View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13104_low_5 (Length: 263)
Name: NF13104_low_5
Description: NF13104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13104_low_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 9 - 263
Target Start/End: Original strand, 46090631 - 46090888
Alignment:
| Q |
9 |
attattcttagcattgcaggtactatcttgtcttatctgccatttaattgctgcagttacaattcaatttcattaatgtaaacgaaattcgaattacann |
108 |
Q |
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| T |
46090631 |
attattcttagcattgcaggtactaccttgtcttatctgccatttaatagttgcagttacaattcaatttcattaatgtaaacgaaattcgaattacatt |
46090730 |
T |
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| Q |
109 |
nnnnnnggaccacttgtgatttttaaaataatatttgaatattgtttnnnnnnn--ctcttaaattgcagacactgcatgatcttataccatgcgacttt |
206 |
Q |
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| T |
46090731 |
ttttttggaccacttgtgatttttaaaataatatttgaatattgtttaaaaaaaaactcttaaattgcagacactgcatgatcttataccatgcgacttt |
46090830 |
T |
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| Q |
207 |
aattg-attaagaagcttggacccttcacattagaggctcaattcaatactgaacaat |
263 |
Q |
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| T |
46090831 |
aattggattaagaagcttggacccttcacattagaggctcaattcaatactgaacaat |
46090888 |
T |
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