View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13105_high_15 (Length: 250)

Name: NF13105_high_15
Description: NF13105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13105_high_15
NF13105_high_15
[»] chr1 (39 HSPs)
chr1 (13-246)||(33124568-33124799)
chr1 (13-246)||(30899552-30899784)
chr1 (16-246)||(18127875-18128101)
chr1 (13-246)||(48722308-48722539)
chr1 (18-246)||(10109621-10109846)
chr1 (13-246)||(50552392-50552621)
chr1 (13-223)||(12884099-12884304)
chr1 (13-245)||(51110040-51110268)
chr1 (16-250)||(52055451-52055681)
chr1 (16-246)||(20905224-20905452)
chr1 (13-246)||(17487221-17487452)
chr1 (13-246)||(14084638-14084867)
chr1 (14-246)||(6150619-6150848)
chr1 (13-185)||(27703527-27703695)
chr1 (16-246)||(29208036-29208262)
chr1 (25-185)||(25930512-25930670)
chr1 (84-246)||(28885609-28885770)
chr1 (78-245)||(30004847-30005006)
chr1 (75-185)||(12971362-12971472)
chr1 (120-246)||(8-133)
chr1 (75-185)||(50371090-50371200)
chr1 (72-185)||(5560436-5560549)
chr1 (75-178)||(44836726-44836829)
chr1 (93-183)||(17674354-17674444)
chr1 (121-183)||(24556808-24556870)
chr1 (91-183)||(37873762-37873854)
chr1 (75-183)||(42740066-42740174)
chr1 (120-183)||(13120866-13120929)
chr1 (75-185)||(6333514-6333623)
chr1 (121-183)||(22386837-22386899)
chr1 (13-56)||(20470625-20470668)
chr1 (75-183)||(15441246-15441355)
chr1 (142-185)||(1269574-1269617)
chr1 (121-176)||(3907473-3907528)
chr1 (14-113)||(28189296-28189391)
chr1 (120-164)||(32810370-32810414)
chr1 (75-183)||(26486373-26486473)
chr1 (121-185)||(9777415-9777480)
chr1 (134-179)||(38263879-38263924)
[»] chr2 (35 HSPs)
chr2 (13-245)||(19367358-19367586)
chr2 (13-246)||(26151685-26151915)
chr2 (14-246)||(42411496-42411723)
chr2 (13-245)||(13020319-13020548)
chr2 (13-246)||(7993530-7993759)
chr2 (13-245)||(18676249-18676478)
chr2 (14-246)||(41096475-41096704)
chr2 (13-246)||(45618874-45619102)
chr2 (13-245)||(25222220-25222448)
chr2 (13-246)||(4855887-4856119)
chr2 (13-242)||(6530556-6530781)
chr2 (75-245)||(2063761-2063930)
chr2 (13-245)||(42759695-42759915)
chr2 (16-245)||(45042288-45042515)
chr2 (72-185)||(34061854-34061967)
chr2 (13-246)||(36481303-36481520)
chr2 (91-183)||(39081370-39081462)
chr2 (105-185)||(18172938-18173018)
chr2 (75-183)||(1418866-1418973)
chr2 (13-185)||(12269323-12269490)
chr2 (105-185)||(18916052-18916132)
chr2 (75-185)||(36059903-36060013)
chr2 (78-185)||(38985707-38985814)
chr2 (121-183)||(15457502-15457564)
chr2 (121-183)||(13997316-13997378)
chr2 (121-185)||(27302526-27302590)
chr2 (105-183)||(21747230-21747308)
chr2 (121-183)||(38599404-38599466)
chr2 (137-185)||(17117643-17117691)
chr2 (91-183)||(29480637-29480729)
chr2 (78-185)||(13001604-13001703)
chr2 (79-181)||(31273168-31273269)
chr2 (91-183)||(18482506-18482599)
chr2 (86-185)||(1226264-1226364)
chr2 (75-183)||(12072456-12072558)
[»] chr4 (26 HSPs)
chr4 (13-246)||(19661277-19661505)
chr4 (14-246)||(23426104-23426332)
chr4 (13-245)||(32130729-32130956)
chr4 (13-245)||(44477935-44478165)
chr4 (13-245)||(28463527-28463755)
chr4 (16-246)||(53011613-53011838)
chr4 (13-245)||(23256493-23256718)
chr4 (18-246)||(27632300-27632524)
chr4 (13-246)||(11681680-11681910)
chr4 (13-246)||(11689959-11690189)
chr4 (75-246)||(29579836-29580006)
chr4 (84-246)||(41038215-41038376)
chr4 (79-244)||(16072554-16072722)
chr4 (13-250)||(29221555-29221788)
chr4 (13-150)||(21168954-21169088)
chr4 (75-185)||(21791545-21791655)
chr4 (75-183)||(35653980-35654088)
chr4 (75-183)||(43154788-43154896)
chr4 (105-185)||(45172643-45172722)
chr4 (91-185)||(5545301-5545395)
chr4 (109-183)||(34982214-34982288)
chr4 (75-183)||(22423640-22423748)
chr4 (121-185)||(55134210-55134274)
chr4 (91-185)||(10575521-10575615)
chr4 (121-183)||(24449128-24449190)
chr4 (16-56)||(48512345-48512385)
[»] chr3 (35 HSPs)
chr3 (13-246)||(51939493-51939722)
chr3 (13-246)||(8364069-8364299)
chr3 (13-246)||(21784721-21784950)
chr3 (13-243)||(28132677-28132902)
chr3 (13-246)||(41706990-41707222)
chr3 (13-246)||(29387692-29387921)
chr3 (13-246)||(18408089-18408317)
chr3 (13-245)||(52655062-52655292)
chr3 (16-246)||(23164510-23164735)
chr3 (13-246)||(46791635-46791864)
chr3 (18-245)||(25599026-25599249)
chr3 (14-246)||(23067662-23067892)
chr3 (13-246)||(24252516-24252746)
chr3 (13-246)||(27729707-27729936)
chr3 (75-185)||(13401415-13401525)
chr3 (75-246)||(54430508-54430678)
chr3 (76-183)||(7767020-7767127)
chr3 (75-183)||(42009262-42009370)
chr3 (91-183)||(36538186-36538278)
chr3 (121-183)||(27303189-27303251)
chr3 (91-183)||(46904714-46904806)
chr3 (121-185)||(48627027-48627091)
chr3 (78-185)||(21596294-21596401)
chr3 (121-183)||(50677314-50677376)
chr3 (78-179)||(19965884-19965985)
chr3 (75-246)||(6715405-6715565)
chr3 (72-176)||(1255057-1255161)
chr3 (122-245)||(20762052-20762174)
chr3 (75-184)||(4207357-4207460)
chr3 (121-185)||(40152127-40152192)
chr3 (83-183)||(51146902-51147001)
chr3 (13-56)||(27110931-27110974)
chr3 (121-185)||(1649829-1649893)
chr3 (194-245)||(27110811-27110862)
chr3 (75-164)||(43905862-43905951)
[»] chr6 (28 HSPs)
chr6 (13-246)||(2618253-2618481)
chr6 (13-246)||(6754104-6754332)
chr6 (13-245)||(12614655-12614881)
chr6 (13-245)||(6360658-6360884)
chr6 (13-246)||(3514788-3515017)
chr6 (14-246)||(57586-57814)
chr6 (75-246)||(29149359-29149529)
chr6 (17-246)||(7525104-7525330)
chr6 (13-246)||(29401037-29401266)
chr6 (22-185)||(628093-628254)
chr6 (75-183)||(3748568-3748676)
chr6 (75-185)||(30915364-30915474)
chr6 (121-185)||(31861003-31861067)
chr6 (75-185)||(1690631-1690741)
chr6 (121-183)||(21946109-21946171)
chr6 (100-245)||(22503727-22503868)
chr6 (121-185)||(14893415-14893479)
chr6 (13-56)||(31258581-31258624)
chr6 (121-185)||(29308465-29308529)
chr6 (105-164)||(31234899-31234956)
chr6 (75-185)||(1093039-1093148)
chr6 (144-185)||(6294279-6294320)
chr6 (121-185)||(19231615-19231678)
chr6 (86-185)||(350381-350481)
chr6 (105-164)||(31244036-31244092)
chr6 (75-158)||(15035805-15035887)
chr6 (137-185)||(11088564-11088613)
chr6 (75-115)||(24455175-24455215)
[»] chr5 (31 HSPs)
chr5 (13-246)||(26377711-26377942)
chr5 (13-246)||(13474527-13474756)
chr5 (13-250)||(13423758-13423994)
chr5 (13-245)||(13656105-13656335)
chr5 (72-246)||(19099252-19099425)
chr5 (13-223)||(36718527-36718735)
chr5 (13-246)||(12661201-12661435)
chr5 (75-183)||(138100-138208)
chr5 (75-185)||(43511574-43511684)
chr5 (72-185)||(29156143-29156256)
chr5 (75-185)||(10591271-10591381)
chr5 (91-185)||(20975957-20976051)
chr5 (75-185)||(42291879-42291989)
chr5 (14-127)||(8398879-8398989)
chr5 (75-140)||(26311962-26312027)
chr5 (121-185)||(17513934-17513998)
chr5 (120-183)||(18873458-18873521)
chr5 (75-179)||(10033502-10033607)
chr5 (16-174)||(27351250-27351404)
chr5 (75-185)||(40779148-40779257)
chr5 (105-185)||(5829371-5829449)
chr5 (75-185)||(4734580-4734690)
chr5 (75-185)||(40956269-40956379)
chr5 (128-185)||(3349727-3349784)
chr5 (122-185)||(33281677-33281740)
chr5 (122-183)||(17325847-17325909)
chr5 (123-183)||(7390400-7390460)
chr5 (128-183)||(16515533-16515588)
chr5 (78-176)||(23069179-23069277)
chr5 (105-164)||(37029051-37029108)
chr5 (72-185)||(931333-931441)
[»] chr8 (28 HSPs)
chr8 (16-246)||(43968008-43968234)
chr8 (14-246)||(18420547-18420775)
chr8 (16-243)||(13585199-13585422)
chr8 (13-246)||(7857982-7858211)
chr8 (13-246)||(43926261-43926490)
chr8 (75-246)||(44664984-44665154)
chr8 (75-240)||(3471556-3471720)
chr8 (75-246)||(18112072-18112243)
chr8 (16-178)||(42951774-42951937)
chr8 (75-238)||(27074530-27074692)
chr8 (75-185)||(5869320-5869428)
chr8 (13-183)||(32098178-32098344)
chr8 (75-185)||(34523949-34524059)
chr8 (120-243)||(1004059-1004183)
chr8 (92-183)||(3628747-3628838)
chr8 (121-185)||(12531561-12531625)
chr8 (92-183)||(39697938-39698029)
chr8 (105-183)||(23567274-23567352)
chr8 (125-185)||(30915285-30915346)
chr8 (105-185)||(29372343-29372423)
chr8 (13-55)||(3445579-3445621)
chr8 (121-183)||(35874928-35874990)
chr8 (13-56)||(1003986-1004029)
chr8 (121-176)||(42076110-42076165)
chr8 (17-56)||(18112011-18112050)
chr8 (137-183)||(36515156-36515202)
chr8 (148-177)||(3575146-3575175)
chr8 (137-185)||(42777763-42777811)
[»] chr7 (34 HSPs)
chr7 (13-246)||(33419055-33419285)
chr7 (13-246)||(36796309-36796538)
chr7 (13-246)||(4099865-4100095)
chr7 (13-245)||(18015519-18015748)
chr7 (16-246)||(6380022-6380249)
chr7 (13-246)||(46221641-46221870)
chr7 (13-250)||(11672481-11672716)
chr7 (13-246)||(42161060-42161289)
chr7 (75-246)||(33910020-33910190)
chr7 (13-185)||(8358292-8358461)
chr7 (72-245)||(44893968-44894140)
chr7 (78-245)||(7636264-7636431)
chr7 (106-246)||(12251226-12251365)
chr7 (75-185)||(26633319-26633429)
chr7 (75-185)||(26282540-26282650)
chr7 (105-185)||(40001694-40001774)
chr7 (78-185)||(30739082-30739189)
chr7 (75-183)||(36438351-36438459)
chr7 (75-180)||(40737994-40738099)
chr7 (75-183)||(9479083-9479191)
chr7 (105-185)||(773882-773962)
chr7 (75-183)||(32956731-32956839)
chr7 (84-185)||(41908143-41908244)
chr7 (91-183)||(18895397-18895489)
chr7 (122-181)||(42312012-42312071)
chr7 (75-185)||(1365965-1366075)
chr7 (75-173)||(25061859-25061957)
chr7 (124-185)||(3799758-3799819)
chr7 (13-105)||(12251466-12251554)
chr7 (13-56)||(38525082-38525125)
chr7 (121-183)||(7366689-7366751)
chr7 (121-185)||(44876153-44876217)
chr7 (144-185)||(25610091-25610132)
chr7 (127-181)||(41852302-41852356)
[»] scaffold0126 (1 HSPs)
scaffold0126 (75-246)||(16666-16836)
[»] scaffold0181 (1 HSPs)
scaffold0181 (75-245)||(17071-17240)
[»] scaffold0564 (1 HSPs)
scaffold0564 (22-246)||(979-1187)
[»] scaffold0100 (1 HSPs)
scaffold0100 (75-185)||(46171-46281)
[»] scaffold0606 (1 HSPs)
scaffold0606 (105-179)||(8399-8473)
[»] scaffold0035 (2 HSPs)
scaffold0035 (144-245)||(22744-22844)
scaffold0035 (13-56)||(22888-22931)


Alignment Details
Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 33124799 - 33124568
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||| ||||||||| ||||||||| |||    
T  33124799 aatatatatgttatatccttttctttctttagtacacgtttgagtttttttt-tagactctatagttctcctttttctacataaatcggatcctattaaa 33124701  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||| ||||||    
T  33124700 ccacctctaatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-tttttttcttcacataaaccattcgt 33124602  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    | ||||||||| ||||||| ||||||||||||||    
T  33124601 tataccattttccacaacagaggagtgacaaatc 33124568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 30899552 - 30899784
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  30899552 aatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactcta--gttctcctttttgtacataaatcggatcctatcaaa 30899649  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-nnnnnnnncttcgcataaactattcg 211  Q
     || || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||         |||||||||||| |||||    
T  30899650 tcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttttcttcgcataaaccattcg 30899749  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||| |||| ||||||| |||| |||||||||    
T  30899750 ttttacccttttccacaacagaggaatgacaaatc 30899784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 18128101 - 18127875
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||| ||||||||||||||||||||||||||        ||||| ||||  ||||||||||| |||| ||||| ||||||||||||||||    
T  18128101 atatatgttatatcattttctttctttagtacacgtttgagttttttttctagattcta--gttctcctttt-gtacgtaaatcggatcctatcaaacca 18128005  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |        ||||||||||||||||||||||    
T  18128004 cccataatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaatta-tttttttcttcgcataaactattcgtttt 18127906  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||| |||| ||||||||||||||||||||||    
T  18127905 acccttttccacaacaaaggagtgacaaatc 18127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 48722539 - 48722308
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnn-ctagactctatagttctcctttttgtacataaattggatcctatcaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  48722539 aatatatatgttatatccttttctttctttagtacacgtttgagtttttttttctagactctat--ttctcatttttgtacataaatcggatcctatcaa 48722442  T
Q  112 accatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    |||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||        |||||||||||| |||||    
T  48722441 accacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatca-tttttttcttcgcataaaccattcg 48722343  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||| |||| ||||||| ||||||||||||||    
T  48722342 ttttacccttttccacaacagaggagtgacaaatc 48722308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 10109621 - 10109846
Alignment:
Q  18 atatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaaccatc 117  Q
    |||||||||||| |||||||| |||| ||||||||||||        ||||||||||  ||||||||||||||||||||||||||||||||||||||| |    
T  10109621 atatgttatatcattttctttttttattacacgtttgagttttttttctagactcta--gttctcctttttgtacataaattggatcctatcaaaccacc 10109718  T
Q  118 cataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttac 217  Q
      ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  10109719 actaatttgtataatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatca-tttttttcttcgcataaactattcgttttac 10109817  T
Q  218 cattttacacaacaaaggagtgacaaatc 246  Q
    | |||| ||||||| ||||||||||||||    
T  10109818 ccttttccacaacagaggagtgacaaatc 10109846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 50552392 - 50552621
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||         |||||||||  |||||||||||||||||||||| |||||||||||||    
T  50552392 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttg-tagactcta--gttctcctttttgtacataaatcggatcctatcaaa 50552488  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||        ||||| |||||| |||| |    
T  50552489 ccacccctaatttgtataatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgtataaaccattcat 50552587  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  50552588 tttacctttttccacaacataggagtgacaaatc 50552621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 12884304 - 12884099
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||  ||| |||||||||||||||||| |||||||||||||    
T  12884304 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagactcta--gttttcctttttgtacataaatcggatcctatcaaa 12884208  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  12884207 ccacccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatca--ttttttcttcgcataaaccattcgt 12884110  T
Q  213 tttaccatttt 223  Q
    |||||| ||||    
T  12884109 tttaccctttt 12884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 51110268 - 51110040
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        |||||||  |||||| |||||||||||||||||| |||||||||||||    
T  51110268 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagact--atagttatcctttttgtacataaatcggatcctatcaaa 51110172  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || |||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |        |||||||||||| ||| ||    
T  51110171 ccacccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaat-aagttttttcttcgcataaaccatttgt 51110073  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||| | |||| |||||||||||||||||||||    
T  51110072 tttatccttttccacaacaaaggagtgacaaat 51110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 52055451 - 52055681
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||| ||||||||||| |||| |||||||||         |||||||||  ||||||||||||||||||||||   ||| |||||||| |    
T  52055451 atatatgttatatcattttctttcttcagtatacgtttgagttttttttttagactcta--gttctcctttttgtacataaatctaatcatatcaaacta 52055548  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
    |||||||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||        |||||||||||| |||||||||    
T  52055549 tccataatttatataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatca-gtttttccttcgcataaaccattcgtttt 52055647  T
Q  216 accattttacacaacaaaggagtgacaaatctaaa 250  Q
    ||| |||||||||| | ||||||||||||||||||    
T  52055648 acccttttacacaa-agaggagtgacaaatctaaa 52055681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 20905452 - 20905224
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    ||||||||||||| |||||||||||||||||||||||||||        ||||||||||  ||||||||||||||||||||||   ||||||||||||||    
T  20905452 atatatgttatattcttttctttctttagtacacgtttgagttttatttctagactcta--gttctcctttttgtacataaatctaatcctatcaaacca 20905355  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     || ||||||||||||||||||| | |||||||||| ||  ||||||||||||||||||||||||||| |        ||||| |||||| |||||||||    
T  20905354 gccctaatttgtataatcacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaat-aatttttttcttcgtataaaccattcgtttt 20905256  T
Q  216 a-ccattttacacaacaaaggagtgacaaatc 246  Q
    | || |||| ||||||| ||||||||||||||    
