-41898111)
chr7 (343-463)||(38851989-38852109)
chr7 (349-463)||(40256063-40256177)
chr7 (350-463)||(42890485-42890598)
chr7 (343-463)||(40090060-40090180)
chr7 (343-463)||(48602436-48602556)
chr7 (343-463)||(16778505-16778625)
chr7 (343-463)||(20885103-20885223)
chr7 (343-463)||(36585109-36585229)
chr7 (343-463)||(32431500-32431620)
chr7 (350-465)||(7457862-7457976)
chr7 (358-463)||(44732027-44732132)
chr7 (347-463)||(7438907-7439023)
chr7 (349-463)||(25566690-25566803)
chr7 (350-463)||(30342081-30342194)
chr7 (343-463)||(46103512-46103625)
chr7 (352-463)||(8683827-8683935)
chr7 (350-463)||(39130068-39130181)
chr7 (343-463)||(35117126-35117245)
chr7 (343-463)||(42877386-42877506)
chr7 (352-463)||(46479838-46479949)
chr7 (343-463)||(3851077-3851194)
chr7 (353-463)||(11502722-11502832)
chr7 (350-459)||(6174843-6174952)
chr7 (343-443)||(46322127-46322227)
chr7 (352-462)||(36341629-36341739)
chr7 (350-459)||(7169133-7169242)
chr7 (348-459)||(26161601-26161712)
chr7 (344-463)||(27045550-27045669)
chr7 (342-460)||(41088586-41088704)
chr7 (350-463)||(41134630-41134738)
chr7 (343-463)||(2198602-2198722)
chr7 (353-463)||(5788519-5788629)
chr7 (343-463)||(4131645-4131765)
chr7 (343-463)||(6766692-6766812)
chr7 (343-459)||(5529011-5529127)
chr7 (343-441)||(42662187-42662284)
chr7 (349-461)||(35570193-35570310)
chr7 (343-463)||(3785520-3785640)
chr7 (350-463)||(49110612-49110725)
chr7 (416-463)||(21379817-21379864)
chr7 (391-459)||(34750550-34750618)
chr7 (416-463)||(49101955-49102002)
chr7 (117-212)||(24333369-24333466)
chr7 (416-462)||(47525979-47526025)
chr7 (401-462)||(38767202-38767263)
chr7 (340-372)||(16778738-16778770)
chr7 (343-459)||(16870626-16870742)
chr7 (416-456)||(19120679-19120719)
chr7 (416-456)||(23707572-23707612)
chr7 (416-456)||(37467456-37467496)
chr7 (416-463)||(4048876-4048923)
chr7 (350-409)||(23707714-23707773)
chr7 (117-186)||(40857346-40857414)
[»] chr4 (63 HSPs)
chr4 (342-463)||(55209716-55209837)
chr4 (343-463)||(26169986-26170106)
chr4 (343-463)||(38416792-38416912)
chr4 (343-468)||(35381031-35381156)
chr4 (350-463)||(44232219-44232332)
chr4 (343-463)||(29830343-29830463)
chr4 (343-463)||(54330832-54330952)
chr4 (342-459)||(2760873-2760990)
chr4 (350-463)||(43967730-43967843)
chr4 (349-463)||(25296722-25296836)
chr4 (343-463)||(35686373-35686493)
chr4 (343-463)||(47386428-47386548)
chr4 (353-463)||(12240320-12240430)
chr4 (343-463)||(17610280-17610400)
chr4 (343-462)||(38716887-38717005)
chr4 (350-463)||(25918210-25918323)
chr4 (352-463)||(12625260-12625371)
chr4 (343-463)||(31010214-31010334)
chr4 (352-463)||(50205752-50205863)
chr4 (348-450)||(55800839-55800941)
chr4 (343-463)||(19433500-19433624)
chr4 (348-463)||(55191829-55191944)
chr4 (373-463)||(45291862-45291952)
chr4 (342-463)||(26125707-26125828)
chr4 (350-462)||(36523111-36523223)
chr4 (343-459)||(50620828-50620944)
chr4 (348-463)||(17446775-17446890)
chr4 (342-463)||(27407759-27407882)
chr4 (348-453)||(3036985-3037090)
chr4 (350-463)||(39307703-39307816)
chr4 (354-456)||(2571031-2571133)
chr4 (350-463)||(9029591-9029707)
chr4 (367-463)||(4467661-4467756)
chr4 (370-463)||(19595732-19595825)
chr4 (343-462)||(38721337-38721456)
chr4 (350-462)||(5428585-5428695)
chr4 (350-463)||(7614622-7614735)
chr4 (349-460)||(54610868-54610980)
chr4 (343-463)||(20875389-20875509)
chr4 (343-463)||(37767100-37767220)
chr4 (416-463)||(14144599-14144646)
chr4 (354-449)||(25101731-25101826)
chr4 (352-463)||(30446307-30446417)
chr4 (349-444)||(34652208-34652303)
chr4 (381-463)||(19903792-19903874)
chr4 (354-459)||(23360189-23360291)
chr4 (353-462)||(56079992-56080102)
chr4 (374-459)||(10550455-10550542)
chr4 (428-464)||(34652157-34652193)
chr4 (416-463)||(27344090-27344137)
chr4 (354-462)||(27755730-27755842)
chr4 (348-459)||(34316526-34316636)
chr4 (416-463)||(55091329-55091376)
chr4 (416-462)||(50181133-50181179)
chr4 (359-461)||(56297846-56297948)
chr4 (350-454)||(29051691-29051793)
chr4 (416-453)||(51456506-51456543)
chr4 (149-212)||(9696329-9696392)
chr4 (386-459)||(29585991-29586063)
chr4 (374-463)||(32871501-32871590)
chr4 (402-463)||(35064119-35064179)
chr4 (343-372)||(35380894-35380923)
chr4 (416-457)||(52227098-52227139)
[»] chr3 (44 HSPs)
chr3 (342-463)||(13499477-13499598)
chr3 (343-463)||(42490338-42490458)
chr3 (342-463)||(42761625-42761746)
chr3 (343-463)||(27010616-27010736)
chr3 (343-463)||(39866283-39866403)
chr3 (349-463)||(21797562-21797676)
chr3 (350-463)||(27334873-27334986)
chr3 (343-463)||(20765196-20765316)
chr3 (348-461)||(34912286-34912399)
chr3 (342-463)||(54507640-54507761)
chr3 (343-463)||(21005293-21005413)
chr3 (343-463)||(33415799-33415919)
chr3 (342-463)||(19823899-19824014)
chr3 (354-463)||(33803532-33803642)
chr3 (349-463)||(43467884-43467998)
chr3 (351-463)||(6910342-6910454)
chr3 (343-463)||(36227545-36227665)
chr3 (350-463)||(43181497-43181611)
chr3 (384-463)||(30213845-30213924)
chr3 (373-463)||(38137854-38137944)
chr3 (352-462)||(44561793-44561903)
chr3 (350-432)||(45613580-45613662)
chr3 (349-459)||(25527412-25527520)
chr3 (353-463)||(15332948-15333058)
chr3 (339-463)||(48334663-48334786)
chr3 (346-463)||(22786633-22786748)
chr3 (346-463)||(22782269-22782384)
chr3 (354-459)||(37766058-37766168)
chr3 (353-459)||(41252909-41253015)
chr3 (350-410)||(32220870-32220930)
chr3 (349-459)||(23940508-23940618)
chr3 (413-463)||(52167279-52167329)
chr3 (374-459)||(3430420-3430505)
chr3 (413-462)||(44856416-44856465)
chr3 (399-463)||(17643787-17643851)
chr3 (416-463)||(41751552-41751599)
chr3 (343-462)||(42469610-42469727)
chr3 (399-455)||(23224306-23224363)
chr3 (413-461)||(33128063-33128111)
chr3 (115-212)||(48489430-48489529)
chr3 (416-463)||(15568077-15568124)
chr3 (382-448)||(27813445-27813511)
chr3 (339-371)||(36881278-36881310)
chr3 (416-459)||(47164598-47164642)
[»] chr5 (39 HSPs)
chr5 (343-463)||(978077-978197)
chr5 (343-463)||(8086172-8086292)
chr5 (347-463)||(14634299-14634415)
chr5 (343-463)||(33387220-33387340)
chr5 (352-463)||(30355016-30355127)
chr5 (343-463)||(9502769-9502889)
chr5 (337-463)||(18094223-18094349)
chr5 (343-463)||(40156198-40156318)
chr5 (352-463)||(3472419-3472530)
chr5 (353-463)||(33587611-33587721)
chr5 (336-456)||(34111955-34112075)
chr5 (346-459)||(11251117-11251230)
chr5 (354-463)||(11785867-11785977)
chr5 (342-463)||(24992280-24992401)
chr5 (343-459)||(38916396-38916512)
chr5 (353-463)||(7224175-7224285)
chr5 (354-459)||(39776641-39776746)
chr5 (341-463)||(9050718-9050829)
chr5 (343-463)||(12007774-12007894)
chr5 (350-463)||(24916388-24916503)
chr5 (416-463)||(32400400-32400447)
chr5 (402-463)||(11761125-11761186)
chr5 (354-463)||(27109700-27109808)
chr5 (348-460)||(32017218-32017330)
chr5 (353-456)||(27579579-27579681)
chr5 (416-460)||(3422355-3422399)
chr5 (416-463)||(18998760-18998807)
chr5 (353-455)||(20692541-20692641)
chr5 (395-463)||(12447560-12447626)
chr5 (374-463)||(12456782-12456871)
chr5 (416-463)||(12359963-12360010)
chr5 (348-399)||(12448278-12448329)
chr5 (353-419)||(18598554-18598620)
chr5 (416-459)||(17476950-17476993)
chr5 (416-463)||(26387021-26387068)
chr5 (384-462)||(31197833-31197911)
chr5 (117-181)||(1277497-1277562)
chr5 (416-445)||(37495683-37495712)
chr5 (416-452)||(13812120-13812156)
[»] chr2 (40 HSPs)
chr2 (343-463)||(8042164-8042284)
chr2 (343-463)||(19141208-19141328)
chr2 (348-463)||(5405001-5405116)
chr2 (350-463)||(7608056-7608169)
chr2 (343-459)||(39358146-39358262)
chr2 (349-463)||(44365163-44365277)
chr2 (343-459)||(2183103-2183219)
chr2 (350-463)||(6223073-6223186)
chr2 (357-463)||(11841735-11841841)
chr2 (343-463)||(7799847-7799967)
chr2 (343-456)||(19262680-19262793)
chr2 (349-463)||(32774597-32774711)
chr2 (354-459)||(36072185-36072290)
chr2 (354-463)||(33607387-33607492)
chr2 (354-456)||(43444689-43444791)
chr2 (350-463)||(36719466-36719573)
chr2 (378-463)||(44644905-44644990)
chr2 (353-463)||(11931701-11931811)
chr2 (358-462)||(16865069-16865173)
chr2 (343-462)||(24093679-24093799)
chr2 (354-459)||(42133763-42133868)
chr2 (375-463)||(22839069-22839157)
chr2 (343-463)||(24251960-24252079)
chr2 (388-463)||(13125287-13125362)
chr2 (401-463)||(9172288-9172350)
chr2 (374-459)||(36177723-36177809)
chr2 (401-463)||(38292010-38292072)
chr2 (416-461)||(38839146-38839191)
chr2 (354-450)||(9006939-9007035)
chr2 (416-463)||(31610795-31610842)
chr2 (343-462)||(9553864-9553978)
chr2 (117-186)||(10202224-10202294)
chr2 (343-425)||(13598442-13598523)
chr2 (401-462)||(13117467-13117528)
chr2 (350-463)||(19165925-19166037)
chr2 (416-460)||(4835728-4835772)
chr2 (399-453)||(3837271-3837325)
chr2 (416-458)||(31904027-31904069)
chr2 (417-462)||(3013839-3013884)
chr2 (427-459)||(34248559-34248591)
[»] chr6 (42 HSPs)
chr6 (343-463)||(19088100-19088220)
chr6 (343-463)||(24624083-24624203)
chr6 (343-463)||(32414821-32414941)
chr6 (343-463)||(4147931-4148051)
chr6 (343-463)||(6563226-6563346)
chr6 (349-463)||(22054778-22054892)
chr6 (343-463)||(18668830-18668950)
chr6 (343-463)||(15383072-15383192)
chr6 (343-463)||(17213926-17214046)
chr6 (343-463)||(32671816-32671936)
chr6 (353-463)||(17257793-17257903)
chr6 (353-463)||(20226440-20226550)
chr6 (353-463)||(22120424-22120534)
chr6 (350-463)||(3989406-3989518)
chr6 (342-463)||(25475955-25476071)
chr6 (373-463)||(1040854-1040944)
chr6 (351-456)||(31569175-31569280)
chr6 (354-463)||(28477764-28477873)
chr6 (350-463)||(20437155-20437269)
chr6 (353-463)||(29790216-29790326)
chr6 (354-460)||(29693894-29694000)
chr6 (350-463)||(10520475-10520588)
chr6 (343-463)||(15337488-15337608)
chr6 (349-459)||(31869714-31869824)
chr6 (349-462)||(4440856-4440969)
chr6 (354-459)||(21540775-21540880)
chr6 (371-463)||(24955538-24955630)
chr6 (352-462)||(17155158-17155268)
chr6 (354-463)||(12225986-12226095)
chr6 (399-463)||(2360046-2360110)
chr6 (416-459)||(3623856-3623899)
chr6 (416-463)||(5495322-5495369)
chr6 (416-463)||(23158051-23158098)
chr6 (374-456)||(19240741-19240823)
chr6 (343-391)||(16193052-16193100)
chr6 (416-459)||(8101673-8101716)
chr6 (380-459)||(10298719-10298798)
chr6 (403-461)||(1260490-1260548)
chr6 (343-377)||(32420748-32420782)
chr6 (352-453)||(14214065-14214166)
chr6 (434-463)||(16193024-16193053)
chr6 (172-212)||(2747578-2747618)
[»] chr1 (44 HSPs)
chr1 (343-463)||(6402552-6402672)
chr1 (343-463)||(11641209-11641329)
chr1 (343-463)||(40771914-40772034)
chr1 (340-463)||(16120582-16120705)
chr1 (354-463)||(36757628-36757737)
chr1 (343-459)||(6766372-6766488)
chr1 (343-463)||(17305954-17306074)
chr1 (350-463)||(30003540-30003653)
chr1 (343-463)||(30701718-30701838)
chr1 (348-459)||(27292645-27292756)
chr1 (348-463)||(40977630-40977745)
chr1 (341-463)||(36399096-36399218)
chr1 (343-463)||(42788684-42788804)
chr1 (343-463)||(52024026-52024146)
chr1 (343-463)||(24321259-24321381)
chr1 (350-463)||(42735307-42735423)
chr1 (350-463)||(9342787-9342900)
chr1 (356-463)||(15912478-15912585)
chr1 (348-463)||(26910081-26910196)
chr1 (349-459)||(4302124-4302234)
chr1 (352-462)||(28030824-28030934)
chr1 (354-459)||(38153423-38153528)
chr1 (343-462)||(44647856-44647975)
chr1 (349-463)||(15382568-15382682)
chr1 (358-459)||(30385291-30385392)
chr1 (359-455)||(48375018-48375114)
chr1 (416-463)||(22575729-22575776)
chr1 (343-450)||(44644510-44644617)
chr1 (353-463)||(3485349-3485459)
chr1 (350-459)||(42367442-42367543)
chr1 (349-463)||(40800529-40800643)
chr1 (399-463)||(7568628-7568692)
chr1 (416-463)||(31444996-31445043)
chr1 (429-463)||(25171240-25171274)
chr1 (350-459)||(27984563-27984671)
chr1 (350-455)||(34634914-34635019)
chr1 (418-453)||(323990-324025)
chr1 (416-463)||(14777105-14777152)
chr1 (126-212)||(236598-236684)
chr1 (416-462)||(9881349-9881395)
chr1 (416-462)||(19895289-19895335)
chr1 (117-182)||(49948299-49948365)
chr1 (343-372)||(17306187-17306216)
chr1 (381-463)||(16689862-16689941)
[»] scaffold0003 (1 HSPs)
scaffold0003 (343-463)||(161979-162099)
[»] scaffold0022 (1 HSPs)
scaffold0022 (343-463)||(100789-100909)
[»] scaffold0018 (1 HSPs)
scaffold0018 (352-463)||(67911-68022)
[»] scaffold0295 (2 HSPs)
scaffold0295 (343-463)||(13859-13979)
scaffold0295 (343-404)||(9372-9433)
[»] scaffold0056 (1 HSPs)
scaffold0056 (342-463)||(70960-71080)
[»] scaffold0225 (1 HSPs)
scaffold0225 (343-463)||(8975-9095)
[»] scaffold0029 (1 HSPs)
scaffold0029 (343-463)||(138172-138292)
[»] scaffold0099 (1 HSPs)
scaffold0099 (342-459)||(28798-28917)
[»] scaffold0262 (1 HSPs)
scaffold0262 (343-463)||(22780-22900)
[»] scaffold0595 (1 HSPs)
scaffold0595 (385-456)||(3990-4061)
[»] scaffold0009 (2 HSPs)
scaffold0009 (416-463)||(53562-53609)
scaffold0009 (416-463)||(217017-217064)
[»] scaffold0608 (1 HSPs)
scaffold0608 (416-462)||(1593-1639)


Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 28 - 463
Target Start/End: Original strand, 11637469 - 11637902
Alignment:
Q  28 taaacaaaaatgaattataatttctaatgaataggaattgaactctcggtgtttcgaagtatacaatcnnnnnnnnnnnnnnnnnnnacatagaagaaat 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||                   |||||||||||||    
T  11637469 taaacaaaaatgaattataatttctaatgaataggaattgaactctcggtgttttgaagtttacaatctttttttttttttttttt-acatagaagaaat 11637567  T
Q  128 gacaaagtcatcataaattcgcacataaagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgacannnnnnnnccagttg 227  Q
    ||||||  ||||||||| ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||        |||||||    
T  11637568 gacaaaaccatcataaactcgcacacaaagtggaggtactggggttcgaatcccgatcaaaacgtttggcctaacaatttcgacatttttt--ccagttg 11637665  T
Q  228 aactaggacttatctgactcaaagtttacaatctaatggtaaaacatatcttacatccaaatct-ttctaccattcaaatttagtctttaaatgaatttt 326  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11637666 agctaggacttatctgactcgaagtttacaatctaatggtaaaacatattttacatccaaatcacttctaccattcaaatttagtctttaaatgaatttt 11637765  T
Q  327 attcaccgttgttatttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaa 426  Q
    ||||| ||||| |||||||||| || ||||||||||  ||||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||     
T  11637766 attcatcgttgctatttacttcatctgtttcaaaatgtatgtccaatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactag 11637865  T
Q  427 tatataaatacaaatattagcatgtaagatgttgttt 463  Q
    | ||||||||||| |||||||||||||||||||||||    
T  11637866 tgtataaatacaagtattagcatgtaagatgttgttt 11637902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 616783 - 616903
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  616783 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 616882  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  616883 ttagcatgtaagatgttgttt 616903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 623176 - 623296
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  623176 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 623275  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  623276 ttagcatgtaagatgttgttt 623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 14237279 - 14237400
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||| |||||||||||||    
T  14237279 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaat 14237378  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  14237379 attagcatgtaagatgttgttt 14237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 42587510 - 42587390
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  42587510 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 42587411  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  42587410 ttagcatgtaagatgttgttt 42587390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 40494390 - 40494504
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  40494390 ctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca 40494489  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  40494490 tgtaagatgttgttt 40494504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 348 - 460
Target Start/End: Complemental strand, 3100752 - 3100640
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  3100752 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagc 3100653  T
Q  448 atgtaagatgttg 460  Q
    |||||||||||||    
T  3100652 atgtaagatgttg 3100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 32998455 - 32998570
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||| |||||||||||||||||||    
T  32998455 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagc 32998554  T
Q  448 atgtaagatgttgttt 463  Q
    ||||||||||||||||    
T  32998555 atgtaagatgttgttt 32998570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 18044432 - 18044545
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||| |||||||||||||||||||||    
T  18044432 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 18044531  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  18044532 gtaagatgttgttt 18044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 36642121 - 36642000
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttga-cagtactttttaactaatatataaatacaaat 441  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||||||||    
T  36642121 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaat 36642022  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  36642021 attagcatgtaagatgttgttt 36642000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 35403516 - 35403636
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||| |||||||||| |||    
T  35403516 tacttcatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagata 35403615  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||| |||||||||||||||||    
T  35403616 ttaacatgtaagatgttgttt 35403636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 2766304 - 2766190
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||  ||||||||||||||| |||||||| |||||||||||    
T  2766304 ctccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagca 2766205  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  2766204 tgtaagatgttgttt 2766190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 41263816 - 41263930
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||||||||    
T  41263816 ctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagca 41263915  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  41263916 tgtaagatgttgttt 41263930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 132016 - 132137
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||   || |||||||||||| |||||||||||||    
