View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13108_low_11 (Length: 540)

Name: NF13108_low_11
Description: NF13108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13108_low_11
NF13108_low_11
[»] chr3 (36 HSPs)
chr3 (317-525)||(47265323-47265531)
chr3 (68-250)||(47265079-47265257)
chr3 (1-56)||(42489618-42489673)
chr3 (1-56)||(36772774-36772829)
chr3 (1-56)||(45394382-45394437)
chr3 (1-56)||(45647774-45647829)
chr3 (1-56)||(47265037-47265092)
chr3 (1-56)||(49422302-49422357)
chr3 (1-56)||(170743-170798)
chr3 (1-56)||(2008682-2008737)
chr3 (1-56)||(11691593-11691648)
chr3 (1-56)||(11899718-11899773)
chr3 (1-56)||(11935997-11936052)
chr3 (1-56)||(15043494-15043549)
chr3 (1-56)||(20222073-20222128)
chr3 (1-56)||(21212055-21212110)
chr3 (1-56)||(29359036-29359091)
chr3 (1-56)||(33757405-33757460)
chr3 (1-56)||(34266298-34266353)
chr3 (1-56)||(34784537-34784592)
chr3 (1-56)||(36711035-36711090)
chr3 (1-56)||(40593832-40593887)
chr3 (1-56)||(42541488-42541543)
chr3 (1-56)||(42784369-42784424)
chr3 (1-56)||(42928625-42928680)
chr3 (1-56)||(45692916-45692971)
chr3 (1-56)||(46799530-46799585)
chr3 (1-56)||(50001323-50001378)
chr3 (1-56)||(54767641-54767696)
chr3 (1-56)||(55453835-55453890)
chr3 (1-38)||(17561475-17561512)
chr3 (15-56)||(35119315-35119356)
chr3 (3-56)||(35546605-35546658)
chr3 (3-56)||(42541277-42541330)
chr3 (3-56)||(54626906-54626959)
chr3 (8-56)||(20221858-20221906)
[»] chr8 (25 HSPs)
chr8 (1-56)||(38075198-38075253)
chr8 (1-56)||(28237509-28237564)
chr8 (1-56)||(32723922-32723977)
chr8 (1-56)||(32974048-32974103)
chr8 (1-56)||(34872657-34872712)
chr8 (1-56)||(43165771-43165826)
chr8 (1-56)||(44163972-44164027)
chr8 (1-56)||(4017725-4017780)
chr8 (1-56)||(4652293-4652348)
chr8 (1-56)||(7057411-7057466)
chr8 (1-56)||(7288011-7288066)
chr8 (1-56)||(8082516-8082571)
chr8 (1-56)||(8082731-8082786)
chr8 (1-56)||(10167512-10167567)
chr8 (1-56)||(10579037-10579092)
chr8 (1-56)||(10579252-10579307)
chr8 (1-56)||(13155639-13155694)
chr8 (1-56)||(15105044-15105099)
chr8 (1-56)||(32723707-32723762)
chr8 (1-56)||(36683337-36683392)
chr8 (1-56)||(41738696-41738751)
chr8 (1-39)||(28743416-28743454)
chr8 (1-55)||(32374996-32375050)
chr8 (1-39)||(41258952-41258990)
chr8 (3-56)||(11140659-11140712)
[»] chr7 (29 HSPs)
chr7 (1-56)||(37143112-37143167)
chr7 (1-56)||(11831993-11832048)
chr7 (1-56)||(27689511-27689566)
chr7 (1-56)||(30085339-30085394)
chr7 (1-56)||(33253802-33253857)
chr7 (1-56)||(37712419-37712474)
chr7 (1-56)||(38730442-38730497)
chr7 (1-56)||(40619686-40619741)
chr7 (1-56)||(44158152-44158207)
chr7 (2-39)||(8898086-8898123)
chr7 (1-56)||(19579008-19579063)
chr7 (1-56)||(21047565-21047620)
chr7 (1-56)||(21993995-21994050)
chr7 (1-56)||(22745051-22745106)
chr7 (1-56)||(23561140-23561195)
chr7 (1-56)||(26626473-26626528)
chr7 (1-56)||(37104984-37105038)
chr7 (1-56)||(37220172-37220227)
chr7 (1-56)||(39535123-39535178)
chr7 (1-56)||(40619899-40619954)
chr7 (1-56)||(41492555-41492610)
chr7 (1-56)||(41506323-41506378)
chr7 (1-56)||(43977629-43977684)
chr7 (1-56)||(47764433-47764488)
chr7 (1-56)||(48549563-48549618)
chr7 (1-55)||(2285366-2285420)
chr7 (1-55)||(44719536-44719590)
chr7 (1-37)||(29369028-29369064)
chr7 (4-56)||(44887531-44887583)
[»] chr5 (31 HSPs)
chr5 (1-56)||(25947706-25947761)
chr5 (1-56)||(35514755-35514810)
chr5 (1-56)||(5118417-5118472)
chr5 (1-56)||(5905061-5905116)
chr5 (1-56)||(7949130-7949185)
chr5 (1-56)||(29785619-29785674)
chr5 (2-56)||(24802068-24802122)
chr5 (2-56)||(38265344-38265398)
chr5 (1-53)||(6042549-6042601)
chr5 (1-56)||(857656-857711)
chr5 (1-56)||(1345144-1345199)
chr5 (1-56)||(2670961-2671016)
chr5 (1-56)||(7200878-7200933)
chr5 (1-56)||(7730784-7730839)
chr5 (1-56)||(9129757-9129812)
chr5 (1-56)||(10862403-10862458)
chr5 (1-56)||(14311136-14311191)
chr5 (1-56)||(14362702-14362757)
chr5 (1-56)||(18278846-18278901)
chr5 (1-56)||(18279061-18279116)
chr5 (1-56)||(18279328-18279383)
chr5 (1-56)||(19617917-19617972)
chr5 (1-56)||(21052310-21052365)
chr5 (1-56)||(21052525-21052580)
chr5 (1-56)||(22225323-22225378)
chr5 (1-56)||(27279758-27279813)
chr5 (1-56)||(30239238-30239293)
chr5 (1-56)||(37109555-37109610)
chr5 (1-56)||(41621382-41621437)
chr5 (1-56)||(42396806-42396861)
chr5 (1-39)||(25908467-25908505)
[»] chr2 (28 HSPs)
chr2 (1-56)||(5288376-5288431)
chr2 (5-56)||(19366506-19366557)
chr2 (1-56)||(128870-128925)
chr2 (1-56)||(5038363-5038418)
chr2 (1-56)||(13499845-13499900)
chr2 (1-56)||(14122442-14122497)
chr2 (1-56)||(14370145-14370200)
chr2 (1-56)||(33940303-33940358)
chr2 (1-55)||(17839147-17839201)
chr2 (1-56)||(725741-725796)
chr2 (1-56)||(1598901-1598956)
chr2 (1-56)||(2112405-2112460)
chr2 (1-56)||(4902249-4902304)
chr2 (1-56)||(4949647-4949702)
chr2 (1-56)||(10300353-10300408)
chr2 (1-56)||(11554273-11554328)
chr2 (1-56)||(16707207-16707262)
chr2 (1-56)||(17838932-17838987)
chr2 (1-56)||(18677065-18677120)
chr2 (1-56)||(29419533-29419588)
chr2 (1-56)||(31765200-31765255)
chr2 (1-56)||(36065931-36065986)
chr2 (1-56)||(41737857-41737912)
chr2 (1-56)||(41974459-41974514)
chr2 (2-56)||(5011423-5011477)
chr2 (1-39)||(12262759-12262797)
chr2 (1-39)||(41974264-41974302)
chr2 (1-45)||(16970900-16970944)
[»] chr1 (30 HSPs)
chr1 (1-56)||(5562860-5562915)
chr1 (1-56)||(43741344-43741399)
chr1 (1-56)||(512595-512650)
chr1 (1-56)||(1895694-1895749)
chr1 (1-56)||(6057140-6057195)
chr1 (1-56)||(33254163-33254218)
chr1 (1-56)||(33274335-33274390)
chr1 (1-56)||(33566798-33566853)
chr1 (1-56)||(35937681-35937736)
chr1 (1-56)||(51345641-51345696)
chr1 (1-39)||(3858080-3858118)
chr1 (1-55)||(42928840-42928894)
chr1 (1-37)||(13762864-13762900)