T  20905255 accctttttccacaacagaggagtgacaaatc 20905224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 17487452 - 17487221
Alignment:
Q  13 aatatatatgttatatccttttctttctttagt--acacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatca 110  Q
    |||||||||||||||| ||||||||||||||||  |||| ||||||        ||||||||||  |||||||||||| ||||||||| |||||||||||    
T  17487452 aatatatatgttatattcttttctttctttagtgtacacatttgagttttttt-ctagactcta--gttctcctttttttacataaatcggatcctatca 17487356  T
Q  111 aaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattc 210  Q
    ||||| || |||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||        ||| |||||||| ||||    
T  17487355 aaccacccctaatttatataatcacttaataaatcaatttggaaagttatttcattgaaagaatcacaacaatca-tttttttctttgcataaaccattc 17487257  T
Q  211 gttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| | |||| ||||||| ||||||||||||||    
T  17487256 gttttatccttttccacaacagaggagtgacaaatc 17487221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 14084867 - 14084638
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||         ||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  14084867 aatatatatgttatatcattttctttcttcagtacaggtttga--attttttctagactcta--gttctcctttttgtacataaatctgatcctatcaaa 14084772  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
     || || |||  |||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||        |||||||||||| ||||||    
T  14084771 tcacccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatcaatttttttcttcgcataaaccattcgt 14084672  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| || | ||||||| ||||||||||||||    
T  14084671 tttacccttctccacaacagaggagtgacaaatc 14084638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 6150619 - 6150848
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    ||||||||||||||| ||||||||||||   || |||||||||        ||||||||||  ||||||||||||||||||||||  |||||||||||||    
T  6150619 atatatatgttatattcttttctttcttcgctatacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcagatcctatcaaac 6150715  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtt 213  Q
    || || |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||| |||||||    
T  6150716 cacccctaatttatataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-attttttcttcacataaaccattcgtt 6150814  T
Q  214 ttacc-attttacacaacaaaggagtgacaaatc 246  Q
    |||||  |||| ||||||| ||||||||||||||    
T  6150815 ttaccttttttccacaacagaggagtgacaaatc 6150848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 27703695 - 27703527
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||  || ||||||||||||||||||||||||||        ||||||||||  |||||| |||||| ||||||||| ||| ||||||||    
T  27703695 aatatatatgttacttctttttctttctttagtacacgtttgagtttttt--ctagactcta--gttctcttttttgaacataaatttgatgctatcaaa 27703600  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||| ||  |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||    
T  27703599 ccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaatcacaacaatca 27703527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 29208262 - 29208036
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    ||||||||||||||||||||||||||  ||||||||||||         ||||||||||  |||||| |||||||||||||||   ||| ||||||||||    
T  29208262 atatatgttatatccttttctttcttcggtacacgtttga-atttttttctagactcta--gttctcttttttgtacataaatctaatcatatcaaacca 29208166  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     || ||||||||||||||| ||||| ||||||| || ||  |||||||||||||||||||||||||||||        |||||||||||| |||||||||    
T  29208165 cccctaatttgtataatcatttaatcagtcaatctggaagtctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgtttt 29208067  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||| |||| ||||| | ||||||||||||||    
T  29208066 acccttttccacaatagaggagtgacaaatc 29208036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 25930512 - 25930670
Alignment:
Q  25 atatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaaccatccataatt 124  Q
    |||||||||||||| ||  |||||||||||||        ||||||||||  |||||| |||||||||||||||  ||||||||||||| | || |||||    
T  25930512 atatccttttcttttttcggtacacgtttgagttttttgtctagactcta--gttctcatttttgtacataaatctgatcctatcaaactacccctaatt 25930609  T
Q  125 tgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  25930610 tgtataatcacttaatcagtcaacttgaaaagctatttcattgaaaggatcacaacaatca 25930670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 28885770 - 28885609
Alignment:
Q  84 tttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| | |||||||  ||||||||||||||| |||||||||||||||    
T  28885770 tttttgtgcataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaat 28885671  T
Q  184 cannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||        |||||||||||| |||||||||| | |||| ||||||| | ||||||||||||    
T  28885670 ca-tttttttcttcgcataaaccattcgttttatctttttccacaacagatgagtgacaaatc 28885609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 245
Target Start/End: Complemental strand, 30005006 - 30004847
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    |||||||||||||||||||||  |||||||||||||||      ||||||||||||||||||| | | |||||||||||||||||||||||||||||| |    
T  30005006 ttctcctttttgtacataaatccgatcctatcaaacca------atttgtataatcacttaatcaattaatttgaaaagctatttcattgaaagaatcgc 30004913  T
Q  178 aacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    ||||||||        |||| ||||||| |||||||||||| |||| ||||||| |||||||||||||    
T  30004912 aacaatca--tttgttcttcccataaaccattcgttttacctttttccacaacagaggagtgacaaat 30004847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 12971362 - 12971472
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||  |||  |||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  12971362 tagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatcgaaagaat 12971461  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  12971462 cacaacaatca 12971472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 8 - 133
Alignment:
Q  120 taatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttacca 219  Q
    ||||||||||||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||        |||||||||||| ||||||||||||     
T  8 taatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgttttaccc 106  T
Q  220 ttttacacaacaaaggagtgacaaatc 246  Q
    ||||  |||||| ||||||||||||||    
T  107 ttttctacaacagaggagtgacaaatc 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 50371090 - 50371200
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||| || | ||||| | ||| |||||||| || ||  |||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  50371090 tagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcattgaaagaat 50371189  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  50371190 cacaacaatca 50371200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 5560436 - 5560549
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    ||||||||||| ||| || ||||||||  | | ||| ||||||| ||  |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  5560436 ctatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaag 5560535  T
Q  172 aatcacaacaatca 185  Q
    ||||||||||||||    
T  5560536 aatcacaacaatca 5560549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 44836829 - 44836726
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  44836829 tagttctactttctgaacataaatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcactgaaagaa 44836731  T
Q  174 tcaca 178  Q
    |||||    
T  44836730 tcaca 44836726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 17674444 - 17674354
Alignment:
Q  93 ataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||| ||| |||| |||||| |||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  17674444 ataaatttgatgctattaaacca-ccatcaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 17674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 24556808 - 24556870
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  24556808 aatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaat 24556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 37873854 - 37873762
Alignment:
Q  91 acataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||| ||| ||||||||||| |||| |||||||||| ||||||||| ||| |||||||||| || ||||||||||||||||||||||||    
T  37873854 acataaatttgatgctatcaaacca-ccatcaatttgtatagtcacttaatcagttaatttgaaaaactgtttcattgaaagaatcacaacaat 37873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 42740066 - 42740174
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || |||||| || ||| ||||||||| | |||| |||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  42740066 tagttctactttctggacataagtttgatgctatcaaacaa-ccatcaatttgtataataacttaattagtcaatttgaaaaactatttcattgaaagaa 42740164  T
Q  174 tcacaacaat 183  Q
    || |||||||    
T  42740165 tcgcaacaat 42740174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 13120929 - 13120866
Alignment:
Q  120 taatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  13120929 taatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaat 13120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 6333623 - 6333514
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||| ||  |||||||||||  ||| |||||||||||||| |||| |||| ||||||||||| |||||| ||| |||| ||||| ||| |||||||    
T  6333623 tagttctcattcctgtacataaatctgatactatcaaaccatcc-taatctgtaaaatcacttaatcagtcaaattggaaagttattttattaaaagaat 6333525  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  6333524 cacaacaatca 6333514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 22386899 - 22386837
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  22386899 aatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 22386837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 20470625 - 20470668
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20470625 aatatatatgttatatccttttctttctttagtacacgtttgag 20470668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 15441246 - 15441355
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcatt-gaaagaa 173  Q
    |||||||||||| |  ||||||||   || ||||||||||| | | |||||||||||||||||||| | |||||||  ||||||||||||||  ||||||    
T  15441246 tagttctcctttctagacataaatataatgctatcaaaccacctacaatttgtataatcacttaatcactcaatttataaagctatttcattaaaaagaa 15441345  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  15441346 tcacaacaat 15441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 1269574 - 1269617
Alignment:
Q  142 agtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  1269574 agtcaatttgaaaagctatttcattaaaagaatcacaacaatca 1269617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 3907473 - 3907528
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatca 176  Q
    |||||||||||||| ||||| | ||||||||||||  |||||||||||||||||||    
T  3907473 aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 28189296 - 28189391
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||| ||||||||||| | ||||||||||||         ||||  || ||||||||||||||||||||||||  |||||||||||||    
T  28189296 atatatatgttatatcattttctttcttcaatacacgtttgagttttttt--taga--ctttagttctcctttttgtacataaatctgatcctatcaaac 28189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 32810414 - 32810370
Alignment:
Q  120 taatttgtataatcacttaataagtcaatttgaaaagctatttca 164  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||    
T  32810414 taatttgaataatcacttaatcaatcaatttgaaaagctatttca 32810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 26486473 - 26486373
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||| |||| || | ||||||| ||| |||||||||||||   |||||||||||||||||        ||| ||||||||||||||||||||| |||    
T  26486473 tagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatcactt--------aatctgaaaagctatttcattgaaaaaat 26486382  T
Q  175 cacaacaat 183  Q
    || ||||||    
T  26486381 cataacaat 26486373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 9777415 - 9777480
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttc-attgaaagaatcacaacaatca 185  Q
    ||||| |||||||||| ||| |||||||||||| | ||||||| ||  ||||||||||||||||||    
T  9777415 aatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatca 9777480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 38263879 - 38263924
Alignment:
Q  134 acttaataagtcaatttgaaaagctatttcattgaaagaatcacaa 179  Q
    ||||||| ||||||||| |||| |||||||||||| ||||||||||    
T  38263879 acttaatcagtcaatttaaaaaactatttcattgatagaatcacaa 38263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 19367586 - 19367358
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||| ||||||||    
T  19367586 aatatatatgttatatccttttctttctttagtacacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggattctatcaaa 19367490  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||| ||||||    
T  19367489 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgaataaaccattcgt 19367391  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| |||||||  ||||||||||||    
T  19367390 tttacccttttccacaacagtggagtgacaaat 19367358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 26151915 - 26151685
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||        ||||||| | |||||||||||||||||||||||| |||||||||||||    
T  26151915 aatatatatgttatatccttttctttctttagtatacgtttgagttttttt-ctagact-tctagttctcctttttgtacataaatcggatcctatcaaa 26151818  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  26151817 ccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 26151719  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| ||||  |||||| ||||||||||||||    
T  26151718 tttacccttttctacaacagaggagtgacaaatc 26151685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 42411723 - 42411496
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  42411723 atatatatgttatatccttttctttctttagtacacgtttgagtttttt--ctagactcta--gttctcctttttgtacataaatcggatcctatcaaac 42411628  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtt 213  Q
    || || ||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||        |||||||||||| |||||||    
T  42411627 cacccctaatttgtataatcacttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatca-ttttttacttcgcataaaccattcgtt 42411529  T
Q  214 ttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||| |||| ||||||| |||||||| |||||    
T  42411528 ttaccctttttcacaacagaggagtgaaaaatc 42411496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 13020319 - 13020548
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||  |||||| ||||||||||||||| |||||||||||||    
T  13020319 aatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactcta--gttctcttttttgtacataaatcggatcctatcaaa 13020416  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |        |||||||||||| ||||||    
T  13020417 ccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaat-aatttttttcttcgcataaaccattcgt 13020515  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||||| ||||    
T  13020516 tttaccttttttcacaacagaggagtgaaaaat 13020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 7993530 - 7993759
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||  |||||||||||||||||||||  |||||||||||||    
T  7993530 aatatatatgttatatccttttctttctttagtacacatttgagtttttt--ctagactcta--gttctcctttttgtacataaaccggatcctatcaaa 7993625  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||         |||||||||||| ||||||    
T  7993626 ccacccctaatttgtataatcacttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatctttttttttcttcgcataaaccattcgt 7993725  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||| | ||||||||||||||    
T  7993726 tttacccttttccacaatagaggagtgacaaatc 7993759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 18676478 - 18676249
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  18676478 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcctatcaaa 18676382  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    | | || ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||        ||| |||||||| ||||||    
T  18676381 ctacccctaatttgtataataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttctttgcataaaccattcgt 18676282  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||| | |||||||||||||    
T  18676281 tttacccttttccacaaaagaggagtgacaaat 18676249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 41096704 - 41096475
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||        ||||||||||  ||||||||||||||||||||||  ||||||||||||     
T  41096704 atatatatgttatatccttttctttctttagtacacatttgagttttttt-ctagactcta--gttctcctttttgtacataaatcagatcctatcaaat 41096608  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtt 213  Q
    || || ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||        |||||||| ||| |||||||    
T  41096607 cacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcattttttttcttcgcattaaccattcgtt 41096508  T
Q  214 ttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||| |||| ||||||| ||||||||||||||    
T  41096507 ttacccttttccacaacagaggagtgacaaatc 41096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 45618874 - 45619102
