View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13096_low_26 (Length: 320)

Name: NF13096_low_26
Description: NF13096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13096_low_26
NF13096_low_26
[»] chr7 (1 HSPs)
chr7 (13-303)||(30968024-30968314)


Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 13 - 303
Target Start/End: Original strand, 30968024 - 30968314
Alignment:
Q  13 aatatagacgcaaaattttgtataaacattcgtgtaagttaaagttgcagccatgtgattaggagatcacaagtataagccgtgaaatcaacctcttgca 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30968024 aatatagacgcaaaattttgtataatcattcgtgtaagttaaagttgcagccatgtgattaggagatcacaagtataagctgtgaaatcaacctcttgca 30968123  T
Q  113 aatgcaaagactgtttgaaattcttggaatttcggtagggcttaagtcaacccttacaaaattgtcttattagatgaagactgccaccacttataaactc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30968124 aatgcaaagactgtttgaaattcttggaatttcggtagggcttaagtcaacccttacaaaattgtcttattagatgaagactgccaccacttataaaccc 30968223  T
Q  213 actttcaggactctgccatgacaattttcacttttatttacatgatgaaccttaccttttttatgtggtttcccgcttcatcccaaagaat 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30968224 actttcaggactctgccatgacaattttcacttttatttacatgatgaaccttaccttttttatgtggtttcccgcttcatcccaaagaat 30968314  T

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