View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13105_high_7 (Length: 396)

Name: NF13105_high_7
Description: NF13105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13105_high_7
NF13105_high_7
[»] chr1 (63 HSPs)
chr1 (226-381)||(51417820-51417976)
chr1 (1-110)||(51418149-51418258)
chr1 (1-110)||(45750643-45750752)
chr1 (1-110)||(32784244-32784353)
chr1 (1-110)||(44517312-44517422)
chr1 (1-110)||(14265449-14265558)
chr1 (1-110)||(15391099-15391208)
chr1 (1-110)||(29205450-29205559)
chr1 (1-108)||(4882206-4882313)
chr1 (1-107)||(4870880-4870986)
chr1 (8-110)||(7995414-7995516)
chr1 (1-107)||(42276523-42276629)
chr1 (1-110)||(3232953-3233062)
chr1 (13-110)||(13488395-13488492)
chr1 (1-102)||(10627173-10627273)
chr1 (1-110)||(18343778-18343886)
chr1 (1-110)||(45193475-45193584)
chr1 (8-102)||(28677984-28678078)
chr1 (13-110)||(29726456-29726553)
chr1 (28-110)||(17347762-17347844)
chr1 (5-110)||(33486881-33486986)
chr1 (1-110)||(33938860-33938969)
chr1 (1-110)||(37822193-37822301)
chr1 (1-110)||(32878873-32878976)
chr1 (1-110)||(27534862-27534971)
chr1 (7-102)||(15791128-15791223)
chr1 (179-237)||(51418022-51418080)
chr1 (38-107)||(9298300-9298369)
chr1 (38-107)||(12871789-12871858)
chr1 (38-109)||(42491059-42491130)
chr1 (38-101)||(28399213-28399276)
chr1 (38-110)||(50107797-50107871)
chr1 (8-110)||(424145-424247)
chr1 (61-110)||(20411737-20411786)
chr1 (38-98)||(25032972-25033032)
chr1 (41-105)||(31427037-31427101)
chr1 (3-102)||(47551268-47551361)
chr1 (53-108)||(8737517-8737572)
chr1 (38-109)||(10304744-10304815)
chr1 (38-109)||(26097889-26097960)
chr1 (38-109)||(39080799-39080870)
chr1 (23-65)||(20413051-20413093)
chr1 (55-101)||(32301512-32301558)
chr1 (1-38)||(8893524-8893561)
chr1 (37-110)||(13869802-13869875)
chr1 (179-226)||(424345-424393)
chr1 (179-226)||(14265303-14265351)
chr1 (38-101)||(24114563-24114626)
chr1 (68-102)||(45425389-45425423)
chr1 (1-38)||(900324-900361)
chr1 (1-38)||(6212760-6212797)
chr1 (179-227)||(7995614-7995663)
chr1 (38-79)||(13152636-13152677)
chr1 (1-38)||(13969486-13969523)
chr1 (38-107)||(29802794-29802863)
chr1 (5-38)||(45659245-45659278)
chr1 (1-37)||(2486144-2486180)
chr1 (38-102)||(3101840-3101904)
chr1 (38-102)||(10599052-10599116)
chr1 (38-98)||(25689725-25689785)
chr1 (38-98)||(29069725-29069785)
chr1 (38-102)||(29938411-29938474)
chr1 (179-218)||(37822399-37822439)
[»] chr2 (69 HSPs)
chr2 (1-110)||(35333670-35333779)
chr2 (1-110)||(10286854-10286963)
chr2 (1-110)||(9978516-9978625)
chr2 (1-110)||(38384304-38384413)
chr2 (5-110)||(44942451-44942556)
chr2 (1-108)||(4739496-4739603)
chr2 (1-110)||(29542957-29543067)
chr2 (1-110)||(18089244-18089353)
chr2 (1-110)||(32314607-32314716)
chr2 (1-110)||(33012213-33012322)
chr2 (1-109)||(36868174-36868282)
chr2 (1-108)||(31908664-31908770)
chr2 (1-110)||(4732235-4732344)
chr2 (1-110)||(28230944-28231053)
chr2 (5-110)||(34962927-34963032)
chr2 (1-110)||(43473975-43474084)
chr2 (1-93)||(34416610-34416702)
chr2 (5-108)||(43696035-43696138)
chr2 (4-98)||(13878859-13878953)
chr2 (4-98)||(14018984-14019078)
chr2 (1-107)||(20560979-20561085)
chr2 (1-102)||(9689832-9689933)
chr2 (5-110)||(17267977-17268082)
chr2 (1-110)||(22597300-22597409)
chr2 (1-102)||(27095879-27095980)
chr2 (1-110)||(28261735-28261844)
chr2 (1-109)||(13740507-13740615)
chr2 (3-110)||(4426507-4426614)
chr2 (1-108)||(7072795-7072902)
chr2 (7-102)||(12890971-12891066)
chr2 (7-102)||(38535158-38535253)
chr2 (1-110)||(12704852-12704961)
chr2 (1-110)||(25068017-25068124)
chr2 (7-110)||(4604159-4604263)
chr2 (38-107)||(20124653-20124722)
chr2 (1-110)||(32015418-32015527)
chr2 (38-109)||(5754454-5754525)
chr2 (5-110)||(41797759-41797861)
chr2 (5-96)||(7581944-7582029)
chr2 (38-110)||(11798407-11798479)
chr2 (38-102)||(34471139-34471203)
chr2 (41-110)||(823845-823914)
chr2 (13-110)||(11937718-11937814)
chr2 (39-107)||(8531447-8531515)
chr2 (52-108)||(26254834-26254890)
chr2 (38-110)||(40039192-40039264)
chr2 (39-102)||(11581015-11581078)
chr2 (38-101)||(13548785-13548848)
chr2 (38-97)||(15920052-15920111)
chr2 (38-97)||(17792652-17792711)
chr2 (1-59)||(11942584-11942642)
chr2 (39-109)||(12994098-12994167)
chr2 (179-223)||(4604361-4604406)
chr2 (38-107)||(6431286-6431355)
chr2 (33-110)||(6510647-6510724)
chr2 (179-226)||(27095724-27095772)
chr2 (38-110)||(27666375-27666447)
chr2 (179-218)||(33012104-33012144)
chr2 (62-108)||(8781719-8781765)
chr2 (53-99)||(45694345-45694391)
chr2 (53-94)||(11426824-11426865)
chr2 (179-223)||(17268178-17268223)
chr2 (38-99)||(17767444-17767505)
chr2 (179-226)||(9690027-9690075)
chr2 (179-226)||(15919893-15919941)
chr2 (179-226)||(22597154-22597202)
chr2 (179-218)||(25067879-25067919)
chr2 (2-38)||(35353871-35353907)
chr2 (38-101)||(43696937-43697001)
[»] chr6 (35 HSPs)
chr6 (3-110)||(35219762-35219869)
chr6 (1-110)||(23101255-23101364)
chr6 (1-110)||(15589955-15590064)
chr6 (1-110)||(23654415-23654524)
chr6 (1-110)||(31937267-31937376)
chr6 (1-109)||(31705331-31705439)
chr6 (1-110)||(1106714-1106823)
chr6 (1-110)||(2304685-2304794)
chr6 (1-110)||(8693501-8693610)
chr6 (1-110)||(23637967-23638076)
chr6 (1-110)||(12481217-12481326)
chr6 (1-107)||(4393938-4394044)
chr6 (1-110)||(21507684-21507793)
chr6 (2-110)||(14782990-14783098)
chr6 (1-99)||(29920764-29920862)
chr6 (1-110)||(6419705-6419814)
chr6 (53-110)||(19402709-19402766)
chr6 (38-110)||(4921765-4921837)
chr6 (28-110)||(6296123-6296205)
chr6 (28-110)||(6302933-6303015)
chr6 (1-110)||(13871473-13871576)
chr6 (1-74)||(30813267-30813340)
chr6 (48-110)||(1915080-1915142)
chr6 (39-108)||(2488304-2488373)
chr6 (64-109)||(29284919-29284964)
chr6 (38-97)||(16328952-16329011)
chr6 (38-97)||(16338187-16338246)
chr6 (1-110)||(12654156-12654259)
chr6 (39-97)||(16339734-16339792)
chr6 (38-99)||(1418981-1419042)
chr6 (48-109)||(7076708-7076769)
chr6 (39-100)||(31801116-31801177)
chr6 (39-107)||(3610230-3610298)
chr6 (55-107)||(5527526-5527578)
chr6 (179-218)||(6419912-6419952)
[»] chr4 (76 HSPs)
chr4 (3-110)||(36124197-36124304)
chr4 (1-110)||(13965725-13965834)
chr4 (1-110)||(20399750-20399859)
chr4 (1-110)||(24825814-24825923)
chr4 (1-110)||(43244228-43244337)
chr4 (1-109)||(31522112-31522220)
chr4 (1-110)||(7060488-7060597)
chr4 (2-110)||(32616707-32616815)
chr4 (1-108)||(22757261-22757368)
chr4 (1-110)||(6882121-6882230)
chr4 (1-110)||(38943995-38944104)
chr4 (5-109)||(39523575-39523680)
chr4 (1-109)||(24100306-24100414)
chr4 (1-108)||(6911847-6911954)
chr4 (7-110)||(13586093-13586196)
chr4 (3-110)||(25658332-25658439)
chr4 (1-108)||(28837232-28837339)
chr4 (1-99)||(51152300-51152398)
chr4 (1-110)||(394121-394230)
chr4 (1-110)||(477859-477968)
chr4 (5-110)||(26674537-26674642)
chr4 (1-102)||(30202211-30202312)
chr4 (1-110)||(42197718-42197827)
chr4 (1-110)||(50801382-50801491)
chr4 (1-110)||(53647797-53647906)
chr4 (18-110)||(27394995-27395087)
chr4 (7-110)||(2447965-2448068)
chr4 (3-110)||(20887606-20887712)
chr4 (7-110)||(26742316-26742419)
chr4 (3-110)||(29923000-29923107)
chr4 (1-110)||(11210160-11210269)
chr4 (5-110)||(24568564-24568669)
chr4 (1-92)||(7083659-7083750)
chr4 (28-102)||(626424-626498)
chr4 (1-107)||(44756889-44756995)
chr4 (1-109)||(5814512-5814614)
chr4 (1-110)||(19745554-19745663)
chr4 (1-110)||(19794143-19794252)
chr4 (1-110)||(39837760-39837869)
chr4 (1-110)||(43278099-43278208)
chr4 (30-110)||(7861082-7861162)
chr4 (13-109)||(24611659-24611754)
chr4 (38-110)||(8712695-8712767)
chr4 (28-107)||(43493161-43493240)
chr4 (1-107)||(45350917-45351023)
chr4 (1-107)||(45360396-45360502)
chr4 (39-110)||(3159159-3159230)
chr4 (28-110)||(29268651-29268733)
chr4 (1-38)||(5388746-5388783)
chr4 (39-96)||(6082309-6082366)
chr4 (39-108)||(27090890-27090959)
chr4 (38-98)||(22121623-22121683)
chr4 (29-110)||(8517334-8517412)
chr4 (38-109)||(24789355-24789426)
chr4 (38-109)||(24818833-24818904)
chr4 (1-99)||(56236675-56236767)
chr4 (53-110)||(12717016-12717073)
chr4 (179-226)||(24825668-24825716)
chr4 (2-38)||(35658378-35658414)
chr4 (42-97)||(13169329-13169384)
chr4 (39-102)||(31932435-31932498)
chr4 (71-108)||(1531964-1532001)
chr4 (38-109)||(18995455-18995523)
chr4 (1-38)||(33020773-33020810)
chr4 (1-38)||(42972269-42972306)
chr4 (179-223)||(44757096-44757141)
chr4 (38-107)||(56172012-56172081)
chr4 (179-218)||(7060351-7060391)
chr4 (179-218)||(13965587-13965627)
chr4 (179-218)||(22757121-22757161)
chr4 (179-226)||(29268831-29268879)
chr4 (70-110)||(29965689-29965729)
chr4 (179-218)||(31522009-31522049)
chr4 (179-218)||(43244435-43244475)
chr4 (6-38)||(50981565-50981597)
chr4 (39-99)||(55600422-55600482)
[»] chr3 (57 HSPs)
chr3 (1-107)||(40013127-40013233)
chr3 (1-108)||(48401029-48401136)
chr3 (8-110)||(35174873-35174975)
chr3 (1-110)||(49627950-49628059)
chr3 (1-110)||(53155285-53155394)
chr3 (1-110)||(53402786-53402895)
chr3 (1-110)||(1074749-1074858)
chr3 (5-110)||(22485130-22485235)
chr3 (1-110)||(31270491-31270600)
chr3 (1-110)||(48855042-48855151)
chr3 (1-110)||(54706570-54706679)
chr3 (1-110)||(3457104-3457213)
chr3 (1-110)||(14585627-14585736)
chr3 (1-110)||(36624550-36624659)
chr3 (1-102)||(45047687-45047788)
chr3 (1-108)||(31462601-31462708)
chr3 (1-110)||(36691654-36691763)
chr3 (5-110)||(40883725-40883830)
chr3 (1-108)||(48401280-48401392)
chr3 (1-96)||(19861134-19861229)
chr3 (28-102)||(13701883-13701957)
chr3 (32-110)||(55455030-55455108)
chr3 (5-110)||(11819248-11819353)
chr3 (1-102)||(32080609-32080710)
chr3 (1-110)||(48652295-48652404)
chr3 (14-110)||(27189272-27189368)
chr3 (2-110)||(55446222-55446330)
chr3 (5-110)||(33637568-33637673)
chr3 (1-110)||(41868178-41868287)
chr3 (5-92)||(19645374-19645461)
chr3 (8-110)||(54238882-54238982)
chr3 (4-110)||(30156139-30156245)
chr3 (8-109)||(39610376-39610477)
chr3 (38-110)||(105927-105999)
chr3 (1-80)||(24483534-24483613)
chr3 (1-102)||(34103603-34103703)
chr3 (5-73)||(4081910-4081978)
chr3 (38-107)||(39429393-39429462)
chr3 (53-110)||(53962283-53962340)
chr3 (1-48)||(38530168-38530215)
chr3 (38-109)||(47733769-47733840)
chr3 (38-110)||(3961654-3961726)
chr3 (29-79)||(4817759-4817810)
chr3 (41-96)||(31730823-31730878)
chr3 (1-48)||(34960757-34960804)
chr3 (55-101)||(3312618-3312664)
chr3 (39-107)||(25135204-25135272)
chr3 (41-96)||(20044743-20044798)
chr3 (57-107)||(6894658-6894708)
chr3 (1-38)||(21803762-21803799)
chr3 (38-110)||(2147922-2147993)
chr3 (179-218)||(14585489-14585529)
chr3 (2-38)||(33076516-33076552)
chr3 (179-218)||(34960920-34960960)
chr3 (179-218)||(35174731-35174771)
chr3 (179-226)||(36691861-36691909)
chr3 (179-218)||(54239080-54239120)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-110)||(13096-13201)
[»] chr8 (46 HSPs)
chr8 (1-109)||(14600553-14600661)
chr8 (1-110)||(4757330-4757439)
chr8 (3-110)||(37612818-37612925)
chr8 (1-110)||(9501751-9501860)
chr8 (1-110)||(10338677-10338786)
chr8 (1-110)||(30026737-30026846)
chr8 (3-102)||(11162056-11162155)
chr8 (2-108)||(31407604-31407710)
chr8 (1-110)||(1810077-1810186)
chr8 (1-110)||(7579710-7579819)
chr8 (1-110)||(12329792-12329901)
chr8 (1-110)||(39067544-39067653)
chr8 (2-110)||(2234326-2234434)
chr8 (1-99)||(10148121-10148219)
chr8 (1-110)||(2025079-2025188)
chr8 (1-98)||(24791023-24791120)
chr8 (1-110)||(37128343-37128451)
chr8 (1-108)||(13570594-13570701)
chr8 (1-102)||(24700005-24700106)
chr8 (1-102)||(41361905-41362006)
chr8 (5-93)||(19720191-19720279)
chr8 (1-108)||(31202625-31202732)
chr8 (1-110)||(22787657-22787764)
chr8 (13-78)||(23971050-23971115)
chr8 (33-110)||(43937064-43937141)
chr8 (5-109)||(3204644-3204748)
chr8 (24-107)||(28296985-28297068)
chr8 (1-96)||(31308327-31308422)
chr8 (1-108)||(24210408-24210515)
chr8 (38-110)||(2968697-2968769)
chr8 (39-110)||(10633074-10633145)
chr8 (38-101)||(32778849-32778912)
chr8 (38-98)||(19489006-19489066)
chr8 (38-109)||(10334342-10334413)
chr8 (39-107)||(6219989-6220057)
chr8 (42-110)||(13576090-13576158)
chr8 (179-225)||(23971156-23971203)
chr8 (1-96)||(38546009-38546103)
chr8 (1-72)||(40490371-40490442)
chr8 (179-226)||(31308167-31308215)
chr8 (63-110)||(1039811-1039858)
chr8 (1-44)||(5526033-5526076)
chr8 (32-67)||(15288719-15288754)
chr8 (32-67)||(15469088-15469123)
chr8 (1-38)||(18196992-18197029)
chr8 (2-38)||(32062025-32062061)
[»] chr7 (66 HSPs)
chr7 (3-110)||(41288121-41288228)
chr7 (1-110)||(10574546-10574655)
chr7 (1-110)||(17473599-17473708)
chr7 (1-110)||(17509051-17509160)
chr7 (1-110)||(17544054-17544163)
chr7 (1-110)||(17579506-17579615)
chr7 (1-109)||(3266552-3266660)
chr7 (1-99)||(36253106-36253204)
chr7 (1-110)||(1280984-1281093)
chr7 (1-110)||(21990827-21990936)
chr7 (1-110)||(42644837-42644946)
chr7 (3-107)||(9785485-9785589)
chr7 (6-110)||(10094606-10094710)
chr7 (5-109)||(11833184-11833288)
chr7 (1-109)||(45457403-45457511)
chr7 (3-110)||(21603625-21603732)
chr7 (1-108)||(26161118-26161225)
chr7 (1-110)||(45482229-45482338)
chr7 (7-110)||(9719826-9719929)
chr7 (3-110)||(24988329-24988436)
chr7 (3-109)||(48304241-48304348)
chr7 (8-110)||(28664795-28664897)
chr7 (1-102)||(42603616-42603717)
chr7 (1-110)||(46025876-46025985)
chr7 (7-110)||(24320076-24320179)
chr7 (3-102)||(27535601-27535700)
chr7 (3-102)||(39532824-39532923)
chr7 (1-110)||(36579188-36579297)
chr7 (1-110)||(36719399-36719508)
chr7 (8-97)||(43847248-43847337)
chr7 (5-107)||(2622760-2622862)
chr7 (8-110)||(15674465-15674567)
chr7 (1-98)||(5684541-5684638)
chr7 (1-98)||(5709591-5709688)
chr7 (5-110)||(6667560-6667665)
chr7 (1-110)||(32740917-32741026)
chr7 (1-102)||(40761761-40761862)
chr7 (1-86)||(44482720-44482805)
chr7 (2-97)||(21954672-21954761)
chr7 (1-99)||(15017222-15017321)
chr7 (38-110)||(29352391-29352463)
chr7 (1-73)||(32643170-32643242)
chr7 (38-110)||(38277009-38277081)
chr7 (8-110)||(22747363-22747465)
chr7 (38-102)||(4621251-4621315)
chr7 (53-109)||(27050362-27050418)
chr7 (38-96)||(10623977-10624035)
chr7 (1-97)||(14657704-14657794)
chr7 (50-107)||(25531620-25531677)
chr7 (1-98)||(9137133-9137224)
chr7 (1-38)||(17222306-17222343)
chr7 (38-110)||(5238118-5238190)
chr7 (41-109)||(25112678-25112746)
chr7 (179-226)||(28664966-28665014)
chr7 (179-226)||(45482083-45482131)
chr7 (41-96)||(6496071-6496126)
chr7 (3-38)||(40476938-40476973)
chr7 (39-109)||(32116467-32116537)
chr7 (61-110)||(37593284-37593333)
chr7 (41-110)||(37714644-37714713)
chr7 (2-38)||(2532172-2532208)
chr7 (179-218)||(21603489-21603529)
chr7 (179-218)||(27535483-27535523)
chr7 (179-218)||(32740780-32740820)
chr7 (61-101)||(38273076-38273116)
chr7 (179-218)||(42644703-42644743)
[»] chr5 (49 HSPs)
chr5 (1-110)||(2555197-2555306)
chr5 (1-110)||(6635413-6635522)
chr5 (1-109)||(23428418-23428526)
chr5 (1-107)||(7771668-7771774)
chr5 (1-110)||(6281209-6281318)
chr5 (1-108)||(23881963-23882070)
chr5 (5-107)||(17732237-17732339)
chr5 (2-96)||(42609323-42609417)
chr5 (1-110)||(32347561-32347670)
chr5 (1-110)||(33164316-33164424)
chr5 (3-102)||(3740530-3740629)
chr5 (1-110)||(11734666-11734775)
chr5 (14-110)||(980889-980985)
chr5 (7-110)||(3079187-3079290)
chr5 (7-110)||(20483351-20483454)
chr5 (3-102)||(39179677-39179776)
chr5 (1-110)||(17331493-17331602)
chr5 (1-102)||(18653955-18654056)
chr5 (1-110)||(26294904-26295013)
chr5 (1-110)||(42396360-42396468)
chr5 (7-110)||(17096094-17096197)
chr5 (3-98)||(27241241-27241336)
chr5 (7-110)||(29097954-29098057)
chr5 (3-102)||(43494033-43494132)
chr5 (1-110)||(11858075-11858182)
chr5 (1-102)||(177951-178051)
chr5 (1-95)||(17699733-17699827)
chr5 (1-107)||(28040797-28040903)
chr5 (1-102)||(12439510-12439611)
chr5 (1-109)||(6681723-6681831)
chr5 (1-108)||(34431227-34431331)
chr5 (1-96)||(39531259-39531352)
chr5 (7-96)||(35402214-35402301)
chr5 (1-102)||(39915666-39915761)
chr5 (1-109)||(25962085-25962187)
chr5 (53-107)||(12891844-12891898)
chr5 (38-110)||(17523406-17523478)
chr5 (38-101)||(12215307-12215369)
chr5 (1-99)||(17687381-17687473)
chr5 (1-102)||(7150984-7151079)
chr5 (8-110)||(42512843-42512939)
chr5 (179-227)||(43493890-43493939)
chr5 (56-110)||(35275888-35275942)
chr5 (179-216)||(39179882-39179920)
chr5 (48-93)||(39531631-39531676)
chr5 (1-38)||(40565003-40565040)
chr5 (2-38)||(6074583-6074619)
chr5 (50-94)||(32309345-32309389)
chr5 (52-96)||(34906332-34906376)
[»] scaffold1350 (1 HSPs)
scaffold1350 (6-110)||(1739-1843)
[»] scaffold0155 (2 HSPs)
scaffold0155 (3-109)||(35250-35356)
scaffold0155 (179-225)||(35102-35149)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-95)||(74344-74438)
scaffold0056 (179-218)||(74191-74231)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-110)||(3914-4023)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-99)||(3076-3174)
[»] scaffold1379 (2 HSPs)
scaffold1379 (28-107)||(143-222)
scaffold1379 (1-102)||(936-1031)
[»] scaffold0312 (2 HSPs)
scaffold0312 (8-110)||(6302-6404)
scaffold0312 (179-226)||(6156-6204)
[»] scaffold0321 (1 HSPs)
scaffold0321 (38-102)||(7008-7072)
[»] scaffold0001 (1 HSPs)
scaffold0001 (38-98)||(404139-404198)
[»] scaffold0999 (1 HSPs)
scaffold0999 (38-79)||(1900-1941)
[»] scaffold0007 (1 HSPs)
scaffold0007 (39-96)||(201936-201993)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-38)||(11245-11282)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-38)||(105271-105307)


Alignment Details
Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 226 - 381
Target Start/End: Complemental strand, 51417976 - 51417820
Alignment:
Q  226 gaagaagaagaaagggacgacagctaggatttgagaaaaggataagagagaactaagttcaattactatactaattcatcaaaatattctttttatt-ta 324  Q
    ||||||||||||||||| ||| | |||| ||||||||   ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  51417976 gaagaagaagaaagggatgacggttagggtttgagaaggagataagagagaactaagttcaattagtatactaattgatcaaaatattctttttattgta 51417877  T
Q  325 agatataataacatttcatcatctgattatttgattatatttttacacaatgatatt 381  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  51417876 agatataataacatttcatcatataattatttgattatatttttacacaatgatatt 51417820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51418258 - 51418149
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  51418258 tctccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttccacctgaatcaaataaacaccgc 51418159  T
Q  101 acaaagacgg 110  Q
    ||||||||||    
T  51418158 acaaagacgg 51418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45750752 - 45750643
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  45750752 tctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaacaccgc 45750653  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  45750652 actaagacgg 45750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32784353 - 32784244
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  32784353 tctccggatctgcaacgttgacgacgctaaagtcattgttattgatcgaatttgcacttgctcaaagctaatctttcagcctgaatcaaataaacaccgc 32784254  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  32784253 actaagacgg 32784244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44517422 - 44517312
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaa-gtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||| ||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  44517422 tctccggatctgcaacgttgacgacgccaaaagtcattgtcattgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccg 44517323  T
Q  100 cacaaagacgg 110  Q
    ||| |||||||    
T  44517322 cactaagacgg 44517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14265558 - 14265449
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||  ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  14265558 tctccggatctgcaacgttgacaacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgc 14265459  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  14265458 actaagacgg 14265449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15391099 - 15391208
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  15391099 tctccagatctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgc 15391198  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  15391199 actaagacgg 15391208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29205559 - 29205450
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| || | ||||||||||||||| ||| |||||| ||||| |||||||||||||    
T  29205559 tctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctgatcattcaacctgaatcaaataaacaccgc 29205460  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  29205459 actaagacgg 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4882206 - 4882313
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || | |||||||||| |||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  4882206 tctccggatctgcaacgttgacgatgccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgc 4882305  T
Q  101 acaaagac 108  Q
    || |||||    
T  4882306 actaagac 4882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4870880 - 4870986
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| || |||||||||||||||||||| ||||||  ||||| |||||||||||||    
T  4870880 tctccggatctacaacgttgacgacgccgaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaatctgaatcaaataaacaccgc 4870979  T
Q  101 acaaaga 107  Q
    || ||||    
T  4870980 actaaga 4870986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 7995414 - 7995516
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||    
T  7995414 atctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccacactaaga 7995513  T
Q  108 cgg 110  Q
    |||    
T  7995514 cgg 7995516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42276629 - 42276523