chr1 (1-56)||(3617140-3617195)
chr1 (1-56)||(5333498-5333553)
chr1 (1-56)||(5333708-5333763)
chr1 (1-56)||(6056804-6056859)
chr1 (1-56)||(14421718-14421773)
chr1 (1-56)||(26922383-26922438)
chr1 (1-56)||(30925439-30925494)
chr1 (1-56)||(33253947-33254002)
chr1 (1-56)||(33274119-33274174)
chr1 (1-56)||(34340793-34340848)
chr1 (1-56)||(46136620-46136675)
chr1 (1-56)||(49804156-49804211)
chr1 (1-56)||(49804339-49804394)
chr1 (1-56)||(51053735-51053790)
chr1 (1-39)||(51194818-51194856)
chr1 (1-50)||(220157-220206)
chr1 (1-37)||(3268355-3268391)
[»] scaffold0233 (1 HSPs)
scaffold0233 (1-56)||(18425-18480)
[»] chr6 (21 HSPs)
chr6 (1-56)||(16539263-16539318)
chr6 (1-56)||(17205211-17205266)
chr6 (1-56)||(18030868-18030923)
chr6 (1-56)||(24045932-24045987)
chr6 (1-56)||(25059542-25059597)
chr6 (1-56)||(4062592-4062647)
chr6 (1-56)||(7466337-7466392)
chr6 (1-56)||(9242384-9242439)
chr6 (1-56)||(12145323-12145378)
chr6 (1-56)||(12757458-12757513)
chr6 (1-56)||(14863802-14863857)
chr6 (1-56)||(15837404-15837459)
chr6 (1-56)||(18328066-18328121)
chr6 (1-56)||(18501727-18501782)
chr6 (1-56)||(22787421-22787476)
chr6 (1-56)||(25059358-25059413)
chr6 (1-56)||(32462126-32462181)
chr6 (1-56)||(32647201-32647256)
chr6 (1-38)||(650114-650151)
chr6 (3-56)||(5359872-5359925)
chr6 (1-53)||(31842648-31842700)
[»] chr4 (29 HSPs)
chr4 (1-56)||(11997399-11997454)
chr4 (1-56)||(32806986-32807041)
chr4 (1-56)||(35804382-35804437)
chr4 (1-39)||(12919494-12919532)
chr4 (1-49)||(36157473-36157521)
chr4 (1-56)||(1842424-1842479)
chr4 (1-56)||(3060569-3060624)
chr4 (1-56)||(6452223-6452278)
chr4 (1-56)||(8412307-8412362)
chr4 (1-56)||(8459351-8459406)
chr4 (1-56)||(10590612-10590667)
chr4 (1-56)||(11338945-11339000)
chr4 (1-56)||(22519525-22519580)
chr4 (1-56)||(23275057-23275112)
chr4 (1-56)||(27704512-27704567)
chr4 (1-56)||(29520684-29520739)
chr4 (1-56)||(35023351-35023406)
chr4 (1-56)||(35023565-35023620)
chr4 (1-56)||(42513442-42513497)
chr4 (1-56)||(48148955-48149009)
chr4 (1-56)||(49487996-49488051)
chr4 (1-56)||(50309631-50309686)
chr4 (1-39)||(11997613-11997651)
chr4 (2-56)||(13128483-13128537)
chr4 (2-56)||(23257180-23257234)
chr4 (1-39)||(35910785-35910823)
chr4 (1-39)||(44258723-44258761)
chr4 (8-56)||(44595962-44596010)
chr4 (8-56)||(48737900-48737948)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-39)||(352626-352664)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-56)||(26452-26507)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-56)||(22194-22249)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-56)||(49019-49074)
[»] scaffold0012 (1 HSPs)
scaffold0012 (9-56)||(47349-47396)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-56)||(262641-262696)


Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 317 - 525
Target Start/End: Original strand, 47265323 - 47265531
Alignment:
Q  317 gattcgtggattaggaaactgaattaaatgataattgagagatttaaggaagaagagtcctatcattccactcttcgttttctctgttccaaaaaagaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47265323 gattcgtggattaggaaactgaattaaatgataattgagagatttaaggaagaagagtcctatcattccactcttcgttttctctgttccaaaaaagaac 47265422  T
Q  417 aagaacaaaatggttgagactcgctctgcaaagaggaaaaccaacgaaacccaaaatcacatgaataaacgtgtcgtgttgggtgaacttcccaattcaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47265423 aagaacaaaatggttgagactcgctctgcaaagaggaaaaccaacgaaacccaaaatcacatgaacaaacgtgtcgtgttgggtgaacttcccaattcaa 47265522  T
Q  517 caaccaatc 525  Q
    |||||||||    
T  47265523 caaccaatc 47265531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 47265079 - 47265257
Alignment:
Q  68 aactaaaaacttaattaaccctctcgtctgaataaacatttgtattataattttattttggttacccgatagcatttatttattgtattgggacnnnnnn 167  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          
T  47265079 aactaaaaacttaattaaccctc--gtctaaataaacatttgtattatacttttattttggttacccgatagcatttatttattgtattgggacggggg- 47265175  T
Q  168 nagaggaaagagcggcaaccagcccgctatatgaaatcgtaattaaactttagttctgaaactaaaatattcaattactccgc 250  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47265176 -agaggaaagagcggcaaccagcccgctatatgaaatcgtaattaaactttagttctgaaactaaaatattcaattactccgc 47265257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42489673 - 42489618
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||    
T  42489673 tattttgtagggactaaaaacaaaactgtgaatatttatagaaactaaaaacttaa 42489618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36772774 - 36772829
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  36772774 tattttgtagggactaaaaacaaaactatgaatatttatagggactaaaaacttaa 36772829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45394382 - 45394437
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||| ||||||| | ||||||||| ||||||||||||||||    
T  45394382 tattttgtagggactaaaaccaaaactgtgaatatttatagaaactaaaaacttaa 45394437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45647774 - 45647829
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| | || |||||||||||    
T  45647774 tattttgtagggactaaaaacaaaactgtaaatatttataggaattaaaaacttaa 45647829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47265037 - 47265092
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||| ||||||||||||||||||||  |||||||||  |||||||||||||||    
T  47265037 tattttgcagggattaaaaacaaaactaagaatatttataaaaactaaaaacttaa 47265092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49422357 - 49422302
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  49422357 tattttgtagggattaaaaacaaaactgtgaatatttataggcactaaaaacttaa 49422302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 170798 - 170743