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||        ||||||| | |||||||||||||||||||||||| |||||||||||||    
T  45618874 aatatatatgttatatccttttctttctttagtatacgtttgagtttttt--ctagact-tctagttctcctttttgtacataaatcggatcctatcaaa 45618970  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||        |||||||||||| ||| ||    
T  45618971 ccacccctaatttgtataatcacttaatcagtcaatttg-gaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccatttgt 45619068  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  45619069 tttacccttttccacaacagaggagtgacaaatc 45619102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 25222220 - 25222448
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||| ||  |||||||||||||||||||||| |||||||||||||    
T  25222220 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagacttta--gttctcctttttgtacataaatcggatcctatcaaa 25222316  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
     ||| | ||||||||||||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  25222317 tcattcctaatttgtataatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 25222415  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||||||||||    
T  25222416 tttaccctttttcacaacagaggagtgacaaat 25222448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 4855887 - 4856119
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgta-cataaattggatcctatcaa 111  Q
    |||||||||||||||||| ||||||||||| |||||||||||||        ||||| | | ||||||||||||||||| |||||||  |||||||||||    
T  4855887 aatatatatgttatatccctttctttctttcgtacacgtttgagttttttttctagatttt-tagttctcctttttgtaacataaatcagatcctatcaa 4855985  T
Q  112 accatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    |||| || ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||        |||||||||||| |||||    
T  4855986 accacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcg 4856084  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||| | |||| ||||||| ||||||||||||||    
T  4856085 ttttaaccttttccacaacagaggagtgacaaatc 4856119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 6530556 - 6530781
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||| ||||||||||||||||||||||||| | |||| ||        ||||||||||  |||||| ||||||||||||||| |||| ||||||||    
T  6530556 aatatatacgttatatccttttctttctttagtagatgtttaagttttttt-ctagactcta--gttctcatttttgtacataaatcggatactatcaaa 6530652  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  6530653 ccacccctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatca-ttattttcttcgcataaaccattcgt 6530751  T
Q  213 tttaccattttacacaacaaaggagtgaca 242  Q
    |||| | | || ||||||| ||||||||||    
T  6530752 tttatcctattccacaacagaggagtgaca 6530781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 2063761 - 2063930
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||| ||||||||||||||||||   |||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  2063761 tagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaat 2063860  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||||||||        |  |||| |||| |||||||||||| |||| ||||||| |||||||||||||    
T  2063861 cacaacaatcattttttttc-ccgcaaaaaccattcgttttacctttttccacaacagaggagtgacaaat 2063930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 42759915 - 42759695
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||         |||||||||  |||||||||||||||||||||| ||||| |||||||    
T  42759915 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttt-tagactcta--gttctcctttttgtacataaatcggatcatatcaaa 42759819  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| ||||||||| |||||||        |||||||||| |||| ||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  42759818 ccacccataatttttataatc--------agtcaatttggaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 42759728  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||| | ||| |||||||||    
T  42759727 tttacccttttccacaatagaggggtgacaaat 42759695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 45042288 - 45042515
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||| ||||| ||||||||||| |||| |||||||||        ||||||||||  ||||| ||||| ||||||||||| |||||||||||||||    
T  45042288 atatatgtcatatcattttctttcttcagtatacgtttgagttttttttctagactcta--gttcttcttttcgtacataaatttgatcctatcaaacca 45042385  T
Q  116 tccataatttgtataatcacttaataagtcaatt---tgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
     || ||||||||||||||||||||| ||||||||   |||||  |||||||||||||||||||||||||||||        |||||||||||| |||||     
T  45042386 cccctaatttgtataatcacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcg- 45042483  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
     ||||| |||| ||||||| |||||||||||||    
T  45042484 -ttacccttttccacaacagaggagtgacaaat 45042515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 34061967 - 34061854
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    |||||||||| ||||||||||||||||  | ||||||||||||| ||||||||||||| || ||||||| |||||||||| |||||||||||||||||||    
T  34061967 ctatagttcttctttttgtacataaatctggtcctatcaaaccacccataatttgtatgattacttaatcagtcaatttggaaagctatttcattgaaag 34061868  T
Q  172 aatcacaacaatca 185  Q
    ||||||||||||||    
T  34061867 aatcacaacaatca 34061854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 36481303 - 36481520
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||         |||||||||   ||||||||||||||||||||||||||||| |||||    
T  36481303 aatatatatgttatatcattttctttctt-agtacacatttgagtttcttt--tagactctaa--ttctcctttttgtacataaattggatcctttcaaa 36481397  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||          || |||||||||||||||||||||||||||||||||        |||||||||||| |||| |    
T  36481398 ccacccctaatttgtataatcacttaa----------tggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcat 36481486  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  36481487 tttacccttttccacaacagaggagtgacaaatc 36481520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 39081370 - 39081462
Alignment:
Q  91 acataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||| ||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  39081370 acataaatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaat 39081462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 18173018 - 18172938
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  18173018 ctatcaaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatca 18172938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 1418866 - 1418973
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||||  |||||| ||| || ||||||||||| |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  1418866 tagttctactttttagacataatttg-atgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttgtaaagctatttcattgaaagaa 1418963  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  1418964 tcacaacaat 1418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 12269323 - 12269490
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| |||| |||||||||||||| |||||          |||||||||  |||||| |||||| ||||||||  ||||||||||||    
T  12269323 aatatatatgttatatcattttttttctttagtacacatttgaattttttt--tagactcta--gttctcttttttgcacataaatcagatcctatcaaa 12269418  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||| || ||||||||||||||||||||| |||  ||||| |||||||||||||| ||| |||||| |||||||    
T  12269419 ccacccctaatttgtataatcacttaatcagt-gatttggaaagctatttcattaaaaaaatcaccacaatca 12269490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 18916132 - 18916052
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||||||  |||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||    
T  18916132 ctatcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcacagcaatca 18916052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 36060013 - 36059903
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||||  ||| ||||| ||| ||||||||||| |||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  36060013 tagttctactttttagacaaaaatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagttaatttaaaaagctatttcattgaaagaa 36059915  T
Q  174 tcacaacaatca 185  Q
     |||||||||||    
T  36059914 ccacaacaatca 36059903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 38985814 - 38985707
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    ||||||| | || ||||||||| | | ||||||||||| |   |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  38985814 ttctcctatctggacataaatttggtactatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcac 38985715  T
Q  178 aacaatca 185  Q
    ||||||||    
T  38985714 aacaatca 38985707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 15457502 - 15457564
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  15457502 aatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaat 15457564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 13997316 - 13997378
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  13997316 aatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaatcacaacaat 13997378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 27302590 - 27302526
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||||    
T  27302590 aatttgtataatcacttaatcggtcaatttgaaaagctatatcattaaaagaatcacaacaatca 27302526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 21747308 - 21747230
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||| ||  |||||||||||||||||||| ||||||||| |||  |||| ||||||||||||||||||||||    
T  21747308 ctatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcattgaaagaatcacaacaat 21747230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 38599404 - 38599466
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||    
T  38599404 aatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaat 38599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 17117691 - 17117643
Alignment:
Q  137 taataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 17117643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 29480729 - 29480637
Alignment:
Q  91 acataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||| ||| |||| |||||| |||| |||||| |||| |||||| | ||||||||||||||  ||||||||||||||||||||||||||    
T  29480729 acataaatttgatgctattaaacca-ccatcaatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaat 29480637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 13001604 - 13001703
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    ||||||||||| |||||||||| ||| ||||||||||| ||  ||||||||        |||| |||||||||  |||||||||||||| ||||||||||    
T  13001604 ttctcctttttatacataaatttgatgctatcaaaccacccccaatttgta--------taattagtcaatttataaagctatttcattaaaagaatcac 13001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 31273269 - 31273168
Alignment:
Q  79 tctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcaca 178  Q
    |||||||| || || |||||| |||  |||||||||| ||  |||||||||||||| ||||| |||||||||| ||  |||||||||| ||||||||| |    
T  31273269 tctcctttctggacttaaatttgatgttatcaaaccacccc-aatttgtataatcatttaatcagtcaatttggaatactatttcattaaaagaatcata 31273171  T
Q  179 aca 181  Q
    |||    
T  31273170 aca 31273168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 18482599 - 18482506
Alignment:
Q  91 acataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttga-aaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||| ||| ||| ||||| | ||  ||||||||||||| |||||| ||||||||| | | || ||||||||||||||||| ||||||||    
T  18482599 acataaatttgatgctaacaaactacccccaatttgtataatcgcttaatcagtcaatttaacacagttatttcattgaaagaataacaacaat 18482506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 1226364 - 1226264
Alignment:
Q  86 tttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttc-attgaaagaatcacaacaatc 184  Q
    |||| ||||||||  ||| ||| ||||||| ||  ||||| |||||||||| ||| || |||||||||||| |||||| ||  |||||||||||||||||    
T  1226364 tttggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaatcagacaatttgaaaagttatttcaataaaaagaatcacaacaatc 1226265  T
Q  185 a 185  Q
    |    
T  1226264 a 1226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 12072456 - 12072558
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||||||||||| |||  ||||  ||  ||||||||||| ||  |||| |||||||||||||| | ||||||| ||||| ||||||    |||||||    
T  12072456 tagttctcctttttggacaagaattcaatgttatcaaaccattca--atttatataatcacttaatcaatcaatttaaaaagttatttc----aaagaat 12072549  T
Q  175 cacaacaat 183  Q
    |||||||||    
T  12072550 cacaacaat 12072558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 19661277 - 19661505
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||  |||||| ||||||||||||||| |||||||||||||    
T  19661277 aatatatatgttatatccttttctttctttagtacacgtttgagtttttt--ctagactcta--gttctcatttttgtacataaatcggatcctatcaaa 19661372  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||         ||| |||||||| ||||||    
T  19661373 ccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatc-ctttttttctttgcataaaccattcgt 19661471  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||||||||||||||||||    
T  19661472 tttacccttttccacaacaaaggagtgacaaatc 19661505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 23426332 - 23426104
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    ||||||||||||||| ||||||||||||||||| |||||||||        ||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  23426332 atatatatgttatatacttttctttctttagtatacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcctatcaaac 23426236  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtt 213  Q
    || |  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||        |||||||||||| |||||||    
T  23426235 cacctctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgtt 23426137  T
Q  214 ttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||| |||| ||||||| ||||||||||||||    
T  23426136 ttacccttttccacaacagaggagtgacaaatc 23426104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 32130956 - 32130729
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||        |||||| |||  ||||| |||||||||||||||| |||||||||||||    
T  32130956 aatatatatgttatatcattttctttctttagtacccgtttgagtttttt--ctagacacta--gttcttctttttgtacataaatcggatcctatcaaa 32130861  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  32130860 ccacccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 32130762  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||||||||||    
T  32130761 tttacccttttccacaacagaggagtgacaaat 32130729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 44477935 - 44478165
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| |||| |||||||||||||||||||||        ||| ||| | ||||| || |||||||||||||||  ||||||||||||    
T  44477935 aatatatatgttatatcattttatttctttagtacacgtttgagttttttt-ctaaact-tctagttatcatttttgtacataaatcagatcctatcaaa 44478032  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  44478033 ccacccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaactattcgt 44478132  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||||||||||    
T  44478133 tttacccttttccacaacagaggagtgacaaat 44478165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 28463755 - 28463527
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||        ||||||||||  |||||||||||||||||||||| ||||| |||||||    
T  28463755 aatatatatgttatatccttttctttctttagtaaacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcttatcaaa 28463659  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||        |||||||||||| ||||||    
T  28463658 ccacccctaatttgtataatcacttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatca-tttttttcttcgcataaaccattcgt 28463560  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    ||| || |||| ||||| | |||||||||||||    
T  28463559 tttgcccttttccacaatagaggagtgacaaat 28463527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 53011613 - 53011838
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||| ||||||||||||||||||||||||||        ||| ||||||   |||||||||||||||||||||  |||||||||||||||    
T  53011613 atatatgttatatcattttctttctttagtacacgtttgagtttttt--ctaaactctaa--ttctcctttttgtacataaatcagatcctatcaaacca 53011708  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     || ||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||        |||||||||||| |||| ||||    
T  53011709 cccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatca-tttttttcttcgcataaaccattcatttt 53011807  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||| |||| ||||||| ||||||||||||||    
T  53011808 acccttttccacaacagaggagtgacaaatc 53011838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 23256493 - 23256718
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||         ||||||| |  |||||||||||||||||||||| |||||||||||||    
T  23256493 aatatatatgttatatccttttctttctt-agtacacatttgagttttttt--tagactcca--gttctcctttttgtacataaatcggatcctatcaaa 23256587  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || |||||||||||| |||||||| |||||||||  |||||||||||| ||||||||||||||||||||        |||| ||||||| ||||||    
T  23256588 ccacccctaatttgtataaccacttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatca--ttttttcttcccataaaccattcgt 23256685  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||||||||||    
T  23256686 tttacccttttccacaacagaggagtgacaaat 23256718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 27632300 - 27632524
Alignment:
Q  18 atatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaaccatc 117  Q
    |||||||||||  ||||||||||| ||||||||||||||        ||||| ||||  ||||||||||||||||||||||| ||||||||||||||| |    
T  27632300 atatgttatataattttctttcttcagtacacgtttgagttttttt-ctagattcta--gttctcctttttgtacataaatttgatcctatcaaaccacc 27632396  T
Q  118 cataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttac 217  Q
    | ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||        |||||||||||  ||||| |||||    
T  27632397 cctaatttgtataatcacttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatca-tttttttcttcgcataaatcattcgctttac 27632495  T
Q  218 cattttacacaacaaaggagtgacaaatc 246  Q
    | |||| ||||||| || |||||||||||    
T  27632496 ccttttccacaacagagtagtgacaaatc 27632524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 11681910 - 11681680
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgt-acataaattggatcctatcaa 111  Q
    ||||||||| |||||| |||||||||||||||||||||||||||        ||||||||||  |||||||||||| | |||||||| ||||||||||||    
T  11681910 aatatatatattatattcttttctttctttagtacacgtttgagttttttt-ctagactcta--gttctccttttttttacataaatcggatcctatcaa 11681814  T
Q  112 accatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    |||| || |||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||        ||||| |||||| || ||    
T  11681813 accacccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgaataaaccatccg 11681715  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||| |||| ||||||| | ||||||||||||    
T  11681714 ttttacccttttccacaacagatgagtgacaaatc 11681680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 11690189 - 11689959
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgt-acataaattggatcctatcaa 111  Q
    ||||||||| |||||| |||||||||||||||||||||||||||        ||||||||||  |||||||||||| | |||||||| ||||||||||||    
T  11690189 aatatatatattatattcttttctttctttagtacacgtttgagttttttt-ctagactcta--gttctccttttttttacataaatcggatcctatcaa 11690093  T
Q  112 accatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    |||| || |||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||        ||||| |||||| || ||    
T  11690092 accacccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgaataaaccatccg 11689994  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||| |||| ||||||| | ||||||||||||    
T  11689993 ttttacccttttccacaacagatgagtgacaaatc 11689959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 29579836 - 29580006
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||  |||||||||||||||  ||||||||||||||| |||||||||||||||| | ||||| |||||| |||||||||||||||| |||||||||    
T  29579836 tagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaatgaaagaat 29579935  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||||||        |||||||||||| ||||||||||||||||| ||||||| || |||||||||||    
T  29579936 cacaacaatca-tttttttcttcgcataaacaattcgttttaccattttccacaacagagtagtgacaaatc 29580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 41038215 - 41038376
Alignment:
Q  84 tttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||||||| | ||||||||||| || || ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  41038215 tttttgtacataaatcgaatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaat 41038314  T
Q  184 cannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||        |||||||||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  41038315 ca-tttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatc 41038376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 16072554 - 16072722
Alignment:
Q  79 tctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcatt----gaaagaat 174  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||| |    ||||||||    
T  16072554 tctcctttttgtacataaatttgatcctatcaaaccatccctaatttgtataatcatttaatcagtcaatttgaaaaactatttcaatgaaagaaagaat 16072653  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaa 244  Q
    |||||||||||        |||||||||||||||| |||||||| |||| ||||||| ||||||||||||    
T  16072654 cacaacaatca-tttttttcttcgcataaactatttgttttacccttttccacaacagaggagtgacaaa 16072722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 29221788 - 29221555
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||| | | ||||||||||        ||||||||||   ||||| |||||||||||||||  ||||||||||||    
T  29221788 aatatatatgttatatccttttctttcttcatttcacgtttgagttttttt-ctagactctaa--ttctcgtttttgtacataaatctgatcctatcaaa 29221692  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    |||  | ||||||||||||||||||||   ||||||||| ||  ||||||||||||| |||||||||||||||        |||||||||||| ||||||    
T  29221691 ccactcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatca-tttttttcttcgcataaaccattcgt 29221593  T
Q  213 tttaccattttacacaacaaaggagtgacaaatctaaa 250  Q
    |||||| |||| ||||||| ||||||||||||| ||||    
T  29221592 tttacccttttccacaacagaggagtgacaaatttaaa 29221555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 21168954 - 21169088
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||| |||||||||||||| |||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  21168954 aatatatatgttataaccttttctttcttttgtacacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcctatcaaa 21169050  T
Q  113 ccatccataatttgtataatcacttaataagtcaattt 150  Q
     || || ||||||||||||||| ||||| |||||||||    
T  21169051 tcacccctaatttgtataatcaattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 21791655 - 21791545
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||| || ||||||||| ||| | ||||||||| |   ||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  21791655 tagttctcctttctgaacataaatttgatgccatcaaaccaccttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaat 21791556  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  21791555 cacaacaatca 21791545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 35654088 - 35653980
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||  ||| ||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  35654088 tagttctactttctggacataaatatgatgctatcaaacca-ccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaa 35653990  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  35653989 tcacaacaat 35653980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 43154896 - 43154788
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||||| ||||||||| ||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||    
T  43154896 tagttctactttttggacataaatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattaaaagaa 43154798  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  43154797 tcacaacaat 43154788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 45172722 - 45172643
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  45172722 ctatcaaaccaccc-taatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatca 45172643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 5545301 - 5545395
Alignment:
Q  91 acataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||| ||| | ||||||||| |   ||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||    
T  5545301 acataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcattaaaagaatcacaacaatca 5545395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 34982214 - 34982288
Alignment:
Q  109 caaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||  |||||||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||||    
T  34982214 caaaccatccccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttgaaagaatcacaacaat 34982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 22423640 - 22423748
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| ||||||||||| |||| ||||||||| |||||||||| | |||||||||||| |||||| ||||||||||    
T  22423640 tagttctactttctggacataaatttgatgctatcaaacca-ccatcaatttgtatgatcacttaatcaatcaatttgaaaaactattttattgaaagaa 22423738  T
Q  174 tcacaacaat 183  Q
    ||| ||||||    
T  22423739 tcaaaacaat 22423748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 55134210 - 55134274
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  55134210 aattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatca 55134274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 10575615 - 10575521
Alignment:
Q  91 acataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||  || ||||||||||| ||  || ||||||||||||||||| |||||||||  |||| ||||||||||||| ||||||||||||||    
T  10575615 acataaattttatgctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatca 10575521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 24449128 - 24449190
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| | ||||||| |||||||||    
T  24449128 aatttgtataatcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 24449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 48512385 - 48512345
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  48512385 atatatgttatttctttttctttctttagtacacgtttgag 48512345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 51939722 - 51939493
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||  |||||| |||||||||||||||  ||||||||||||    
T  51939722 aatatatatgttatatccttttctttctttagtccacgtttgagtttttt--ctagactcta--gttctcttttttgtacataaatcagatcctatcaaa 51939627  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||| ||||||    
T  51939626 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcacataaaccattcgt 51939527  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| || |||||||||||    
T  51939526 tttacccttttccacaacatagaagtgacaaatc 51939493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 8364069 - 8364299
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||        |||||||||   |||||||||||||||||||||| |||||||||||||    
T  8364069 aatatatatgttatatccttttctttctttagtacacgtttgagttttttt-ctagactctt--gttctcctttttgtacataaatcggatcctatcaaa 8364165  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||        ||||||| |||| ||| ||    
T  8364166 ccacccctaatttgtataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcattttttttcttcgcacaaaccatttgt 8364265  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||| ||||||||    
T  8364266 tttacccttttccacaacagaggagagacaaatc 8364299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 21784950 - 21784721
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||   ||| |||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  21784950 aatatatatgttatataactttatttctttagtacacgtttgagtttttt--ctagactcta--gttctcctttttgtacataaatcggatcctatcaaa 21784855  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  21784854 ccacccctaatttgtataatcacttaatcagttaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgt 21784755  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  21784754 tttacccttttccacaacagaggagtgacaaatc 21784721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 28132902 - 28132677
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||        ||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  28132902 aatatatatgttatatcattttctttctttagtacacatttgagatttttt-ctagactcta--gttctcctttttgtacataaatcagatcctatcaaa 28132806  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
     || || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  28132805 tcacccttaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca--ttttttcttcgcataaaccattcgt 28132708  T
Q  213 tttaccattttacacaacaaaggagtgacaa 243  Q
    ||||||||||| ||||||| |||||||||||    
T  28132707 tttaccattttccacaacagaggagtgacaa 28132677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 41707222 - 41706990
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  41707222 aatatatatgttatatctttttctttctttagtacacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcctatcaaa 41707126  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca--nnnnnnnncttcgcataaactattc 210  Q
    ||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||    
T  41707125 ccacccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttttcttcgcataaaccattc 41707026  T
Q  211 gttttaccattttacacaacaaaggagtgacaaatc 246  Q
    | |||||| |||| |||| || ||||||||||||||    
T  41707025 gctttaccctttttcacaccagaggagtgacaaatc 41706990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 29387921 - 29387692
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||         |||||||||  |||||||||||||||||||||| |||||||||||||    
T  29387921 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttt-tagactcta--gttctcctttttgtacataaatcggatcctatcaaa 29387825  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  29387824 ccacccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 29387726  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| ||||  |||| | ||||||||||||||    
T  29387725 tttacccttttctacaatagaggagtgacaaatc 29387692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 18408089 - 18408317
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||| ||  |||||| ||||||||||||||| |||||||||||||    
T  18408089 aatatatatgttatatcattttctttctttagtacacgtttgagtttttt--ctagacttta--gttctcatttttgtacataaatcggatcctatcaaa 18408184  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||         ||||||||||| ||||||    
T  18408185 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcatttttttt-ttcgcataaacaattcgt 18408283  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| || |||||||||||    
T  18408284 tttacccttttccacaacagagcagtgacaaatc 18408317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 52655292 - 52655062
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacac--gtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatca 110  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||        ||||||||||  ||||||||||||||| |||||| |||||||||||    
T  52655292 aatatatatgttatatcattttctttctttagtacacacgtttgagtttttct-ctagactcta--gttctcctttttgtatataaatcggatcctatca 52655196  T
Q  111 aaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattc 210  Q
    ||||| |  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||        | |||||||||| ||||    
T  52655195 aaccaccactaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcc-tcgcataaaccattc 52655097  T
Q  211 gttttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||||| |||| ||||||| |||||||||||||    
T  52655096 gttttacccttttccacaacataggagtgacaaat 52655062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 23164735 - 23164510
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    ||||||||||||||||||||||| || ||||||||||||||        ||||||||||  ||||||||||||||||||||||  |||||||||||||||    
T  23164735 atatatgttatatccttttcttttttcagtacacgtttgagtttttt--ctagactcta--gttctcctttttgtacataaatctgatcctatcaaacca 23164640  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     || ||||||||||||||||||||| | |||||||| ||  ||||||||||||||||||||||||||| |        |||||||||||| |||||||||    
T  23164639 cccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaat-aatttttttcttcgcataaaccattcgtttt 23164541  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||| |||| ||||||| ||||||||||||||    
T  23164540 acctttttccacaacagaggagtgacaaatc 23164510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 46791864 - 46791635
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||| | ||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  46791864 aatatatatgttataacattttctttctttagtacacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcctatcaaa 46791768  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| |  ||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||        |||||||||||| ||||      
T  46791767 ccacctctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatca-tttttttcttcgcataaaccattcac 46791669  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    || ||| |||| ||||||| ||||||||||||||    
T  46791668 ttgacccttttccacaacagaggagtgacaaatc 46791635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 245
Target Start/End: Complemental strand, 25599249 - 25599026
Alignment:
Q  18 atatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaaccatc 117  Q
    ||||||||||| |||||||||||| |||||| |||||||         |||||||||  ||||||||||||||||||||||  ||| ||||||||||| |    
T  25599249 atatgttatattcttttctttcttcagtacaggtttgagttttttttttagactcta--gttctcctttttgtacataaatctgattctatcaaaccacc 25599152  T
Q  118 cataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttac 217  Q
      |||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||        |||||||||||| |||||||||||    
T  25599151 tctaatttatataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatca--tgttttcttcgcataaaccattcgttttac 25599054  T
Q  218 cattttacacaacaaaggagtgacaaat 245  Q
    | |||| ||||||| |||||||||||||    