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||||||||| |||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  42276629 tctccgaatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgc 42276530  T
Q  101 acaaaga 107  Q
    || ||||    
T  42276529 actaaga 42276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3233062 - 3232953
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||||||| |||    
T  3233062 tctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacatcgc 3232963  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  3232962 actaagacgg 3232953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 13488395 - 13488492
Alignment:
Q  13 caacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| |||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  13488395 caacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaattaaataaacaccgcactaagacgg 13488492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10627273 - 10627173
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  10627273 tctccgaatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatc-ttcaacctgaatcaaataaacaccgc 10627175  T
Q  101 ac 102  Q
    ||    
T  10627174 ac 10627173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18343886 - 18343778
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||||| |||| | ||||||||||||    
T  18343886 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaa-tcaataaacaccgc 18343788  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  18343787 actaagacgg 18343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45193475 - 45193584
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||| |||||||||||||||| ||  ||||||||||||||||||||||||||| ||| | ||||||||||||     
T  45193475 tctccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatcagcacttgctcaaagctaatctttcaacctgattcaaataaacaccgt 45193574  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  45193575 actaagacgg 45193584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28677984 - 28678078
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    |||| ||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  28677984 atctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcac 28678078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 29726456 - 29726553
Alignment:
Q  13 caacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||| || |||||||||||  |||||||    
T  29726456 caacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcagagctaatctttcaacctgaatcaattaaacaccgcattaagacgg 29726553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 17347844 - 17347762
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||| |||||||||| |||| |||||||    
T  17347844 caaagtcattgtcattgatcgaatctgcacttactcaaagctaatctttcaaccttaatcaaataaacactgcactaagacgg 17347762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 33486881 - 33486986
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| |||| |||| |||  ||||| ||||||||||||||| ||||||| |||||||||| |||| ||||||| ||||| ||||||||||||||| |    
T  33486881 cggatctgcaacattgacgacaccaaagccattgtcattgatcggatttgcatttgctcaaagttaatttttcaacctgaatcaaataaacaccgcacta 33486980  T
Q  105 agacgg 110  Q
    ||||||    
T  33486981 agacgg 33486986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33938860 - 33938969
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||| | || || ||||||||||||||||||||||||| | ||  |||||| ||||||    
T  33938860 tctccggatctggaacgttgacgacgacaaagtcattgtcattgattggatctgtacttgctcaaagctaatctttcaacctaaaccaaataagcaccgc 33938959  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  33938960 actaagacgg 33938969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37822193 - 37822301
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||| ||||||||||||||| || ||||||||||||||| |||||||||||| ||||| ||||||| || ||    
T  37822193 tctccggatctgcaacgttgacgacaccaaagacattgtcattgatcggatctgcacttgctcaaag-taatctttcaacctgaatcaaataaatactgc 37822291  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  37822292 actaagacgg 37822301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32878976 - 32878873
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| |||  |||||||||||      |||| || |||||||||||||||||||||||||||| ||||| ||||||||||||     
T  32878976 tctccggatctacaacgttgacgacaccaaagtcattg------atcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgt 32878883  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  32878882 actaagacgg 32878873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27534971 - 27534862
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| ||||  ||||||||||| |||||||  || ||| |||| ||||||||||||||||||| ||||| ||||||||| | |    
T  27534971 tctccggatctgcaacgttgacgacgctaaagtcattgttattgatcagatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacatcac 27534872  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  27534871 actaagacgg 27534862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 15791128 - 15791223
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||| ||||||||| || | |||||||||||||||||||   ||||||| ||  ||||||||||||||||||| ||||| |||||||||||||||    
T  15791128 gatctgcaacgttgacgatgccaaagtcattgtcattgataagatttgcatttcttcaaagctaatctttcaacctgaatcaaataaacaccgcac 15791223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 51418080 - 51418022
Alignment:
Q  179 tatgtgaaatcacttttcaattagaatagaaggaaaaacagctcggagaagaagaagaa 237  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||    
T  51418080 tatgtgaaatcacttttcaattaggatagaaggaaaaacaactcagagaagaagaagaa 51418022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 9298300 - 9298369
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||||| || ||||||||||||||| |||||||||||| ||||| ||||||||||||||| ||||    
T  9298300 gtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaaga 9298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 12871858 - 12871789
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||| ||||| ||||    
T  12871858 gtcattgatcgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaacgcactaaga 12871789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 42491130 - 42491059
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||||  || |||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||    
T  42491130 gtcattgatctgatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagacg 42491059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 28399213 - 28399276
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    ||||||||| | || |||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  28399213 gtcattgattggatctgcacttgctcaaagctaatatttcaacatgaatcaaataaataccgca 28399276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 50107797 - 50107871
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagcta--atctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| ||||||||||||| |||||||||  || ||||||||| ||| ||||||||||||||| |||||||    
T  50107797 gtcattgattgaatttgcacttgatcaaagctataatttttcaacataaatcaaataaacaccgcactaagacgg 50107871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 424145 - 424247
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| ||||||||| |||| | ||  |||||||||||||||||| ||||||||  ||||| |||||||||||| |  || |||||||||||| || ||||    
T  424145 atctgcaacgttgacgacgcctaacccattgtcattgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaaga 424244  T
Q  108 cgg 110  Q
    |||    
T  424245 cgg 424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 20411786 - 20411737
Alignment:
Q  61 ctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  20411786 ctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 20411737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 25032972 - 25033032
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    ||||||||| |||||||||||||||||||| ||||||  |||| ||||| |||||||||||    
T  25032972 gtcattgattgaatttgcacttgctcaaagttaatctcacaacctgaatcaaataaacacc 25033032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 31427037 - 31427101
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaa 105  Q
    |||||| ||| ||||||||| |||||| |||||||||||| ||||| |||||||||| |||||||    
T  31427037 attgattgaagttgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcacaaa 31427101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 47551361 - 47551268
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| ||||||||||||||||      || | || |||||||||||||||||||||||||||| | ||| || ||||||| ||||    
T  47551361 tccggatctgcaacgttgacgacgtcaaagtcattg------attggatctgcacttgctcaaagctaatctttcaacctaaatcaattaaacacagcac 47551268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 8737572 - 8737517
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagac 108  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||| |||| |||||    
T  8737572 tgcacttactcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 8737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 10304815 - 10304744
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||| |||| | ||||| |||||||||||| ||||||| ||||| ||||||||||| ||| ||||||    
T  10304815 gtcattgattgaatctccactttctcaaagctaatatttcaacttgaatcaaataaacaccacactaagacg 10304744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 26097889 - 26097960
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    |||||| || |||| |||||||||||||||||||| ||||||| ||||| ||||||| |||| || ||||||    
T  26097889 gtcattaatggaatctgcacttgctcaaagctaatttttcaacctgaatcaaataaataccgtactaagacg 26097960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 39080799 - 39080870
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    |||| |||| |||| | |||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||||    
T  39080799 gtcactgattgaatctacacttgctcaaaactaatcttttaacatgaatcaaataaacactgcactaagacg 39080870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 20413093 - 20413051
Alignment:
Q  23 gacgtcaaagtcattgtcattgatcgaatttgcacttgctcaa 65  Q
    |||||||||||||||||||||||||| || |||||||||||||    
T  20413093 gacgtcaaagtcattgtcattgatcggatctgcacttgctcaa 20413051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 32301558 - 32301512
Alignment:
Q  55 cacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  32301558 cacttgatcaaagctaatctttcaacctgaatcaaataaacaccgca 32301512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8893561 - 8893524
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  8893561 tctccggatctacaacgttgacgacgtcaaagtcattg 8893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 13869875 - 13869802
Alignment:
Q  37 tgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||| | || | |||||| ||||| ||||||||||||| | ||| ||||||||||||||| |||||||    
T  13869875 tgtcattgattggatctacacttgttcaaaactaatctttcaacctaaatcaaataaacaccgcactaagacgg 13869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 424345 - 424393
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  424345 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 424393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 14265351 - 14265303
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||||    
T  14265351 tatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggag 14265303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 24114563 - 24114626
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    ||||||||| |||| |||||||||| ||  ||||||||||||| ||||| ||||||||| ||||    
T  24114563 gtcattgattgaatctgcacttgctaaacactaatctttcaacttgaatcaaataaacatcgca 24114626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 45425389 - 45425423
Alignment:
Q  68 ctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  45425389 ctaatctttcaacatgaataaaataaacaccgcac 45425423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 900361 - 900324
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  900361 tctctggatctacaacgtggatgacgtcaaagtcattg 900324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6212760 - 6212797
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  6212760 tctccggatctacaacgtggatgacgccaaagtcattg 6212797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 7995614 - 7995663
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggaga 227  Q
    ||||||||||||||| ||||||||| |||||||||||||||  |||||||    
T  7995614 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaga 7995663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 13152677 - 13152636
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaa 79  Q
    ||||||||||| || ||||||||||||||| |||||||||||    
T  13152677 gtcattgatcggatctgcacttgctcaaagttaatctttcaa 13152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13969486 - 13969523
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  13969486 tctccggatctgcaacgttgacgacgtcaaagtcattg 13969523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 29802863 - 29802794
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||| | || |||||||| ||||| ||| |||||||||| |||| ||||||||||| ||| ||||    
T  29802863 gtcattgattggatctgcacttgatcaaaactactctttcaacaagaatcaaataaacaccacactaaga 29802794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 45659278 - 45659245
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||||||| |||||||||||||||||||    
T  45659278 cggatctacaacgtagatgacgtcaaagtcattg 45659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2486180 - 2486144
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcatt 37  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  2486180 tctccggatctgcaacgttgatgacgtaaaagtcatt 2486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 3101904 - 3101840
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    |||||| || |||| ||||||||||||||| |||| |||||||  |||| ||||||||| |||||    
T  3101904 gtcattaattgaatatgcacttgctcaaagttaatatttcaactcgaatcaaataaacatcgcac 3101840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 10599116 - 10599052
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| | ||| ||| ||| || || ||||||||||||||||||| || ||||||||||||    
T  10599116 gtcattgattggattcgcaattgatcgaaactaatctttcaacatgaatgaattaaacaccgcac 10599052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 25689725 - 25689785
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    ||||||||| |||| ||| ||| | |||||||||||| ||||| ||||| |||||||||||    
T  25689725 gtcattgattgaatatgcgctttcccaaagctaatctatcaacctgaataaaataaacacc 25689785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 29069725 - 29069785
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    ||||||||| |||| |||||||| |||||  |||||||||||  ||||| |||||||||||    
T  29069725 gtcattgattgaatatgcacttgatcaaaattaatctttcaatctgaatcaaataaacacc 29069785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 29938474 - 29938411
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| | || |||||||| |||| |||| ||||||||||| ||| |||||||||||||||    
T  29938474 gtcattgattggatctgcacttgatcaa-gctattctttcaacataaatcaaataaacaccgcac 29938411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 37822399 - 37822439
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  37822399 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 37822439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35333779 - 35333670
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| |||||||||||||    
T  35333779 tctccggatctgcaacgttgatgacgtcaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 35333680  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  35333679 actaagacgg 35333670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10286854 - 10286963
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  10286854 tctccggatctgcaacgttgacaacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 10286953  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  10286954 actaagacgg 10286963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9978516 - 9978625
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||| | || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  9978516 tctccggatctgcaacgttgatgacgccaaaatcattgtcattgattggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 9978615  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  9978616 actaagacgg 9978625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38384304 - 38384413
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| |||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  38384304 tctccggatctgcaatgttgatgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaataaaataaacaccgc 38384403  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  38384404 actaagacgg 38384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 44942556 - 44942451
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |    
T  44942556 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcacta 44942457  T
Q  105 agacgg 110  Q
    ||||||    
T  44942456 agacgg 44942451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4739603 - 4739496
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  4739603 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgc 4739504  T
Q  101 acaaagac 108  Q
    || |||||    
T  4739503 actaagac 4739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29543067 - 29542957
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaat-aaacaccg 99  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| |||| ||||||||    
T  29543067 tctccggatctgcaacgttgatgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaaacaccg 29542968  T
Q  100 cacaaagacgg 110  Q
    ||| |||||||    
T  29542967 cactaagacgg 29542957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18089244 - 18089353
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||| ||| || | ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18089244 tctccggatctgcaacgctgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgc 18089343  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  18089344 actaagacgg 18089353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32314716 - 32314607
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||| |||||||||||||  || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  32314716 tctccggatctgcaacgttgacgacgccaaagttattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 32314617  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  32314616 actaagacgg 32314607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33012322 - 33012213
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||| | ||||||||| |||| |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33012322 tctccggatatgcaacgttgacgacgccaaaatcattgtcgttgatcggatttgcacttgatcaaagctaatctttcaacctgaattaaataaacaccgc 33012223  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  33012222 actaagacgg 33012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36868282 - 36868174
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| |||| |||||||||||||||||| || |||||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  36868282 tctcctgatctgcaacgttgacgacgccaaagtcattgtcattgaacggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgc 36868183  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  36868182 actaagacg 36868174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31908664 - 31908770
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  31908664 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaa-ctttcaacctgaatcaaataaacaccgc 31908762  T
Q  101 acaaagac 108  Q
    || |||||    
T  31908763 actaagac 31908770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4732344 - 4732235
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||||||| || | ||||||||||||| |||||||||||| ||||| |||||||||||||    
T  4732344 tctccggatctgcaacgttgacgacgctaaagtcattgtcattgatcggatctacacttgctcaaagataatctttcaacttgaatcaaataaacaccgc 4732245  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  4732244 actaagacgg 4732235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28230944 - 28231053
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||| ||||| |||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  28230944 tctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgc 28231043  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  28231044 actaagacgg 28231053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 34962927 - 34963032
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| ||||||||||||||||||| | || |||||||||||||| ||||||||||||| ||||| ||||||||||||||| |    
T  34962927 cggatctgcaacgttgacgacgccaaagtcattgtcattgataggatctgcacttgctcaaatctaatctttcaacctgaatcaaataaacaccgcacta 34963026  T
Q  105 agacgg 110  Q
    ||||||    
T  34963027 agacgg 34963032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43473975 - 43474084
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||| ||||| |||| ||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  43473975 tctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 43474074  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  43474075 actaagacgg 43474084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34416610 - 34416702
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataa 93  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||    
T  34416610 tctccggatctgcaatgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataa 34416702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 43696138 - 43696035
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| |||||||||||||| ||||||||||||||||||||  || |||||||| ||||||||||| ||||||| ||||| ||||||||||||||| |    
T  43696138 cggatctgcaacgttgatgacgccaaagtcattgtcattgatcagatctgcacttgttcaaagctaatttttcaacctgaatcaaataaacaccgcacta 43696039  T
Q  105 agac 108  Q