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  170798 tattttgtaaggactaaaaacaaaactatgaatatttatagggactaaaaacttaa 170743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2008737 - 2008682
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  2008737 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 2008682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11691648 - 11691593
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  11691648 tattttgtaaggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 11691593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11899773 - 11899718
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | | ||||||||| | ||||||||||||||    
T  11899773 tattttgtagggactaaaaacaaaattgtgaatatttataggaactaaaaacttaa 11899718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11935997 - 11936052
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  11935997 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 11936052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15043549 - 15043494
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||||||||||||||||| |||||||||||    |||||||||||||    
T  15043549 tattttgtaaggattaaaaacaaaactgtaaatatttataaggactaaaaacttaa 15043494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20222073 - 20222128
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  20222073 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 20222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21212055 - 21212110
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  21212055 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 21212110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29359091 - 29359036
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  29359091 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 29359036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33757460 - 33757405
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | | ||||||||| || |||||||||||||    
T  33757460 tattttgtagggactaaaaacaaaattgtgaatatttatagagactaaaaacttaa 33757405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34266298 - 34266353
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| | |||||||||||  |||||||||||||    
T  34266298 tattttgtatggactaaaaacaaaactgtgaatatttattggtactaaaaacttaa 34266353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34784592 - 34784537
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  34784592 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 34784537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36711035 - 36711090
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||||||||||||||||| | ||||||||| |  |||||||||||||    
T  36711035 tattttgtaaggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 36711090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40593832 - 40593887
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  40593832 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 40593887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42541488 - 42541543
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||||||||||||||||| | ||||||||| |  |||||||||||||    
T  42541488 tattttgtaaggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 42541543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42784424 - 42784369
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | |||||||||||  ||||||| |||||    
T  42784424 tattttgtagggactaaaaacaaaactgtgaatatttattggcactaaaaccttaa 42784369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42928625 - 42928680
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| ||||||||||||||| | ||||||||| |  |||||||||||||    
T  42928625 tattttgtaggaattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 42928680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45692971 - 45692916
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  45692971 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 45692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46799530 - 46799585
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||  |||||||||||||||| | ||||||||| | ||||||||||||||    
T  46799530 tattttgtactgattaaaaacaaaactgtgaatatttataggaactaaaaacttaa 46799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50001323 - 50001378
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  50001323 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 50001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 54767696 - 54767641
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||| |||||| ||||||||||| |  |||||||||||||    
T  54767696 tattttgtagggactaaaaagaaaactgtaaatatttatagggactaaaaacttaa 54767641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 55453835 - 55453890
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||| |||||||||||||||| | ||||||||| |  |||||||||||||    
T  55453835 tattttgtagagattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 55453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17561475 - 17561512
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatattta 38  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  17561475 tattttgtagggactaaaaacaaaattataaatattta 17561512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 35119356 - 35119315
Alignment:
Q  15 taaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||| |  |||||||||||||    
T  35119356 taaaaacaaaactataaatatttatagggactaaaaacttaa 35119315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 35546658 - 35546605
Alignment:
Q  3 ttttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  35546658 ttttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 35546605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 42541330 - 42541277
