View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13097_low_3 (Length: 286)
Name: NF13097_low_3
Description: NF13097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13097_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 19568029 - 19567777
Alignment:
| Q |
15 |
tattacagctcaaaccatgttatagtttaacactagctgcttgttttttctgtttcaattcaaccaaaaattaaatttataaattcctgtttttctatcc |
114 |
Q |
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| T |
19568029 |
tattacagctcaaacaatgttatagtttaacactagctgcttgttttttctgtttcaattcaaccaaaaattaaatttataaattcctgtttttctatcc |
19567930 |
T |
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| Q |
115 |
atggaaacaaaacaaatccattcataagacgaacttaaatttcgagcaccccggtctgattttttatgttaatttccatcataaactaagaaaatcatca |
214 |
Q |
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| T |
19567929 |
atggaaacaaaacaaatccattcataagacgaacttaaatttcgagcaccccggtctgattttttatgttaatttccatcataaactaagaaaatcatca |
19567830 |
T |
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| Q |
215 |
cacggaccataattctaattgaattgctctacgaaaaaccaacacgtttcata |
267 |
Q |
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| T |
19567829 |
cacgggccataattctaattgaattgctctacgaaaaaccaacacgtttcata |
19567777 |
T |
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