T  25599053 ccttttccacaacagaggagtgacaaat 25599026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 23067892 - 23067662
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||        ||||||| ||  |||||||||||||||||||||| ||||||||||||||    
T  23067892 atatatatgttatatcattttctttctttagtacacgtttgagttttttttctagacttta--gttctcctttttgtacataaatcggatcctatcaaac 23067795  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcaca-acaatcannnnnnnncttcgcataaactattcgt 212  Q
    || || |||||||||||||||||| |  ||||||||||||||| ||||||||| ||||||||||| |||||||         ||||||||||| ||| ||    
T  23067794 cacccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcacacacaatcattttttaa-ttcgcataaaccatttgt 23067696  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| |||||||| |||||    
T  23067695 tttacccttttccacaacagaggagtgaaaaatc 23067662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 24252516 - 24252746
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnn-ctagactctatagttctcctttttgtacataaattggatcctatcaa 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||         ||||||||||  ||||| |||||||||||||| |  |||||||||||    
T  24252516 aatatatatgttatatctttttctttctttagtacacgtttgagtttttttttctagactcta--gttcttctttttgtacataa-tcagatcctatcaa 24252612  T
Q  112 accatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    |||| || ||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||        |||||||||||| |||||    
T  24252613 accacccttaatttgtataatcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatca-tttttttcttcgcataaaccattcg 24252711  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||| |||| ||||||| | ||||||||||||    
T  24252712 ttttacccttttccacaacagatgagtgacaaatc 24252746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 27729936 - 27729707
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||         |||||||||  |||||||||||||||||||||| ||||| |||||||    
T  27729936 aatatatatgttatatcattttctttcattagtacacgtttgagtttttttg-tagactcta--gttctcctttttgtacataaatcggatcttatcaaa 27729840  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || |||||||||||||||| |||| | |||||||| ||||| |||| || |||||||||||||||||||        |||||||||||| ||||||    
T  27729839 ccacccctaatttgtataatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatca-ttattttcttcgcataaaccattcgt 27729741  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| || |||||||||||    
T  27729740 tttaccctttttcacaacatagaagtgacaaatc 27729707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 13401415 - 13401525
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||||||||||||||||| ||| |||||||||||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  13401415 tagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattggaagaat 13401514  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  13401515 cacaacaatca 13401525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 54430508 - 54430678
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||||||||||||||||||||  |||  |||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  54430508 tagttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattaaaagaat 54430607  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
      |||||||||        |||||||||||| |||||||||||| |||| ||||||||| ||||||||||||    
T  54430608 tgcaacaatca-tttttttcttcgcataaaccattcgttttacccttttccacaacaaacgagtgacaaatc 54430678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 7767020 - 7767127
Alignment:
Q  76 agttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||| |||| || ||||||||| ||| ||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7767020 agttctactttctggacataaatttgatgctatcaaacaa-ccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaat 7767118  T
Q  175 cacaacaat 183  Q
    |||||||||    
T  7767119 cacaacaat 7767127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 42009370 - 42009262
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  42009370 tagttctactttctggacataaatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaa 42009272  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  42009271 tcacaacaat 42009262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 36538278 - 36538186
Alignment:
Q  91 acataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||| | ||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  36538278 acataaacttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 36538186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 27303189 - 27303251
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  27303189 aatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaat 27303251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 46904714 - 46904806
Alignment:
Q  91 acataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||| ||| ||| ||||||||||| |||| |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  46904714 acatagatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaat 46904806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 48627091 - 48627027
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  48627091 aatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatca 48627027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 21596294 - 21596401
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    ||||||||| || ||||||||  ||| |||||||||||  |  |||||||||||||||||||| |||| ||||| ||||||||||||||  |||||||||    
T  21596294 ttctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcattacaagaatcac 21596393  T
Q  178 aacaatca 185  Q
    ||||||||    
T  21596394 aacaatca 21596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 50677376 - 50677314
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  50677376 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaat 50677314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 19965985 - 19965884
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    |||||||||||| ||||||||  ||| |||||||||||     |||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||    
T  19965985 ttctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaagaatcac 19965886  T
Q  178 aa 179  Q
    ||    
T  19965885 aa 19965884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 6715405 - 6715565
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||||||||||||| |||||| |||||||||||||||| | ||||||||          |||| |||||||||  |||| |||||||||||||||||    
T  6715405 tagttctcctttttgtatataaatcggatcctatcaaaccacctataatttg----------taatcagtcaattttgaaagttatttcattgaaagaat 6715494  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgtttta-ccattttacacaacaaaggagtgacaaatc 246  Q
    || ||||||||         ||||||||||| |||||||||| || |||| ||||||| ||||||||||||||    
T  6715495 cataacaatcattttttt--ttcgcataaaccattcgttttaccctttttccacaacagaggagtgacaaatc 6715565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 1255161 - 1255057
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    |||||||||| ||||||| ||||||||  ||| ||||||||| | |  ||||||||||||| |||||||  ||||||||  |||| ||||||||||||||    
T  1255161 ctatagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaag 1255062  T
Q  172 aatca 176  Q
    |||||    
T  1255061 aatca 1255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 20762052 - 20762174
Alignment:
Q  122 atttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttaccatt 221  Q
    |||||||||||||||| || ||| |||||| ||  |||||||||||||||||||| ||||||||        | |||||||||| |||||||||||| ||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatca-tttttttcgtcgcataaaccattcgttttaccctt 20762150  T
Q  222 ttacacaacaaaggagtgacaaat 245  Q
    || ||||| | |||||||||||||    
T  20762151 ttccacaatagaggagtgacaaat 20762174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 4207460 - 4207357
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||||||||||| |||  ||||  || |||||||||||||||  ||||||||||||||||||| | |||||||| |||| ||||||    |||||||    
T  4207460 tagttctcctttttggacaagaattcaatgctatcaaaccatcca--atttgtataatcacttaatcattcaatttggaaagatatttc----aaagaat 4207367  T
Q  175 cacaacaatc 184  Q
    ||||||||||    
T  4207366 cacaacaatc 4207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 40152192 - 40152127
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaa-gaatcacaacaatca 185  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||| ||| |||||||||||||||    
T  40152192 aatttgtataatcacttaatcggtcaatttgaaaaactatttcattaaaacgaatcacaacaatca 40152127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 51146902 - 51147001
Alignment:
Q  83 ctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaaca 181  Q
    ||||||| ||||||||| ||| |||| |||||| |||| |||||| ||| ||||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  51146902 ctttttggacataaatttgatgctattaaacca-ccatcaatttgaata-tcacttaatcagtcaatttaaaaaactattttattgaaagaatcacaaca 51146999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 27110974 - 27110931
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  27110974 aatatatatgttatatctttttctttctttagtacacgtttgag 27110931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 1649893 - 1649829
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||||||||||| | |||||||||||| |||||||| ||||||  || |||||||||    
T  1649893 aatttgtataatcacttaatcattcaatttgaaaatctatttcactgaaagcttcgcaacaatca 1649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 27110862 - 27110811
Alignment:
Q  194 cttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||||||||| |||||||||||| |||| ||||||| |||||||||||||    
T  27110862 cttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaat 27110811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 43905951 - 43905862
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttca 164  Q
    |||||||||| | || ||||||||  | | ||||||||| | ||  |||||||||||||||| ||| ||||||||||||||| |||||||    
T  43905951 tagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatttca 43905862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 2618253 - 2618481
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||| ||  |||||| ||||||||||||||| |||||||||||||    
T  2618253 aatatatatgttatatcattttctttctttagtacacgtttgagtttttt--ctagacttta--gttctcttttttgtacataaatcggatcctatcaaa 2618348  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |        |||||||||||| ||||||    
T  2618349 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatta-tttttttcttcgcataaaccattcgt 2618447  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  2618448 tttacccttttccacaacagaggagtgacaaatc 2618481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 6754104 - 6754332
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||        ||||| ||||  |||||| ||||||||||||||| |||||||||||||    
T  6754104 aatatatatgttatatcattttctttctttagtacgcgtttgagtttttt--ctagattcta--gttctcttttttgtacataaatcggatcctatcaaa 6754199  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    |||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  6754200 ccatccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 6754298  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  6754299 tttacccttttccacaacagaggagtgacaaatc 6754332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 12614881 - 12614655
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||         |||||||||  |||||||||||||||||||||| |||||||||||||    
T  12614881 aatatatatgttatatccttttcttt-tttagtacacgtttgagttttttt--tagactcta--gttctcctttttgtacataaatcggatcctatcaaa 12614787  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| || |||    
T  12614786 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccatccgt 12614688  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||| ||||||    
T  12614687 tttacccttttccacaacagaggagtaacaaat 12614655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 6360658 - 6360884
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||  |||||| |||||| |||||||| |||||||||||||    
T  6360658 aatatatatgttatatcattttctttctttagtacacgtttgagtttttt--ctagactcta--gttctcttttttgcacataaatcggatcctatcaaa 6360753  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||        ||||| |||||| ||||||    
T  6360754 ccacccttaatttgtataatcacttaatcagtcaatttgaaaagtta-ttcattgaaagaatcacaacaatca-tttttttcttcgtataaaccattcgt 6360851  T
Q  213 tttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||||||||||||    
T  6360852 tttacccttttccacaacagaggagtgacaaat 6360884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 3515017 - 3514788
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||| ||||||  ||||||||||||||||||||||  ||||||||||||    
T  3515017 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctaaactcta--gttctcctttttgtacataaatcagatcctatcaaa 3514921  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || |||||||||||||||| |||| | |||||||| |||||||| ||||||||||||||||||||||||        |||||||||||| ||||||    
T  3514920 ccacccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 3514822  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| |||||||| |||||    
T  3514821 tttacccttttccacaacagaggagtgaaaaatc 3514788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 57586 - 57814
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||| |||||||||||  |||||||||||||         || ||||||  ||||||||||||||||||||||  |||||||||||||    
T  57586 atatatatgttatatcattttctttcttcggtacacgtttgagtttttttt-taaactcta--gttctcctttttgtacataaatctgatcctatcaaac 57682  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtt 213  Q
    || |||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||        |||||||||||| |||||||    
T  57683 cacccataatttgtataatcacttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatca-tttttttcttcgcataaaccattcgtt 57781  T
Q  214 ttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||| |||| ||||| | ||||||||||||||    
T  57782 ttacccttttccacaatagaggagtgacaaatc 57814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 29149359 - 29149529
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||| || ||||||||||||||    
T  29149359 tagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataatcacttaatcagtcaatttggaaagttagttcattgaaagaat 29149458  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||||||        |||||||||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  29149459 cacaacaatca-tttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatc 29149529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 7525330 - 7525104
Alignment:
Q  17 tatatgttatatccttttcttt-ctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    ||||| |||||||||||| ||| ||||||||||||||||||        ||||||||||  ||||||| |||||||||||||| ||||||||||||||||    
T  7525330 tatatattatatcctttttttttctttagtacacgtttgagttttttt-ctagactcta--gttctccattttgtacataaatcggatcctatcaaacca 7525234  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     |||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||        |||||||||||| |||  ||||    
T  7525233 cccataatttgtataatcacttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatca-tttttttcttcgcataaacaatttatttt 7525135  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||| |||| ||||||| ||||||||||||||    
T  7525134 acccttttccacaacagaggagtgacaaatc 7525104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 29401037 - 29401266
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||        || |||||||  ||| || ||||||||||||||| | |||||||||||    
T  29401037 aatatatatgtcatatcattttctttctttagtacacgtttgagttttttt-cttgactcta--gttttcatttttgtacataaatcgaatcctatcaaa 29401133  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    | | || ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  29401134 ctacccctaattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 29401232  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
     ||||| |||| ||| ||| ||||||||||||||    
T  29401233 cttacccttttccacgacagaggagtgacaaatc 29401266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 628254 - 628093
Alignment:
Q  22 gttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaaccatccata 121  Q
    |||||||||| |||||||||||||||| ||||||         ||||||||||  |||| |||||||||||| ||||  |||| |||||||||| || ||    
T  628254 gttatatcctcttctttctttagtacatgtttgattttcttttctagactcta--gttcacctttttgtacacaaatcagatcttatcaaaccaccccta 628157  T
Q  122 atttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  628156 atttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 628093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 3748676 - 3748568
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||||| ||||||||| ||| ||||||||||  |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  3748676 tagttctactttttggacataaatttgatgctatcaaaccg-ccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaa 3748578  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  3748577 tcacaacaat 3748568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 30915474 - 30915364
