View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13100_high_5 (Length: 307)
Name: NF13100_high_5
Description: NF13100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13100_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 19 - 297
Target Start/End: Complemental strand, 8036609 - 8036330
Alignment:
| Q |
19 |
tttatagcaagcaataaccatttaaaatgttaattcaatccataacaaatatagggagataatgtgtgtataatctaaatgctatggttaccttcaagag |
118 |
Q |
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| T |
8036609 |
tttatagcaagcaataaacatttaaaatgttaattcaatccataacaaatatagggagataatgtgtgtataatctaaatgatatggttaccttcaagag |
8036510 |
T |
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| Q |
119 |
aagagacagttttgatgagtttctttttgcattttggacaatcgatattaaccttcaacacagttttcttaaccatggagaaattatcaaccagctttgt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
8036509 |
aagagacagttttgatgagtttctttttgcattttggacaatcgatattaaccttcaatacagttttcttaaccatggagaaattatcaaccagctttgt |
8036410 |
T |
|
| Q |
219 |
tgtttctgatctcactagaatgtttgagt-aaatactactaatccacaaggtttttcaaactttacaataactttggtct |
297 |
Q |
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||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| |
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| T |
8036409 |
tgtttctgatctcactagaatgtttaagtaaaatactactaatacacaaggtttttcaaattttacaataactttggtct |
8036330 |
T |
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