T  132016 ttactccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaat 132115  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  132116 attagcatgtaagatgttgttt 132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 38957177 - 38957290
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||  |||||||||||||||||||||    
T  38957177 tccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcat 38957276  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  38957277 gtaagatgttgttt 38957290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 13216972 - 13216863
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||| ||||||||||||| ||    
T  13216972 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaa 13216873  T
Q  454 gatgttgttt 463  Q
    ||||||||||    
T  13216872 gatgttgttt 13216863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 348 - 461
Target Start/End: Complemental strand, 4270349 - 4270236
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||||| |    
T  4270349 cctccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaac 4270250  T
Q  448 atgtaagatgttgt 461  Q
    |||||| |||||||    
T  4270249 atgtaatatgttgt 4270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 5878317 - 5878429
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtcca-tttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 5878415  T
Q  443 ttagcatgtaagat 456  Q
    ||||||||||||||    
T  5878416 ttagcatgtaagat 5878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 8394346 - 8394466
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||   | |||||||||||| ||||| ||||||||    
T  8394346 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaata 8394445  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||| || |||||||||||||    
T  8394446 ttagtatttaagatgttgttt 8394466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 22489529 - 22489415
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattag-ca 448  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||  |    
T  22489529 tccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaa 22489430  T
Q  449 tgtaagatgttgttt 463  Q
    || ||||||||||||    
T  22489429 tgcaagatgttgttt 22489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 24524107 - 24524202
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatatta 445  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||  ||||||||||||||| |||||||||||||||||    
T  24524107 tccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 36167076 - 36167182
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||||||||   |||||||||||||| ||||||||||||| |||||||||   |||||||| |||||| ||||||||||||||    
T  36167076 tactccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaata 36167175  T
Q  443 ttagcat 449  Q
    |||||||    
T  36167176 ttagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 6414220 - 6414108
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| |||||| |||||  |||||||||||||||||||||||| ||| ||||||||||  |||||||||| |||||||||||| |||| ||| | ||    
T  6414220 tccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtat 6414121  T
Q  450 gtaagatgttgtt 462  Q
    |||| ||||||||    
T  6414120 gtaaaatgttgtt 6414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 33700336 - 33700215
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtc-caatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    |||| |||||||||||||||||||||| |||  ||| ||||| ||||||||||| |   ||||||||||  || ||||||||||||||||||||||||||    
T  33700336 tactccctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaat 33700237  T
Q  442 attagcatgtaagatgttgttt 463  Q
     |||| | ||||||||||||||    
T  33700236 gttagtaagtaagatgttgttt 33700215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 5173282 - 5173367
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||||| ||||||||  |||||||||||||   || | |||||||||||||||||||||||||||| |||||||||||||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagatgtt 5173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 13217276 - 13217219
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttacttt 407  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  13217276 tccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 38497088 - 38497192
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||||||||| |||||           ||||||||||| |||||||||||||||||||    
T  38497088 cctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgacttact-----------ttttaactaatgtataaatacaaatattagc 38497176  T
Q  448 atgtaagatgttgttt 463  Q
    ||| ||||||||||||    
T  38497177 atggaagatgttgttt 38497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 40716712 - 40716665
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagatgttgttt 40716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 3370488 - 3370398
Alignment:
Q  373 tttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||| ||| ||||| ||| ||||||||||  || ||||||| |||||||||||||||||| |||  ||||||||| ||||||    
T  3370488 tttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgttt 3370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 463
Target Start/End: Original strand, 18035098 - 18035220
Alignment:
Q  341 tttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaa 440  Q
    |||||||||||| |||||||||| |||||  | |||| |||||| || ||||| |  |   ||| |||||  || |||||||||||||||||||| ||||    
T  18035098 tttacttcctccttttcaaaatatatgtcgcaattttacaatgtacattattcgcacggcgtacattgaccataatttttaactaatatataaatgcaaa 18035197  T
Q  441 tattagcatgtaagatgttgttt 463  Q
    | |||||||||||||||||||||    
T  18035198 tgttagcatgtaagatgttgttt 18035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 18090338 - 18090447
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||| ||| |||||||| ||||||| |||||||||||||| |  ||| ||| |||||   || ||||||||||||||||||||| |||| ||||||| |    
T  18090338 cgttttaaattacatgtcgaattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgttagcatat 18090436  T
Q  452 aagatgttgtt 462  Q
    |||||||||||    
T  18090437 aagatgttgtt 18090447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 9632164 - 9632275
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttacttt-gacagtactttttaactaatatataaatacaaatattagcatg 450  Q
    ||||||||||||||||||  | |||| ||||||| ||||||||| |  |||| ||| | || || ||||| ||||| |||||||||| ||| ||||||||    
T  9632164 cgtttcaaaatacatgtcgcaattttacaatgtgtactattcacatagtttattttagtca-tattttttcactaacatataaatactaatgttagcatg 9632262  T
Q  451 taagatgttgttt 463  Q
    |||||||||||||    
T  9632263 taagatgttgttt 9632275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 40204973 - 40204864
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||| |||||||||||  | ||||  |||||||||||||||    | |||||||||   || ||||| |||||||||||||||||||| |||||| ||||    
T  40204973 tttctaaatacatgtcgtaattttaaaatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatgttagcaggtaa 40204874  T
Q  454 gatgttgttt 463  Q
    | ||||||||    
T  40204873 gttgttgttt 40204864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 463
Target Start/End: Complemental strand, 32855640 - 32855604
Alignment:
Q  427 tatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32855640 tatataaatacaaatgttagcatgtaagatgttgttt 32855604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 24729928 - 24729974
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    |||| ||||||||||| | || |||||||||||||||||||||||||    
T  24729928 ttttgaactaatatatgagtataaatattagcatgtaagatgttgtt 24729974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 39068409 - 39068502
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacataaagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgac 211  Q
    ||||| |||||||||||| ||| ||||| ||  ||| || ||||||||| ||| |||||||||| |||||  | ||| |||||||||||||||||    
T  39068409 atagacgaaatgacaaagccattataaactcatacacaa-gtggaggtattgaggttcgaatcctgatcatgacgttcggcctaacaattttgac 39068502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Original strand, 2766048 - 2766077
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaa 372  Q
    ||||||||||||||||||||||||||||||    
T  2766048 tacttcctccgtttcaaaatacatgtccaa 2766077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 371
Target Start/End: Complemental strand, 2540208 - 2540180
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtcca 371  Q
    |||||||||||||||||||||||||||||    
T  2540208 tacttcctccgtttcaaaatacatgtcca 2540180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 10286469 - 10286565
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacata-aagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgaca 212  Q
    ||||| |||||||||||||||| ||||| || |||||| |||||||| ||| |  ||||||||||| ||||   | || || |||||||||||||||    
T  10286469 atagacgaaatgacaaagtcattataaactcacacatacaagtggagataccggggttcgaatcccaatcacggtattcggtctaacaattttgaca 10286565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 371
Target Start/End: Original strand, 10646592 - 10646620
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtcca 371  Q
    |||||||||||||||||||||||||||||    
T  10646592 tacttcctccgtttcaaaatacatgtcca 10646620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 371
Target Start/End: Complemental strand, 10647299 - 10647271
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtcca 371  Q
    |||||||||||||||||||||||||||||    
T  10647299 tacttcctccgtttcaaaatacatgtcca 10647271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 15589259 - 15589307
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacataaagtggaggta 165  Q
    ||||| || |||||||| |||||||||| || |||||||||||||||||    
T  15589259 atagacgagatgacaaattcatcataaactcacacataaagtggaggta 15589307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 7e-53; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 36623307 - 36623428
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  36623307 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 36623406  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  36623407 attagcatgtaagatgttgttt 36623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 47156026 - 47156147
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  47156026 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 47156125  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  47156126 attagcatgtaagatgttgttt 47156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 28061777 - 28061657
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  28061777 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 28061678  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  28061677 ttagcatgtaagatgttgttt 28061657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 466
Target Start/End: Original strand, 41897988 - 41898111
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||    
T  41897988 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaata 41898087  T
Q  443 ttagcatgtaagatgttgtttcat 466  Q
    ||||||||||||||||||||||||    
T  41898088 ttagcatgtaagatgttgtttcat 41898111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 38852109 - 38851989
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  38852109 tactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 38852010  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||| ||||||    
T  38852009 ttagcatgtaagatattgttt 38851989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 40256063 - 40256177
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  40256063 ctccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 40256162  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  40256163 tgtaagatgttgttt 40256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 42890598 - 42890485
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  42890598 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcat 42890499  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  42890498 gtaagatgttgttt 42890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 40090180 - 40090060
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  40090180 tactccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40090081  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  40090080 ttagcatgtaagatgttgttt 40090060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 48602436 - 48602556
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  48602436 tactccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 48602535  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  48602536 ttagcatgtaagatgttgttt 48602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 16778505 - 16778625
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||  || |||||||||||| ||||||||||||||    
T  16778505 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaata 16778604  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  16778605 ttagcatgtaagatgttgttt 16778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 20885103 - 20885223
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 20885202  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  20885203 ttagcatgtaagatgttgttt 20885223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 36585109 - 36585229
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||  ||||||| ||||||| ||||||||||||||    
T  36585109 tacttcctccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaata 36585208  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  36585209 ttagcatgtaagatgttgttt 36585229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 32431620 - 32431500
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  32431620 tactccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 32431521  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||| ||||||||||||||||    
T  32431520 ttagtatgtaagatgttgttt 32431500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 350 - 465
Target Start/End: Complemental strand, 7457976 - 7457862
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| | ||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  7457976 tccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatattagcat 7457878  T
Q  450 gtaagatgttgtttca 465  Q
    ||||||||||||||||    
T  7457877 gtaagatgttgtttca 7457862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 44732027 - 44732132
Alignment:
Q  358 aaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatg 457  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  44732027 aaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatg 44732126  T
Q  458 ttgttt 463  Q
    ||||||    
T  44732127 ttgttt 44732132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 7438907 - 7439023
Alignment:
Q  347 tcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattag 446  Q
    ||||| ||||||||||||||||| |||||||||||| |||| ||||||||||| ||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  7438907 tcctctgtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattag 7439006  T
Q  447 catgtaagatgttgttt 463  Q
    |||||||||||||||||    
T  7439007 catgtaagatgttgttt 7439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 25566803 - 25566690
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| |||||||| ||| ||||||||||||||||    
T  25566803 ctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagca 25566705  T
Q  449 tgtaagatgttgttt 463  Q
    ||| |||||||||||    
T  25566704 tgtgagatgttgttt 25566690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 30342081 - 30342194
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||| ||    
T  30342081 tccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtat 30342180  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||| ||||    
T  30342181 gtaagatgtcgttt 30342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 46103625 - 46103512
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||       ||| ||||||||||  ||||||||||||||||||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcact-------tgacttactttgaccatactttttaactaatatataaatacaaata 46103533  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  46103532 ttagcatgtaagatgttgttt 46103512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 8683827 - 8683935
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||       
T  8683827 cgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca--- 8683923  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  8683924 aagatgttgttt 8683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 39130181 - 39130068
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| ||||||||| |  ||||||||||||||||||||||||||||| || |||||||  || |||||||||||| |||||||||||||||||||||    
T  39130181 tccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcat 39130082  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  39130081 gtaagatgttgttt 39130068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 35117126 - 35117245
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| ||||||| ||| ||||||||||||| |||||||||||||||| ||||||||||  ||| ||||||||||| |||||||| |||||    
T  35117126 tactccctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatac-ttttaactaatgtataaatataaata 35117224  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  35117225 ttagcatgtaagatgttgttt 35117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 42877386 - 42877506
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||| | || | ||||||||||  ||||||||||||||| |||||||| |||||    
T  42877386 tactccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaata 42877485  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||| ||||||||||||||||    
T  42877486 ttagaatgtaagatgttgttt 42877506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 46479838 - 46479949
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    |||||||||||||||||  ||||||| ||||||||||||||| ||||| ||||||||||   | |||||||||||| |||||||||||||||||||||||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  46479938 aagatgttgttt 46479949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 3851077 - 3851194
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||   ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  3851077 tacttcatccgtctcaaaatatatgtccaatttttgcaatgtgca---ttcacttgacttactttgacaatactttttaactaatgtataaatacaaata 3851173  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||| || ||||||| ||||||    
T  3851174 ttaacacgtaagatattgttt 3851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 11502832 - 11502722
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||||||||||||| |||||||| |||| |||| | |||||||||   ||||||||||||||| ||||||||||||||||||||||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T