    ||||    
T  43696038 agac 43696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 13878859 - 13878953
Alignment:
Q  4 ccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||    
T  13878859 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacacc 13878953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 14018984 - 14019078
Alignment:
Q  4 ccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||    
T  14018984 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacacc 14019078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20560979 - 20561085
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||||| || | | |||||||||||||||||||||||| ||||| |||||||||||||    
T  20560979 tctccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctactcttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 20561078  T
Q  101 acaaaga 107  Q
    || ||||    
T  20561079 actaaga 20561085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9689832 - 9689933
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| | ||| |||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  9689832 tctccggatctgcaatgctgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgc 9689931  T
Q  101 ac 102  Q
    ||    
T  9689932 ac 9689933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 17267977 - 17268082
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||| ||| ||||| |||||| |||| |||||    
T  17267977 cggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaattttttaacctgaatcaaataatcaccacacaa 17268076  T
Q  105 agacgg 110  Q
    | ||||    
T  17268077 aaacgg 17268082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22597409 - 22597300
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| |||| |||| || |||||||||||| |||||||||| |  |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22597409 tctctggatctgcaacattgacgatgtcaaagtcattatcattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 22597310  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  22597309 actaagacgg 22597300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27095980 - 27095879
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||| ||  | ||||||||||||||||||||||||| ||||| ||||||||| |||    
T  27095980 tctccggatctgcaacgttgatgacgctaaagtcattgtcattgatcggatcagtacttgctcaaagctaatctttcaacttgaatcaaataaacatcgc 27095881  T
Q  101 ac 102  Q
    ||    
T  27095880 ac 27095879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28261735 - 28261844
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| ||||  ||||| |||||||||||||| || ||| |||||||||| ||||||||||||| ||||| |||||||||||||    
T  28261735 tctccggatctgcaacgttgacgacgcgaaagttattgtcattgatcggatctgctcttgctcaaaactaatctttcaacctgaatcaaataaacaccgc 28261834  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  28261835 actaagacgg 28261844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13740507 - 13740615
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||| | || || ||||| ||||||||||||||||||| ||||| ||||||||| |||    
T  13740507 tctccggatctgcaacgttgacgacgtcaaagtaattgtcattgattggatctgtacttgttcaaagctaatctttcaacctgaatcaaataaacatcgc 13740606  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  13740607 actaagacg 13740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 4426507 - 4426614
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| || |  ||||| ||||||||| |||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  4426507 tccggatctgcaacgttgacgatgataaagttattgtcatttatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 4426606  T
Q  103 aaagacgg 110  Q
     |||||||    
T  4426607 taagacgg 4426614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7072795 - 7072902
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||| | |||||||||| |||||| ||||| |||| || ||||| |||||||||||||    
T  7072795 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgattggatttgcacttcctcaaaactaatatttcgacctgaatcaaataaacaccgc 7072894  T
Q  101 acaaagac 108  Q
    || |||||    
T  7072895 actaagac 7072902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 12890971 - 12891066
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||||||| |||  |||||  |||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  12890971 gatctacaacgttgacgacaccaaagaaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 12891066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 38535158 - 38535253
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||| ||||||||| |||  ||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  38535158 gatctgcaacgttgacgacaccaaagtcattgtcatggatcgaacctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 38535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12704961 - 12704852
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| || |||||| |||| |||||||||||| |||||||  || |||||||||||||||||||||||||||| | ||| |||||||||||||    
T  12704961 tctccgaatctgcagcgttgacgacgccaaagtcattgtgattgatctgatatgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgc 12704862  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  12704861 actaagacgg 12704852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25068124 - 25068017
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||  ||| ||||||||||||||||||| ||||| ||||||||| |||    
T  25068124 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcgaatctgc-tttgttcaaagctaatctttcaacctgaatcaaataaaca-cgc 25068027  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  25068026 actaagacgg 25068017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 4604159 - 4604263
Alignment:
Q  7 gatctacaacgttgatgacgtcaaa-gtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaa 105  Q
    ||||| ||||||||| || |||||| ||||||||||||||||| || |||||||||||||||||| ||||||||| ||||| ||||||||||| ||| ||    
T  4604159 gatctgcaacgttgacgaagtcaaaagtcattgtcattgatcggatctgcacttgctcaaagctagtctttcaacctgaatcaaataaacaccacactaa 4604258  T
Q  106 gacgg 110  Q
    |||||    
T  4604259 gacgg 4604263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 20124653 - 20124722
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||    
T  20124653 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatgaaataaacaccacactaaga 20124722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32015527 - 32015418
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| || | ||||||||||| ||||||||| || |||||||||||||| ||||||||||||| ||||| ||||||||| ||     
T  32015527 tctccagatctgcaacgttgacgatgccaaagtcattgacattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacatcgt 32015428  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  32015427 actaagacgg 32015418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 5754525 - 5754454
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  5754525 gtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 5754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 41797861 - 41797759
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| || | |||||||||||||||||| || || |||||||||||||||||||||||   || ||||| ||||||||||| ||| |    
T  41797861 cggatctgcaacgttgacgatgccaaagtcattgtcattgaacggatctgcacttgctcaaagctaatctt---acctgaatcaaataaacaccacacta 41797765  T
Q  105 agacgg 110  Q
    ||||||    
T  41797764 agacgg 41797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 7581944 - 7582029
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    ||||||||||||||||| |||||||||||| |||      || |||||||||||||||||||| |||| ||||||| ||||| |||||||||    
T  7581944 cggatctacaacgttgacgacgtcaaagtcgttg------attgaatttgcacttgctcaaagataatatttcaacctgaatcaaataaaca 7582029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 11798407 - 11798479
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||| || | ||| |||||||||||||||||||||| ||||| ||||||||| ||||| |||||||    
T  11798407 gtcattgatcggatctacacctgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacgg 11798479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 34471203 - 34471139
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| | || ||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  34471203 gtcattgattggatctgcacttgctcaaagttaatctttcaacatgaatcaaataaataccgcac 34471139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 823845 - 823914
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||| |||| || ||||||||||||||||| ||||||  ||||| ||||||||||||||| |||||||    
T  823845 attgattgaatctgaacttgctcaaagctaatttttcaatctgaatcaaataaacaccgcactaagacgg 823914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 11937718 - 11937814
Alignment:
Q  13 caacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| ||||  || |||||||||| |||||| || |||||||||||||  ||||||||||||| | ||| ||||||||| ||||| |||||||    
T  11937718 caacgttgacgacgctaaggtcattgtcactgatcggatctgcacttgctcaatactaatctttcaacct-aatcaaataaacaacgcactaagacgg 11937814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 8531447 - 8531515
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||| ||||||||||||| | |||| || ||||| ||||||||| ||||||||||||||| ||||    
T  8531447 tcattgattgaatttgcacttgattaaagttattctttaaacatgaatcaaataaacaccgcactaaga 8531515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 26254834 - 26254890
Alignment:
Q  52 ttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagac 108  Q
    |||||||||||||||| |||||||||||| | ||| ||||||||||||||| |||||    
T  26254834 ttgcacttgctcaaagttaatctttcaacctaaatcaaataaacaccgcactaagac 26254890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 40039192 - 40039264
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| |||| |||||||| ||||  ||||| ||||||| ||||| ||||||||||||||| |||||||    
T  40039192 gtcattgattgaatctgcacttgatcaatactaatttttcaacctgaataaaataaacaccgcactaagacgg 40039264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 11581015 - 11581078
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    |||||||| ||||||||||||| | ||| ||||||||||||| ||||| ||||||| |||||||    
T  11581015 tcattgattgaatttgcacttgatgaaacctaatctttcaacctgaatcaaataaataccgcac 11581078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 13548785 - 13548848
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    ||||||||| |||| |||| ||| ||||||||||||||||||| ||||| ||||||| ||||||    
T  13548785 gtcattgattgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaaaaccgca 13548848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 15920111 - 15920052
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    ||||||||||| || ||||||||| |||||||||| ||||||| ||||| ||||||||||    
T  15920111 gtcattgatcggatctgcacttgcacaaagctaatatttcaacctgaatcaaataaacac 15920052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 17792711 - 17792652
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    ||||||||| |||| |||| ||| ||||| ||||||||||||||||||| ||||||||||    
T  17792711 gtcattgattgaatctgcatttgatcaaaactaatctttcaacatgaatcaaataaacac 17792652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11942642 - 11942584
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcactt 59  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||||||||| || |||||||    
T  11942642 tctccagatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcactt 11942584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 12994098 - 12994167
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    |||||||| |||||||||||| ||||||||||||||||||||  |||| |||||||||  |||| ||||||    
T  12994098 tcattgatggaatttgcactt-ctcaaagctaatctttcaactagaatcaaataaacattgcactaagacg 12994167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 4604361 - 4604406
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcg 223  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4604361 tatgtgaaatcacttattcaattagaatagaaggaaaaacaactcg 4604406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 6431286 - 6431355
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||||  || ||| ||||||||||| |||||||||||| ||||| |||| |||||||||| ||||    
T  6431286 gtcattgatcagatctgcgcttgctcaaagttaatctttcaacctgaatcaaatcaacaccgcactaaga 6431355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 6510724 - 6510647
Alignment:
Q  33 tcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||| ||||||||| |||| |||||||  ||||||||||| ||||||| ||||| |||||||||  |||| |||||||    
T  6510724 tcatagtcattgattgaatatgcacttattcaaagctaatttttcaacttgaatcaaataaacattgcactaagacgg 6510647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 27095772 - 27095724
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  27095772 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 27095724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 27666447 - 27666375
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| |||| |||||||  |||||  |||||||| ||| ||||| ||||||||||||||| |||||||    
T  27666447 gtcattgattgaatatgcacttcatcaaaattaatcttttaacctgaatcaaataaacaccgcactaagacgg 27666375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 33012144 - 33012104
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  33012144 tatgtgaaatcacttattcaattagaatagaaggaaaaaca 33012104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 8781765 - 8781719
Alignment:
Q  62 tcaaagctaatctttcaacatgaattaaataaacaccgcacaaagac 108  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| |||||    
T  8781765 tcaaagctaatcttttaacttgaatcaaataaacaccgcactaagac 8781719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 45694345 - 45694391
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    |||| |||||||||| |||||||||||||||| | ||||||||||||    
T  45694345 tgcatttgctcaaagataatctttcaacatgagtcaaataaacaccg 45694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 11426865 - 11426824
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaa 94  Q
    |||| ||||||||||||||||||||||| ||||| |||||||    
T  11426865 tgcaattgctcaaagctaatctttcaacttgaatgaaataaa 11426824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 17268178 - 17268223
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcg 223  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  17268178 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcg 17268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 17767444 - 17767505
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||| || ||||||||||||||| |||||||| ||| | ||| |||||| |||||    
T  17767444 gtcattgatcggatctgcacttgctcaaagttaatcttttaacctaaatcaaataagcaccg 17767505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 9690027 - 9690075
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| ||||||    
T  9690027 tatgtgagatcacttattcaattaggatagaaggaaaaacagttcggag 9690075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 15919941 - 15919893
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    |||||||||||| || ||||||||| ||||||||||||||| |||||||    
T  15919941 tatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggag 15919893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 22597202 - 22597154
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| || |||||| ||||||||||||||| |||||||    
T  22597202 tatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggag 22597154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 25067919 - 25067879
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  25067919 tatgtgaaatcacttattcaattaaaatagaaggaaaaaca 25067879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 35353907 - 35353871
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35353907 ctccggatctgcaacgttgatgacgccaaagtcattg 35353871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 43697001 - 43696937
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatg-aattaaataaacaccgca 101  Q
    ||||||||| ||||||||||||  ||||| ||||| |||||||||| |||  |||||||||||||    
T  43697001 gtcattgattgaatttgcacttaatcaaaactaatttttcaacatgaaatcgaataaacaccgca 43696937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 35219762 - 35219869
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  35219762 tccggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcac 35219861  T
Q  103 aaagacgg 110  Q
     |||||||    
T  35219862 taagacgg 35219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23101255 - 23101364
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  23101255 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaataccgc 23101354  T
Q  101 acaaagacgg 110  Q
    ||||||||||    
T  23101355 acaaagacgg 23101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15589955 - 15590064
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||| |||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  15589955 tctccggatctgcaacattgacgacgccaaagccattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 15590054  T
Q  101 acaaagacgg 110  Q
    |  |||||||    
T  15590055 attaagacgg 15590064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23654524 - 23654415
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||||| ||||| |||||||||||||    
T  23654524 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgc 23654425  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  23654424 actaagacgg 23654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31937267 - 31937376
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  31937267 tctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgc 31937366  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  31937367 actaagacgg 31937376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31705439 - 31705331
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  31705439 tctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgc 31705340  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  31705339 actaagacg 31705331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1106714 - 1106823
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||| ||||||||| ||     
T  1106714 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgt 1106813  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  1106814 actaagacgg 1106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2304685 - 2304794
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||  | | ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  2304685 tctccggatctgcaacgttgacaatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgc 2304784  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  2304785 actaagacgg 2304794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8693501 - 8693610
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  8693501 tctccggatctgcaacgttgacgacaccaaagtcattgtccttgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgc 8693600  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  8693601 actaagacgg 8693610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23637967 - 23638076
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||| |||| ||||||||||||||||||||| || | ||  ||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  23637967 tctccggatctgcaacattgacgacgtcaaagtcattgtcatttattggatcagcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 23638066  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  23638067 actaagacgg 23638076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12481217 - 12481326
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||||||| |||||||||| || ||| |||| |||||| |||||||||||| | ||| |||||||||||||    
T  12481217 tctccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgc 12481316  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  12481317 actaagacgg 12481326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4394044 - 4393938
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||||||||||| |||||  || |||||||| |||||| |||||||||||| ||| | |||||||||||||    
T  4394044 tctccggatctgcaacgttgacgacgccaaagtcattgtcagtgatcagatctgcacttgatcaaagttaatctttcaacctgagtcaaataaacaccgc 4393945  T
Q  101 acaaaga 107  Q
    || ||||    
T  4393944 actaaga 4393938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21507684 - 21507793
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||||| ||   ||||||||||||| |||||||||||| ||||| ||| | |||||||    
T  21507684 tctccggatctgtaacgttgacgacgccaaagtcattgtcattgatcggatcgacacttgctcaaagttaatctttcaacctgaatcaaaaacacaccgc 21507783  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  21507784 actaagacgg 21507793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 14782990 - 14783098
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||  || |||||||||||||| ||||||||||||  | ||| ||||| ||||| ||    
T  14782990 ctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcacatctgcacttgctcaaaactaatctttcaatctaaatcaaatatacaccaca 14783089  T
Q  102 caaagacgg 110  Q
    | |||||||    
T  14783090 ctaagacgg 14783098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29920764 - 29920862
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||| |||||  |||||||| ||||  |||||||||||||||||||||||   ||||| |||||||||||||||||||| | ||| ||||||||||||    
T  29920764 tctccagatctgtaacgttgacgacgataaagtcattgtcattgatcgaatcaacacttactcaaagctaatctttcaacctaaatcaaataaacaccg 29920862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6419705 - 6419814
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||| |||| |||| ||||||||||||||| ||| |  | ||||||| |||||||||||||||||||| ||||  |||||||||  ||    
T  6419705 tctccggatctgcaactttgacgacgccaaagtcattgtcatcgattgggtctgcacttactcaaagctaatctttcaacctgaaccaaataaacattgc 6419804  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  6419805 actaagacgg 6419814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 19402709 - 19402766
