View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13096_low_8 (Length: 511)
Name: NF13096_low_8
Description: NF13096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13096_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 1 - 501
Target Start/End: Complemental strand, 34857646 - 34857146
Alignment:
| Q |
1 |
cttggttagagatacttatgcgttgcattgtctttgctaaatatgttttttcttgcaatatgggccacaagtacaatatgctctatgcttacctgtggcc |
100 |
Q |
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| T |
34857646 |
cttggttagagatacttatgtgttgcattgtctttgctaaatatgttttttcttgcaatatgggccacaagtacaatatgctctatgcttacctgtggcc |
34857547 |
T |
|
| Q |
101 |
tgtattgtaattactaaactgcttactatgcctacgggtgtttgtgaaaaaatacatcaataattcatgatgaatatgaaaggtgactttgtttaaacaa |
200 |
Q |
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| T |
34857546 |
tgtattgtaattactaaactgcttactatgcctacgggtgtttgtgaaaaaatacatcaataattcatgatgaatatgaaaggtgactttgtttaaacaa |
34857447 |
T |
|
| Q |
201 |
gcctcatactattacgaatannnnnnnaagggtatattctggatagatcttatgacgtaaagccatcgtcttttctgatgttagatgaaggtcagaagta |
300 |
Q |
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| T |
34857446 |
gcctcgtactattatgaatatttttttaagggtatattctggatagatcctatgacgtaaagccatcgtcttttctgatgttagatgaaggtcagaagta |
34857347 |
T |
|
| Q |
301 |
tcatatacacagttgtatagatgaaataaatagacatttaaagaatcgcggtctctggatgatgttggacaactttttcctctgttgtgcccttcaaaag |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34857346 |
tcatatacacagttgtatagatgaaataaatagacatttaaagaatcgcggtctctggatgatgttggacaactttttcctctgttgtgcccttcaaaag |
34857247 |
T |
|
| Q |
401 |
gagaagggggtggaatatatgcaatagtaatcactaacagttctataatatgaatatcccttgactattaaagttggtaactgttatgcagcctacctat |
500 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
34857246 |
gagaagggggtggaatatatgcaatagtaatccctaacagttctataatatgaatatcccttgactattaaagtttgtaactgttatgcagcctacctat |
34857147 |
T |
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| Q |
501 |
g |
501 |
Q |
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| T |
34857146 |
g |
34857146 |
T |
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