Q  453 agatgttgttt 463  Q
    |||||| ||||    
T  11502732 agatgtcgttt 11502722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 6174843 - 6174952
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||| ||||  || |||||||||||| |||||||||||| ||||||||    
T  6174843 tccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcat 6174942  T
Q  450 gtaagatgtt 459  Q
    ||||||||||    
T  6174943 gtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 343 - 443
Target Start/End: Complemental strand, 46322227 - 46322127
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| ||| ||||||||||    
T  46322227 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaata 46322128  T
Q  443 t 443  Q
    |    
T  46322127 t 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 36341629 - 36341739
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||| ||| ||| ||  |||||||||||||| ||||||||| |||| |||| ||||    
T  36341629 cgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgttagaatgt 36341728  T
Q  452 aagatgttgtt 462  Q
    |||||||||||    
T  36341729 aagatgttgtt 36341739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 7169133 - 7169242
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||||  | ||||||||||||   ||||||| ||||||||||||||  || |||||||||||||||||||||||||||||| |||    
T  7169133 tccgtttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaatattaacat 7169232  T
Q  450 gtaagatgtt 459  Q
     |||||||||    
T  7169233 ataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 459
Target Start/End: Original strand, 26161601 - 26161712
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||| ||||||||||||||||  |||| |  |||| ||||||||||| ||||||| ||||||  | |||||||||||||||||||||||||||||||||    
T  26161601 cctccatttcaaaatacatgtcacatttgtataatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagc 26161700  T
Q  448 atgtaagatgtt 459  Q
    |||||| |||||    
T  26161701 atgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 27045669 - 27045550
Alignment:
Q  344 acttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatat 443  Q
    ||||| |||||||||||||||||||   | |||| ||||||  ||||||||| || |||||||||||  || |||||||||||||||||||||||||| |    
T  27045669 acttcatccgtttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgt 27045570  T
Q  444 tagcatgtaagatgttgttt 463  Q
    |||||| |||||||||||||    
T  27045569 tagcatataagatgttgttt 27045550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 342 - 460
Target Start/End: Original strand, 41088586 - 41088704
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| ||||| ||||||||||||||||||| |||| |||| |||||| ||||  ||| ||||||||||  || |||||||||||| ||||||| |||||    
T  41088586 ttactccctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaat 41088685  T
Q  442 attagcatgtaagatgttg 460  Q
    |||| ||||||||||||||    
T  41088686 attaacatgtaagatgttg 41088704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 41134738 - 41134630
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| ||||||||||| |||||||| ||||||| |||||||| |||| ||||||||||  ||     |||||||| |||||||||||||||||||||    
T  41134738 tccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaatattagcat 41134644  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  41134643 gtaagatgttgttt 41134630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 2198602 - 2198722
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||| ||||  ||| ||||||||||| ||||||||  ||||||| |||||   ||||||||||||||| ||||||||||||||    
T  2198602 tactccctccgttttaaaatagatgtgtaatatttgcaatgtgtactattcatctgatttattttgaacatactttttaactaatgtataaatacaaata 2198701  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||| || ||||||||||||||    
T  2198702 ttaacaagtaagatgttgttt 2198722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 5788629 - 5788519
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||| |||||||||||| ||||||||  ||| |||||||||| |||| ||||||| |   |||||||| |||||| |||||||||||||||||| |||||    
T  5788629 gtttaaaaatacatgtctaatttttgtgatgagcactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgta 5788530  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  5788529 agatgttgttt 5788519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 4131765 - 4131645
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| |||||||||||||| |||||  | |||| ||||||  ||||||||| | | ||||||| ||  || |||||||||||||||||||||||||      
T  4131765 tacttcatccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaag 4131666  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  4131665 ttagcatgtaagatgttgttt 4131645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 6766812 - 6766692
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||  | |||| |||| |||| ||||||| | | ||| ||||||  || |||||||||||| ||||||| |||||     
T  6766812 tactccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaatg 6766713  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  6766712 ttagcatgtaagatgttgttt 6766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 5529011 - 5529127
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||||||||||||||||| | |||| |||||| ||||||| || |   ||| ||||||  || ||||||||||||||| ||||| ||||     
T  5529011 tacttcatccgtttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatg 5529110  T
Q  443 ttagcatgtaagatgtt 459  Q
    |||||||||||||||||    
T  5529111 ttagcatgtaagatgtt 5529127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 441
Target Start/End: Original strand, 42662187 - 42662284
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    |||||| ||||||||||||||||||||  | |||||||||||| | ||||||| |  || ||||||||  |||||||||||||||||||||||||||||    
T  42662187 tacttcttccgtttcaaaatacatgtcgcaattttgcaatgtgtattattcacattctt-actttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 461
Target Start/End: Complemental strand, 35570310 - 35570193
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtacttttt-----aactaatatataaatacaaatat 443  Q
    |||||||||||||||||||||  | |||| |||||||||||||||||   | ||||||||||  || |||||     |||||||||| |||||||||| |    
T  35570310 ctccgtttcaaaatacatgtcgcaattttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaatacaaattt 35570211  T
Q  444 tagcatgtaagatgttgt 461  Q
    ||||||||||||||||||    
T  35570210 tagcatgtaagatgttgt 35570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 3785520 - 3785640
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||||||||||||||||||||| ||  | |||  |||| |||||||||||  |  |||||||||||  || ||||||||||||||||||||||||||     
T  3785520 tacttcctccgtttcaaaatacatatcataatttcacaatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatg 3785619  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||| ||  | ||||||||||    
T  3785620 ttagtatacaggatgttgttt 3785640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 49110725 - 49110612
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| ||||||||||||  | ||||  |||||| ||||||||  ||||||||||||||  || |||||||||||||||| ||||||||| |||  ||    
T  49110725 tccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgttatgat 49110626  T
Q  450 gtaagatgttgttt 463  Q
    |||| || ||||||    
T  49110625 gtaaaatattgttt 49110612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 21379817 - 21379864
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagatgttgttt 21379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 34750550 - 34750618
Alignment:
Q  391 ttcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    ||||| ||| ||||||||||  |||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  34750550 ttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagatgtt 34750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 49102002 - 49101955
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  49102002 tttttaactaatacataaatacaaatttttgcatgtaagatgttgttt 49101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 24333466 - 24333369
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcaca--taaagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgaca 212  Q
    |||||||| ||||||||  |||||||| ||||||||  ||||||||||||||||  ||||||| ||||||||  | | | ||||||||||||| ||||    
T  24333466 atagaagagatgacaaaaccatcataagttcgcacacataaagtggaggtactggagttcgaaccccgatcatgacgctcggcctaacaatttcgaca 24333369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 462
Target Start/End: Complemental strand, 47526025 - 47525979
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||||    
T  47526025 tttttaactaatatataaatacaaatgttagcatttaagatcttgtt 47525979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 38767263 - 38767202
Alignment:
Q  401 ttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||||||  || |||||||||||||||||||||||||| | || || ||||||||||||    
T  38767263 ttactttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgtt 38767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 16778770 - 16778738
Alignment:
Q  340 atttacttcctccgtttcaaaatacatgtccaa 372  Q
    |||||||||||||||||||||||||||||||||    
T  16778770 atttacttcctccgtttcaaaatacatgtccaa 16778738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 459
Target Start/End: Complemental strand, 16870742 - 16870626
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    ||||||||| ||| |||||||||||||    |||| |||| |||||||||||  | | ||||||||||  || || |||||||||||||||||| ||||     
T  16870742 tacttcctctgttccaaaatacatgtcgcggttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataaatg 16870643  T
Q  443 ttagcatgtaagatgtt 459  Q
    || ||| |||| |||||    
T  16870642 tttgcacgtaaaatgtt 16870626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 19120719 - 19120679
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagat 456  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagat 19120679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 23707612 - 23707572
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagat 456  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagat 23707572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 37467496 - 37467456
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagat 456  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  37467496 tttttaactaatatataaatacaaatgttagcatttaagat 37467456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 4048923 - 4048876
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||||||  |||| |||||| ||||||||    
T  4048923 tttttaactaatatataaatacaaatgctagcttgtaagttgttgttt 4048876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 23707773 - 23707714
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttga 409  Q
    ||||||| |||||| |||  ||||||||||||| ||| ||||||| ||||||||||||||    
T  23707773 tccgttttaaaatatatgatcaatttttgcaatttgcgctattcatttgatttactttga 23707714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 40857346 - 40857414
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacataaagtggaggtactgacgttcgaatcccgatca 186  Q
    ||||| ||||||||||||| || |||||||| ||||| |||||||||||| |  ||||||| ||||||||    
T  40857346 atagacgaaatgacaaagttattataaattcacacat-aagtggaggtaccggggttcgaaccccgatca 40857414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 7e-53; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 342 - 463
Target Start/End: Complemental strand, 55209837 - 55209716
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  55209837 ttactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaat 55209738  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  55209737 attagcatgtaagatgttgttt 55209716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 26169986 - 26170106
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 26170085  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  26170086 ttagcatgtaagatgttgttt 26170106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 38416912 - 38416792
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  38416912 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 38416813  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  38416812 ttagcatgtaagatgttgttt 38416792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 343 - 468
Target Start/End: Complemental strand, 35381156 - 35381031
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  35381156 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 35381057  T
Q  443 ttagcatgtaagatgttgtttcatct 468  Q
    ||||||||||||||||||||| ||||    
T  35381056 ttagcatgtaagatgttgtttgatct 35381031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 44232332 - 44232219
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  44232332 tccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 44232233  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  44232232 gtaagatgttgttt 44232219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 29830343 - 29830463
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 29830442  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  29830443 ttagcatgtaagatgttgttt 29830463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 54330952 - 54330832
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  54330952 tactccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaata 54330853  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  54330852 ttagcatgtaagatgttgttt 54330832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 2760990 - 2760873
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  2760990 ttactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaat 2760891  T
Q  442 attagcatgtaagatgtt 459  Q
    ||||||||||||||||||    
T  2760890 attagcatgtaagatgtt 2760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 43967730 - 43967843
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  43967730 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 43967829  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  43967830 gtaagatgttgttt 43967843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 25296836 - 25296722
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  25296836 ctccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 25296737  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  25296736 tgtaagatgttgttt 25296722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 35686373 - 35686493
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||| ||||||||||||||    
T  35686373 tactccctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaata 35686472  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||| |||||||||||||||||    
T  35686473 ttatcatgtaagatgttgttt 35686493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 47386548 - 47386428
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||    
T  47386548 tactccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 47386449  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  47386448 ttagcatgtaagatgttgttt 47386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 12240430 - 12240320
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  12240330 agatgttgttt 12240320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 17610280 - 17610400
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || |||||| ||||| ||||||||||||||    
T  17610280 tactccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaata 17610379  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  17610380 ttagcatgtaagatgttgttt 17610400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 462
Target Start/End: Original strand, 38716887 - 38717005
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  38716887 tactccctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaa-ttgacttactttgaccatactttttaactaatgtataaatacaaata 38716985  T
Q  443 ttagcatgtaagatgttgtt 462  Q
    ||||||||||||||||||||    
T  38716986 ttagcatgtaagatgttgtt 38717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 25918210 - 25918323
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||||||| ||| |||||||| ||||||||||||    
T  25918210 tccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcat 25918309  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  25918310 gtaagatgttgttt 25918323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 12625260 - 12625371
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  12625260 cgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 12625359  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  12625360 aagatgttgttt 12625371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 31010214 - 31010334
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||| |||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||  ||||||||||||||| |||||||| |||||    
T  31010214 tactccctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaata 31010313  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||| ||||||    
T  31010314 ttagcatgtaagatattgttt 31010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 50205752 - 50205863
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    |||||||||||||||||| | |||||| ||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||  ||    
T  50205752 cgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagctcgt 50205851  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  50205852 aagatgttgttt 50205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 348 - 450
Target Start/End: Original strand, 55800839 - 55800941
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||    
T  55800839 cctccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 55800938  T
Q  448 atg 450  Q
    |||    
T  55800939 atg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 19433624 - 19433500
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgac----agtactttttaactaatatataaataca 438  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||      ||||||||||||| | ||||||||||    
T  19433624 tactccctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaataca 19433525  T
Q  439 aatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||    
T  19433524 aatattagcatgtaagatgttgttt 19433500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 55191829 - 55191944
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||  |||||||||| |||| | |||||||||||||||||    
T  55191829 cctccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagc 55191928  T
Q  448 atgtaagatgttgttt 463  Q
    ||| || |||||||||    
T  55191929 atgcaaaatgttgttt 55191944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 45291862 - 45291952
Alignment:
Q  373 tttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||| ||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 45291952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 26125707 - 26125828
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||| |  | |||||||| |||| |||| ||||||||||| ||||||||||  || |||||||||||| |||||||||||||    
T  26125707 ttactccctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaat 26125806  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  26125807 attagcatgtaagatgttgttt 26125828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 36523223 - 36523111
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||| |||||  ||||||||||| ||||||||| || ||| ||||||||||  ||||||||||||||||||||||||||||| ||| |||    
T  36523223 tccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgttaacat 36523124  T
Q  450 gtaagatgttgtt 462  Q
    |||||||||||||    
T  36523123 gtaagatgttgtt 36523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 343 - 459
Target Start/End: Complemental strand, 50620944 - 50620828
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||| |||||| |||||||||||| ||||| |||||||||||||| | ||||||||||  ||| ||||||||||| ||||||||| ||||    
T  50620944 tacttcgtccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaata 50620845  T
Q  443 ttagcatgtaagatgtt 459  Q
    |||||||||||||||||    
T  50620844 ttagcatgtaagatgtt 50620828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 17446890 - 17446775
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||| ||| |||||| ||||||||||||| |||||||||||||||| |||| | ||||||||  ||| ||||||||||| ||||||||||||||||| |    
T  17446890 cctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatattaac 17446791  T
Q  448 atgtaagatgttgttt 463  Q
    ||||||||||||||||    
T  17446790 atgtaagatgttgttt 17446775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 463
Target Start/End: Complemental strand, 27407882 - 27407759
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| ||||| |||||||||||||| |  ||||||||| |||| ||||||||| | | ||||||||||  |||||||||||||||||||||||||||||    
T  27407882 ttactccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaat 27407783  T
Q  442 attagca--tgtaagatgttgttt 463  Q
    |||||||  |||||||||||||||    
T  27407782 attagcatgtgtaagatgttgttt 27407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 3036985 - 3037090
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||| |||||||||||||||||  | || | ||||||| ||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  3036985 cctctgtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagc 3037084  T
Q  448 atgtaa 453  Q
    ||||||    
T  3037085 atgtaa 3037090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 39307703 - 39307816
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||||  ||||||||||| | | |||||||| ||| |||||||||   ||||||||||||||||||||||||||||| |||| ||    
T  39307703 tccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgttagtat 39307802  T
Q  450 gtaagatgttgttt 463  Q
    |||| |||||||||    
T  39307803 gtaaaatgttgttt 39307816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 354 - 456
Target Start/End: Complemental strand, 2571133 - 2571031
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  ||||||  |||||||| ||||||| ||||||| ||||||  || |||||||||||||||||||||||||| |||||||||||    
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  454 gat 456  Q
    |||    
T  2571033 gat 2571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 9029707 - 9029591
Alignment:
Q  350 tccgtttcaaaatacatgtccaatt---tttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattag 446  Q
    ||||||| |||||||||||||||||   |||||||| || |||||| |||| | ||||||||||  ||||||||||||||| ||||||||||||||||||    
T  9029707 tccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaaatattag 9029608  T
Q  447 catgtaagatgttgttt 463  Q
    || ||||||| ||||||    
T  9029607 cacgtaagatattgttt 9029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 463
Target Start/End: Complemental strand, 4467756 - 4467661
Alignment:
Q  367 gtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||  |||||||| |||| |||||| || |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4467756 gtccaatttttt-aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 4467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 370 - 463
Target Start/End: Original strand, 19595732 - 19595825
Alignment:
Q  370 caatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||| |||| |||||||||||||||| ||||||| ||  |||| |||||||||| ||||||||||||||||||||||||| || ||||||    
T  19595732 caatttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgttt 19595825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 462
Target Start/End: Original strand, 38721337 - 38721456
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| ||| ||||||||||||  |||||| ||||||| | ||||||| ||| ||| |||||   || |||||||| |||||||||||||||||     
T  38721337 tactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatg 38721436  T
Q  443 ttagcatgtaagatgttgtt 462  Q
    ||||||||||||||||||||    
T  38721437 ttagcatgtaagatgttgtt 38721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 5428585 - 5428695
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||| ||| |||| |||||  |||||||||||||  | ||||||| ||||  || |||    
T  5428585 tccgtttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaacta--acataaatataaatgctatcat 5428682  T
Q  450 gtaagatgttgtt 462  Q
    |||||||||||||    
T  5428683 gtaagatgttgtt 5428695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 7614622 - 7614735
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||||  | |||| |||| |  | || |||| ||| ||| ||||||  || |||||||||||||||||||||||||| |||||||    
T  7614622 tccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaatgttagcat 7614721  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  7614722 gtaagatgttgttt 7614735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 460
Target Start/End: Original strand, 54610868 - 54610980
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcact-attcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||||||||||||| ||||  |||||||||||||| |||| |||||||||| ||||||| |   || ||||||| |||| |||||||||| |||||||     
T  54610868 ctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaatacagatattagt 54610967  T
Q  448 atgtaagatgttg 460  Q
    |||||||||||||    
T  54610968 atgtaagatgttg 54610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 20875509 - 20875389
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| || ||||||||||||||||   | ||||  |||||||||||||||  | ||||||||||||  || ||||||||||||||||||||  ||||     
T  20875509 tacttcatctgtttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatg 20875410  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    || |||| |||||||||||||    
T  20875409 tttgcatataagatgttgttt 20875389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 37767220 - 37767100
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||  |||||  | ||||| ||| ||||||||| || ||| ||||||||||  |||||||||||  ||||||||||||||||     
T  37767220 tactccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaatg 37767121  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||| ||||||||| ||||||    
T  37767120 ttagaatgtaagatattgttt 37767100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 14144646 - 14144599
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14144646 tttttaactaatatataaatacaaatattagtatgtaagatgttgttt 14144599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 25101731 - 25101826
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||||   |||||||||||||| | |||| |  ||||||| ||||||  |||||||||||||| |||||||| |||||||||||||    
T  25101731 tttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaaatattagcat 25101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 30446307 - 30446417
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||| ||||||  || |||| ||| |||| ||||||| ||| ||||||||||  || ||||| |||||||||||||||||||| ||||| |||    
T  30446307 cgtttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgt 30446405  T
Q  452 aagatgttgttt 463  Q
    || |||||||||    
T  30446406 aaaatgttgttt 30446417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 444
Target Start/End: Complemental strand, 34652303 - 34652208
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatatt 444  Q
    |||||||||||||||||||||  ||||||| |||||| |||||| ||  || |||||| |||  || ||||||||||| |||||||||||||||||    
T  34652303 ctccgtttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 19903874 - 19903792
Alignment:
Q  381 atgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||| |||||| | ||||||||||||  ||  ||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  19903874 atgtgcacgattcacataatttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgttt 19903792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 23360189 - 23360291
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  ||||||||||| |||||||||||  ||| ||||||||||  || |||||||||||||||| ||||||||| || ||| |||     
T  23360189 tttcaaaatacatgtcgcatttttgcaatatgcactattca--tgacttactttgac-ctattttttaactaatatatgaatacaaatgttggcaagtat 23360285  T
Q  454 gatgtt 459  Q
    ||||||    
T  23360286 gatgtt 23360291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 462
Target Start/End: Original strand, 56079992 - 56080102
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatac-aaatattagcatgt 451  Q
    ||||| |||||||||||  |||||   |||||||||||||| | | ||||||||||||  || ||||||||||||||||| |||| |||| ||| ||| |    
T  56079992 gtttctaaatacatgtcacattttgataatgtgcactattcgcataatttactttgactatattttttaactaatatatacatacaaaatgttatcatat 56080091  T
Q  452 aagatgttgtt 462  Q
    |||||||||||    
T  56080092 aagatgttgtt 56080102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 10550455 - 10550542
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagta--ctttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||| |||| |||||||||||| || |||||||| ||  ||   ||||||||||||||||||||| |||| |||||||||||||||||    
T  10550455 ttttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatgtaagatgtt 10550542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 34652193 - 34652157
Alignment:
Q  428 atataaatacaaatattagcatgtaagatgttgtttc 464  Q
    |||||||||||||||||||||||||||||||||||||    
T  34652193 atataaatacaaatattagcatgtaagatgttgtttc 34652157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 27344137 - 27344090
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  27344137 tttttaactaatatataaataaaaatattaacatataagatgttgttt 27344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 462
Target Start/End: Original strand, 27755730 - 27755842
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaa----tatataaatacaaatattagcat 449  Q
    ||||||||||||||||  ||||||| ||||| || | ||||  | | ||| ||||||  ||||||||||||||    ||||||||||||||| ||||||     
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcac 27755829  T
Q  450 gtaagatgttgtt 462  Q
    |||||||||||||    
T  27755830 gtaagatgttgtt 27755842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 459
Target Start/End: Original strand, 34316526 - 34316636
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||| || |||||| |||||  |||||| || ||||||||||| |  ||| |||||||||   || || ||||||||||||||||||||||| |||||    
T  34316526 cctccgatttaaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgttagc 34316624  T
Q  448 atgtaagatgtt 459  Q
    || |||||||||    
T  34316625 atataagatgtt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 55091376 - 55091329
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  55091376 tttttaattaatatataaatacaaatgttagtatgtaagatgttgttt 55091329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 50181133 - 50181179
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||    
T  50181133 tttttaattaatgtataaatacaaatattagcatgtaagatattgtt 50181179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 461
Target Start/End: Complemental strand, 56297948 - 56297846
Alignment:
Q  359 aaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgt 458  Q
    |||||||||||  |||||| |||||| || ||||||| | | ||  ||||||  || || ||||||||||||||||||||||| ||||||| ||| ||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgt 56297849  T
Q  459 tgt 461  Q
    |||    
T  56297848 tgt 56297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 29051691 - 29051793
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| |||||||||||   | |||| |||| | || ||||||| | | ||||||||||  || ||||||||||||||||||||||||  ||||||||    
T  29051691 tccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa--attagcat 29051788  T
Q  450 gtaag 454  Q
    |||||    
T  29051789 gtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||||||||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 9696329 - 9696392
Alignment:
Q  149 cacataaagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgaca 212  Q
    |||||||||||||||||| || ||||||| |||||||| || ||| | ||||||||||| ||||    
T  9696329 cacataaagtggaggtaccgaggttcgaaccccgatcataacgttcgacctaacaatttcgaca 9696392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Complemental strand, 29586063 - 29585991
Alignment:
Q  386 cactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||| | | ||||||||||| || ||||||| |||||| ||||||||||| ||| ||||||| |||||    
T  29586063 cactattcacataacttactttgaca-tattttttaattaatatgtaaatacaaatgttaacatgtaaaatgtt 29585991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 463
Target Start/End: Complemental strand, 32871590 - 32871501
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||| ||| ||| |||||||||||| ||  |||||   || |||||||||||||| ||||||||||| | || ||||| ||||||||||    
T  32871590 ttttgtaatatgctctattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgttt 32871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 35064179 - 35064119
Alignment:
Q  402 tactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||| ||| |||||| |||||||| ||||| ||| |||| |||||||||||||||||    
T  35064179 tactttgactgtatttttta-ctaatatacaaatataaacattatcatgtaagatgttgttt 35064119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Original strand, 35380894 - 35380923
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaa 372  Q
    ||||||||||||||||||||||||||||||    
T  35380894 tacttcctccgtttcaaaatacatgtccaa 35380923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 52227098 - 52227139
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatg 457  Q
    |||||| ||||||||||||||||||| ||||||| |||||||    
T  52227098 tttttatctaatatataaatacaaatgttagcatataagatg 52227139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 7e-53; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 342 - 463
Target Start/End: Complemental strand, 13499598 - 13499477
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  13499598 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 13499499  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  13499498 attagcatgtaagatgttgttt 13499477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 42490458 - 42490338
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  42490458 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 42490359  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  42490358 ttagcatgtaagatgttgttt 42490338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 463
Target Start/End: Complemental strand, 42761746 - 42761625
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  42761746 ttactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 42761647  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  42761646 attagcatgtaagatgttgttt 42761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 27010736 - 27010616
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  27010736 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaata 27010637  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  27010636 ttagcatgtaagatgttgttt 27010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 39866403 - 39866283
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  39866403 tactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 39866304  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  39866303 ttagcatgtaagatgttgttt 39866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 21797562 - 21797676
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||    
T  21797562 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagca 21797661  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  21797662 tgtaagatgttgttt 21797676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 27334986 - 27334873
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  27334986 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 27334887  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  27334886 gtaagatgttgttt 27334873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 20765196 - 20765316
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  20765196 tactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaata 20765295  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||| |||||||||||||||||    
T  20765296 ttaacatgtaagatgttgttt 20765316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 348 - 461
Target Start/End: Complemental strand, 34912399 - 34912286
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||     
T  34912399 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaga 34912300  T
Q  448 atgtaagatgttgt 461  Q
     |||||||||||||    
T  34912299 ttgtaagatgttgt 34912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 54507640 - 54507761
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||   ||||||||||||||| |||||||||| ||    
T  54507640 ttacttcctccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagat 54507739  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  54507740 attagcatgtaagatgttgttt 54507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 21005293 - 21005413
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||  |||||||||| ||||||||||||| |||||    
T  21005293 tactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaata 21005392  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  21005393 ttagcatgtaagatgttgttt 21005413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 33415799 - 33415919