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  19402709 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 19402766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 4921765 - 4921837
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||| || |||||||||||||||||||||||||||| || || ||||||||||||||  |||||||    
T  4921765 gtcattgatcggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcagtaagacgg 4921837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 6296123 - 6296205
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||| |||||||||||||||| || |||| |||||||||| |||||||| ||| ||||| |||||||||| |||| |||||||    
T  6296123 caaaatcattgtcattgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaagacgg 6296205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 6302933 - 6303015
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||| |||||||||||||||| || |||| |||||||||| |||||||| ||| ||||| |||||||||| |||| |||||||    
T  6302933 caaaatcattgtcattgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaagacgg 6303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13871473 - 13871576
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||||||||      |||  ||||||||||||||||||| |||||| |||| ||||| |||||||||| ||    
T  13871473 tctccggatctgcaacgttgacgacgccaaagtcattg------atcagatttgcacttgctcaaagcaaatcttccaacctgaatcaaataaacactgc 13871566  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  13871567 actaagacgg 13871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30813340 - 30813267
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatct 74  Q
    ||||||||||| ||||||||| |||| |||||||||| |||||||||| || ||| |||| |||||||||||||    
T  30813340 tctccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagctaatct 30813267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 1915080 - 1915142
Alignment:
Q  48 gaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||||| ||| ||||||||||||||| ||||| |||||||||||| || |||||||    
T  1915080 gaatttgcacttgttcatagctaatctttcaacctgaatcaaataaacaccgtactaagacgg 1915142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 2488373 - 2488304
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagac 108  Q
    |||||||||| || | ||||||||||||| |||||||||||| ||||| | ||||||||||||| |||||    
T  2488373 tcattgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagac 2488304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 29284964 - 29284919
Alignment:
Q  64 aaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  29284964 aaagctaatctttcaacttgaatcaaataaacaccgcactaagacg 29284919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 16328952 - 16329011
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    |||||||||  ||||||||||| |||||| ||||||||||||| | ||| ||||||||||    
T  16328952 gtcattgattaaatttgcacttactcaaaactaatctttcaacctaaatcaaataaacac 16329011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 16338187 - 16338246
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    ||||||||| |||||||||| | |||||| ||||||||||||| | ||| ||||||||||    
T  16338187 gtcattgattgaatttgcacctactcaaaactaatctttcaacctaaatcaaataaacac 16338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12654156 - 12654259
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| |||||||||||||| |||||||||||      |||  || | |||||||||||| ||| ||||||||| | ||| ||||||||||| |    
T  12654156 tctccgaatctgcaacgttgatgacgccaaagtcattg------atcagatctacacttgctcaaaactagtctttcaacctaaatcaaataaacaccac 12654249  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  12654250 actaagacgg 12654259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 16339734 - 16339792
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    |||||||| |||||||||||| |||||| |||||||||||||   ||| ||||||||||    
T  16339734 tcattgattgaatttgcacttactcaaaactaatctttcaaccaaaatcaaataaacac 16339792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 1418981 - 1419042
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    |||||||||||||| | |||||||| ||| ||||||||||||  | ||| ||||||||||||    
T  1418981 gtcattgatcgaatctacacttgcttaaatctaatctttcaatctaaatcaaataaacaccg 1419042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 7076769 - 7076708
Alignment:
Q  48 gaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||||||| |||||| |||||||||||| || |  |||||||||| |||| ||||||    
T  7076769 gaatttgcacttgatcaaagttaatctttcaacttggaacaaataaacactgcactaagacg 7076708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 31801116 - 31801177
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||| ||||||||||||| ||||| ||||||||| |||  |||  |||||||||||||    
T  31801116 tcattgattgaatttgcacttgatcaaaactaatctttaaactcgaagcaaataaacaccgc 31801177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 3610230 - 3610298
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||| |||| ||||||||  |||||||||  ||||||| ||||| | ||||||||||||| ||||    
T  3610230 tcattgattgaatctgcacttgtccaaagctaacttttcaacctgaatcagataaacaccgcactaaga 3610298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 5527526 - 5527578
Alignment:
Q  55 cacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||| ||||||||||| ||||||| |||||||||||| || ||||| ||||    
T  5527526 cacttgttcaaagctaatatttcaacctgaattaaataatcatcgcactaaga 5527578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 6419912 - 6419952
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  6419912 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 6419952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 36124197 - 36124304
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  36124197 tccggatctgcaacgttgacaacgccaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 36124296  T
Q  103 aaagacgg 110  Q
     |||||||    
T  36124297 taagacgg 36124304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13965834 - 13965725
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||| || |||||||||||||||||||||||||||| | ||| |||||||||||||    
T  13965834 tctccggatctacaacgttgacgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgc 13965735  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  13965734 actaagacgg 13965725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20399750 - 20399859
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  20399750 tctccagatctgcaacgttgacgacgacaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaaactgaatcaaataaacaccgc 20399849  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  20399850 actaagacgg 20399859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24825923 - 24825814
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  24825923 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaagaccgc 24825824  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  24825823 actaagacgg 24825814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43244228 - 43244337
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || | ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  43244228 tctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacttgaatgaaataaacaccgc 43244327  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  43244328 actaagacgg 43244337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31522220 - 31522112
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||| |||||||||| ||    
T  31522220 tctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacactgc 31522121  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  31522120 actaagacg 31522112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7060597 - 7060488
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| |||||||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  7060597 tctctggatctgcaacgttgatgacgccaaagtaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 7060498  T
Q  101 acaaagacgg 110  Q
    |  |||||||    
T  7060497 attaagacgg 7060488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 32616707 - 32616815
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||||||| ||||||||| || | ||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  32616707 ctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgca 32616806  T
Q  102 caaagacgg 110  Q
    | |||||||    
T  32616807 ctaagacgg 32616815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22757368 - 22757261
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  22757368 tctccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 22757269  T
Q  101 acaaagac 108  Q
    || |||||    
T  22757268 actaagac 22757261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6882230 - 6882121
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||| |||||||||||||| || |||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  6882230 tctccggatctgcaacgttgacgacgacaaagttattgtcattgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaacaccgc 6882131  T
Q  101 acaaagacgg 110  Q
    |  |||||||    
T  6882130 attaagacgg 6882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38943995 - 38944104
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||  ||| ||||||||||||| ||||||| || |||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  38943995 tctccggatctgcaacgttgacaacgccaaagtcattgtccttgatcggatctgcacttgctcaaagctattctttcaacctgaatcaaataaacaccgc 38944094  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  38944095 actaagacgg 38944104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 39523680 - 39523575
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctc-aaagctaatctttcaacatgaattaaataaacaccgcaca 103  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||| ||||| |||||||||||||||     
T  39523680 cggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaaaactaatctttcaacctgaatcaaataaacaccgcact 39523581  T
Q  104 aagacg 109  Q
    ||||||    
T  39523580 aagacg 39523575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24100414 - 24100306
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||||||||| |    
T  24100414 tctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccac 24100315  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  24100314 actaagacg 24100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6911954 - 6911847
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||||| ||||| |||||||||| ||    
T  6911954 tctccggatctacaacattgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacactgc 6911855  T
Q  101 acaaagac 108  Q
    || |||||    
T  6911854 actaagac 6911847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 13586093 - 13586196
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| |||||||||  ||| |||| |||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||    
T  13586093 gatctgcaacgttgactacgccaaaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 13586192  T
Q  107 acgg 110  Q
    ||||    
T  13586193 acgg 13586196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 25658439 - 25658332
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||| | ||||||||| |||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  25658439 tccggatgtgcaacgttgacgacgccaaagtcattgtcgttgatcggatctgcacttgctcaaagctaatctttcaacataaatcaaataaacatcgcac 25658340  T
Q  103 aaagacgg 110  Q
     |||||||    
T  25658339 taagacgg 25658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28837339 - 28837232
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||   |||||||||||||||| ||| || | |||||||||||||||||||||||||| |||||||||||||||||||    
T  28837339 tctccggatctgcaacgttgacgacacgaaagtcattgtcattgttcggatcttcacttgctcaaagctaatctttcaacgtgaattaaataaacaccgc 28837240  T
Q  101 acaaagac 108  Q
    || |||||    
T  28837239 actaagac 28837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51152398 - 51152300
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||| ||||||||| || | ||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  51152398 tctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccg 51152300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 394121 - 394230
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||| ||| ||||||||| ||||  |||||||||||||||||||| || | ||||||||||||| |||||||||||| ||||| |||||||||||||    
T  394121 tctccggttctgcaacgttgacgacgctaaagtcattgtcattgatcggatctacacttgctcaaagttaatctttcaacctgaatcaaataaacaccgc 394220  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  394221 actaagacgg 394230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 477859 - 477968
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| ||||  |||| ||||||||||||||||||| | || |||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  477859 tctccggatctgcaatgttgtagacgccaaagtcattgtcattgattggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgc 477958  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  477959 actaagacgg 477968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 26674642 - 26674537
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||| |||  ||| |    
T  26674642 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataagcacgacacta 26674543  T
Q  105 agacgg 110  Q
    ||||||    
T  26674542 agacgg 26674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30202312 - 30202211
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||| |||||| ||| ||    
T  30202312 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttcctcaaagctaatttttcaacttgaatcaaataaccactgc 30202213  T
Q  101 ac 102  Q
    ||    
T  30202212 ac 30202211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42197827 - 42197718
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||| | ||||||||| |||  ||||||||||||||| ||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  42197827 tctccggatttgcaacgttgacgacaccaaagtcattgtcatcgatcggatctgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgc 42197728  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  42197727 actaagacgg 42197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50801491 - 50801382
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||  || ||||||||||||||  |||||||||||| ||||| |||||||||| ||    
T  50801491 tctccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcagatctgcacttgctcaaaattaatctttcaacctgaatcaaataaacacagc 50801392  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  50801391 actaagacgg 50801382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 53647906 - 53647797
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| ||||  |||| ||||||||||||||||||||| || ||||||||||||||| |||| ||||||| ||||| |||||||||||||    
T  53647906 tctccggatctgcaatgttggcgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatttttcaacctgaatcaaataaacaccgc 53647807  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  53647806 actaagacgg 53647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 27395087 - 27394995
Alignment:
Q  18 ttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||| |||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  27395087 ttgacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 27394995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 2448068 - 2447965
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| ||| ||||| |||| |||||||||| |||||||| |||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||    
T  2448068 gatctgcaatgttgacgacgccaaagtcattctcattgattgaatctgcacttgctcaaagttaatctttcaacataaatcaaataaacaccgcactaag 2447969  T
Q  107 acgg 110  Q
    ||||    
T  2447968 acgg 2447965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 20887606 - 20887712
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||| | |||||||| |||||    
T  20887606 tccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcggatttgcatttgctcaaagctaatctttcaatctgaa-tcaataaacatcgcac 20887704  T
Q  103 aaagacgg 110  Q
     |||||||    
T  20887705 taagacgg 20887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 26742316 - 26742419
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| ||||||||| |||  ||||||||||||||||||||| || | |||||||||||||||||||||||||  ||||| ||||||||||||||| |||    
T  26742316 gatctgcaacgttgacgactccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaag 26742415  T
Q  107 acgg 110  Q
    ||||    
T  26742416 acgg 26742419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 29923107 - 29923000
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| |||| |||| |||  ||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||| |||||||||||| ||    
T  29923107 tccggatctgcaacattgacgacaccaaagtcattgtcattgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaacaccgtac 29923008  T
Q  103 aaagacgg 110  Q
     |||||||    
T  29923007 taagacgg 29923000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11210160 - 11210269
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||| || | ||||   |||||| |||||||||||| ||||| |||||||||||||    
T  11210160 tctccggatctgcaacgttgatgacaccaaagtcattgtcattgatcggatctccactcaatcaaagttaatctttcaacctgaatcaaataaacaccgc 11210259  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  11210260 actaagacgg 11210269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 24568564 - 24568669
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| || | ||| ||||||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||||||||| ||| |    
T  24568564 cggatctgcaacgttgacgaggccaatgtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacaccccacta 24568663  T
Q  105 agacgg 110  Q
    ||||||    
T  24568664 agacgg 24568669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7083659 - 7083750
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaata 92  Q
    ||||| ||||| ||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||    
T  7083659 tctccagatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 7083750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 626424 - 626498
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  626424 caaagtcattgtcattggtcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 626498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44756889 - 44756995
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||||||||| |||| |||||||| ||||||| |||| || ||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  44756889 tctccgaatctgcaacgttgaagacgccaaagtcactgtcattaatcggatctgcacttgctcaatgctgatctttcaacctgaatcaaataaacaccgc 44756988  T
Q  101 acaaaga 107  Q
    || ||||    
T  44756989 actaaga 44756995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5814614 - 5814512
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| |||||||||||||| |||||||||||      ||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  5814614 tctctggatctgcaacgttgatgacgccaaagtcattg------atcgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgc 5814521  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  5814520 actaagacg 5814512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19745663 - 19745554
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| |||| |||| ||||  ||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||| ||| ||||||| |    
T  19745663 tctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacacctc 19745564  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  19745563 actaagacgg 19745554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19794143 - 19794252
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| |||| |||| ||||  ||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||| ||| ||||||| |    
T  19794143 tctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacacctc 19794242  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  19794243 actaagacgg 19794252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39837869 - 39837760
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| |  | |||| |||||||||||||||| || |||||||||||||||| ||| ||||||| ||||| |||||||||||||    
T  39837869 tctccagatctgcaacgttgacgttgccaaaatcattgtcattgatcggatctgcacttgctcaaagcaaatatttcaacctgaatcaaataaacaccgc 39837770  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  39837769 actaagacgg 39837760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43278208 - 43278099
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||| |||| ||||||| ||||||| ||||| || | ||||||||||||| ||||||| |||| ||||| |||||||||||||    
T  43278208 tctctggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgc 43278109  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  43278108 actaagacgg 43278099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 7861082 - 7861162
Alignment:
Q  30 aagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||| ||||||||||||||| |||||||    
T  7861082 aagtcattgtcattgatcggatctgcacttgcttaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgg 7861162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 24611659 - 24611754
Alignment:
Q  13 caacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||| |||| ||||||||||||||||||||  || ||||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||||    
T  24611659 caacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagttaatctttcaacctgaatcaaat-aacaccgcactaagacg 24611754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 8712767 - 8712695
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||||||    
T  8712767 gtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacgg 8712695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 43493161 - 43493240
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||||||||||| |  || |||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||    
T  43493161 caaagtcattgtcattgaccagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 43493240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 45350917 - 45351023
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||  ||| |||| |||| |||||||||||||||| |||  || |||||||| ||||||||||||||||||| ||| | ||||||||||| |    