Alignment:
Q  3 ttttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||| | ||||||| | |  |||||||||||||    
T  42541330 ttttgtagggattaaaaacaaaactgtgaatatttttagggactaaaaacttaa 42541277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 54626959 - 54626906
Alignment:
Q  3 ttttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||| |  | |||||||| ||||| ||||||||||    
T  54626959 ttttgtagggattaaaaacaaaattgcagatatttatagaaacgaaaaacttaa 54626906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 20221906 - 20221858
Alignment:
Q  8 tagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  20221906 tagggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 20221858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38075198 - 38075253
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  38075198 tattttgtagggactaaaaacaaaactataaatatttataggtactaaaaacttaa 38075253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28237509 - 28237564
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  28237509 tattttgtagggactaaaaacaaaactatgaatatttatagggactaaaaacttaa 28237564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32723922 - 32723977
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | ||||||||||||| ||||||||||| | ||||||||||||||    
T  32723922 tattttgtaggaactaaaaacaaaactgtaaatatttataggaactaaaaacttaa 32723977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32974103 - 32974048
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | ||||||||||||||||||||||||| |  |||||||||||||    
T  32974103 tattttgtaggaactaaaaacaaaactataaatatttatagggactaaaaacttaa 32974048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34872657 - 34872712
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  34872657 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 34872712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43165771 - 43165826
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  43165771 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 43165826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44164027 - 44163972
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  44164027 tattttgtagggattaaaaacaaaactgtcaatatttatagggactaaaaacttaa 44163972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4017725 - 4017780
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  4017725 tattttgtagggactaaaaacaaaactgtgaatatttataggcactaaaaacttaa 4017780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4652348 - 4652293
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| |   ||||||||||||    
T  4652348 tattttgtagggactaaaaacaaaactatgaatatttatagggcctaaaaacttaa 4652293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7057411 - 7057466
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  7057411 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 7057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7288066 - 7288011
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  7288066 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 7288011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8082571 - 8082516
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | || |||||| | ||||||||||||||    
T  8082571 tattttgtagggactaaaaacaaaactgtgaacatttataggaactaaaaacttaa 8082516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8082731 - 8082786
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  8082731 tattttgtagggactaaaaacaaaattctaaatatttatagggactaaaaacttaa 8082786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10167567 - 10167512
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  10167567 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 10167512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10579092 - 10579037
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  10579092 tattttgtagggactaaaaacaaaattctaaatatttatagggactaaaaacttaa 10579037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10579252 - 10579307
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  10579252 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 10579307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13155639 - 13155694
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  13155639 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 13155694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15105044 - 15105099
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  15105044 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 15105099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32723762 - 32723707
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  32723762 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 32723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36683337 - 36683392
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  36683337 tattttgtagggactaaaaacaaaactttgaatatttatagggactaaaaacttaa 36683392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41738751 - 41738696
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  41738751 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 41738696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28743416 - 28743454
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  28743416 tattttgtagggactaaaaacaaaactgtaaatatttat 28743454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32374996 - 32375050
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaactta 55  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  ||||||||||||    
T  32374996 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaactta 32375050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41258952 - 41258990
