View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13103_high_19 (Length: 264)
Name: NF13103_high_19
Description: NF13103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13103_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 51837013 - 51836777
Alignment:
| Q |
6 |
actgatatgaactaaaagaatatgagtttgaggtcgtaggtttaaatatgaacaaagagtaaaaatactattctaacaaaccaactaccaacatttattt |
105 |
Q |
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| T |
51837013 |
actgatttgaactaaaagaatatgagtttgaggtcgtaggtttaaatctgaacaaagagtaaaaatactattttaacaaaccaactaccaacatttattt |
51836914 |
T |
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| Q |
106 |
aaaaaacaataatttatattcctgttagtatataagcnnnnnnngattttgtaaaaacaatagctttgttgaattaatttcttgaaagatacatgcatat |
205 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51836913 |
aaaaaacaataatttatattcctgttagtatataagctttttttgattctgtaaaaacaatagctttgttgaattaatttcttgaaagatacatgcatat |
51836814 |
T |
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| Q |
206 |
gcatatgatatatgcgctcatcttctagccttgagtg |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
51836813 |
gcatatgatatatgcgctcatcttctagccttgagtg |
51836777 |
T |
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