T  45350917 tctccggatctgtaacattgacgacgccaaagtcattgtcattaatcagatctgcacttgatcaaagctaatctttcaacttgagtcaaataaacaccac 45351016  T
Q  101 acaaaga 107  Q
    || ||||    
T  45351017 actaaga 45351023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 45360396 - 45360502
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||  ||| |||| |||| |||||||||||||||| |||  || |||||||| ||||||||||||||||||| ||| | ||||||||||| |    
T  45360396 tctccggatctgtaacattgacgacgccaaagtcattgtcattaatcagatctgcacttgatcaaagctaatctttcaacttgagtcaaataaacaccac 45360495  T
Q  101 acaaaga 107  Q
    || ||||    
T  45360496 actaaga 45360502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 3159230 - 3159159
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||| || ||||||||||||||||||| |||||||| ||| | ||||||||| ||||| |||||||    
T  3159230 tcattgatcggatatgcacttgctcaaagctaacctttcaacctgattcaaataaacatcgcactaagacgg 3159159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 29268651 - 29268733
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||| |||||||||||| | | || ||||||| |||||||  ||||||||||| ||||| ||||||||||||||| |||||||    
T  29268651 caaattcattgtcattggttggatctgcacttcctcaaagtcaatctttcaacctgaatcaaataaacaccgcactaagacgg 29268733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5388783 - 5388746
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5388783 tctccggatctacaacgttgatgacgtcaaagtcattg 5388746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 6082309 - 6082366
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    ||||||| ||||| |||||||||||||||||||||||||||| | ||| |||||||||    
T  6082309 tcattgaccgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaaca 6082366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 27090959 - 27090890
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagac 108  Q
    |||||||||| || | ||||||||||||| |||||||||||| ||||| | ||||||||||||| |||||    
T  27090959 tcattgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagac 27090890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 22121683 - 22121623
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||||||||  ||| |||||||||||||||||||| ||||||| ||||| |||||||||||    
T  22121683 gtcattgattaaatatgcacttgctcaaagctaatatttcaacttgaatcaaataaacacc 22121623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 8517334 - 8517412
Alignment:
Q  29 aaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||   || || |||||||||||||| ||||||||||||| | ||| ||||||||||| ||| |||||||    
T  8517334 aaagtcattgtcatt---cggatctgcacttgctcaaaactaatctttcaacctaaatcaaataaacaccacactaagacgg 8517412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 24789426 - 24789355
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||| | |||| |||| ||| ||||||||||||||||||| ||||| |||||||||| |||| ||||||    
T  24789426 gtcattggttgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagacg 24789355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 24818833 - 24818904
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||| | |||| |||| ||| ||||||||||||||||||| ||||| |||||||||| |||| ||||||    
T  24818833 gtcattggttgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagacg 24818904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 56236675 - 56236767
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||| ||||||||| |||| ||||||||      ||||||| || ||| ||||||||||| |||||||||||| ||||| ||||||| ||||    
T  56236675 tctccggatctgcaacgttgacgacgccaaagtca------ttgatcggatctgcgcttgctcaaagttaatctttcaacttgaatcaaataaataccg 56236767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 12717016 - 12717073
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||  |||||||||||| |||||| ||||| ||||||||||||||| |||||||    
T  12717016 tgcacttaatcaaagctaatccttcaacctgaatcaaataaacaccgcactaagacgg 12717073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 24825716 - 24825668
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  24825716 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 24825668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 35658378 - 35658414
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35658378 ctccggatctgcaacgttgatgacgtcaaagtcattg 35658414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 13169329 - 13169384
Alignment:
Q  42 ttgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    ||||| ||||||||||||| ||||| ||||||||||||  ||||| ||||||||||    
T  13169329 ttgattgaatttgcacttgatcaaaactaatctttcaatctgaatcaaataaacac 13169384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 31932498 - 31932435
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    |||||||| |||| | |||||| ||||| |||||||||  |||||||| |||||||||||||||    
T  31932498 tcattgattgaatctacacttgatcaaaactaatctttttacatgaatcaaataaacaccgcac 31932435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 1532001 - 1531964
Alignment:
Q  71 atctttcaacatgaattaaataaacaccgcacaaagac 108  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  1532001 atctttcaacatgaatcaaataaacaccgcacgaagac 1531964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 18995523 - 18995455
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||| |||| || ||||| ||||| |||||||||||||   ||| |||| |||||||||||||||||    
T  18995523 gtcattgattgaatctgtacttgatcaaaactaatctttcaac---aatcaaatgaacaccgcacaaagacg 18995455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33020773 - 33020810
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  33020773 tctccgaatctacaacgttgatgacgccaaagtcattg 33020810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42972306 - 42972269
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  42972306 tctccggatctgcaacgtggatgacgtcaaagtcattg 42972269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 44757096 - 44757141
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcg 223  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  44757096 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcg 44757141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 56172081 - 56172012
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||  |||| || ||||| | |||| |||||||||||| | ||||||||||||||||||| ||||    
T  56172081 gtcattgaatgaatctgtacttgattaaagataatctttcaaccttaattaaataaacaccgcactaaga 56172012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 7060391 - 7060351
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  7060391 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 7060351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 13965627 - 13965587
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  13965627 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 13965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 22757161 - 22757121
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  22757161 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 22757121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 29268831 - 29268879
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||| ||||||||||| |||||||    
T  29268831 tatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggag 29268879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 29965729 - 29965689
Alignment:
Q  70 aatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||| |||||| |||| ||||||||||||||||||    
T  29965729 aatctttcaatatgaatcaaatgaacaccgcacaaagacgg 29965689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 31522049 - 31522009
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  31522049 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 31522009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 43244435 - 43244475
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  43244435 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 43244475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 50981565 - 50981597
Alignment:
Q  6 ggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||||||||||||| |||||||||||    
T  50981565 ggatctacaacgttgatgacgccaaagtcattg 50981597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 55600422 - 55600482
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    |||||||| | || ||| |||||||||||||||||||||||   |||| ||||||||||||    
T  55600422 tcattgattggatctgcgcttgctcaaagctaatctttcaagcggaatcaaataaacaccg 55600482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40013127 - 40013233
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  40013127 tctccggatctgcaacgttgacgacgtcaaagtcattgtcattgattgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 40013226  T
Q  101 acaaaga 107  Q
    || ||||    
T  40013227 actaaga 40013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48401136 - 48401029
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  48401136 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatcttttaacctgaatcaaataaacaccgc 48401037  T
Q  101 acaaagac 108  Q
    ||||||||    
T  48401036 acaaagac 48401029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 35174975 - 35174873
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  35174975 atctgcaacgttgatgacgccaaagtcattgtcattgatcaaatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 35174876  T
Q  108 cgg 110  Q
    |||    
T  35174875 cgg 35174873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49627950 - 49628059
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  49627950 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaacaccgc 49628049  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  49628050 actaagacgg 49628059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 53155285 - 53155394
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  53155285 tctccggatctgcaaagttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgc 53155384  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  53155385 actaagacgg 53155394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 53402895 - 53402786
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  53402895 tctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacagcgc 53402796  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  53402795 actaagacgg 53402786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1074749 - 1074858
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| |||  |    
T  1074749 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataatcactac 1074848  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  1074849 actaagacgg 1074858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 22485235 - 22485130
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| |||||||||||||||||| || || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |    
T  22485235 cggatctgcaacgttgaggacgccaaagtcattgtcattgaccggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcacta 22485136  T
Q  105 agacgg 110  Q
    ||||||    
T  22485135 agacgg 22485130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31270600 - 31270491
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || | |||||||||||||||||||||||||| |||||  ||||||||||||    
T  31270600 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcgaataaacaccgc 31270501  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  31270500 actaagacgg 31270491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48855151 - 48855042
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||| ||| || | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  48855151 tctccggatctgcaacggtgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacatgaatcaaataaacaccac 48855052  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  48855051 actaagacgg 48855042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 54706570 - 54706679
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||| ||||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  54706570 tctccggatctgcaacgttgacgacgccaaagccattgtcattgatcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaacaccgc 54706669  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  54706670 actaagacgg 54706679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3457213 - 3457104
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||| ||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  3457213 tctctggatctgcaatgttgacgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgt 3457114  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  3457113 actaagacgg 3457104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14585736 - 14585627
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||| ||||| |||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  14585736 tctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgc 14585637  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  14585636 actaagacgg 14585627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36624550 - 36624659
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || | ||||| ||||||||||||||| || |||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  36624550 tctccggatctgcaacgttgacgatgccaaagccattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgc 36624649  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  36624650 actaagacgg 36624659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45047788 - 45047687
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| | |||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||| |||||||||||||    
T  45047788 tctccggatctgcaacgttgacgacgccgaagtcattgtcattgatcgaatctgcacttgctaaaagctaatctttcaatctgaataaaataaacaccgc 45047689  T
Q  101 ac 102  Q
    ||    
T  45047688 ac 45047687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31462601 - 31462708
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| || |||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  31462601 tctctggatctgcaccgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacgccgc 31462700  T
Q  101 acaaagac 108  Q
    || |||||    
T  31462701 actaagac 31462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36691654 - 36691763
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||| || || ||||||||||||     
T  36691654 tctccagatctgcaacgttgacgacgccaaagtcattgtcattgatcgaatatgcacttgcgcaaagttaatctttcaacctggatcaaataaacaccgt 36691753  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  36691754 actaagacgg 36691763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 40883725 - 40883830
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| |||||| || |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||| ||| ||||||||||| |    
T  40883725 cggatctgcaacgtcgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaagaaacaccgcacta 40883824  T
Q  105 agacgg 110  Q
    ||||||    
T  40883825 agacgg 40883830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48401392 - 48401280
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatcttt-----caacatgaattaaataaac 95  Q
    ||||||||||| ||||||||| |||| |||||||||| |||||||||| || ||||||||||||||||||||||||      ||| ||||||||||||||    
T  48401392 tctccggatctgcaacgttgacgacgccaaagtcattatcattgatcggatctgcacttgctcaaagctaatcttttaacctaacctgaattaaataaac 48401293  T
Q  96 accgcacaaagac 108  Q
    |||||||||||||    
T  48401292 accgcacaaagac 48401280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19861134 - 19861229
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||| || ||||||    
T  19861134 tctccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcgaatatgcacttgctcaaagttaatatttcaacctgaatcaagtaaaca 19861229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 13701883 - 13701957
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  13701883 caaagtcattgtcattgatcagatttgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcac 13701957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 55455108 - 55455030
Alignment:
Q  32 gtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  55455108 gtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 55455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 11819353 - 11819248
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| |||||||||||| |||||||| || ||| | || ||||||||||||||||||| ||||| ||||||||||||||| |    
T  11819353 cggatctgcaacgttgacgacgccaaagtcattgttattgatcggatatgctcctgttcaaagctaatctttcaacctgaatcaaataaacaccgcacta 11819254  T
Q  105 agacgg 110  Q
    ||||||    
T  11819253 agacgg 11819248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32080609 - 32080710
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| || ||| |||| |||||||||||| |||||  ||||| ||||||||| |||    
T  32080609 tctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatcattcaagctgaatcaaataaacatcgc 32080708  T
Q  101 ac 102  Q
    ||    
T  32080709 ac 32080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48652295 - 48652404
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||||||| |||||||||| || ||| |||| |||||| |||||||||||| | ||| |||||||||||||    
T  48652295 tctccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgc 48652394  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  48652395 actaagacgg 48652404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 27189272 - 27189368
Alignment:
Q  14 aacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||| |||| |||||||| |||||||||||  || | |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  27189272 aacgttgacgacgccaaagtcaatgtcattgatcagatctacacttgctcaaagctaatctttcaacctgaataaaataaacaccgcaccaagacgg 27189368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 55446330 - 55446222
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||| | || ||||||||||||||||||||| |||||  ||||| |||||||| |||||    
T  55446330 ctccggatctgcaacgttgacgacgctaaagtcattgtcattgattggatctgcacttgctcaaagctaatccttcaatctgaatcaaataaaccccgca 55446231  T
Q  102 caaagacgg 110  Q
    | |||||||    
T  55446230 ctaagacgg 55446222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 33637673 - 33637568
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||||| | ||| ||||||||||||||| |    
T  33637673 cggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgcttttgttcaaagctaatctttcaacctaaatcaaataaacaccgcacta 33637574  T
Q  105 agacgg 110  Q
    ||||||    
T  33637573 agacgg 33637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41868178 - 41868287
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||| ||| ||||||||| || |  |||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||| ||| | || ||||    
T  41868178 tctccggttctgcaacgttgacgatgctaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaaaatacgccgc 41868277  T
Q  101 acaaagacgg 110  Q
    ||||||||||    
T  41868278 acaaagacgg 41868287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 19645461 - 19645374
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaata 92  Q
    ||||||| |||  |||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||    
T  19645461 cggatctgcaatattgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 19645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 54238882 - 54238982
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| |||||||||  ||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||| ||||  ||||||||| ||||    
T  54238882 atctgcaacgttgacaacgccaaagtcattgtcattgatcggatatgcacttgctcaaatctaatctttcaacctgaatcaaat--acaccgcactaaga 54238979  T
Q  108 cgg 110  Q
    |||    
T  54238980 cgg 54238982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 30156139 - 30156245
Alignment:
Q  4 ccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcaca 103  Q
    |||||||| |||| |||| |||| |||| ||||||| |||||||| || || ||||||||||||||||| |||||||  |||| |||||||||||||||     
T  30156139 ccggatctgcaaccttgacgacgccaaaatcattgttattgatcggatctgaacttgctcaaagctaatttttcaaccagaatcaaataaacaccgcact 30156238  T
Q  104 aagacgg 110  Q
    |||||||    
T  30156239 aagacgg 30156245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 39610477 - 39610376
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||| |||| |||  ||||||||||||||||||||| || |||||||||||||||||||||||||||  | ||| ||||||||| || || ||||    
T  39610477 atctacaacattgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaatctaaatcaaataaacaacgtactaaga 39610378  T
Q  108 cg 109  Q
    ||    
T  39610377 cg 39610376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 105927 - 105999
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||  ||| |||||||    
T  105927 gtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacgacactaagacgg 105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24483534 - 24483613
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaac 80  Q
    ||||| ||||| ||||||||| || | ||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  24483534 tctccagatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatatttcaac 24483613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34103603 - 34103703
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||||||||| ||||   ||||||||||||||||||| || ||||||||||| || |||||||||| || ||||| |||||||||||||    
T  34103603 tctccgtatctgcaacgttgacgacgctgaagtcattgtcattgatcggatctgcacttgctc-aatctaatctttcgacctgaatcaaataaacaccgc 34103701  T
Q  101 ac 102  Q
    ||    
T  34103702 ac 34103703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 4081978 - 4081910
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatc 73  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||    
T  4081978 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatc 4081910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 39429393 - 39429462
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    ||||||||| | ||||||||||||||| ||||||||||||||| | ||||||||||||||| ||| ||||    