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||| ||||||||||||||||||||||||||||||||||  |||| | |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  33415799 tactccctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaata 33415898  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  33415899 ttagcatgtaagatgttgttt 33415919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 19823899 - 19824014
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||      ||||    
T  19823899 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtat------aaat 19823992  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  19823993 attagcatgtaagatgttgttt 19824014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 354 - 463
Target Start/End: Original strand, 33803532 - 33803642
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtac-tttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||| |||||||| |||||||||| ||||    
T  33803532 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgta 33803631  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  33803632 agatgttgttt 33803642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 43467998 - 43467884
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| || ||||||| | ||||||||||    
T  43467998 ctccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaatattagca 43467899  T
Q  449 tgtaagatgttgttt 463  Q
     ||||||||||||||    
T  43467898 ggtaagatgttgttt 43467884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 6910342 - 6910454
Alignment:
Q  351 ccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatg 450  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||| ||  || |||||||||||| ||||||||||||||||| ||||    
T  6910342 ccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatg 6910441  T
Q  451 taagatgttgttt 463  Q
    |||||||||||||    
T  6910442 taagatgttgttt 6910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 36227545 - 36227665
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| ||||| ||||| |||||||||||||| |||||||||| |||| ||||||||||  || |||| || |||| ||||||||||||||    
T  36227545 tactccctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaata 36227644  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  36227645 ttagcatgtaagatgttgttt 36227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 43181611 - 43181497
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtac-tttttaactaatatataaatacaaatattagca 448  Q
    ||||||| |||||||||||  |||||| | |||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||| ||||||||| |    
T  43181611 tccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagta 43181512  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  43181511 tgtaagatgttgttt 43181497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 384 - 463
Target Start/End: Original strand, 30213845 - 30213924
Alignment:
Q  384 tgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30213845 tgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 30213924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 38137854 - 38137944
Alignment:
Q  373 tttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||| |||||||||| ||||||||| ||||||  || |||||||||||| |||||||||||||||||||||||||||||||||||    
T  38137854 tttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 38137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 44561793 - 44561903
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    |||||||||||||||||   || ||||||||||||||||||||| ||| ||||||||||  |||||||||||||| |||||||||||||| ||  |||||    
T  44561793 cgtttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgt 44561892  T
Q  452 aagatgttgtt 462  Q
    |||||||||||    
T  44561893 aagatgttgtt 44561903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 45613580 - 45613662
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatata 432  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||||||||| ||||    
T  45613580 tccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaatgtata 45613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 25527412 - 25527520
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    ||||||||| |||||||||||  ||||||||||||||   ||||||| ||| |||||| |||  || ||||||||| |||||||||||||||||||| ||    
T  25527412 ctccgtttcgaaatacatgtcgcatttttgcaatgtga--tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaaca 25527509  T
Q  449 tgtaagatgtt 459  Q
    |||||||||||    
T  25527510 tgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 15333058 - 15332948
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||| ||||||||||||  | |||| ||||||||||||||||| |   || |||||||   | |||||||||||||||||||||||||| ||||||||||    
T  15333058 gttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaatgttagcatgta 15332959  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  15332958 agatgttgttt 15332948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 339 - 463
Target Start/End: Complemental strand, 48334786 - 48334663
Alignment:
Q  339 tatttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaataca 438  Q
    |||||||| ||||||||| ||||||||| ||  | |||| |||||| || ||||||| |  |||||||| ||  |  |||||||||| ||||||||||||    
T  48334786 tatttactccctccgttttaaaatacatctcgtaattttacaatgtacattattcacatagtttactttaaccattttttttaacta-tatataaataca 48334688  T
Q  439 aatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||    
T  48334687 aatattagcatgtaagatgttgttt 48334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 22786633 - 22786748
Alignment:
Q  346 ttcctccgtttcaaaatacatgtc-caatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatatt 444  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||||||||| |   ||||||||||  || ||||||||||||||||||  |||||| ||    
T  22786633 ttcctccgtttcaaactacatgtcgcaattttt-taatgtgcactattcacatagcttactttgactctattttttaactaatatataa--acaaatgtt 22786729  T
Q  445 agcatgtaagatgttgttt 463  Q
     ||||||||||||||||||    
T  22786730 tgcatgtaagatgttgttt 22786748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 22782269 - 22782384
Alignment:
Q  346 ttcctccgtttcaaaatacatgtc-caatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatatt 444  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||||||||| |   ||||||||||  || ||||||||||| ||||||  |||||| ||    
T  22782269 ttcctccgtttcaaactacatgtcgcaattttt-taatgtgcactattcacatagcttactttgactctattttttaactaaaatataa--acaaatgtt 22782365  T
Q  445 agcatgtaagatgttgttt 463  Q
     ||||||||||||||||||    
T  22782366 tgcatgtaagatgttgttt 22782384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 37766058 - 37766168
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttact-----ttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||| |||  || |||||||||||||||||| || |||||||||     ||||| ||||||||||||||| |||| ||||||| |||||||     
T  37766058 tttcaaaatacacgtctcatatttgcaatgtgcactattaacatgatttactataatttgactgtactttttaactaacatatgaatacaagtattagcc 37766157  T
Q  449 tgtaagatgtt 459  Q
    | |||||||||    
T  37766158 tctaagatgtt 37766168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 353 - 459
Target Start/End: Complemental strand, 41253015 - 41252909
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    ||||||||||| |||||  | |||| ||||||||||||||||  |   ||||||| ||  || |||||||||||||||||||||||||| ||||||| ||    
T  41253015 gtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgttagcatata 41252916  T
Q  453 agatgtt 459  Q
    |||||||    
T  41252915 agatgtt 41252909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 32220870 - 32220930
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgac 410  Q
    ||||||| |||||||||||  ||||||||||||||| ||||||||||||| ||||||||||    
T  32220870 tccgttttaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgac 32220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 23940618 - 23940508
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||| ||||||||||||  | |||| ||| ||| ||| ||||  | |||||| |||||  || ||||||||||||||||||||| |||| ||| ||    
T  23940618 ctccgttttaaaatacatgtcgcaattttacaacgtgtacttttcatataatttacattgaccttattttttaactaatatataaataaaaatgttaaca 23940519  T
Q  449 tgtaagatgtt 459  Q
    |||||||||||    
T  23940518 tgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 463
Target Start/End: Original strand, 52167279 - 52167329
Alignment:
Q  413 tactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  52167279 tactttttaattaatatataaatacaaatattaatatgtaagatgttgttt 52167329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 3430505 - 3430420
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||| |||||||||||||| |  | | ||||||||||  || |||||||||||||||| |||| |||||||||||||||| |||||    
T  3430505 ttttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaatgtt 3430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 44856416 - 44856465
Alignment:
Q  413 tactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  44856416 tactttttaactaacatataaatacaaatgttagtatgtaagatgttgtt 44856465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 17643787 - 17643851
Alignment:
Q  399 atttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||| ||||  || |||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  17643787 atttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgttt 17643851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 41751599 - 41751552
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||    
T  41751599 tttttaactaatatataaatacaaatgttagcatttacgatgttgttt 41751552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 42469727 - 42469610
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||| ||||||||||||  |||||| ||||| ||| ||||||| ||| ||| ||| || ||| ||||||| |||||| ||||||||||      
T  42469727 tacttcatccgttt-aaaatacatgtcgcattttttcaatgcgcattattcacgtgacttaatttaaccgtattttttaattaatatgtaaatacaaa-c 42469630  T
Q  443 ttagcatgtaagatgttgtt 462  Q
    ||| ||| ||||||||||||    
T  42469629 ttaacatataagatgttgtt 42469610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 23224363 - 23224306
Alignment:
Q  399 atttactttgacagtacttttt-aactaatatataaatacaaatattagcatgtaaga 455  Q
    ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||    
T  23224363 atttactttgactatacttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 33128111 - 33128063
Alignment:
Q  413 tactttttaactaatatataaatacaaatattagcatgtaagatgttgt 461  Q
    |||||||||||||||| ||||||| |||||||| |||||||||| ||||    
T  33128111 tactttttaactaatacataaatataaatattaacatgtaagatattgt 33128063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 48489430 - 48489529
Alignment:
Q  115 acatagaagaaatgacaaagtcatcataaatt--cgcacataaagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgaca 212  Q
    |||||||||||||||||||||||||||||| |  | |||||| |||||||||  ||| ||| ||| ||| ||||||| ||  ||| ||||||||| ||||    
T  48489430 acatagaagaaatgacaaagtcatcataaactcacacacatagagtggaggtgttgaagtttgaaccccaatcaaaaagtcgggcttaacaatttcgaca 48489529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 15568124 - 15568077
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| ||| | |||||||| ||||||    
T  15568124 tttttaactaatatataaatacaaatgttaccgtgtaagatattgttt 15568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 27813511 - 27813445
Alignment:
Q  382 tgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||| |   ||| ||||||  || |||||||||||||||||||||||||| ||||||    
T  27813511 tgtgcactattcacatagcttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 36881278 - 36881310
Alignment:
Q  339 tatttacttcctccgtttcaaaatacatgtcca 371  Q
    |||||||| ||||||||||||||||||||||||    
T  36881278 tatttactccctccgtttcaaaatacatgtcca 36881310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 47164642 - 47164598
Alignment:
Q  416 tttttaactaatatataaa-tacaaatattagcatgtaagatgtt 459  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||    
T  47164642 tttttaactaatatataaaatacaaatgttagtatgtaagatgtt 47164598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 978077 - 978197
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 978176  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  978177 ttagcatgtaagatgttgttt 978197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 8086292 - 8086172
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  8086292 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaata 8086193  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||| |||||||||||||||||    
T  8086192 ttaacatgtaagatgttgttt 8086172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 14634415 - 14634299
Alignment:
Q  347 tcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattag 446  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  14634415 tcctccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattag 14634316  T
Q  447 catgtaagatgttgttt 463  Q
    |||||||||||||||||    
T  14634315 catgtaagatgttgttt 14634299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 33387220 - 33387340
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  33387220 tactccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaata 33387319  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  33387320 ttagcatgtaagatgttgttt 33387340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 352 - 463
Target Start/End: Complemental strand, 30355127 - 30355016
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||    
T  30355127 cgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgt 30355028  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  30355027 aagatgttgttt 30355016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 9502889 - 9502769
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||||||||  |||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  9502889 tactccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 9502790  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  9502789 ttagcatgtaagatgttgttt 9502769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 337 - 463
Target Start/End: Complemental strand, 18094349 - 18094223
Alignment:
Q  337 gttatttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaata 436  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||| |   ||||||||||||||| ||||||||    
T  18094349 gttatatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaata 18094250  T
Q  437 caaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||||    
T  18094249 caaatattagcatgtaagatgttgttt 18094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 40156198 - 40156318
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||  || ||||||| |||| ||||||||||||||    
T  40156198 tactccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaata 40156297  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  40156298 ttagcatgtaagatgttgttt 40156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 352 - 463
Target Start/End: Complemental strand, 3472530 - 3472419
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||  || ||||||||||||  ||||||||||||||||||||||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  3472430 aagatgttgttt 3472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 33587721 - 33587611
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  || |||||||||||| ||||||||||||||||| ||||||    
T  33587721 gtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgta 33587622  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  33587621 agatgttgttt 33587611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 34111955 - 34112075
Alignment:
Q  336 tgttatttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaat 435  Q
    |||||| ||||  ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||  || ||||| |||||| |||||||    
T  34111955 tgttatatactctctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaat 34112054  T
Q  436 acaaatattagcatgtaagat 456  Q
    |||||||||| ||||||||||    
T  34112055 acaaatattatcatgtaagat 34112075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 346 - 459
Target Start/End: Original strand, 11251117 - 11251230
Alignment:
Q  346 ttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatatta 445  Q
    |||||| | ||||||||| ||||| || |||||||||||||||||||||||||| ||| ||||||  ||||||||||||||| |||||||||||||||||    
T  11251117 ttcctctggttcaaaatatatgtctaacttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatatta 11251216  T
Q  446 gcatgtaagatgtt 459  Q
    ||||||| ||||||    
T  11251217 gcatgtacgatgtt 11251230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 11785977 - 11785867
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatac-aaatattagcatgta 452  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||||||||   ||||||||||||||| ||||||||| |||||||| ||||||    
T  11785977 tttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgta 11785878  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  11785877 agatgttgttt 11785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 342 - 463
Target Start/End: Complemental strand, 24992401 - 24992280
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| ||||||||||||||||||||||  | |||| ||||||||||||||||| |   ||||||||||  || |||||||||||| |||||||||||||    
T  24992401 ttactccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaat 24992302  T
Q  442 attagcatgtaagatgttgttt 463  Q
    |||||||| |||||||||||||    
T  24992301 attagcatataagatgttgttt 24992280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 343 - 459
Target Start/End: Complemental strand, 38916512 - 38916396
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||  ||||||||| | |||||||||||| ||| || |||||||  |||||||||||||| ||||||||||||||     
T  38916512 tactccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaatg 38916413  T
Q  443 ttagcatgtaagatgtt 459  Q
    ||||||||| |||||||    
T  38916412 ttagcatgtgagatgtt 38916396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 353 - 463
Target Start/End: Original strand, 7224175 - 7224285
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||| ||||||||||| || ||||||||||||| |||||| | |||| ||||||||||  |||||| |||||||| ||||||||||||||||||||||||    
T  7224175 gttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgta 7224274  T
Q  453 agatgttgttt 463  Q
    | |||||||||    
T  7224275 aaatgttgttt 7224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 39776641 - 39776746
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||| ||  ||||||||||||| |||||||||| | | ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  39776641 tttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattagcatgtaa 39776740  T
Q  454 gatgtt 459  Q
     |||||    
T  39776741 aatgtt 39776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 341 - 463
Target Start/End: Complemental strand, 9050829 - 9050718
Alignment:
Q  341 tttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaa 440  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||           ||||||||| ||||||||||||    
T  9050829 tttactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttaacttacttt-----------ttaactaatgtataaatacaaa 9050741  T
Q  441 tattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||    
T  9050740 tattagcatgtaagatgttgttt 9050718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 12007894 - 12007774
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||  ||||||  | ||||||||||| || ||| ||| ||||||  |||||||||| ||||||||||||||||||     
T  12007894 tactccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatg 12007795  T
Q  443 ttagcatgtaagatgttgttt 463  Q
     |||||||||| |||||||||    
T  12007794 ctagcatgtaaaatgttgttt 12007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 24916503 - 24916388
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagta--ctttttaactaatatataaatacaaatattagc 447  Q
    ||||||||||||||||||||  | |||| ||||||| ||||||||| |   ||||||||||  ||   |||||||||||| |||||||||||||||||||    
T  24916503 tccgtttcaaaatacatgtcacaattttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaatattagc 24916404  T
Q  448 atgtaagatgttgttt 463  Q
    || |||||||||||||    
T  24916403 atataagatgttgttt 24916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 32400400 - 32400447
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 32400447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 11761125 - 11761186
Alignment:
Q  402 tactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgttt 11761186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 354 - 463
Target Start/End: Original strand, 27109700 - 27109808
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||| || |  ||||||| |||| || | |||||| |||| ||||||||| | |||||||||| |||| || ||||||||||||||||||||||    
T  27109700 tttcaaaatatatatttaatttttacaatatgtattattcatttgacttactttgata-tactttttaattaatgtaaaaatacaaatattagcatgtaa 27109798  T
Q  454 gatgttgttt 463  Q
    ||||||||||    
T  27109799 gatgttgttt 27109808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 460
Target Start/End: Original strand, 32017218 - 32017330
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||||||| |||||||||| |  | ||||   ||||||| ||||||| | | |||||||||   || |||||||||||||||||||||||||| |||||    
T  32017218 cctccgttttaaaatacatgacgcaattttatgatgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttagc 32017317  T
Q  448 atgtaagatgttg 460  Q
    |||||||||||||    
T  32017318 atgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 456
Target Start/End: Complemental strand, 27579681 - 27579579
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||||  |||||||  ||||| | |||||| | || ||||||| ||  || |||||||||||||||||||||||||| ||||||||||    
T  27579681 gtttcaaaatacatgtcacatttttgtgatgtgtattattcaat-gacttactttaactatattttttaactaatatataaatacaaatgttagcatgta 27579583  T
Q  453 agat 456  Q
    ||||    
T  27579582 agat 27579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 460
Target Start/End: Complemental strand, 3422399 - 3422355
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttg 460  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  3422399 tttttaactaatatataaatacaaatgttagcatgtaagatgttg 3422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 18998760 - 18998807
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18998760 tttttaactaatatataaatacaaatgttagtatgtaagatgttgttt 18998807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 455
Target Start/End: Complemental strand, 20692641 - 20692541
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||| |||||||| |||  |||||||||||||||| ||| |||||||  || ||||||  ||||||||||| |  |||||||||||||||||| ||||||    
T  20692641 gttttaaaatacacgtcacatttttgcaatgtgcattatccacttgacgtattttgaccatactttttaacca--atataaatacaaatattaacatgta 20692544  T
Q  453 aga 455  Q
    |||    
T  20692543 aga 20692541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 12447626 - 12447560
Alignment:
Q  395 cttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||| ||||||||||  ||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  12447626 cttgacttactttgaccatactttttaactaatgtttaaataca--tattagcatgtaagatgttgttt 12447560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 463
Target Start/End: Complemental strand, 12456871 - 12456782
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||| |||||||||||||| || | | ||||||| |   || ||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  12456871 ttttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgttt 12456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 12360010 - 12359963
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  12360010 tttttaactaatatataaatacaaatgttagcatgaaagatattgttt 12359963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 12448329 - 12448278
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttga 399  Q
    |||||||||||||||||||||| |||||||| |||  |||||||||||||||    
T  12448329 cctccgtttcaaaatacatgtctaatttttgtaatacgcactattcacttga 12448278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 18598554 - 18598620
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttt 419  Q
    |||||||||||||||||  |||||||||||||||| |||| || ||| ||||||||||  |||||||    
T  18598554 gtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 17476950 - 17476993
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||||||||||||||||||| |||| || |||||||||    
T  17476950 tttttaactaatatataaatacaaatgttagtatataagatgtt 17476993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 26387068 - 26387021
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||| ||||||||| |||| ||||||| |||||||||||||    
T  26387068 tttttaactaacatataaatataaatgttagcatttaagatgttgttt 26387021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 462
Target Start/End: Complemental strand, 31197911 - 31197833
Alignment:
Q  384 tgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||||| || | | ||||||||||| || ||||||||||| |||||||||||||| |||  |||||| ||| ||||    
T  31197911 tgcactattgacctaacttactttgacaataatttttaactaaaatataaatacaaatgttaatatgtaaaatgctgtt 31197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 1277562 - 1277497
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacata-aagtggaggtactgacgttcgaatccc 181  Q
    ||||| |||||||||||||||| ||||| || |||| | |||||||||||| || |||||||||||    
T  1277562 atagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccgaggttcgaatccc 1277497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 37495683 - 37495712
Alignment:
Q  416 tttttaactaatatataaatacaaatatta 445  Q
    ||||||||||||||||||||||||||||||    
T  37495683 tttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 13812120 - 13812156
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||| |||||||||||||| |||||    
T  13812120 tttttaactaatatatcaatacaaatattagtatgta 13812156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 8042284 - 8042164
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8042185  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  8042184 ttagcatgtaagatgttgttt 8042164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 19141328 - 19141208
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  19141328 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 19141229  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  19141228 ttagcatgtaagatgttgttt 19141208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 5405001 - 5405116
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  5405001 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 5405100  T
Q  448 atgtaagatgttgttt 463  Q
    ||||||||||||||||    
T  5405101 atgtaagatgttgttt 5405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 7608056 - 7608169
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  7608056 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 7608155  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  7608156 gtaagatgttgttt 7608169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 39358146 - 39358262
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  39358146 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 39358245  T
Q  443 ttagcatgtaagatgtt 459  Q
    |||||||||||||||||    
T  39358246 ttagcatgtaagatgtt 39358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 44365163 - 44365277
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  44365163 ctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 44365262  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  44365263 tgtaagatgttgttt 44365277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 343 - 459
Target Start/End: Complemental strand, 2183219 - 2183103
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||| ||||||||||    
T  2183219 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaata 2183120  T
Q  443 ttagcatgtaagatgtt 459  Q
    |||||||||||||||||    
T  2183119 ttagcatgtaagatgtt 2183103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 6223073 - 6223186
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||||    
T  6223073 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcat 6223172  T
Q  450 gtaagatgttgttt 463  Q
    |||||||| |||||    
T  6223173 gtaagatgatgttt 6223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 357 - 463
Target Start/End: Complemental strand, 11841841 - 11841735
Alignment:
Q  357 caaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagat 456  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 11841742  T
Q  457 gttgttt 463  Q
    |||||||    
T  11841741 gttgttt 11841735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 7799847 - 7799967
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||     
T  7799847 tactccctacgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatg 7799946  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  7799947 ttagcatgtaagatgttgttt 7799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 19262680 - 19262793
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| | || | ||||||||||  || |||||||||||||||||||||||||||    
T  19262680 tacttcctccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaata 19262779  T
Q  443 ttagcatgtaagat 456  Q
    ||||||||||||||    
T  19262780 ttagcatgtaagat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 32774597 - 32774711
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||| |||||| ||||||||||  |||||||||||||||||||| ||| ||||||||  |    
T  32774597 ctccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaatattaata 32774696  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  32774697 tgtaagatgttgttt 32774711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 36072185 - 36072290
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||   || |||||||||||| |||||||| ||||||||||||||||    
T  36072185 tttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaa 36072284  T
Q  454 gatgtt 459  Q
    ||||||    
T  36072285 gatgtt 36072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 354 - 463
Target Start/End: Original strand, 33607387 - 33607492
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||   ||||||||||||||| |||||||||||||||    ||||||    
T  33607387 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat----atgtaa 33607482  T
Q  454 gatgttgttt 463  Q
    ||||||||||    
T  33607483 gatgttgttt 33607492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 456
Target Start/End: Complemental strand, 43444791 - 43444689
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  | |||| ||||||||| ||||||| | |||| |||||||  || |||||||||||||||||||||||||| |||||||||||    
T  43444791 tttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 43444692  T
Q  454 gat 456  Q
    |||    
T  43444691 gat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 36719573 - 36719466
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||||||| ||||||||||  ||||||||||      |||||||||||||||||||||    
T  36719573 tccgtttcaaa-tacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaa-----gtataaatacaaatattagcat 36719480  T
Q  450 gtaagatgttgttt 463  Q
     |||||||||||||    
T  36719479 ttaagatgttgttt 36719466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 378 - 463
Target Start/End: Original strand, 44644905 - 44644990
Alignment:
Q  378 gcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||| |||  ||||||||||  |||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgttt 44644990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 463
Target Start/End: Original strand, 11931701 - 11931811
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||||  | |||| |||| |||| ||||||  | | ||||||||||  || |||||||||||||||||||||||||| ||||||| ||    
T  11931701 gtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcattta 11931800  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  11931801 agatgttgttt 11931811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 462
Target Start/End: Original strand, 16865069 - 16865173
Alignment:
Q  358 aaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatg 457  Q
    ||||||||||||  |||||| |||| | || ||||||  ||| ||||||||||  |||||||||||||| |||||||||||||| |||||||||||| ||    
T  16865069 aaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaagttg 16865168  T
Q  458 ttgtt 462  Q
    |||||    
T  16865169 ttgtt 16865173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 24093799 - 24093679
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaattttt-gcaatgtgcactattcacttgatttactttgacagtacttttt-aactaatatataaatacaaa 440  Q
    |||||| ||| ||||||||||||||||  |||||| || |||||| ||||||   ||||||||||||||  |||||||| |||||| |||||| ||||||    
T  24093799 tacttcatccatttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatataa-tacaaa 24093701  T
Q  441 tattagcatgtaagatgttgtt 462  Q
    | ||||||||||||||||||||    
T  24093700 tgttagcatgtaagatgttgtt 24093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 42133763 - 42133868
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  | ||||  |||||||||||||||  |  ||||||||||   || |||||||||||||||||||||||||| |||||||| ||    
T  42133763 tttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaatgttagcatgaaa 42133862  T
Q  454 gatgtt 459  Q
    ||||||    
T  42133863 gatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 22839157 - 22839069
Alignment:
Q  375 tttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||| | | ||||||||||  || |||||||||| |||||||||  |||| ||||||| |||||||||||||    
T  22839157 tttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgttt 22839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 24251960 - 24252079
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||||||||||||| ||  | |||| |||| || | ||||||| | | ||| ||||||  || ||||||||||||||||||||||||||     
T  24251960 tacttcatccgtttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatg 24252059  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||||||||||| |||||||||    
T  24252060 ttagcatgtaa-atgttgttt 24252079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 388 - 463
Target Start/End: Complemental strand, 13125362 - 13125287
Alignment:
Q  388 ctattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||| ||||||| ||  || |||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  13125362 ctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgttt 13125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 9172350 - 9172288
Alignment:
Q  401 ttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||  || |||||||||||| ||||||||||||  |||||||||||||||||||||    
T  9172350 ttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgttt 9172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 36177809 - 36177723
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagtacttttt-aactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||| ||| ||||||| ||||||| ||||||  || ||||| |||||||||||||||| |||||||| ||| |||||||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 38292010 - 38292072
Alignment:
Q  401 ttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||  || |||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  38292010 ttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgttt 38292072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 38839146 - 38839191
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgt 461  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  38839146 tttttaactaatatataaatacaaatgttagcatataagatgttgt 38839191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 450
Target Start/End: Complemental strand, 9007035 - 9006939
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatg 450  Q
    ||||||||||||||||  | |||| ||||||||| ||||||  |   ||||||||||  || |||||||||||| ||||||||||||| ||||||||    
T  9007035 tttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 31610842 - 31610795
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||    
T  31610842 tttttaactaatatataaatacaaatgttagaatgtaagacgttgttt 31610795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 9553978 - 9553864
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||||||  ||||||||||||||||  |||||| |||||| || |||  |    | |||||||||| | | |||||||||||||||||||| ||||||    
T  9553978 tacttcctcaatttcaaaatacatgtcgcatttttacaatgtacattatata----acttactttgaccgcattttttaactaatatataaat-caaata 9553884  T
Q  443 ttagcatgtaagatgttgtt 462  Q
    ||| ||||||| ||||||||    
T  9553883 ttaacatgtaaaatgttgtt 9553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 10202294 - 10202224
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacata-aagtggaggtactgacgttcgaatcccgatca 186  Q
    ||||| |||||||||||| ||| ||||| || |||||| ||||||||||||||| ||||||| ||||||||    
T  10202294 atagacgaaatgacaaagccattataaactcacacatataagtggaggtactgaagttcgaaccccgatca 10202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 13598442 - 13598523
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaacta 425  Q
    |||||||||||||| |||||| ||||   |||||| ||||||||||||||||  ||| ||||||||||  |||||||||||||    
T  13598442 tacttcctccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 13117528 - 13117467
Alignment:
Q  401 ttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||||||  || ||||||||| ||||||||||| ||||||||| || ||||||||||||    
T  13117528 ttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgtt 13117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 19166037 - 19165925
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| |||||| |||||   ||||||||||||||| ||||||| ||| ||  |||||   |  ||||||| |||||||||||||||| | ||| |||    
