View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13108_high_6 (Length: 597)
Name: NF13108_high_6
Description: NF13108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13108_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 554; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 1 - 582
Target Start/End: Original strand, 40983605 - 40984186
Alignment:
| Q |
1 |
tatgtgtatcattgaccaatttcatcatttacctctctcctagaagtgaaatattccttgcatattccccgccattctgttttactctcgatatgaaaga |
100 |
Q |
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| T |
40983605 |
tatgtgtatcattgcccaatttcatcatttccctctctcctagaagtgaaatattccttgcatattccccgccattctgttttactctcgatatgaaaga |
40983704 |
T |
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| Q |
101 |
ctgtccatgagaatgagtggcattgctatcagaagccaatttgcatgataatccgcagattacatcatttagaattgactgatcagagatgcctgaagca |
200 |
Q |
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| T |
40983705 |
ctgtctgtgagaatgagtggcatcgctatcagaagccaatttgcatgataattcgcagattacatcatttagaattgactgatcagagatgcctgaagca |
40983804 |
T |
|
| Q |
201 |
gagactgaggtgccacttccatgtaaatcatcaaacttgctgaacagataagaggcaccccatttaagcagggtgtgaatactgctctggtttagctgca |
300 |
Q |
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| T |
40983805 |
gagactgaggtgccacttccatgtaaatcatcaaacttgctgaacagataagaggcaccccatttaagcagggtgtgaatactgctctggtttagctgca |
40983904 |
T |
|
| Q |
301 |
tatttctgtcgagagctataccttcttttgcaagcgctaaaaccttttcttcaacagttaagtatgagtacaatctcaagactgttagctgtttgaagtt |
400 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40983905 |
tatttctgtcgagagctataccctcttttgcaagcgctaaaaccttttcttcaacagttaagtatgagtacaatctcaagactgttagctgtttgaagtt |
40984004 |
T |
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| Q |
401 |
tgagctgattgacattttttgtacgcattttaggtcattttgcgggtccaaatcactgtcaaataatataatggtatcgacagatgagagcttaatgcta |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40984005 |
tgagctgattgacattttttgtacgcattttaggtcattttgcgggtccaaatcactgtcaaataatataatggtatcgacagatgagagcttaatgcta |
40984104 |
T |
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| Q |
501 |
gaggtacaagcacggttctctatcaagaaaacaaattttccactttctctgtcattaaatgtgtccaaagcagcttgattct |
582 |
Q |
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| T |
40984105 |
gaggtacaagcacggttctctatcaagaaaacaaattttccactttctctgtcattaaatgtgtccaaagcagcttgattct |
40984186 |
T |
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