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  41258952 tattttgtagggactaaaaacaaaattataaatatttat 41258990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 11140712 - 11140659
Alignment:
Q  3 ttttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  11140712 ttttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 11140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37143167 - 37143112
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  37143167 tattttgtagggactaaaaacaaaattctaaatatttatagaaactaaaaacttaa 37143112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11832048 - 11831993
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||    
T  11832048 tattttgtagggactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 11831993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27689511 - 27689566
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||||||||||  |||||||||| || |||||||||||||    
T  27689511 tattttgtagggactaaaaacaaaactgcaaatatttatagagactaaaaacttaa 27689566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30085394 - 30085339
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  30085394 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 30085339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33253802 - 33253857
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  33253802 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 33253857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37712474 - 37712419
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  37712474 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 37712419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38730442 - 38730497
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| |||||||||||  | |||||||||||||    
T  38730442 tattttgtagggactaaaaacaaaactgtaaatatttataaagactaaaaacttaa 38730497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40619741 - 40619686
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  40619741 tattttgtagggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 40619686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44158152 - 44158207
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  44158152 tattttgtagggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 44158207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 8898123 - 8898086
Alignment:
Q  2 attttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8898123 attttgtagggattaaaaataaaactataaatatttat 8898086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19579063 - 19579008
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||| ||||||||||||||| |||||| ||||||||||| |  |||||||||||||    
T  19579063 tattctgtagggattaaaaataaaactgtaaatatttatagggactaaaaacttaa 19579008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21047620 - 21047565
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  21047620 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 21047565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21993995 - 21994050
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||| |||||||||||||||| | ||||||||| |  |||||||||||||    
T  21993995 tattttgtagagattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 21994050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22745106 - 22745051
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| | ||||||||| | ||||||||||||||    
T  22745106 tattttatagggactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 22745051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23561140 - 23561195
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | |||||||||    |||||||||||||    
T  23561140 tattttgtagggattaaaaacaaaactgtgaatatttatacggactaaaaacttaa 23561195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26626473 - 26626528
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | ||||||||||| | ||||||||||| | ||||||||||||||    
T  26626473 tattttgtaggaactaaaaacaaaattctaaatatttataggaactaaaaacttaa 26626528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37105038 - 37104984
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  37105038 tattttgtagggactaaaaacaaaactatgaatatttatag-gactaaaaacttaa 37104984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37220227 - 37220172
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  37220227 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 37220172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39535123 - 39535178
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  39535123 tattttgtagggactaaaaacaaaattctaaatatttatagggactaaaaacttaa 39535178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40619899 - 40619954
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| |||||||||||    |||||||||||||    
T  40619899 tattttgtagggactaaaaacaaaactgtaaatatttataaggactaaaaacttaa 40619954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41492555 - 41492610
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  41492555 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 41492610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41506378 - 41506323
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||  ||| ||||||||||||    
T  41506378 tattttgtagggactaaaaacaaaactgtgaatatttacggaagctaaaaacttaa 41506323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43977629 - 43977684
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  43977629 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 43977684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47764488 - 47764433
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||| |||| | |||||||||||||  |||||||||||||    
