View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1309_low_15 (Length: 319)
Name: NF1309_low_15
Description: NF1309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1309_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 19704610 - 19704830
Alignment:
| Q |
5 |
gcggaaaccgcagagagccgcaactatacaagtccaagagagtcgaagtttcaacaagtgggaagaagtcagagttgtgttagtcacaatagatggggtg |
104 |
Q |
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| T |
19704610 |
gcggaaaccgcagagagccgcaactatacaagtccaagagagtcgaagtttcaacaagtgggaagaagtcagagttgtgttagtcacaatagatggggtg |
19704709 |
T |
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| Q |
105 |
ctgcaaagaggagtcaagtcgcccgtgggatgctagtagaaaaccaaaggagtttcatgaatgtgaagaagatgtattcacaaggagcaacttctcagag |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
19704710 |
ctgcaaagaggagtcaagtcgcccgtgggatgctagtagaaaaccaaaggagtttcatgaatgtcaagaagatgtattcacaaggagcaacttctcagag |
19704809 |
T |
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| Q |
205 |
aagcaatgaatatttcagccc |
225 |
Q |
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||||||||| ||||||||||| |
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| T |
19704810 |
aagcaatgagtatttcagccc |
19704830 |
T |
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