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| ||||||||||  |||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  30915474 tagttctactttctggacataaatttgatgctatcaaaccc-ccatcaatttgtataattacttaatcagtcaatttgaaaagctatttaattgaaagaa 30915376  T
Q  174 tcacaacaatca 185  Q
    ||||||||||||    
T  30915375 tcacaacaatca 30915364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 31861003 - 31861067
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31861003 aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 31861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 1690741 - 1690631
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| |||| ||||||||  | | ||||||||||| |   ||||||||||||||||| || | ||||||||||||  |||||||||||||||||    
T  1690741 tagttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaat 1690642  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  1690641 cacaacaatca 1690631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 21946109 - 21946171
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaat 21946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 245
Target Start/End: Original strand, 22503727 - 22503868
Alignment:
Q  100 ggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgc 199  Q
    ||||||||||||||||  |||||||   ||||||||||||| |||||||||||||| ||||||| |||||||||| | ||||||||        |||||     
T  22503727 ggatcctatcaaaccactcataatt---ataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatca-tttttttcttcgt 22503822  T
Q  200 ataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||| |||| ||||||| |||| ||||||| || ||||||||||    
T  22503823 ataaaccattcattttacccttttccacaacagagaagtgacaaat 22503868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 14893479 - 14893415
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||| ||||||| |||||||||||||| ||||||| || ||||||||||||||||||    
T  14893479 aatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatca 14893415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 31258624 - 31258581
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31258624 aatatatatgttatatccttttctttctttagtacacgtttgag 31258581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 29308529 - 29308465
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||| ||||||| ||||||| |||||||||||||| |||||||||||||  ||||||||||||||    
T  29308529 aattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatca 29308465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 31234899 - 31234956
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttca 164  Q
    |||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||    
T  31234899 ctatcaaaccatcca--atttgtataatcacttaatcaatcaatttgaaaagctatttca 31234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 1093148 - 1093039
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||| | | |||||||||||     |||| ||||||| ||| ||| ||||||||| ||||||||||||| |||||||||    
T  1093148 tagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatcagtcaatttaaaaagctatttca-tgaaagaat 1093050  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  1093049 cacaacaatca 1093039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 6294279 - 6294320
Alignment:
Q  144 tcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatca 6294320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 19231615 - 19231678
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||| ||||||||| | |||||||||||||||||  |||||||| ||||||||||||||    
T  19231615 aatttgtata-tcacttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatca 19231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 350381 - 350481
Alignment:
Q  86 tttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttc-attgaaagaatcacaacaat 183  Q
    |||| ||||||||  ||| ||||||||||| |||| ||||| |||||||||| ||| |||||||||  ||||||||||| ||  ||||||||||||||||    
T  350381 tttggacataaatatgatgctatcaaacca-ccatcaatttatataatcactcaatcagtcaatttcgaaagctatttcaataaaaagaatcacaacaat 350479  T
Q  184 ca 185  Q
    ||    
T  350480 ca 350481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 31244036 - 31244092
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttca 164  Q
    |||||||||||||||  ||||||||||||||||||| | |||| ||||||||||||||||    
T  31244036 ctatcaaaccatcca--atttgtataatcacttaatcaatcaa-ttgaaaagctatttca 31244092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 15035887 - 15035805
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagct 158  Q
    ||||||||||||||| |||  ||||  || |||||||||||| || | |||||||||||| ||||  |||||||||||||||||    
T  15035887 tagttctcctttttggacaagaattcaatgctatcaaaccattca-attttgtataatcatttaaccagtcaatttgaaaagct 15035805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 11088564 - 11088613
Alignment:
Q  137 taataagtcaatttgaaaagctatttc-attgaaagaatcacaacaatca 185  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||||||||    
T  11088564 taatcagtcaatttgaaaagctatttcaataaaaagaatcacaacaatca 11088613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 24455175 - 24455215
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||| || |||||| ||||||||||||||||    
T  24455175 tagttctcctttttatatataaatcggatcctatcaaacca 24455215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 26377942 - 26377711
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||  ||||||||||||||||||||||||||        ||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  26377942 aatatatatgttatatttttttctttctttagtacacgtttgagttttttttctagactcta--gttctcctttttgtacataaatcagatcctatcaaa 26377845  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  26377844 ccacccctaatttgtataatcacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcatttttttccttcgcataaaccattcgt 26377745  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||  ||||||||||||||    
T  26377744 tttaccttttttcacaactgaggagtgacaaatc 26377711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 13474527 - 13474756
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||        ||| ||||||  |||||| ||||||||||||||| |||||||||||||    
T  13474527 aatatatatattatatcattttttttctttagtacacgtttgagttttttt-ctaaactcta--gttctcttttttgtacataaatcggatcctatcaaa 13474623  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||        |||||||||||| ||||||    
T  13474624 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 13474722  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  13474723 tttacccttttccacaacagaggagtgacaaatc 13474756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 13423758 - 13423994
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||||||||||||||||||| |||||| ||||         |  |  || |||||||| ||||||||||||||| |||||||||||||    
T  13423758 aatatatatgttatatccttttctttctttagcacacgtatgagttttttttttttagactctagttctcttttttgtacataaatcggatcctatcaaa 13423857  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    |||| | ||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  13423858 ccattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 13423956  T
Q  213 tttaccattttacacaacaaaggagtgacaaatctaaa 250  Q
    |||||| |||| ||||| | ||||||||||||||||||    
T  13423957 tttacccttttccacaatagaggagtgacaaatctaaa 13423994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 13656105 - 13656335
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcct---atc 109  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| |||||||   |      
T  13656105 aatatatatgttatatcattttctttctttagtacacgtttgagtttttt--ctagactcta--gttctcctttttgtacataaatcggatcctaaaaaa 13656200  T
Q  110 aaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactatt 209  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||        |||||||||||| |||    
T  13656201 aaaccatccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccatt 13656299  T
Q  210 cgttttaccattttacacaacaaaggagtgacaaat 245  Q
    ||||||||| ||||  |||||| ||||||| |||||    
T  13656300 cgttttacccttttctacaacagaggagtgtcaaat 13656335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 19099425 - 19099252
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  19099425 ctatagttctcctttttgtacataaatctgatcctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaag 19099326  T
Q  172 aatcacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||||||||||        |||||||||||| |||||||||| || ||| ||||||  || |||||||||||    
T  19099325 aatcacaacaatca-tttttttcttcgcataaaccattcgttttatcactttccacaaccgagaagtgacaaatc 19099252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 36718735 - 36718527
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||        ||||||||||  |||||||||||||||||| ||| |||||||||||||    
T  36718735 aatatatatgttatattcttttctttttttagtacacgtgtgagttttttttctagactcta--gttctcctttttgtacatgaatcggatcctatcaaa 36718638  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    ||| || ||||||||||||||| ||||| |||||||||| |||| ||||| ||||||||||||||||| || |        |||||||||||| ||||||    
T  36718637 ccacccctaatttgtataatcatttaatcagtcaatttgtaaagttattttattgaaagaatcacaaccataattttttttcttcgcataaaccattcgt 36718538  T
Q  213 tttaccatttt 223  Q
    |||||||||||    
T  36718537 tttaccatttt 36718527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 12661201 - 12661435
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactcta----tagttctcctttttgtacataaattggatcctat 108  Q
    |||||||||||||| || ||||||||||||||||||||||||||        ||||||||||    |  || |  |||||||| |||||| |||| ||||    
T  12661201 aatatatatgttatttcattttctttctttagtacacgtttgagtttttt--ctagactctagtttttttttttttttttgtatataaatcggattctat 12661298  T
Q  109 caaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactat 208  Q
    ||||||| |  ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||| |        |||||||||||| ||    
T  12661299 caaaccacctctaatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaat-attttttttcttcgcataaaccat 12661397  T
Q  209 tcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||||| |||| ||||||| ||||||||||||||    
T  12661398 tcgttttacccttttccacaacagaggagtgacaaatc 12661435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 138100 - 138208
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||| | ||||||||| ||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  138100 tagttctacttttcggacataaatttgatgctatcaaacca-ccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaataa 138198  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  138199 tcacaacaat 138208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 43511574 - 43511684
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||  | | ||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  43511574 tagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaat 43511673  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  43511674 cacaacaatca 43511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 29156143 - 29156256
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    |||||||| |||| | || ||||||||  | | ||||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  29156143 ctatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaag 29156242  T
Q  172 aatcacaacaatca 185  Q
    ||||||||||||||    
T  29156243 aatcacaacaatca 29156256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 10591381 - 10591271
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||  | | ||||||||||| ||  |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  10591381 tagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaatttgaaaagttatttcattgaaagaat 10591282  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  10591281 cacaacaatca 10591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 20975957 - 20976051
Alignment:
Q  91 acataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||| | | ||||||||||| |   |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20975957 acataaatttggtactatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 20976051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 42291989 - 42291879
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||| | | |||||||| || |   |||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  42291989 tagttctcctatctggacataaatttggtactatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaat 42291890  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  42291889 cacaacaatca 42291879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 8398879 - 8398989
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||         |||||||  |||||||| ||||||||||||||| ||||||||||||||    
T  8398879 atatatatgttatatccttttctttctttagtacacgtttgagtttttttt-tagactc--tagttctcatttttgtacataaatcggatcctatcaaac 8398975  T
Q  114 catccataatttgt 127  Q
    || || ||||||||    
T  8398976 cacccctaatttgt 8398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 26311962 - 26312027
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaat 140  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26311962 tagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaat 26312027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 17513998 - 17513934
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  17513998 aatttgtataatcacttaatcagtcaatttgaaaagttatttcactgaaagaatcacaacaatca 17513934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 18873458 - 18873521
Alignment:
Q  120 taatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  18873458 taatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaat 18873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 10033502 - 10033607
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataa-gtcaatttgaaaagctatttcattgaaaga 172  Q
    ||||||| |||| |||||||||||| ||| ||||||||||  |||| |||||||||||||||| | ||| |||||||||||||||||||| |||||||||    
T  10033502 tagttctactttctgtacataaatttgatgctatcaaaccc-ccatcaatttgtataatcactgattaaagtcaatttgaaaagctattttattgaaaga 10033600  T
Q  173 atcacaa 179  Q
    |||||||    
T  10033601 atcacaa 10033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 27351250 - 27351404
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    ||||||||||  |||||||||||||| |||| |||||||||        ||||||||||  |||||||||| || ||||||||| | | |||||||||||    
T  27351250 atatatgttacttccttttctttcttcagtatacgtttgagattttt--ctagactcta--gttctcctttctgaacataaatttggtgctatcaaacca 27351345  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
     |   ||||||||||| |||||||| |||||||||| |||| |||||||||||||||||    
T  27351346 cctccaatttgtataaccacttaatcagtcaatttggaaagttatttcattgaaagaat 27351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 40779148 - 40779257
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||| || ||||||||| |||  |||||||| ||||  |||||||||||||  |||||||||||||||||||| ||||| ||||| | ||||    
T  40779148 tagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactattccattg-aggaat 40779246  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  40779247 cacaacaatca 40779257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 5829371 - 5829449
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||| ||  |||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||    
T  5829371 ctatcaaaccaacctcaatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatcacaacaatca 5829449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 4734690 - 4734580
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||  | | ||||||||||| |   ||||||||||||| ||| || | |||||||||||| ||||||||||||||||||    
T  4734690 tagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctatttcattgaaagaat 4734591  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  4734590 cacaacaatca 4734580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 40956269 - 40956379
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||| || ||||||||  ||| | |||||||  ||   |||||||||||||||||||| | | |||||||||| |||||||||| |||||||    
T  40956269 tagttctcctttgtggacataaatctgatgcaatcaaacattctccaatttgtataatcacttaatcatttaatttgaaaaactatttcattaaaagaat 40956368  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  40956369 cacaacaatca 40956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 3349784 - 3349727
Alignment:
Q  128 ataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3349784 ataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatca 3349727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 33281677 - 33281740
Alignment:
Q  122 atttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||| |||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatca 33281740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 17325847 - 17325909
Alignment:
Q  122 atttgtataatcacttaataagtcaatttgaaaag-ctatttcattgaaagaatcacaacaat 183  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  17325847 atttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaat 17325909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 7390460 - 7390400
Alignment:
Q  123 tttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||||||||||||| ||||||||| ||||| |||||||| ||||||||||| |||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaat 7390400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 16515533 - 16515588