T  19166037 tccgttttaaaatatatgtcgcgtttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcat 19165939  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  19165938 gtaagatgttgttt 19165925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 4835728 - 4835772
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttg 460  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  4835728 tttttaactaatatataaatacaaatgttaacatataagatgttg 4835772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 3837325 - 3837271
Alignment:
Q  399 atttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||| ||| || ||| ||||||||||||||||||||| |||||| |||||||||    
T  3837325 atttattttaaccgtattttttaactaatatataaatataaatatcagcatgtaa 3837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 31904069 - 31904027
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgt 458  Q
    ||||||||||||||||||||| |||||||| || |||||||||    
T  31904069 tttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 3013884 - 3013839
Alignment:
Q  417 ttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    |||||||||||||||||||||||||  ||||||| ||| |||||||    
T  3013884 ttttaactaatatataaatacaaatgctagcatgcaagttgttgtt 3013839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 34248559 - 34248591
Alignment:
Q  427 tatataaatacaaatattagcatgtaagatgtt 459  Q
    ||||||||||||||| |||||||||||||||||    
T  34248559 tatataaatacaaatgttagcatgtaagatgtt 34248591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 7e-50; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 19088220 - 19088100
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  19088220 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaata 19088121  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  19088120 ttagcatgtaagatgttgttt 19088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 24624203 - 24624083
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  24624203 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 24624104  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  24624103 ttagcatgtaagatgttgttt 24624083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 32414941 - 32414821
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  32414941 tactccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 32414842  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  32414841 ttagcatgtaagatgttgttt 32414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 4147931 - 4148051
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  4147931 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 4148030  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  4148031 ttagcatgtaagatgttgttt 4148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 6563226 - 6563346
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  6563226 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaata 6563325  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  6563326 ttagcatgtaagatgttgttt 6563346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 22054778 - 22054892
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  22054778 ctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 22054877  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  22054878 tgtaagatgttgttt 22054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 18668950 - 18668830
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  || |||||||||||| ||||||||||||||    
T  18668950 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaata 18668851  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  18668850 ttagcatgtaagatgttgttt 18668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 15383192 - 15383072
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| ||  ||||||||||||||| ||||||||||||||    
T  15383192 tacttcgtccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaata 15383093  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  15383092 ttagcatgtaagatgttgttt 15383072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 17214046 - 17213926
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  17214046 tactccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaata 17213947  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  17213946 ttagcatgtaagatgttgttt 17213926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 32671816 - 32671936
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  || |||||||||||| ||||||||||||||    
T  32671816 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaata 32671915  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||||| |||||||||||||||    
T  32671916 ttagcgtgtaagatgttgttt 32671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 17257903 - 17257793
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| || |||||||||||||||||||||    
T  17257903 gtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgta 17257804  T
Q  453 agatgttgttt 463  Q
    |||||||||||    
T  17257803 agatgttgttt 17257793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 20226550 - 20226440
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  20226550 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 20226451  T
Q  453 agatgttgttt 463  Q
    ||| |||||||    
T  20226450 agacgttgttt 20226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 22120534 - 22120424
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  22120534 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 22120435  T
Q  453 agatgttgttt 463  Q
    ||| |||||||    
T  22120434 agacgttgttt 22120424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 3989518 - 3989406
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| | ||||||||| |||||||||    
T  3989518 tccgttacaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcat 3989420  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  3989419 gtaagatgttgttt 3989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 342 - 463
Target Start/End: Complemental strand, 25476071 - 25475955
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| ||||||||         
T  25476071 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata----- 25475977  T
Q  442 attagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||    
T  25475976 attagcatgtaagatgttgttt 25475955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 1040854 - 1040944
Alignment:
Q  373 tttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 1040944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 31569280 - 31569175
Alignment:
Q  351 ccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatg 450  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||| | |||| |||||||||||||||||| |||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  451 taagat 456  Q
    ||||||    
T  31569180 taagat 31569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 354 - 463
Target Start/End: Original strand, 28477764 - 28477873
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  | |||||||||||| ||||||||| ||| || |||||||  || ||||||||||||||||||||||||||||||||||||||    
T  28477764 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaa 28477863  T
Q  454 gatgttgttt 463  Q
    | ||||||||    
T  28477864 gttgttgttt 28477873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 20437269 - 20437155
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttga-cagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||    |||||||||||| ||||||||||||||| | ||    
T  20437269 tccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaaca 20437170  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  20437169 tgtaagatgttgttt 20437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 353 - 463
Target Start/End: Original strand, 29790216 - 29790326
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||||||||||||||||  | |||||||||||  ||||||||| ||| |||||| |||  || |||||||||||||||||||||||||||||||||||||    
T  29790216 gtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatattagcatgta 29790315  T
Q  453 agatgttgttt 463  Q
    || ||||||||    
T  29790316 agttgttgttt 29790326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 354 - 460
Target Start/End: Original strand, 29693894 - 29694000
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  | |||||||||||| ||||||||| ||| || |||||||  || ||||||||||||||||||||||||||| ||||||||||    
T  29693894 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaa 29693993  T
Q  454 gatgttg 460  Q
    | |||||    
T  29693994 gttgttg 29694000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 10520475 - 10520588
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||| |||||||||||||||| | |||||| |||| ||||||||||  ||| | ||||||||| |||||||||| ||||||  ||    
T  10520475 tccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagatattaatat 10520574  T
Q  450 gtaagatgttgttt 463  Q
    |||| |||||||||    
T  10520575 gtaaaatgttgttt 10520588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 15337488 - 15337608
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| || |||||||||||||| ||  | |||| |||| |||| ||||||| | | ||||||||||  || |||||||||||||||||||||||||||    
T  15337488 tacttcatctgtttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaata 15337587  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||||||||||| |||||||||    
T  15337588 ttagcatgtaaaatgttgttt 15337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 31869714 - 31869824
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||||||    |||| |||||| |||||||| | | ||||||||||||  |  |||||||||||||||||||||||||| ||||||    
T  31869714 ctccgtttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagca 31869813  T
Q  449 tgtaagatgtt 459  Q
    |||||||||||    
T  31869814 tgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 462
Target Start/End: Original strand, 4440856 - 4440969
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    ||||||||||||||| ||||   ||||||| |||||||||||||||  | | ||||||||||  |||||||||  ||| |||||||||||||| ||||||    
T  4440856 ctccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagca 4440955  T
Q  449 tgtaagatgttgtt 462  Q
    ||||||||||||||    
T  4440956 tgtaagatgttgtt 4440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 354 - 459
Target Start/End: Complemental strand, 21540880 - 21540775
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||||||||  ||||||| |||||||||||||||| |||| ||||||||||  ||||||| ||||| | |||||||||||||||||  ||||||    
T  21540880 tttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaa 21540781  T
Q  454 gatgtt 459  Q
     |||||    
T  21540780 aatgtt 21540775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 371 - 463
Target Start/End: Complemental strand, 24955630 - 24955538
Alignment:
Q  371 aatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||| |||||||| ||||||||||| ||| |||||   || ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  24955630 aatttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgttt 24955538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 17155158 - 17155268
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||||||||||   |||||  ||||| |||||||||| |||  ||||||||   |||||  ||||||| |||||||||||||| |||||||||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  452 aagatgttgtt 462  Q
    |||||||||||    
T  17155258 aagatgttgtt 17155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 354 - 463
Target Start/End: Original strand, 12225986 - 12226095
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||| || |||||||   ||| || ||||||||| || ||| |||||   ||||||||||||||| |||||||| ||||||||||||||||    
T  12225986 tttcaaaatacatatctaatttttatgatgcgcgctattcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaa 12226085  T
Q  454 gatgttgttt 463  Q
    ||| ||||||    
T  12226086 gatattgttt 12226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 2360046 - 2360110
Alignment:
Q  399 atttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||  || ||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  2360046 atttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgttt 2360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 3623899 - 3623856
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  3623899 tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 5495322 - 5495369
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  5495322 tttttaactaatatataaatacaaatgttagcatgtaagattttgttt 5495369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 23158098 - 23158051
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23158098 tttttaactaatatataaatacaaatgttaacatgtaagatgttgttt 23158051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 374 - 456
Target Start/End: Complemental strand, 19240823 - 19240741
Alignment:
Q  374 ttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagat 456  Q
    |||||||||||  ||||||||| | | ||| ||||||  || ||||||||||||||||||||||||||||| ||| |||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaagat 19240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 16193100 - 16193052
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 391  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  16193100 tactccctccattttaaaatacatgtccaatttttgcaatgtgcactat 16193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 8101673 - 8101716
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  8101673 tttttaactaatatataaatacaaatgttaacatgtaagatgtt 8101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 459
Target Start/End: Complemental strand, 10298798 - 10298719
Alignment:
Q  380 aatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgtt 459  Q
    |||||||||||||||| |   ||| ||||||  || ||||| |||||||||||||||||||| ||||||||||| |||||    
T  10298798 aatgtgcactattcacatagcttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgtt 10298719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 1260490 - 1260548
Alignment:
Q  403 actttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgt 461  Q
    ||||||||  || |||||||||||||||||||||||| | |||||| ||||||| ||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaagattttgt 1260548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 377
Target Start/End: Complemental strand, 32420782 - 32420748
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaattttt 377  Q
    |||| ||||||||||||||||||||||||||||||    
T  32420782 tactccctccgtttcaaaatacatgtccaattttt 32420748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 14214166 - 14214065
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||| ||||||||||||  | ||||  |||||||| ||||||   || ||  |||||| ||| |||||||| |||||||||||| |||| |||||||||    
T  14214166 cgttttaaaatacatgtcgcaattttataatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgt 14214067  T
Q  452 aa 453  Q
    ||    
T  14214066 aa 14214065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 463
Target Start/End: Complemental strand, 16193053 - 16193024
Alignment:
Q  434 atacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgttt 16193024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 2747618 - 2747578
Alignment:
Q  172 ttcgaatcccgatcaaaatgtttggcctaacaattttgaca 212  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  2747618 ttcgaatcccgatcatgacgtttggcctaacaattttgaca 2747578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 7e-50; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 6402672 - 6402552
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||    
T  6402672 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaata 6402573  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  6402572 ttagcatgtaagatgttgttt 6402552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 11641329 - 11641209
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  11641329 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 11641230  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  11641229 ttagcatgtaagatgttgttt 11641209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 40772034 - 40771914
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  40772034 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 40771935  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  40771934 ttagcatgtaagatgttgttt 40771914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 340 - 463
Target Start/End: Complemental strand, 16120705 - 16120582
Alignment:
Q  340 atttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaa 439  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  16120705 atttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaa 16120606  T
Q  440 atattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||||||||    
T  16120605 atattagcatgtaagatgttgttt 16120582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 36757737 - 36757628
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  36757737 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 36757638  T
Q  454 gatgttgttt 463  Q
    ||||||||||    
T  36757637 gatgttgttt 36757628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 6766372 - 6766488
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  6766372 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 6766471  T
Q  443 ttagcatgtaagatgtt 459  Q
    |||||||||||||||||    
T  6766472 ttagcatgtaagatgtt 6766488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 17305954 - 17306074
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||||    
T  17305954 tactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaata 17306053  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  17306054 ttagcatgtaagatgttgttt 17306074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 30003540 - 30003653
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  30003540 tccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 30003639  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  30003640 gtaagatgttgttt 30003653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 30701718 - 30701838
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||    
T  30701718 tactccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaata 30701817  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||||| |||||||||||||||    
T  30701818 ttagcgtgtaagatgttgttt 30701838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 348 - 459
Target Start/End: Original strand, 27292645 - 27292756
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||    