T  39429393 gtcattgattggatttgcacttgctcagagctaatctttcaacctaaattaaataaacaccacactaaga 39429462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 53962340 - 53962283
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  53962340 tgcacttgctcaaagctaatcttttaacctgaatcaaataaacaccgcactaagacgg 53962283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38530215 - 38530168
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcg 48  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  38530215 tctccggatctgcaacgttgacgacgtcaaagtcattgtcattgatcg 38530168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 47733769 - 47733840
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||| |||| |||| ||||||||| ||||| ||||||| ||||| ||||||||||||||| ||||||    
T  47733769 gtcattgattgaatatgcatttgctcaaaactaatatttcaacctgaatcaaataaacaccgcactaagacg 47733840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 3961654 - 3961726
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| |||| | || |||||||||| ||||||| |||| ||||| ||||||||||||||| |||||||    
T  3961654 gtcattgattgaatctacatttgctcaaagttaatcttacaacctgaatcaaataaacaccgcactaagacgg 3961726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 4817759 - 4817810
Alignment:
Q  29 aaagtcattgtcattgatcgaatt-tgcacttgctcaaagctaatctttcaa 79  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  4817759 aaagtcattgtcattgatcggattctgcacttactcaaagctaatctttcaa 4817810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 31730878 - 31730823
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||| |||||||||    
T  31730878 attgatcggatttgcacttgttcaaagttaatctttcaacttgaatcaaataaaca 31730823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34960757 - 34960804
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcg 48  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  34960757 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcg 34960804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 3312664 - 3312618
Alignment:
Q  55 cacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  3312664 cacttgctcaaagctaatatttcaacctgaatcaaataaacaccgca 3312618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 25135204 - 25135272
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||| || |||||||||||||||| ||||| ||||||| ||||| | |||||||| |||| ||||    
T  25135204 tcattgattgattttgcacttgctcaaatctaatatttcaacttgaatcagataaacactgcactaaga 25135272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 20044743 - 20044798
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||| |||| |||||||||||||| |||||||| |||| ||||| |||||||||    
T  20044743 attgattgaatatgcacttgctcaaaactaatcttccaacctgaatcaaataaaca 20044798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 6894658 - 6894708
Alignment:
Q  57 cttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||| ||||||||||||| ||||||||||||| || |||| ||||    
T  6894658 cttgctcaaaactaatctttcaacttgaattaaataaatacggcactaaga 6894708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21803799 - 21803762
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  21803799 tctccggatctgcaacgtggatgacgtcaaagtcattg 21803762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 2147993 - 2147922
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||  || | ||||||||||||| ||||||| ||||  |||| ||||||||||||||| |||||||    
T  2147993 gtcattgatcagatctacacttgctcaaagataatctt-caactcgaatcaaataaacaccgcactaagacgg 2147922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 14585529 - 14585489
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  14585529 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 14585489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 33076552 - 33076516
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| |||||| |||||||||||||||||||    
T  33076552 ctccggatctgcaacgtggatgacgtcaaagtcattg 33076516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 34960920 - 34960960
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  34960920 tatgtgaaatcacttattcaattagaatagaagaaaaaaca 34960960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 35174771 - 35174731
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  35174771 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 35174731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 36691861 - 36691909
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||| | |||||||    
T  36691861 tatgtgaaatcacttattcaattaggatagaaggaaaaataactcggag 36691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 54239080 - 54239120
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  54239080 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 54239120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 13096 - 13201
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |    
T  13096 cggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacctcacta 13195  T
Q  105 agacgg 110  Q
    ||||||    
T  13196 agacgg 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14600553 - 14600661
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  14600553 tctctggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 14600652  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  14600653 actaagacg 14600661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4757439 - 4757330
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  4757439 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgc 4757340  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  4757339 actaagacgg 4757330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 37612925 - 37612818
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  37612925 tccggatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcaattgctcaaagctaatctttcaacttgaatcaaataaacaccgcac 37612826  T
Q  103 aaagacgg 110  Q
     |||||||    
T  37612825 taagacgg 37612818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9501860 - 9501751
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||| | ||||||||| ||   ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  9501860 tctccggatttgcaacgttgacgaaaccaaagtcgttgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 9501761  T
Q  101 acaaagacgg 110  Q
    ||||||||||    
T  9501760 acaaagacgg 9501751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10338677 - 10338786
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||||||||||| |||||||| || |||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  10338677 tctccggatctgcaacgttgacgacgccaaagtcattgttattgatcggatctgcacttgctcaaagctaatttttcaacttgaatcaaataaacaccgc 10338776  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  10338777 actaagacgg 10338786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30026737 - 30026846
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || | ||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30026737 tctccggatctgcaacgttgaagatgccaaagtcattgtcattgatcagacctgcacttgctcaaagctaatctttcaacatgaatcaaataaacaccgc 30026836  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  30026837 actaagacgg 30026846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 11162155 - 11162056
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  11162155 tccggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 11162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 31407604 - 31407710
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||||||| ||| ||||| || | ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  31407604 ctccggatctgcaatgttgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgca 31407703  T
Q  102 caaagac 108  Q
    | |||||    
T  31407704 ctaagac 31407710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1810077 - 1810186
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| ||||| ||||||||| |||    
T  1810077 tctccggatctgcaacgttggcgacgtcaaagtcattgtcattgatcggatttacacttgctcaaaactaatctttcaacctgaatcaaataaacatcgc 1810176  T
Q  101 acaaagacgg 110  Q
     | |||||||    
T  1810177 gctaagacgg 1810186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7579710 - 7579819
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||  |||| |||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  7579710 tctctggatctgcaacgttggcgacgccaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 7579809  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  7579810 actaagacgg 7579819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12329901 - 12329792
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||| ||||||| | ||| |||||||||||||    
T  12329901 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctaaatcaaataaacaccgc 12329802  T
Q  101 acaaagacgg 110  Q
    |  |||||||    
T  12329801 attaagacgg 12329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39067544 - 39067653
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||  |||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  39067544 tctctggatctgcaacgttggcgacgccaaagtcattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacatgaatctaataaacaccgc 39067643  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  39067644 actaagacgg 39067653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 2234326 - 2234434
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||||||| ||||||||| ||| ||||| ||||||| |||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  2234326 ctccggatctgcaacgttgacgacatcaaattcattgttattgatcggatctgcacttgctcaaagctaatatttcaacctgaatcaaataaacaccgca 2234425  T
Q  102 caaagacgg 110  Q
    | |||||||    
T  2234426 ctaagacgg 2234434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10148219 - 10148121
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  10148219 tctccggatctgcaacgttgacgacgctaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccg 10148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2025079 - 2025188
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || | || | |||||||||||||||| || |||||||||||||||||||||||||||  ||||| |||||||||||||    
T  2025079 tctccggatctgcaacgttgacgatgccagaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgc 2025178  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  2025179 actaagacgg 2025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24791023 - 24791120
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| | |||||||||||    
T  24791023 tctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgattcaaataaacacc 24791120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37128343 - 37128451
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| ||||| |||| |||||||||||| |||||||| || |||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  37128343 tctccggatctgcaa-gttgacgacgccaaagtcattgttattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgc 37128441  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  37128442 actaagacgg 37128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13570594 - 13570701
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| || | |||||||||||| |||||||  || |||||||||||||||||||||||||||| ||||| ||||||||||| |    
T  13570594 tctccggatctgcaacgttgacgatgccaaagtcattgtaattgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccac 13570693  T
Q  101 acaaagac 108  Q
    || |||||    
T  13570694 actaagac 13570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24700106 - 24700005
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||| |||| |||||||||||| || |||| |||||||||| |||||||||||| ||||| |||||||||||||    
T  24700106 tctccggatctgcaacgttgacgacgacaatgtcaatgtcattgatcggatctgcatttgctcaaagttaatctttcaacctgaatcaaataaacaccgc 24700007  T
Q  101 ac 102  Q
    ||    
T  24700006 ac 24700005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41362006 - 41361905
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| | ||||||| |||  ||||||||||| ||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  41362006 tctctggatctgcgacgttgacgacaccaaagtcattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgc 41361907  T
Q  101 ac 102  Q
    ||    
T  41361906 ac 41361905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 19720279 - 19720191
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataa 93  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||| ||||| ||||||    
T  19720279 cggatctgcaacgttgacgacgtcaaagtcattgttattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataa 19720191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31202732 - 31202625
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| | ||||||| |||||||||||||||||||||||||  || |||||||| |||||| |||||||||||| ||||| |||||||||| ||    
T  31202732 tctctggatctgcgacgttgacgacgtcaaagtcattgtcattgatcagatctgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgc 31202633  T
Q  101 acaaagac 108  Q
    || |||||    
T  31202632 actaagac 31202625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22787764 - 22787657
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| ||||| |||| |||||||||| ||||||||||  | |||| || |||||||||||||||||||| ||||| |||||||||||||    
T  22787764 tctccggatctgcaatgttgacgacgccaaagtcattctcattgatcg--tctgcatttactcaaagctaatctttcaacctgaatcaaataaacaccgc 22787667  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  22787666 actaagacgg 22787657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 23971050 - 23971115
Alignment:
Q  13 caacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttca 78  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  23971050 caacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttca 23971115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 43937064 - 43937141
Alignment:
Q  33 tcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||    
T  43937064 tcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgg 43937141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 3204644 - 3204748
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| |||||||||  ||| |||||||||||| ||| |||| || ||||||||||||||| |||||||||||| ||||| |||||||||| |||| |    
T  3204644 cggatctgcaacgttgaccacgccaaagtcattgtgatttatcggatatgcacttgctcaaagttaatctttcaacttgaatcaaataaacactgcacta 3204743  T
Q  105 agacg 109  Q
    |||||    
T  3204744 agacg 3204748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 28296985 - 28297068
Alignment:
Q  24 acgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||||||| |||||||||| || |||| ||||||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  28296985 acgtcaaagtcattttcattgatcggatctgcagttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaaga 28297068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31308422 - 31308327
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    ||||||||||| ||||||||| |||  ||||||| ||||||||||||| || |||||||| ||||| ||| ||||||||| |||||||||||||||    
T  31308422 tctccggatctgcaacgttgacgacaccaaagtcgttgtcattgatcggatctgcacttgttcaaaactattctttcaacctgaattaaataaaca 31308327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24210515 - 24210408
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||| |||| ||||||| |||| | |||||| || | |||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  24210515 tctctggatctgcaacgttgacgacgccaaagtctttgtgaatgatcggatctacacttgttcaaagctaatctttcaacctgaatcaaataaataccgc 24210416  T
Q  101 acaaagac 108  Q
    || |||||    
T  24210415 actaagac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 2968769 - 2968697
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||| |||||||||||||||||||  |||||||||| ||||| ||||||| ||||||| |||||||    
T  2968769 gtcattgatcggatttgcacttgctcaaagcggatctttcaacctgaatcaaataaataccgcactaagacgg 2968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 10633074 - 10633145
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||| |||| | |||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  10633074 tcattgattgaatctacacttgatcaaagctaatctttcaacctgaataaaataaacaccgcactaagacgg 10633145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 32778849 - 32778912
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    ||||||||||| || ||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  32778849 gtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgca 32778912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 19489066 - 19489006
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    ||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||||    
T  19489066 gtcattgattgaatttgcacttgatcaaagttaatctttcaacctgaatcaaataaacacc 19489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 10334413 - 10334342
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||||||||| || |||| ||||||||||||||| ||||||  ||||| ||||||||||||||| ||||||    
T  10334413 gtcattgatcggatctgcatttgctcaaagctaatatttcaatctgaatcaaataaacaccgcactaagacg 10334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 6219989 - 6220057
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||| |||| |||||||||||||  ||||||||||||| ||||| ||||||||| |||| |||||    
T  6219989 tcattgattgaatctgcacttgctcaagactaatctttcaacctgaatgaaataaacatcgcataaaga 6220057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 13576090 - 13576158
Alignment:
Q  42 ttgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||| || ||||||||||||||| |||||||||||  |||||  |||||||||||||| |||||||    
T  13576090 ttgatcggatctgcacttgctcaaagttaatctttcaatctgaatctaataaacaccgcactaagacgg 13576158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 23971156 - 23971203
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcgga 225  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  23971156 tatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgga 23971203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38546009 - 38546103
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    ||||||||||| ||||||||| |||| |||| ||  |||||||||||| || |||| ||| |||||| |||||||||||  ||||| |||||||||    
T  38546009 tctccggatctgcaacgttgacgacgccaaa-tctatgtcattgatcggatatgcatttggtcaaagttaatctttcaatctgaatcaaataaaca 38546103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40490371 - 40490442
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaat 72  Q
    ||||||||||| |||| |||| ||||  |||||||||||||||||||| || |  |||||||||||||||||    
T  40490371 tctccggatctgcaacattgacgacgctaaagtcattgtcattgatcggatctatacttgctcaaagctaat 40490442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 31308215 - 31308167
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  31308215 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 31308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 1039811 - 1039858
Alignment:
Q  63 caaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||||| || || ||||||||||||||| |||||||    
T  1039811 caaagctaatctttcaacctggatcaaataaacaccgcactaagacgg 1039858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5526076 - 5526033
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattg 44  Q
    ||||||||||| |||||||||||| | |||||||||||||||||    
T  5526076 tctccggatctgcaacgttgatgatgccaaagtcattgtcattg 5526033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 15288719 - 15288754
Alignment:
Q  32 gtcattgtcattgatcgaatttgcacttgctcaaag 67  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15288719 gtcattgtcattgatcggatttgcacttgctcaaag 15288754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 15469088 - 15469123
Alignment:
Q  32 gtcattgtcattgatcgaatttgcacttgctcaaag 67  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15469088 gtcattgtcattgatcggatttgcacttgctcaaag 15469123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18196992 - 18197029
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  18196992 tctccggatctgcaacgttgacgacgtcaaagtcattg 18197029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 32062061 - 32062025
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| |||||||||||||| |||||||||||    
T  32062061 ctccggatctgcaacgttgatgacgccaaagtcattg 32062025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 41288228 - 41288121
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||| ||    
T  41288228 tccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgtac 41288129  T
Q  103 aaagacgg 110  Q
     |||||||    
T  41288128 taagacgg 41288121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10574655 - 10574546
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| ||||||||||||     
T  10574655 tctccagatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacatgaatcaaataaacaccga 10574556  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  10574555 actaagacgg 10574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17473599 - 17473708
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| | ||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17473599 tctctggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgc 17473698  T
Q  101 acaaagacgg 110  Q
    ||||||||||    
T  17473699 acaaagacgg 17473708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17509051 - 17509160
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| | ||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17509051 tctccggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgc 17509150  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  17509151 actaagacgg 17509160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17544163 - 17544054
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| | ||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17544163 tctccggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgc 17544064  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  17544063 actaagacgg 17544054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17579615 - 17579506
