View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13098_high_7 (Length: 316)
Name: NF13098_high_7
Description: NF13098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13098_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 18 - 303
Target Start/End: Original strand, 41066543 - 41066828
Alignment:
| Q |
18 |
gttactactctctatttttctctgtatcatttgatacttgttggatattaaaattctcgtatcttcacttaaagttactgataaagatgtagacagttct |
117 |
Q |
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| T |
41066543 |
gttactactctctatttttctctttatcatttgatacttgttggatattaaaattctcgtatcttcacttaaagttactgataaagatgtagacagttct |
41066642 |
T |
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| Q |
118 |
tttatccttcatcatcaaactatatatagttctcttttgtaatggatttacagcaaaggttaaagaaaaggacaaagtggaagcattgtacaagcatgtg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41066643 |
tttatccttcatcatcaaactatatatagttctcttttgtaatggatttacagcaaaggttaaagaaaaggacaaagtggaagcattgtacaagcatgtg |
41066742 |
T |
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| Q |
218 |
tggaacttcagtacgtgcggaagatatataaaagaaatgactcatatagttcgccccttaaagttttaagtaaagatgttgtgttc |
303 |
Q |
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| T |
41066743 |
tggaacttcagtacgtgcggaagatatataaaagaaatgactcatatagttcgccccttaaagttttaagtaaagatgttgtgttc |
41066828 |
T |
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