T  27292645 cctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaatattagc 27292744  T
Q  448 atgtaagatgtt 459  Q
    ||||||||||||    
T  27292745 atgtaagatgtt 27292756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 40977745 - 40977630
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||||| |||||||||||||||||||    
T  40977745 cctccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagc 40977646  T
Q  448 atgtaagatgttgttt 463  Q
    ||||||||||||||||    
T  40977645 atgtaagatgttgttt 40977630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 341 - 463
Target Start/End: Original strand, 36399096 - 36399218
Alignment:
Q  341 tttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaa 440  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  || |||||||||||| ||||||||||||    
T  36399096 tttactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaa 36399195  T
Q  441 tattagcatgtaagatgttgttt 463  Q
    ||||||| |||||||||||||||    
T  36399196 tattagcgtgtaagatgttgttt 36399218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 42788804 - 42788684
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  42788804 tactccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 42788705  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    || ||||||||||||||||||    
T  42788704 tttgcatgtaagatgttgttt 42788684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 52024026 - 52024146
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||  || |||||||||||| |||||||| |||||    
T  52024026 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaata 52024125  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||||| |||||||||||||||    
T  52024126 ttagcgtgtaagatgttgttt 52024146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 24321259 - 24321381
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgac--agtactttttaactaatatataaatacaaa 440  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    || |||||||||||| ||||||||||||    
T  24321259 tactccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaa 24321358  T
Q  441 tattagcatgtaagatgttgttt 463  Q
    |||||||||||||||| ||||||    
T  24321359 tattagcatgtaagatattgttt 24321381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 42735423 - 42735307
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtac---tttttaactaatatataaatacaaatattag 446  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||  |||   |||||||||||||||||||||||||||||||    
T  42735423 tccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattag 42735324  T
Q  447 catgtaagatgttgttt 463  Q
    ||||||||||| |||||    
T  42735323 catgtaagatgatgttt 42735307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 9342900 - 9342787
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||| ||||||| ||||||||||||||||  ||||||||||| |||||||||   || |||||||||||| |||||||||||||||||||||    
T  9342900 tccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcat 9342801  T
Q  450 gtaagatgttgttt 463  Q
    ||||||||||||||    
T  9342800 gtaagatgttgttt 9342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 356 - 463
Target Start/End: Complemental strand, 15912585 - 15912478
Alignment:
Q  356 tcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaaga 455  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||| | | || | |||||||||||||||||||||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaaga 15912486  T
Q  456 tgttgttt 463  Q
    ||||||||    
T  15912485 tgttgttt 15912478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 26910081 - 26910196
Alignment:
Q  348 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagc 447  Q
    ||||| ||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||| |    
T  26910081 cctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaac 26910180  T
Q  448 atgtaagatgttgttt 463  Q
    ||| |||||| |||||    
T  26910181 atgcaagatgatgttt 26910196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 4302124 - 4302234
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||| | ||||||||| ||||||||||||||| ||||||| |||||| ||||||||| | |  |||||||||||| |||||||| |||||||||||    
T  4302124 ctccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagca 4302223  T
Q  449 tgtaagatgtt 459  Q
    |||||||||||    
T  4302224 tgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 352 - 462
Target Start/End: Complemental strand, 28030934 - 28030824
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    |||||||||||||||||   |||||||||||||||| |||| || ||| ||| ||||||  |||||||||||||| |||||||||||||| |||||||||    
T  28030934 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgt 28030835  T
Q  452 aagatgttgtt 462  Q
    ||||| |||||    
T  28030834 aagatattgtt 28030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 354 - 459
Target Start/End: Complemental strand, 38153528 - 38153423
Alignment:
Q  354 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||||||||||||  ||||||  |||||||||||||||| ||| ||||| | ||  |||||||||||||| |||||||||||||| ||| |||||||    
T  38153528 tttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaa 38153429  T
Q  454 gatgtt 459  Q
    ||||||    
T  38153428 gatgtt 38153423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 44647975 - 44647856
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| ||| ||||||||||||  |||||| ||||||| | ||||||| ||| ||| |||||   || |||||||| |||||||||||||||||     
T  44647975 tactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatg 44647876  T
Q  443 ttagcatgtaagatgttgtt 462  Q
    ||||||||||||||||||||    
T  44647875 ttagcatgtaagatgttgtt 44647856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 15382682 - 15382568
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagca 448  Q
    |||||||||||||||||||||  | |||| |||||| |||||||||| | | ||||| ||||     ||||||| ||||||||||||||||||||||| |    
T  15382682 ctccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagta 15382583  T
Q  449 tgtaagatgttgttt 463  Q
    |||||||||||||||    
T  15382582 tgtaagatgttgttt 15382568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 30385392 - 30385291
Alignment:
Q  358 aaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatg 457  Q
    ||||||||||||  | ||||  |||||||||||||||| |  |||||||||||  || |||||||||||||||||||||||||| |||| ||||||||||    
T  30385392 aaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatg 30385293  T
Q  458 tt 459  Q
    ||    
T  30385292 tt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 455
Target Start/End: Original strand, 48375018 - 48375114
Alignment:
Q  359 aaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaaga 455  Q
    ||||| |||| ||||||||||||||| || ||||||||| | ||| |||||   || |||||||||||| |||||||||||||||||||||||||||    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaaga 48375114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 22575776 - 22575729
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  22575776 tttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 22575729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 450
Target Start/End: Complemental strand, 44644617 - 44644510
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||| ||| ||||||||||||  |||||| ||||||| | ||||||| ||| |||||||||   || |||||||| |||||||||||||||||     
T  44644617 tactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaatg 44644518  T
Q  443 ttagcatg 450  Q
    ||||||||    
T  44644517 ttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 3485459 - 3485349
Alignment:
Q  353 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgta 452  Q
    |||| ||||||||||||  | |||| |||| |||||||||| | | | |||||||||   || |||||||||||||||||||||||||| ||| ||||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T
Q  453 agatgttgttt 463  Q
    || ||||||||    
T  3485359 aggtgttgttt 3485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 42367543 - 42367442
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||||||||||||||| |||| ||||        |||||||||||| |||||||||   || |||||||||||| |||||||||||||| || |||    
T  42367543 tccgtttcaaaatacatgtcaaattcttgc--------ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacat 42367452  T
Q  450 gtaagatgtt 459  Q
    ||||||||||    
T  42367451 gtaagatgtt 42367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 40800643 - 40800529
Alignment:
Q  349 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtacttttt-aactaatatataaatacaaatattagc 447  Q
    |||| |||||||||| |||||  | |||| ||||||||| || |||| | | ||||||||||  || ||||| ||||||||||||| ||||||| |||||    
T  40800643 ctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatataa-tacaaatgttagc 40800545  T
Q  448 atgtaagatgttgttt 463  Q
    ||||||||||||||||    
T  40800544 atgtaagatgttgttt 40800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 7568692 - 7568628
Alignment:
Q  399 atttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||| ||  |||||||||||||||||||||||| |||| ||||  |||||||||||||||    
T  7568692 atttactttaactctactttttaactaatatataaatataaatgttagtgtgtaagatgttgttt 7568628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 31444996 - 31445043
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||    
T  31444996 tttttaactaatatataaacacaaatgtttgcatgtaagatgttgttt 31445043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 463
Target Start/End: Original strand, 25171240 - 25171274
Alignment:
Q  429 tataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||||||||||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgttt 25171274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 27984563 - 27984671
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    ||||||| ||||||||||||  | |||| |||  |||||||||||| |   ||||||||||  || |||||||||||||||  ||||||||| ||||| |    
T  27984563 tccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccata-tttttaactaatatacgaatacaaatgttagctt 27984661  T
Q  450 gtaagatgtt 459  Q
    ||||||||||    
T  27984662 gtaagatgtt 27984671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 455
Target Start/End: Original strand, 34634914 - 34635019
Alignment:
Q  350 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcat 449  Q
    |||||||| ||||| |||||  |  ||||||||||| | | ||||| | | ||| ||||| | || |||||||||||||||||||||||||| ||| |||    
T  34634914 tccgtttctaaataaatgtcgcaactttgcaatgtgaagttttcacataacttattttgataatattttttaactaatatataaatacaaatgttaacat 34635013  T
Q  450 gtaaga 455  Q
    ||||||    
T  34635014 gtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 453
Target Start/End: Original strand, 323990 - 324025
Alignment:
Q  418 tttaactaatatataaatacaaatattagcatgtaa 453  Q
    ||||||| ||||||||||||||||||||||||||||    
T  323990 tttaacttatatataaatacaaatattagcatgtaa 324025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 14777105 - 14777152
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||  |||||||||||||||||||  ||||||||||||||||    
T  14777105 tttttaactgttatataaatacaaatattaatatgtaagatgttgttt 14777152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 236684 - 236598
Alignment:
Q  126 atgacaaagtcatcataaattcgcacataaagtggaggtactgacgttcgaatcccgatcaaaatgtttggcctaacaattttgaca 212  Q
    ||||||||||||||||||| || ||||||||||| |||||| |  ||||||| |||| |||  | ||  ||||||||||||| ||||    
T  236684 atgacaaagtcatcataaactcacacataaagtgaaggtaccggggttcgaaccccggtcatgacgtccggcctaacaatttcgaca 236598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 9881349 - 9881395
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||||||||||||| ||| |||| ||| ||||||||||||||||    
T  9881349 tttttaactaatatatacatataaatgttatcatgtaagatgttgtt 9881395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 19895289 - 19895335
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||| ||||||||||| ||||||||||  |||||||||||||||    
T  19895289 tttttaattaatatataaacacaaatattaatatgtaagatgttgtt 19895335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 49948365 - 49948299
Alignment:
Q  117 atagaagaaatgacaaagtcatcataaattcgcacata-aagtggaggtactgacgttcgaatcccg 182  Q
    ||||| |||||||||||||||| ||||| || |||| | ||||||||||||||  ||||||||||||    
T  49948365 atagacgaaatgacaaagtcattataaactcacacacacaagtggaggtactggggttcgaatcccg 49948299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Complemental strand, 17306216 - 17306187
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaa 372  Q
    ||||||||||||||||||||||||||||||    
T  17306216 tacttcctccgtttcaaaatacatgtccaa 17306187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 16689862 - 16689941
Alignment:
Q  381 atgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||||||||||| | | |||||||||   || ||| |||||||||||||||||||   ||| |||||||| |||||||||    
T  16689862 atgtgcactattcacataacttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgttt 16689941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 162099 - 161979
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||  ||||||||||||||| ||||||||||||||    
T  162099 tactccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaata 162000  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  161999 ttagcatgtaagatgttgttt 161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 100909 - 100789
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||  || |||||||||||| ||||||||||||||    
T  100909 tactccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaata 100810  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    ||||| |||||||||||||||    
T  100809 ttagcgtgtaagatgttgttt 100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 352 - 463
Target Start/End: Complemental strand, 68022 - 67911
Alignment:
Q  352 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgt 451  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||||||| |||||    
T  68022 cgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgt 67923  T
Q  452 aagatgttgttt 463  Q
    ||||||||||||    
T  67922 aagatgttgttt 67911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 13979 - 13859
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||| ||||||||| |||||||||||| ||| |||| |||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||| |||||    
T  13979 tactccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaata 13880  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  13879 ttagcatgtaagatgttgttt 13859  T

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Target: scaffold0295; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 9372 - 9433
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttac 404  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  9372 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttac 9433  T

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Target: scaffold0056 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 70960 - 71080
Alignment:
Q  342 ttacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaat 441  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||  || |||||||||||| |||||||||||||    
T  70960 ttactccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaat 71058  T
Q  442 attagcatgtaagatgttgttt 463  Q
    |||||||| |||||||||||||    
T  71059 attagcatttaagatgttgttt 71080  T

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Target: scaffold0225 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 9095 - 8975
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||||| ||||||| ||  | |||| |||| |||| ||||||| | | ||||||||||   | ||||||||||||||||||||||||||     
T  9095 tacttcatccgtttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatg 8996  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  8995 ttagcatgtaagatgttgttt 8975  T

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Target: scaffold0029 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 138292 - 138172
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||| ||||| ||||||| ||  | |||| |||| |||| ||||||| | | ||||||||||   | ||||||||||||||||||||||||||     
T  138292 tacttcatccctttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatg 138193  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  138192 ttagcatgtaagatgttgttt 138172  T

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Target: scaffold0099 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 28917 - 28798
Alignment:
Q  342 ttacttcctccgtttcaaaa-tacatgtccaatttttgcaatgtgca-ctattcacttgatttactttgacagtactttttaactaatatataaatacaa 439  Q
    ||||| |||||||||||||| ||||||||  | |||| ||||||||| |||||||| |   ||||||||||  || |||||||||||| |||||||||||    
T  28917 ttactccctccgtttcaaaaatacatgtcatagttttacaatgtgcaactattcacatagcttactttgaccatattttttaactaatttataaatacaa 28818  T
Q  440 atattagcatgtaagatgtt 459  Q
    |||||||||| |||||||||    
T  28817 atattagcatataagatgtt 28798  T

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Target: scaffold0262 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 22780 - 22900
Alignment:
Q  343 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgacagtactttttaactaatatataaatacaaata 442  Q
    |||||| ||||||||| ||||||| ||  | |||| |||| |||| ||||||| | | ||| ||||||   | ||||||||| ||||||||||||||||     
T  22780 tacttcatccgtttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatg 22879  T
Q  443 ttagcatgtaagatgttgttt 463  Q
    |||||||||||||||||||||    
T  22880 ttagcatgtaagatgttgttt 22900  T

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Target: scaffold0595 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 3990 - 4061
Alignment:
Q  385 gcactattcacttgatttactttgacagtactttttaactaatatataaatacaaatattagcatgtaagat 456  Q
    ||||||||||| |   ||||||||||  || |||||||||||||||||||||||||| ||||||||||||||    
T  3990 gcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 4061  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 53609 - 53562
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  53609 tttttaactaatatataattacaaattttagcatgcaagatgttgttt 53562  T

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Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 217064 - 217017
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 463  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  217064 tttttaagtaatatataaatacaaatgttagcatataagatgttgttt 217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 1593 - 1639
Alignment:
Q  416 tttttaactaatatataaatacaaatattagcatgtaagatgttgtt 462  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||    
T  1593 tttttaattaatgtataaatacaaatattagcatgtaagatattgtt 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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