Alignment:
Q  128 ataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||||| | ||||||||||||  ||||| ||||||||||||||||||||    
T  16515533 ataatcacttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaat 16515588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 23069179 - 23069277
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatca 176  Q
    ||||||||| || ||||||||  ||| ||| ||||||| ||  ||||||||||||| |||||| | || ||||| ||||||||||||||  ||||||||    
T  23069179 ttctcctttctgaacataaatatgatgctagcaaaccacccccaatttgtataatcccttaatcattcgatttggaaagctatttcattacaagaatca 23069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 37029108 - 37029051
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttca 164  Q
    |||||||| ||||||  ||||||||||||||||||| | ||||||| |||||||||||||    
T  37029108 ctatcaaatcatcca--atttgtataatcacttaatcaatcaatttaaaaagctatttca 37029051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 931333 - 931441
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    ||||||||||| ||| | || ||||||| ||| |||| ||| ||  |  |||||||||||||||||||| |||||||||  |||||||||     |||||    
T  931333 ctatagttctcttttctatatataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagctatt-----gaaag 931427  T
Q  172 aatcacaacaatca 185  Q
    |||||||| |||||    
T  931428 aatcacaataatca 931441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 43968234 - 43968008
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  43968234 atatatgttatatccttttctttctttagtacacgtttgagttttttt-ctagactcta--gttctcctttttgtacataaatcggatcctatcaaacca 43968138  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
      | ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||        |||||||||||| |||||||||    
T  43968137 ctcctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgtttt 43968039  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||  |||| ||||||| ||||||||||||||    
T  43968038 actcttttccacaacagaggagtgacaaatc 43968008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 18420775 - 18420547
Alignment:
Q  14 atatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaac 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||        | ||||||||  ||||||||||||||||||||||  |||||||||||||    
T  18420775 atatatatgttatatcattttctttctttagtacacgtttgagtttttttcc-agactcta--gttctcctttttgtacataaatcagatcctatcaaac 18420679  T
Q  114 catccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtt 213  Q
    ||  | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||| |||||||    
T  18420678 cacacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgtt 18420580  T
Q  214 ttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||| |||| ||||||| ||||||||||||||    
T  18420579 ttaccttttttcacaacagaggagtgacaaatc 18420547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 13585199 - 13585422
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||| ||||||||||||||||||||||||||        ||||||||||  ||| || |||||||||||||||  |||||||||||||||    
T  13585199 atatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagactcta--gttttcttttttgtacataaatcagatcctatcaaacca 13585295  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     || ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||        |||||||||||| |||||||||    
T  13585296 cccctaatttgtataatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgtttt 13585394  T
Q  216 accattttacacaacaaaggagtgacaa 243  Q
    ||| |||| ||||||| |||||||||||    
T  13585395 acccttttccacaacagaggagtgacaa 13585422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 7857982 - 7858211
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  7857982 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagactcta--gttctcctttttgaacataaatcggatcctatcaaa 7858078  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
     || || ||||||||||||||||||||| |||||||||| |||| || |||||| ||||||||||||||||||        |||||||||||| ||||||    
T  7858079 tcacccctaatttgtataatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatca-tttttttcttcgcataaaccattcgt 7858177  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| |||||||| |||||    
T  7858178 tttacccttttccacaacagaggagtgaaaaatc 7858211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 43926490 - 43926261
Alignment:
Q  13 aatatatatgttatatccttttctttc-tttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaa 111  Q
    |||||||||||||||||  ||| | || |||||||||||||||||        ||||||||||  ||||| ||||||||| |||||| ||||||||||||    
T  43926490 aatatatatgttatatc--tttatatcatttagtacacgtttgagttttttttctagactcta--gttctactttttgtatataaatcggatcctatcaa 43926395  T
Q  112 accatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||||    
T  43926394 accacccataatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcg 43926296  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
     |||||| |||| ||||| | ||||||||||||||    
T  43926295 ctttacccttttccacaatagaggagtgacaaatc 43926261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 246
Target Start/End: Complemental strand, 44665154 - 44664984
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||||||||||||||| |||||||||||||||| |  |||||||||| |||||||||| |||| ||||| |||| |||||||||||||||||    
T  44665154 tagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattgaaagaat 44665055  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||||||        |||||||||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  44665054 cacaacaatca-tttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatc 44664984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 240
Target Start/End: Original strand, 3471556 - 3471720
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||| |||||||||||||||  ||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3471556 tagttctcatttttgtacataaatgtgattctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaat 3471655  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtga 240  Q
    |||||||||||        |||||||| ||| |||| ||||||| |||| ||||||| ||||||||    
T  3471656 cacaacaatca-tttttttcttcgcatgaaccattcattttacccttttccacaacagaggagtga 3471720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 18112072 - 18112243
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||| ||| ||||||||||| ||||| ||||||||||  | ||||||||||||||||||||| |||||||||| ||| |||||| |||||||||||    
T  18112072 tagttctcttttatgtacataaatcggatcatatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaat 18112171  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||||||        |||||||||||| |||||||||||| |||| ||||| | ||||||||||||||    
T  18112172 cacaacaatcattttttttcttcgcataaaccattcgttttacccttttccacaatagaggagtgacaaatc 18112243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 42951937 - 42951774
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnct---agactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||| ||||||||||||||||||||||||||        ||   ||||||||  |||||| ||||||||||||||| | |||||||||||    
T  42951937 atatatgttatatcattttctttctttagtacacgtttgagttttttttcttctagactcta--gttctcatttttgtacataaatcgaatcctatcaaa 42951840  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcaca 178  Q
    |||  | ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  42951839 ccactcctaatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcaca 42951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 27074530 - 27074692
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||| |||||||||||||||||||  ||||||||||||||| || ||||||||||||||||||||| ||||||||| |||  |||||||||||||| |||    
T  27074530 tagtactcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaat 27074629  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagt 238  Q
    |||||||||||        |||||||||||| ||| |||||||| |||| ||||||| ||||||    
T  27074630 cacaacaatca-tttttttcttcgcataaaccatttgttttacctttttccacaacagaggagt 27074692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 5869428 - 5869320
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||| ||||||||||||| || ||||||||||| ||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  5869428 tagttctcctttctgtacataaattg-atactatcaaacca-ccacaatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaat 5869331  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  5869330 cacaacaatca 5869320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 32098344 - 32098178
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||  || ||||||||||| ||||||||||||||        ||||||||||  ||| ||||||||| ||||||||| ||| ||||||||    
T  32098344 aatatatatgttacttctttttctttcttcagtacacgtttgagtttttt--ctagactcta--gttatcctttttggacataaatttgatgctatcaaa 32098249  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||  | |||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  32098248 ccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaat 32098178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 34524059 - 34523949
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||  | | ||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34524059 tagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaat 34523960  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  34523959 cacaacaatca 34523949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 1004059 - 1004183
Alignment:
Q  120 taatttgtataatcacttaataagtcaatttg-aaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttacc 218  Q
    ||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||        | |||||||||| ||||||||||||    
T  1004059 taatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcattttttttcatcgcataaaccattcgttttacc 1004158  T
Q  219 attttacacaacaaaggagtgacaa 243  Q
     |||| ||||||| |||||||||||    
T  1004159 cttttccacaacagaggagtgacaa 1004183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 3628838 - 3628747
Alignment:
Q  92 cataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||| ||| ||||||||||| |  |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  3628838 cataaatttgatgctatcaaaccaccattaatttgtataatcacataatcagtcaatttgaaaagttatttcattgaaagaatcacaacaat 3628747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 12531561 - 12531625
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  12531561 aatttgtataatcacttaatcagtcaatttaaaaatctatttcattgaaagaatcacaacaatca 12531625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 39698029 - 39697938
Alignment:
Q  92 cataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||||| | | ||||||||||| |   ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39698029 cataaatttggtactatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatcacaacaat 39697938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 23567352 - 23567274
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||| ||  |||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||    
T  23567352 ctatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaat 23567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 30915346 - 30915285
Alignment:
Q  125 tgtataatcacttaataagtcaatttgaaaagctatttcatt-gaaagaatcacaacaatca 185  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  30915346 tgtataatcacttaatcagtcaatttgaaaagctatttcattaaaaagaatcacaacaatca 30915285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 29372343 - 29372423
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||| | ||| |||||||||||||| ||||| |||||||||| |||| ||||  ||||||||||| ||||||||||    
T  29372343 ctatcaaactacccacaatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatca 29372423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 3445579 - 3445621
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttga 55  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  3445579 aatatatatgttatatctttttctttctttagtacacgtttga 3445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 35874928 - 35874990
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| | ||||||| |||||||||    
T  35874928 aatttgtataatcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 35874990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 1003986 - 1004029
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  1003986 aatatatatgttatatcattttctttctttagtacatgtttgag 1004029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 42076110 - 42076165
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatca 176  Q
    |||||||||||| ||||||| | |||||||||||||||||  ||||||||||||||    
T  42076110 aatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatca 42076165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 18112011 - 18112050
Alignment:
Q  17 tatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  18112011 tatatgttatatcattttctttctttagtatacgtttgag 18112050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 36515202 - 36515156
Alignment:
Q  137 taataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||| ||| ||||| |||| |||||||||||||||||||||||||||    
T  36515202 taatcagttaatttaaaaaactatttcattgaaagaatcacaacaat 36515156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 177
Target Start/End: Complemental strand, 3575175 - 3575146
Alignment:
Q  148 tttgaaaagctatttcattgaaagaatcac 177  Q
    ||||||||||||||||||||||||||||||    
T  3575175 tttgaaaagctatttcattgaaagaatcac 3575146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 42777763 - 42777811
Alignment:
Q  137 taataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||| |||||||||  |||||||||| ||| ||||||||||||||||||    
T  42777763 taattagtcaatttagaaagctatttaattaaaagaatcacaacaatca 42777811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 33419285 - 33419055
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||        ||||||||||  |||||  ||||||||||||||| |||||||||||||    
T  33419285 aatatatatgttatatccttttctttctttaatacacgtttgagttttttt-ctagactcta--gttcttgtttttgtacataaatcggatcctatcaaa 33419189  T
Q  113 ccatccataatttgtataatcacttaa-taagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg 211  Q
    | | || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||        |||||||||||| |||||    
T  33419188 ctacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatca-tttttttcttcgcataaaccattcg 33419090  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||||||||  |||||| ||||||||||||||    
T  33419089 ttttaccattttctacaacagaggagtgacaaatc 33419055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 36796538 - 36796309
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||        ||||||| | |||||||||||||||||||||||| |||||||||||||    
T  36796538 aatatatatgttatatcattt-ctttctttagtacacgtttgagtttttt--ctagact-tctagttctcctttttgtacataaatcggatcctatcaaa 36796443  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    | | || ||||||||||||| ||||||| |||||||||| |||  ||||||||||||||||||||||||||||        |||||||||||| ||||||    
T  36796442 ctacccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgt 36796343  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| |||| ||||||| ||||||||||||||    
T  36796342 tttacccttttccacaacagaggagtgacaaatc 36796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 4099865 - 4100095
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||        |||||| |||   ||||||||||||||||||||| ||||| |||||||    
T  4099865 aatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagacgctaa--ttctcctttttgtacataaatcggatc-tatcaaa 4099961  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcg- 211  Q
    ||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||        ||||||| |||| |||||     
T  4099962 ccacccctaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaattacaacaatca-tttttttcttcgcaaaaaccattcgt 4100060  T
Q  212 ttttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||| |||| ||||||| ||||||||||||||    
T  4100061 ttttacccttttccacaacagaggagtgacaaatc 4100095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 18015748 - 18015519
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    |||||||||||||||||||||||||||||||||||| |||||||        ||||||||||  ||| |||||||||||||||||| |||||||||||||    
T  18015748 aatatatatgttatatccttttctttctttagtacatgtttgagtttttt--ctagactcta--gttttcctttttgtacataaatcggatcctatcaaa 18015653  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca-nnnnnnnncttcgcataaactattcg 211  Q
    ||| || ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |         |||||||| ||| |||||    
T  18015652 ccacccctaatttgtataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaattatttttttttcttcgcattaaccattcg 18015553  T
Q  212 ttttaccattttacacaacaaaggagtgacaaat 245  Q
    ||||||| |||||||||||| |  ||||||||||    
T  18015552 ttttacccttttacacaacagaaaagtgacaaat 18015519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 246
Target Start/End: Complemental strand, 6380249 - 6380022
Alignment:
Q  16 atatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaacca 115  Q
    |||||||||||||| |||| |||||||||||||||||||||        ||||||||||  ||||| |||||||||||| |||  |||||||||||||||    