T  47764488 tattttgtagggactaaaaataaaattgtaaatatttattgggactaaaaacttaa 47764433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48549618 - 48549563
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||| |||| ||||||||||||| | ||||||||| || |||||||||||||    
T  48549618 tattttgttgggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 48549563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2285420 - 2285366
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaactta 55  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  ||||||||||||    
T  2285420 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaactta 2285366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44719590 - 44719536
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaactta 55  Q
    |||||||||| || ||||||||||||| ||||||||||| |  ||||||||||||    
T  44719590 tattttgtagagactaaaaacaaaactgtaaatatttatagggactaaaaactta 44719536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29369028 - 29369064
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatattt 37  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  29369028 tatttagtaaggattaaaaacaaaactataaatattt 29369064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 44887531 - 44887583
Alignment:
Q  4 tttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||| | ||||||||||||| ||||||||||| |  |||||||||||||    
T  44887531 tttgtaggaactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 44887583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25947761 - 25947706
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||    
T  25947761 tattttgtagggaataaaaacaaaactgtgaatatttattggaactaaaaacttaa 25947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35514810 - 35514755
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| ||||||||||| |  |||||||||||||    
T  35514810 tattttgtagggattaaaaacaaaactgtaaatatttatagggactaaaaacttaa 35514755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5118472 - 5118417
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  5118472 tattttgtagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 5118417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5905061 - 5905116
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  5905061 tattttgtagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 5905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7949130 - 7949185
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  7949130 tattttgtagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 7949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29785674 - 29785619
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  29785674 tattttgtagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 29785619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 24802122 - 24802068
Alignment:
Q  2 attttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  24802122 attttgtagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 24802068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 38265398 - 38265344
Alignment:
Q  2 attttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||||| |||||||||||||  |||||||||| || |||||||||||||    
T  38265398 attttgtagggactaaaaacaaaactgcaaatatttatagagactaaaaacttaa 38265344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6042601 - 6042549
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaact 53  Q
    ||||||||||||| ||||||||||||| | ||||||||| || ||||||||||    
T  6042601 tattttgtagggactaaaaacaaaactgtgaatatttatagagactaaaaact 6042549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 857656 - 857711
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| ||||||||||||||| | ||||||||| |  |||||||||||||    
T  857656 tattttgtaggaattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 857711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1345144 - 1345199
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| |||||||| || |  | |||||||||||    
T  1345144 tattttgtagggattaaaaacaaaactgtaaatattaatagggattaaaaacttaa 1345199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2671016 - 2670961
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||||||||| || ||||||||| |  |||||||||||||    
T  2671016 tattttgtagggactaaaaacaaaaccatgaatatttatagggactaaaaacttaa 2670961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7200933 - 7200878
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  7200933 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 7200878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7730784 - 7730839
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  7730784 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 7730839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9129812 - 9129757
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||| ||||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  9129812 tattttgaagggactaaaaacaaaactatgaatatttatagggactaaaaacttaa 9129757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10862403 - 10862458
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  10862403 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 10862458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14311191 - 14311136
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  14311191 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 14311136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14362702 - 14362757
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||||| ||||||||| | || |||||||||||    
T  14362702 tattttgtaaggactaaaaacaaaactatgaatatttataggaattaaaaacttaa 14362757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18278901 - 18278846
