View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13095_low_12 (Length: 233)
Name: NF13095_low_12
Description: NF13095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13095_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 38832170 - 38832377
Alignment:
| Q |
10 |
tccccgccacgtcatcattccctacactcccatcctccaccgcgtaattgcatggccccaccttctccattatccgccgtgagccgccgtccccggcggc |
109 |
Q |
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| T |
38832170 |
tccccgccacgtcatcattccctacactcccatcctccaccgcgtaattgcatggccccaccttctccattatccgccgtgagccgccgtccccggcggc |
38832269 |
T |
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| Q |
110 |
gacaaccaccgtgaacttcattctcaacagtctcgttttccgtggagaatagccatatctgatcccgtaatatccggcggtcatctccgatcgccggagt |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
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| T |
38832270 |
gacaaccaccgtgaacttcattctcaacagtctcgttttccgtggagaatagccatatctgatcccgtaatctccggcagtcatctccgatcgccggagt |
38832369 |
T |
|
| Q |
210 |
gtaacacc |
217 |
Q |
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|||||||| |
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| T |
38832370 |
gtaacacc |
38832377 |
T |
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