T  6380249 atatatgttatatcattttatttctttagtacacgtttgagttttttttctagactcta--gttcttctttttgtacatgaatctgatcctatcaaacca 6380152  T
Q  116 tccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgtttt 215  Q
     || ||||||||||||||||||||| | |||||||| ||  |||||||||||||||||||||||||||||        |||||||||||| |||||||||    
T  6380151 cccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatca-tatttttcttcgcataaaccattcgtttt 6380053  T
Q  216 accattttacacaacaaaggagtgacaaatc 246  Q
    ||| |||| ||||||| ||||||||||||||    
T  6380052 acccttttccacaacagaggagtgacaaatc 6380022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 46221870 - 46221641
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| |||||||||||||||| |||||||||        ||||||||||  |||||| ||||||||||||||| | |||||||||||    
T  46221870 aatatatatgttatatcattttctttctttagtatacgtttgagttttttt-ctagactcta--gttctcttttttgtacataaatcgaatcctatcaaa 46221774  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgt 212  Q
    | | || ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||         ||||||||||| ||||||    
T  46221773 ctacccctaatttgtagaatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttta-ttcgcataaaccattcgt 46221675  T
Q  213 tttaccattttacacaacaaaggagtgacaaatc 246  Q
    ||||||||||| ||||||| | || |||||||||    
T  46221674 tttaccattttccacaacagaagaatgacaaatc 46221641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 11672481 - 11672716
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacata--aattggatcctatca 110  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||        ||||||||||  |||||||||||||||||||  ||| |||||||||||    
T  11672481 aatatatatgttatatcattttctttctttagtacacatttgagttttttt-ctagactcta--gttctcctttttgtacatataaatcggatcctatca 11672577  T
Q  111 aaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattc 210  Q
    |||||  | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||        |||||||||||  ||||    
T  11672578 aaccactcctaatttgtataatcacttaatcagtcaatttggaaagttatttcaatgaaagaatcacaacaatca-tttttttcttcgcataaatcattc 11672676  T
Q  211 gttttaccattttacacaacaaaggagtgacaaatctaaa 250  Q
    |||||||  |||| ||||||| ||||||||||||||||||    
T  11672677 gttttactcttttccacaacagaggagtgacaaatctaaa 11672716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 42161289 - 42161060
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctat--ca 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||   ||||| |||||||||||||||||||||||||  ||    
T  42161289 aatatatatgttatatcattttctttctttagtacacgtttgagttttttt-ctagactctaa--ttctcatttttgtacataaattggatcctatatca 42161193  T
Q  111 aaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattc 210  Q
    ||||| || |||||||||||||||||| || ||| |||||| |||||||||||||||||||||||||| ||| ||        |||||||||||| ||||    
T  42161192 aaccacccctaatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcacagcaa-ca--atttttcttcgcataaaccattc 42161096  T
Q  211 gttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||| |||| ||||||| ||||||||||||||    
T  42161095 gttttacctttttccacaacagaggagtgacaaatc 42161060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 33910020 - 33910190
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    ||||||||||||||||||||||||  |||||||||||| || || |||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  33910020 tagttctcctttttgtacataaatctgatcctatcaaatcacccctaatttgtataatcgcttaatcagtcaatttgaaaagctatttcattgaaagaat 33910119  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||||||||        |||||||||||| |||||||||||| |||| ||||||| |||| | |||||||    
T  33910120 cacaacaatca-tttttttcttcgcataaaccattcgttttacccttttccacaacagaggaattacaaatc 33910190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 8358461 - 8358292
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaa 112  Q
    ||||||||||||||||| |||||||||||||||| |||||||||        ||||||| ||  |||||||||||||||||||||| |||||||||||||    
T  8358461 aatatatatgttatatcattttctttctttagtatacgtttgagtttttct-ctagacttta--gttctcctttttgtacataaatcggatcctatcaaa 8358365  T
Q  113 ccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||| || |||||| |||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||    
T  8358364 ccacccctaatttatataatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatca 8358292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 44894140 - 44893968
Alignment:
Q  72 ctatagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaag 171  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| || ||||||||||||||||||||| | |||||||| |||||||||| ||||||||    
T  44894140 ctatagttcttctttttgtacataaatcggatcctattaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctattttattgaaag 44894041  T
Q  172 aatcacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    ||||||||||||||        |||| ||||||| |||||||||||| |||| |||| ||||||||| ||||||    
T  44894040 aatcacaacaatca-tttttttcttcacataaaccattcgttttacccttttccacagcaaaggagttacaaat 44893968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 245
Target Start/End: Complemental strand, 7636431 - 7636264
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    |||||| |||||||||||| |  ||||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |    
T  7636431 ttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcgc 7636332  T
Q  178 aacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    ||||||||        |||| ||||| | |||||||||||| |||| ||||||| | |||||||||||    
T  7636331 aacaatcattttttttcttcccataagccattcgttttacccttttccacaacagaagagtgacaaat 7636264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 12251365 - 12251226
Alignment:
Q  106 tatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaac 205  Q
    |||||||||| || |||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaac 12251267  T
Q  206 tattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
     |||||||||||| |||| ||||||| ||||||||||||||    
T  12251266 cattcgttttacccttttccacaacagaggagtgacaaatc 12251226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 26633319 - 26633429
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| |||| |||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26633319 tagttctactttctggacataaatttgatgctataaaacca-ccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaa 26633417  T
Q  174 tcacaacaatca 185  Q
    ||||||||||||    
T  26633418 tcacaacaatca 26633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 26282650 - 26282540
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||  | | ||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26282650 tagttctcctatctgcacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaat 26282551  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  26282550 cacaacaatca 26282540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 40001774 - 40001694
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||| |   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40001774 ctatcaaaccacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 40001694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 30739082 - 30739189
Alignment:
Q  78 ttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcac 177  Q
    ||||||||| || |||||||| |||| |||||||||||||   ||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  30739082 ttctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatcacttaatcagtcaatttgaaaagttatttcattaaaagaatcac 30739181  T
Q  178 aacaatca 185  Q
    ||| ||||    
T  30739182 aacgatca 30739189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 36438459 - 36438351
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| ||||||||||| | || |||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  36438459 tagttctactttctggacataaatttgatgctatcaaacca-ctatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcattgaaagaa 36438361  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  36438360 tcacaacaat 36438351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 40738099 - 40737994
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||||  ||||||||| ||| ||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  40738099 tagttctacttttttgacataaatttgatgctatcaaacca-ccatcaatttgtataattacttaatcagtcaatttaaaaagctattttattgaaagaa 40738001  T
Q  174 tcacaac 180  Q
    |||||||    
T  40738000 tcacaac 40737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 9479083 - 9479191
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccat-aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| |||| || ||||||||| ||| ||||||||||| |||| |||||||||||| ||||||| ||||||||| |||| ||||||| |||||||||    
T  9479083 tagttctactttctggacataaatttgatgctatcaaacca-ccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgttgaaagaa 9479181  T
Q  174 tcacaacaat 183  Q
    ||||||||||    
T  9479182 tcacaacaat 9479191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 773962 - 773882
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||| || || ||||||||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  773962 ctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatca 773882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 32956731 - 32956839
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||| || ||||||||  ||| ||||||||||| ||  ||||| |||||||| ||||| |||||||||  |||| |||||||||||||||||    
T  32956731 tagttctcctttctggacataaatctgatgctatcaaaccacccccaatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaat 32956830  T
Q  175 cacaacaat 183  Q
    |||||||||    
T  32956831 cacaacaat 32956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 41908143 - 41908244
Alignment:
Q  84 tttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||| ||||||||  ||| || |||||||| |   |||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  41908143 tttttggacataaatctgatgctttcaaaccacctccaatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaat 41908242  T
Q  184 ca 185  Q
    ||    
T  41908243 ca 41908244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 18895489 - 18895397
Alignment:
Q  91 acataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    ||||||||| |||  ||||||||||    ||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  18895489 acataaatttgatgttatcaaaccactattaatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaat 18895397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 42312012 - 42312071
Alignment:
Q  122 atttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaaca 181  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  42312012 atttgtataatcacttgattagtcaatttgaaaagctatttcattaaaagaatcacaaca 42312071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 1365965 - 1366075
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||| | || ||||||||| | | |||||||||||     |||| ||||||| ||||||| ||||||||||||||| |||||||| ||||||||    
T  1365965 tagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagttatttcatagaaagaat 1366064  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  1366065 cacaacaatca 1366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 25061859 - 25061957
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaa 173  Q
    ||||||| ||||||| ||||||||  ||| ||||||||| || |  |||||||| |||||||| || ||| ||||||||||||||||||||||||||||    
T  25061859 tagttcttctttttggacataaatctgatgctatcaaactattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 3799819 - 3799758
Alignment:
Q  124 ttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||||||||| |||||||| ||||||   ||||||||||||||||||||||||||||||||    
T  3799819 ttgtataatcatttaataagccaattttggaagctatttcattgaaagaatcacaacaatca 3799758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 12251554 - 12251466
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcc 105  Q
    |||||||||||||| || ||||||||||||||||||||||||||        ||||||||  |||||||||||||||||||||||| ||||||    
T  12251554 aatatatatgttatctcattttctttctttagtacacgtttgag--ttttttctagactc--tagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 38525082 - 38525125
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgag 56  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  38525082 aatatatatgttatatctttttctttctttagtacacgtttgag 38525125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 7366689 - 7366751
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 183  Q
    |||||| ||||| |||||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  7366689 aatttgaataattacttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaat 7366751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 44876217 - 44876153
Alignment:
Q  121 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    ||||| || ||||| ||||| |||||||||  |||||||||||||| ||||||||||||||||||    
T  44876217 aatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatca 44876153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 25610091 - 25610132
Alignment:
Q  144 tcaatttgaaaagctatttcattgaaagaatcacaacaatca 185  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  25610091 tcaatttgaaaagtcatttcattgaaagaatcacaacaatca 25610132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 41852356 - 41852302
Alignment:
Q  127 tataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaaca 181  Q
    |||||||||||| | ||||||||| || || |||||||||||||||||| |||||    
T  41852356 tataatcacttactcagtcaatttaaagagttatttcattgaaagaatcgcaaca 41852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 16666 - 16836
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16666 tagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaat 16765  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaatc 246  Q
    |||||| ||||        |||||||||||| |||||||||||| |||| ||||||| |||||| |||||||    
T  16766 cacaacgatca-tatttttcttcgcataaaccattcgttttacccttttccacaacagaggagtaacaaatc 16836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 75 - 245
Target Start/End: Complemental strand, 17240 - 17071
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||| |||||||| |||||| ||||||||||||| || || ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  17240 tagttctcatttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcgttgaaagaat 17141  T
Q  175 cacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaaat 245  Q
    |||||||||||        |||||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  17140 cacaacaatca-ttttcttcttcgcataaaccattcgttttaccattttccacaacaaagaagtgacaaat 17071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 246
Target Start/End: Original strand, 979 - 1187
Alignment:
Q  22 gttatatccttttctttctttagtacacgtttgagnnnnnnnnctagactctatagttctcctttttgtacataaattggatcctatcaaaccatccata 121  Q
    ||||||||||||| |||||||| |||| |||||||        ||||||||||  |||||||||||||| ||||||| |||||||||||||||| || ||    
T  979 gttatatccttttatttctttattacatgtttgagttttttt-ctagactcta--gttctcctttttgtgcataaatcggatcctatcaaaccaccccta 1075  T
Q  122 atttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttaccatt 221  Q
    ||||||||||            |||||||| |||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||| ||    
T  1076 atttgtataa------------tcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttttcttcgcataaaccattcgttttaccctt 1162  T
Q  222 ttacacaacaaaggagtgacaaatc 246  Q
    || ||||||| ||||||||||||||    
T  1163 ttccacaacataggagtgacaaatc 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 46281 - 46171
Alignment:
Q  75 tagttctcctttttgtacataaattggatcctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaat 174  Q
    |||||||| ||||| |||||| ||  ||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||  |||||||||||||| |||    
T  46281 tagttctcatttttatacatatatctgatcctatcaaaccacccataatttggataatcacttaatcagtcaatttggaagtctatttcattgaaataat 46182  T
Q  175 cacaacaatca 185  Q
    |||||||||||    
T  46181 cacaacaatca 46171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 8473 - 8399
Alignment:
Q  105 ctatcaaaccatccataatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaa 179  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||  ||| |||||||||||||||||||||||    
T  8473 ctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcattgaaagaatcacaa 8399  T

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Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 22844 - 22744
Alignment:
Q  144 tcaatttgaaaagctatttcattgaaagaatcacaacaatcannnnnnnncttcgcataaactattcgttttaccattttacacaacaaaggagtgacaa 243  Q
    ||||| |||||| ||||||||||||||||||||||| ||| |        |||||||||||| |||||||||||| |||| ||||||| |||||||||||    
T  22844 tcaatatgaaaaactatttcattgaaagaatcacaataattattttttt-cttcgcataaaccattcgttttacccttttccacaacataggagtgacaa 22746  T
Q  244 at 245  Q
    ||    
T  22745 at 22744  T

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Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 22931 - 22888
Alignment:
Q  13 aatatatatgttatatccttttctttctttagtacacgtttgag 56  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  22931 aatatatatgttatatccttttatttctttagtacacgtttgag 22888  T

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