View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13093_high_3 (Length: 207)
Name: NF13093_high_3
Description: NF13093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13093_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 260238 - 260413
Alignment:
| Q |
13 |
attattctctaaagtgtaaccagtccgtgaatgtcattcttcctcataaagccttatctccttacttcaatgctctagtcctttcttcaatgtatttgaa |
112 |
Q |
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|||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
260238 |
attaatctctaaagtgtaaccagtctgtgaatgtcattcttcctcataaagccttatctccttacttcaatgctctagtcctttcttcaatgtatttgaa |
260337 |
T |
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| Q |
113 |
tatatgttacagcccatttaaatgaacaaaatgaaaactcaaatccactcatcaactttcaacccatcttacacta |
188 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
260338 |
tatatgttgcagcccatttaaatgaacaaaatgaaaactcaaatccactcatcaactttcaacccatcttacacta |
260413 |
T |
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