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| | ||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17579615 tctctggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgc 17579516  T
Q  101 acaaagacgg 110  Q
    ||||||||||    
T  17579515 acaaagacgg 17579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3266660 - 3266552
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||     
T  3266660 tctccggatctacaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgt 3266561  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  3266560 actaagacg 3266552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36253204 - 36253106
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  36253204 tctccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccg 36253106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1280984 - 1281093
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||| ||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  1280984 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgttcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaacaccgc 1281083  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  1281084 actaagacgg 1281093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21990936 - 21990827
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||  ||||| |||||||||||||    
T  21990936 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatcagcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgc 21990837  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  21990836 actaagacgg 21990827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42644946 - 42644837
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| |||| |||||||||||||||| || || ||||||||||||||||| ||||||| |||||||||||||||||||    
T  42644946 tctccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgtacttgctcaaagctaatatttcaacctgaattaaataaacaccgc 42644847  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  42644846 actaagacgg 42644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 9785589 - 9785485
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9785589 tccggatctgcaacgttgacgactccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 9785490  T
Q  103 aaaga 107  Q
     ||||    
T  9785489 taaga 9785485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 10094710 - 10094606
Alignment:
Q  6 ggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaa 105  Q
    |||||| ||||||| | |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  10094710 ggatctgcaacgttaacgacaccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 10094611  T
Q  106 gacgg 110  Q
    |||||    
T  10094610 gacgg 10094606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 11833288 - 11833184
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||||||||||| | ||||  |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |    
T  11833288 cggatctacaacgttaacgacgcaaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcacta 11833189  T
Q  105 agacg 109  Q
    |||||    
T  11833188 agacg 11833184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45457403 - 45457511
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||     
T  45457403 tctccggatctgcaacgttgacgactccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgt 45457502  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  45457503 actaagacg 45457511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 21603732 - 21603625
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| || ||||||| ||||||| |||||||||||| ||||| |||||||||||||||    
T  21603732 tccggatctgcaacgttgacgacgttaaagtcattgtcattgatcggatctgcactttctcaaagttaatctttcaacctgaatcaaataaacaccgcac 21603633  T
Q  103 aaagacgg 110  Q
     |||||||    
T  21603632 taagacgg 21603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26161225 - 26161118
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||| ||| ||||    
T  26161225 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaatgaaccccgc 26161126  T
Q  101 acaaagac 108  Q
    || |||||    
T  26161125 actaagac 26161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45482338 - 45482229
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||   || ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  45482338 tctccggatctgcaacgttgacagcgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgc 45482239  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  45482238 actaagacgg 45482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 9719826 - 9719929
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| |||||||||  ||| |||| |||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||    
T  9719826 gatctgcaacgttgactacgccaaaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 9719925  T
Q  107 acgg 110  Q
    ||||    
T  9719926 acgg 9719929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 24988329 - 24988436
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| |||||||||  ||  ||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24988329 tccggatctgcaacgttgacaacaccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcac 24988428  T
Q  103 aaagacgg 110  Q
     |||||||    
T  24988429 taagacgg 24988436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 48304241 - 48304348
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcatt-gatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||| |||| ||||||||| |||| |||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  48304241 tccgtatctgcaacgttgacgacgccaaagtcattgtcattcgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgca 48304340  T
Q  102 caaagacg 109  Q
    | ||||||    
T  48304341 ctaagacg 48304348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 28664795 - 28664897
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| ||||||||| |||| ||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||    
T  28664795 atctgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaaga 28664894  T
Q  108 cgg 110  Q
    |||    
T  28664895 cgg 28664897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42603616 - 42603717
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| |||||  |||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  42603616 tctccagatctgtaacgttgacgacatcaaagtcattgtcattgatcggatatgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgc 42603715  T
Q  101 ac 102  Q
    ||    
T  42603716 ac 42603717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 46025876 - 46025985
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| |||||||||  |||  |||||||||||||||||||| || |||||||||||||||||||||||||||| | ||| |||||||||||||    
T  46025876 tctccgaatctgcaacgttgacaacgctaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgc 46025975  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  46025976 actaagacgg 46025985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 24320076 - 24320179
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| ||| ||||| |||  ||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||    
T  24320076 gatctgcaatgttgacgacaccaaagtcattgtcatagatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 24320175  T
Q  107 acgg 110  Q
    ||||    
T  24320176 acgg 24320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 27535700 - 27535601
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||||| ||| | |||| ||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  27535700 tccggatctacaatgttaacgacgccaaagtcattgtcattggtcgaacctgcacttgctcaaagctaatctttcaacttgagtcaaataaacaccgcac 27535601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 39532824 - 39532923
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||| ||||| |||  |||||||||| |||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  39532824 tccggatctgcaatgttgacgactccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcac 39532923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36579188 - 36579297
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||| |||| |||| ||||||||||||||||||||  || | || ||||||||||||||||||||||  ||||| |||||||||||||    
T  36579188 tctccggatctgcaacattgacgacgccaaagtcattgtcattgatcagatctacaattgctcaaagctaatctttcaatctgaatcaaataaacaccgc 36579287  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  36579288 actaagacgg 36579297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36719399 - 36719508
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||  || || |||||||||||| |||||||||||| ||||| |||||| |||| |    
T  36719399 tctccggatctggaacgttgatgacgccaaagtcattgtcattgatcagatctgtacttgctcaaagttaatctttcaacctgaatcaaataagcacccc 36719498  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  36719499 actaagacgg 36719508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 43847337 - 43847248
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    |||| ||||||||| |||||||||||||||||||||||||| || | |||||||||||| ||||||||||||| ||||| ||||||||||    
T  43847337 atctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctacacttgctcaaatctaatctttcaacctgaatcaaataaacac 43847248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 2622862 - 2622760
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||| ||||| |||| |||||| |||||||||||| | || ||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  2622862 cggatctgcaatgttgacgacgccaaagttattgtcattgattggatctgcacttgctcaaagttaatctttcaatttgaatcaaataaacaccgcacaa 2622763  T
Q  105 aga 107  Q
    |||    
T  2622762 aga 2622760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 15674465 - 15674567
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| |||||||||  ||| ||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||| ||||    
T  15674465 atctgcaacgttgacaacgccaacgtcattgtcgttgattgaatttgcacttgctaaaagctaatctttcaacctgaataaaataaacaccacactaaga 15674564  T
Q  108 cgg 110  Q
    |||    
T  15674565 cgg 15674567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5684638 - 5684541
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||||||||||  |||||||| || |||||||| |||| ||||||||| || |||||||||||||||||||||||||||| ||||| ||| |||||||    
T  5684638 tctccggatctgtaacgttgacgatgtcaaagtaattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacacc 5684541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5709688 - 5709591
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||||||||||  |||||||| || |||||||| |||| ||||||||| || |||||||||||||||||||||||||||| ||||| ||| |||||||    
T  5709688 tctccggatctgtaacgttgacgatgtcaaagtaattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacacc 5709591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 6667665 - 6667560
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||  || |||||||| ||||||| ||||||||||| ||| | || |||||||||||| |    
T  6667665 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatatgcacttgatcaaagccaatctttcaacttgagtcaattaaacaccgcacta 6667566  T
Q  105 agacgg 110  Q
    ||||||    
T  6667565 agacgg 6667560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32741026 - 32740917
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||| | |||||||   |||| |||| |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| |    
T  32741026 tctccggatttgcaacgttagcgacgccaaaatcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgaatcaaatagacaccac 32740927  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  32740926 actaagacgg 32740917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40761862 - 40761761
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||  |||||||| || | ||||||||||||||||||||| || |||||||| ||||||||||| ||||||| | ||| |||||||||||||    
T  40761862 tctccggatctgtaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatatttcaaccttaatcaaataaacaccgc 40761763  T
Q  101 ac 102  Q
    ||    
T  40761762 ac 40761761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44482720 - 44482805
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaat 86  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||    
T  44482720 tctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatatttcaacctgaat 44482805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 21954672 - 21954761
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    |||||||||| ||||||||| |||| ||||||||      ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  21954672 ctccggatctgcaacgttgacgacgccaaagtca------ttgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacac 21954761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15017222 - 15017321
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattg-atcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||| ||||| ||||||||| ||||  |||||||||||||||| |||| | |||||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  15017222 tctccagatctgcaacgttgacgacgctaaagtcattgtcattggatcggagttgcacttactcaaagctaatatttcaacctgaatcaaataaacaccg 15017321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 29352463 - 29352391
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||| | ||||||| |||||||||||||||||| ||||| ||||||||| ||||| |||||||    
T  29352463 gtcattgatcgaatctacacttgcacaaagctaatctttcaacctgaatcaaataaacatcgcactaagacgg 29352391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32643242 - 32643170
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatc 73  Q
    ||||||||||| |||||| || |||| ||||||||||||||||||||| || |||||||||| ||||||||||    
T  32643242 tctccggatctgcaacgtggacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatc 32643170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 38277081 - 38277009
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||  |||| |||||||    
T  38277081 gtcattgatcggatttgaacttgctcaaagctaatatttcaacatgaatcaaataaacattgcactaagacgg 38277009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 22747363 - 22747465
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| ||||||||| |||| |||| ||||||||| |||||  || |||||||||||| ||||||||||||||| | ||| || |||||||||| | ||||    
T  22747363 atctgcaacgttgacgacgccaaattcattgtcaatgatcagatctgcacttgctcagagctaatctttcaaccttaatcaattaaacaccgccctaaga 22747462  T
Q  108 cgg 110  Q
    |||    
T  22747463 cgg 22747465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 4621251 - 4621315
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||| || |||||||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  4621251 gtcattgatcggatctgcacttgttcaaaactaatctttcaacctgaatcaaataaacaccgcac 4621315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 27050362 - 27050418
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  27050362 tgcatttgctcaaagctaatctttcgacatgaatcaaataaacaccgcactaagacg 27050418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 10624035 - 10623977
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||| ||||| |||||||||    
T  10624035 gtcattgattgaatttgtacttgatcaaagctaatctttcaacttgaatcaaataaaca 10623977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14657704 - 14657794
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacac 97  Q
    ||||||||||| |||| ||||||||| ||||||||      |||||||||| |||| |||||||||| |||||||||||  ||||| ||||||||||    
T  14657704 tctccggatctgcaacattgatgacgccaaagtca------ttgatcgaatatgcatttgctcaaagttaatctttcaatctgaatcaaataaacac 14657794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 25531677 - 25531620
Alignment:
Q  50 atttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||||||||||||||||| |||||| | ||| ||||||||||||||| ||||    
T  25531677 atttgcacttgctcaaagctaatcattcaaccttaatcaaataaacaccgcactaaga 25531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9137224 - 9137133
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    ||||||||||| ||||||||| |||| |||||||| ||      ||||||| ||||||| |||||||||||||||| ||| | ||| |||||||||||    
T  9137224 tctccggatctgcaacgttgacgacgccaaagtcaatg------atcgaatatgcactttctcaaagctaatcttttaaccttaatcaaataaacacc 9137133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17222343 - 17222306
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  17222343 tctccggatctacaacgttgatgacgccaaagtcattg 17222306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 5238190 - 5238118
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    ||||||||| |||| |||| ||| | |||| |||||||||||| ||||| ||||||| ||||||| |||||||    
T  5238190 gtcattgattgaatctgcatttggttaaagttaatctttcaacctgaatcaaataaataccgcaccaagacgg 5238118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 25112746 - 25112678
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    |||||||| || ||||||||||||||| |||||||||||| | ||| ||||||||| || || ||||||    
T  25112746 attgatcggatatgcacttgctcaaagttaatctttcaacttaaatcaaataaacatcgtactaagacg 25112678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 28664966 - 28665014
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  28664966 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 28665014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 45482131 - 45482083
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||||    
T  45482131 tatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggag 45482083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 6496126 - 6496071
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||||| || |||||||| |||||| |||||||||||| ||||| |||||||||    
T  6496126 attgatcggatctgcacttgttcaaagttaatctttcaacctgaatcaaataaaca 6496071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 40476973 - 40476938
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||||||||| |||||||||||||||||||    
T  40476973 tccggatctacaacgtggatgacgtcaaagtcattg 40476938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 32116467 - 32116537
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacg 109  Q
    ||||| || ||||||||||||| ||||| ||||| ||||||| ||| | ||||||||| ||||| ||||||    
T  32116467 tcatttattgaatttgcacttgatcaaaactaatttttcaacgtgagtaaaataaacaacgcactaagacg 32116537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 37593333 - 37593284
Alignment:
Q  61 ctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||| ||||||| ||||| ||||||||||||||  |||||||    
T  37593333 ctcaaagctaatatttcaacctgaatcaaataaacaccgcattaagacgg 37593284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 37714713 - 37714644
Alignment:
Q  41 attgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||| |||| |||||||| |||||  |||||||||||| ||||| |||||||||  |||| |||||||    
T  37714713 attgattgaatctgcacttgatcaaaattaatctttcaacctgaatcaaataaacattgcactaagacgg 37714644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 2532208 - 2532172
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| |||||||||||||| |||||||||||    
T  2532208 ctccggatctgcaacgttgatgacgccaaagtcattg 2532172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 21603529 - 21603489
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  21603529 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 21603489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 27535523 - 27535483
Alignment:
Q  179 tatgtgaaatcactttt-caattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  27535523 tatgtgaaatcacttatacaattagaatagaaggaaaaaca 27535483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 32740820 - 32740780
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  32740820 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 32740780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 38273116 - 38273076
Alignment:
Q  61 ctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    |||||| ||||||||||||| ||||||||||||||| ||||    
T  38273116 ctcaaacctaatctttcaacctgaattaaataaacatcgca 38273076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 42644743 - 42644703
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  42644743 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 42644703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 8e-34; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2555197 - 2555306
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||| ||||| ||||||||||| |    
T  2555197 tctccggatctgcaacgttgatgacgtcaaagtcattgtcattgatcggatctgcactttctcaaagctaatatttcaacctgaatcaaataaacaccac 2555296  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  2555297 actaagacgg 2555306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6635522 - 6635413
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  6635522 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacttgaatcaaataaacaccgc 6635423  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  6635422 actaagacgg 6635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23428526 - 23428418
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| || | ||||||||||||||||||||||| || ||||| |||||||||||||    
T  23428526 tctccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttctacctgaatcaaataaacaccgc 23428427  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  23428426 actaagacg 23428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7771668 - 7771774
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  7771668 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacttgaatcaaataaacaccgc 7771767  T
Q  101 acaaaga 107  Q
    || ||||    
T  7771768 actaaga 7771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6281318 - 6281209
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||  |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  6281318 tctccggatctgcaacaatgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgc 6281219  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  6281218 actaagacgg 6281209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23881963 - 23882070
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||| || || |||||||||||| |||||||||||| ||||| |||||||||||||    
T  23881963 tctccggatctacaacattgacgacgccaaagtcattgtcattgatcggatctgtacttgctcaaagttaatctttcaacctgaatcaaataaacaccgc 23882062  T
Q  101 acaaagac 108  Q
    || |||||    
T  23882063 actaagac 23882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 17732237 - 17732339
Alignment:
Q  5 cggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaa 104  Q
    ||||||| ||| ||||| |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||| |    
T  17732237 cggatctgcaaggttgacgacgccaaagtcattgtcattgatcggatttacacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcacta 17732336  T
Q  105 aga 107  Q
    |||    
T  17732337 aga 17732339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 42609417 - 42609323
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||||||| |||||| || |||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  42609417 ctccggatctgcaacgtcgacgacaccaaagtcattgtcattgatcgaatatgcacttgctcaaagctaatctttcaacatgaatcaaataaaca 42609323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32347561 - 32347670
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||| ||||| |||| |||||| |||||||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||     
T  32347561 tctccggatctgcaatgttgacgacgccaaagttattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacttgaattaaataaacaccgt 32347660  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  32347661 actaagacgg 32347670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33164316 - 33164424
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||||| ||||| |||||||||||||    
T  33164316 tctccggatctgcaacgttgacgacg-caaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgc 33164414  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  33164415 actaagacgg 33164424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 3740629 - 3740530
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| |||| || | |||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  3740629 tccggatctgcaacattaacgacgccaaagtcattgtcattgatcggatctgcagttgctcaaagctaatctttcaacctgaattaaataaacaccgcac 3740530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11734666 - 11734775
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| || |||| |||| |||||||||||||||||  ||||| ||||||||| |||    
T  11734666 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcagttgcgcaaagctaatctttcaatctgaatcaaataaacatcgc 11734765  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  11734766 actaagacgg 11734775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 980889 - 980985
Alignment:
Q  14 aacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||| |||  ||||||||||||||||| ||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  980889 aacgttgacgacaccaaagtcattgtcattgctcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 980985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 3079187 - 3079290
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||| |||||||||||  |||| ||||||||| ||||| |||    
T  3079187 gatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagcaaatctttcaactcgaatcaaataaacatcgcactaag 3079286  T
Q  107 acgg 110  Q
    ||||    
T  3079287 acgg 3079290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 20483454 - 20483351
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||| | |||||||||||| || |||    
T  20483454 gatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgatcaaagctaatctttcaacttgagtcaaataaacaccgtactaag 20483355  T
Q  107 acgg 110  Q
    ||||    
T  20483354 acgg 20483351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 39179677 - 39179776
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||| | ||||||||| |||| ||||||||||||||||||||| || | |||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  39179677 tccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctagtctttcaacctgaatcaaataaacaccgcac 39179776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17331602 - 17331493
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||  ||||||||||||||||| ||| || ||| |||| ||||| ||||||||||||| ||||| |||||||||||||    
T  17331602 tctccggatctgcaacgttgacgacaccaaagtcattgtcattggtcggatctgctcttgttcaaaactaatctttcaacctgaatcaaataaacaccgc 17331503  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  17331502 actaagacgg 17331493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18654056 - 18653955
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| | || |||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  18654056 tctccagatctgctacattgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaacctaatttttcaacctgaatcaaataaacaccgc 18653957  T
Q  101 ac 102  Q
    ||    
T  18653956 ac 18653955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26294904 - 26295013
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||| | |||  ||||||||||||||||||||  || |||||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  26294904 tctccggatctgcaacgttaacgacaccaaagtcattgtcattgatcagatctgcacttgctcaaaactaatatttcaacctgaatcaaataaacaccgc 26295003  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  26295004 actaagacgg 26295013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42396360 - 42396468
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||||| ||| | ||||||| ||||||||| |||    
T  42396360 tctcaggatctgcaacgttgacgacgccaaagtcattgtcattgat-gaatatgcacttgctcaaagctaatatttgagcatgaatcaaataaacatcgc 42396458  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  42396459 actaagacgg 42396468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 17096094 - 17096197
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| || |||||| |||  ||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||| |||||||||||| || |||    
T  17096094 gatctgcaccgttgacgacaccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgtactaag 17096193  T
Q  107 acgg 110  Q
    ||||    
T  17096194 acgg 17096197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 27241336 - 27241241
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||| ||| |||||||    
T  27241336 tccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgatcaaagctaatctttgaacctgaatcaaacaaacacc 27241241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 29098057 - 29097954
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaag 106  Q
    ||||| ||||||||| |||| |||| |||||||||||||||| || ||| |||| ||||||||||| ||||||| ||||| ||||||||||||||| |||    
T  29098057 gatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgctcttgttcaaagctaatttttcaacctgaatcaaataaacaccgcactaag 29097958  T
Q  107 acgg 110  Q
    ||||    
T  29097957 acgg 29097954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 43494132 - 43494033
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| |||| |||| || ||||||||||||||||||||| | || ||||||||||||||| || ||||||||| ||||| |||||||||||||||    
T  43494132 tccggatctgcaacattgacgatgtcaaagtcattgtcattgattggatatgcacttgctcaaagttagtctttcaacctgaatcaaataaacaccgcac 43494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11858182 - 11858075
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| ||||||||| |||| | |||||||||  || ||||| || ||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  11858182 tctccggatctgcaacgttgacgacgcctaagtcattg--atcgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgc 11858085  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  11858084 actaagacgg 11858075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 177951 - 178051
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||  ||| ||||||||||||||||||||  || | ||||||||| |||||||||||||||| ||||| |||||||||||||    
T  177951 tctccggatctgcaacgttgacaacgccaaagtcattgtcattgatcagatctacacttgctc-aagctaatctttcaacctgaatcaaataaacaccgc 178049  T
Q  101 ac 102  Q
    ||    
T  178050 ac 178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17699827 - 17699733
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaac 95  Q
    ||||||||||| |||| |||| |||| |||||| |||||||||||||  || || ||||||||||||||||||||||||| ||||| ||||||||    
T  17699827 tctccggatctgcaacattgacgacgccaaagttattgtcattgatcagatctgtacttgctcaaagctaatctttcaacctgaatcaaataaac 17699733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28040903 - 28040797
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||| ||||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||||||||| |    
T  28040903 tctccgaatctgcaatgttgacgacgccaaagtcactgtcattgatcggatttgcacttgctcagagctaatatttaaacctgaatcaaataaacaccac 28040804  T
Q  101 acaaaga 107  Q
    || ||||    
T  28040803 actaaga 28040797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12439510 - 12439611
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||||| || |||  |||| |||| ||||||||||||| ||||||| || | |||||||||||||||||||||||||| | ||| |||||||||||||    
T  12439510 tctccggaactgcaatcttgacgacgccaaagtcattgtcgttgatcggatcttcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgc 12439609  T
Q  101 ac 102  Q
    ||    
T  12439610 ac 12439611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6681723 - 6681831
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||||||||| |||  |||| |||||||||||||||| |||||| ||| |||||| ||||||||||||| || |  ||||||||| |||    
T  6681723 tctccgaatctgcaacgttgacgacaccaaaatcattgtcattgatcggatttgcgcttactcaaaactaatctttcaacctggaacaaataaacatcgc 6681822  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  6681823 actaagacg 6681831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34431331 - 34431227
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| |||||  |||||||| |||| ||| ||||||||||||||||| || ||||||||||||||| |||||  ||||| ||||| |||||||||||||    
T  34431331 tctccagatctgtaacgttgacgacgacaa-gtcattgtcattgatcggatctgcacttgctcaaagttaatc--tcaacctgaatcaaataaacaccgc 34431235  T
Q  101 acaaagac 108  Q
    || |||||    
T  34431234 actaagac 34431227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39531259 - 39531352
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||| |||||| ||||||||| |||| ||||||||||  ||||||||| || ||||||| ||||||||||||||||||||  |||| |||||||||    
T  39531259 tctctggatctgcaacgttgacgacgccaaagtcatt--cattgatcggatctgcactttctcaaagctaatctttcaacccgaatcaaataaaca 39531352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 35402301 - 35402214
Alignment:
Q  7 gatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||||||||||||||| | |||| ||||||  ||||| ||||| |||||||| |||||| |||||||||||| ||||| |||||||||    
T  35402301 gatctacaacgttgatgatgccaaaatcattg--attgaccgaatctgcacttgttcaaagttaatctttcaacctgaatcaaataaaca 35402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39915761 - 39915666
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||||| |||| ||||||||| ||||||||||| ||||      || | || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39915761 tctccgaatcttcaacgttgacgacgtcaaagttattg------attggatatgcacttgctcaaagctaatctttcaacctgaataaaataaacaccgc 39915668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25962187 - 25962085
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||||||||||||| ||||  ||||||||||      |||  || |||||||||||||| ||||||||||||| ||||| |||||||||| ||    
T  25962187 tctccggatctacaacgttgacgacgcaaaagtcattg------atcagatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacactgc 25962094  T
Q  101 acaaagacg 109  Q
    || ||||||    
T  25962093 actaagacg 25962085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 12891898 - 12891844
Alignment:
Q  53 tgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||||||||||||||||||||| || || ||||||||||||||| ||||    
T  12891898 tgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcactaaga 12891844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 17523406 - 17523478
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||| || ||||||||||||| ||||| |||||||||| || ||||| ||||||||||||||  |||||||    
T  17523406 gtcattaattgaatttgcacttgatcaaaactaatctttcgacctgaatcaaataaacaccgcaataagacgg 17523478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 12215369 - 12215307
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgca 101  Q
    ||||||||||| || |||||||||||||| ||||||||||||| | ||| ||||||||||||||    
T  12215369 gtcattgatcggatatgcacttgctcaaaactaatctttcaac-taaatcaaataaacaccgca 12215307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17687473 - 17687381
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||||| |||| |||||||||||||||||||||      |||| || |||| |||||||||  |||||||||||  ||||| ||||||||||||    
T  17687473 tctccggatctgcaacattgatgacgtcaaagtcattg------atcggatatgcatttgctcaaatttaatctttcaatctgaatcaaataaacaccg 17687381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7151079 - 7150984
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    |||| |||||| |||||||||||||| |||||||||||      |||||||||| |||| |||||| | | ||||||||| ||||| ||||||||| |||    
T  7151079 tctctggatctgcaacgttgatgacgccaaagtcattg------atcgaatttgtacttactcaaaaccagtctttcaacctgaatcaaataaacatcgc 7150986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 42512843 - 42512939
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| |||||||||||||||||||||||||||  | |||| |     |||||| ||||||||||||| ||||| ||||| ||||||| |||| |||||||    
T  42512843 atctgcaacgttgatgacgtcaaagtcattgtt-tggatcaa-----cacttgatcaaagctaatctctcaacctgaatcaaataaataccgtacaaaga 42512936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 43493939 - 43493890
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggaga 227  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  43493939 tatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggaga 43493890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 35275888 - 35275942
Alignment:
Q  56 acttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaagacgg 110  Q
    |||||||||||||||| ||||||||  |||| ||||||||| |||| ||||||||    
T  35275888 acttgctcaaagctaacctttcaaccggaatcaaataaacatcgcataaagacgg 35275942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 39179882 - 39179920
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaa 216  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39179882 tatgtgaaatcacttattcaattagaatagaaggaaaaa 39179920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 39531631 - 39531676
Alignment:
Q  48 gaatttgcacttgctcaaagctaatctttcaacatgaattaaataa 93  Q
    ||||||||||||| | ||||||||||||||||| ||||| ||||||    
T  39531631 gaatttgcacttgattaaagctaatctttcaacctgaatcaaataa 39531676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40565003 - 40565040
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  40565003 tctccggatctgcaacgttgatgacgccaaagtcattg 40565040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 6074583 - 6074619
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| |||||||||||||| |||||||||||    
T  6074583 ctccggatctgcaacgttgatgacgccaaagtcattg 6074619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 32309389 - 32309345
Alignment:
Q  50 atttgcacttgctcaaagctaatctttcaacatgaattaaataaa 94  Q
    |||||||||||||||||| ||||||| |||| ||||| |||||||    
T  32309389 atttgcacttgctcaaagttaatcttacaacctgaatcaaataaa 32309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 34906376 - 34906332
Alignment:
Q  52 ttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||||||||||||||||| |||||||| | ||| |||||||||    
T  34906376 ttgcacttgctcaaagctaaactttcaaccttaatcaaataaaca 34906332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 1843 - 1739
Alignment:
Q  6 ggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaa 105  Q
    |||||| ||||||||| || | ||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  1843 ggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 1744  T
Q  106 gacgg 110  Q
    |||||    
T  1743 gacgg 1739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 35356 - 35250
Alignment:
Q  3 tccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||| ||||||||| |||| |||||||||||||| || ||| ||||||||||||||||||||||| ||||||| | ||| |||||||||||||||    
T  35356 tccggatctgcaacgttgacgacgccaaagtcattgtcaatggtcggatttgcacttgctcaaagctaatatttcaacctaaatcaaataaacaccgcac 35257  T
Q  103 aaagacg 109  Q
     ||||||    
T  35256 taagacg 35250  T

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Target: scaffold0155; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 35149 - 35102
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcgga 225  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  35149 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgga 35102  T

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Target: scaffold0056 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 74438 - 74344
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaac 95  Q
    ||||||||||| ||||||||| || | ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||    
T  74438 tctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 74344  T

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Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 74231 - 74191
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaaca 218  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  74231 tatgtgaaatcacttattcaattaggatagaaggaaaaaca 74191  T

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Target: scaffold0294 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3914 - 4023
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||| ||||| ||||||||| || | |||||||||| |||||||||  || |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3914 tctccagatctgcaacgttgacgatgccaaagtcattttcattgatcagatctgcacttgctcaaagctaatatttcaacctgaattaaataaacaccgc 4013  T
Q  101 acaaagacgg 110  Q
    || |||||||    
T  4014 actaagacgg 4023  T

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Target: scaffold0536 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3174 - 3076
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccg 99  Q
    ||||||||| | ||||||||| |||  ||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  3174 tctccggatttgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccg 3076  T

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Target: scaffold1379 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 222 - 143
Alignment:
Q  28 caaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||||||||||||||||| |  || |||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||    
T  222 caaagtcattgtcattgaccagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 143  T

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Target: scaffold1379; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 936 - 1031
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgc 100  Q
    ||||||||||| |||||||||||||  ||||||||      |||||||||| |||| || |||||||||||||||||||| ||||| ||||| |||||||    
T  936 tctccggatctgcaacgttgatgacaccaaagtca------ttgatcgaatctgcagtttctcaaagctaatctttcaacctgaatcaaatatacaccgc 1029  T

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Target: scaffold0312 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 6404 - 6302
Alignment:
Q  8 atctacaacgttgatgacgtcaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcacaaaga 107  Q
    |||| ||||||||| |||| | ||  |||||||||||||||||| ||||||||  ||||| |||||||||||| |  || |||||||||||| || ||||    
T  6404 atctgcaacgttgacgacgcctaacccattgtcattgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaaga 6305  T
Q  108 cgg 110  Q
    |||    
T  6304 cgg 6302  T

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Target: scaffold0312; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 6204 - 6156
Alignment:
Q  179 tatgtgaaatcactt-ttcaattagaatagaaggaaaaacagctcggag 226  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  6204 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 6156  T

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Target: scaffold0321 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 7008 - 7072
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacaccgcac 102  Q
    ||||||||||| || ||||||||||| |||||||||||| |||  ||||||||||||||| ||||    
T  7008 gtcattgatcggatctgcacttgctccaagctaatcttttaacccgaattaaataaacactgcac 7072  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 404139 - 404198
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaacacc 98  Q
    |||||||||||||| ||||| ||||||||||| |||||||||| ||||| |||||||||||    
T  404139 gtcattgatcgaatctgcacatgctcaaagct-atctttcaacctgaatcaaataaacacc 404198  T

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Target: scaffold0999 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 1941 - 1900
Alignment:
Q  38 gtcattgatcgaatttgcacttgctcaaagctaatctttcaa 79  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  1941 gtcattgatcggatctgcacttgctcaaagctaatctttcaa 1900  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 201936 - 201993
Alignment:
Q  39 tcattgatcgaatttgcacttgctcaaagctaatctttcaacatgaattaaataaaca 96  Q
    |||||||| |||||| |||||| ||||||||||| ||||||| ||||| |||||||||    
T  201936 tcattgattgaattttcacttgttcaaagctaatatttcaacctgaatcaaataaaca 201993  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11282 - 11245
Alignment:
Q  1 tctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  11282 tctccggatctgcaacgtggatgacgtcaaagtcattg 11245  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 105307 - 105271
Alignment:
Q  2 ctccggatctacaacgttgatgacgtcaaagtcattg 38  Q
    |||||||||| |||||||||||||| |||||||||||    
T  105307 ctccggatctgcaacgttgatgacgccaaagtcattg 105271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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