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  18278901 tattttgtagggactaaaaacaaaattctaaatatttatagggactaaaaacttaa 18278846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18279061 - 18279116
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  18279061 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 18279116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18279383 - 18279328
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  18279383 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 18279328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19617972 - 19617917
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  19617972 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 19617917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21052365 - 21052310
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  21052365 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 21052310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21052525 - 21052580
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  21052525 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 21052580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22225378 - 22225323
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  22225378 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 22225323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27279813 - 27279758
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  27279813 tattttgtagggagtaaaaacaaaactgtgaatatttatagggactaaaaacttaa 27279758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30239293 - 30239238
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  30239293 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 30239238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37109555 - 37109610
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  37109555 tattttgtagggactaaaaacaaaattgtaaatatttatagggactaaaaacttaa 37109610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41621437 - 41621382
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  41621437 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 41621382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42396861 - 42396806
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  42396861 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 42396806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25908505 - 25908467
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  25908505 tattttgtagggattaaaaacaaaattctaaatatttat 25908467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5288376 - 5288431
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | |||||||||||||||||||||||||||| | |||||||||||    
T  5288376 tattttgtaggaactaaaaacaaaactataaatatttattgagattaaaaacttaa 5288431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19366506 - 19366557
Alignment:
Q  5 ttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  19366506 ttgtagggattaaaaacaaaactgtaaatatttataggaactaaaaacttaa 19366557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 128870 - 128925
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  128870 tattttgtagggactaaaaacaaaactatgaatatttatagggactaaaaacttaa 128925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5038363 - 5038418
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  5038363 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 5038418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13499900 - 13499845
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||    
T  13499900 tattttgtagggactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 13499845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14122442 - 14122497
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||    
T  14122442 tattttgtagggactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 14122497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14370145 - 14370200
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  14370145 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 14370200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33940358 - 33940303
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||||||||||||||||| ||||||||||| |  |||||||||||||    
T  33940358 tattttgtaaggattaaaaacaaaactgtaaatatttatagggactaaaaacttaa 33940303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17839147 - 17839201
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaactta 55  Q
    ||||||||||||| ||||||||||||||| ||||||||| |  ||||||||||||    
T  17839147 tattttgtagggactaaaaacaaaactatgaatatttatagggactaaaaactta 17839201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 725741 - 725796
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||  ||||||||||| |  |||||||||||||    
T  725741 tattttgtagggactaaaaacaaaaccgtaaatatttatagggactaaaaacttaa 725796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1598901 - 1598956
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  1598901 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 1598956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2112460 - 2112405
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  2112460 tattttatagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 2112405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4902304 - 4902249
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||| ||||    
T  4902304 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaatttaa 4902249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4949702 - 4949647
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||| ||||    
T  4949702 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaatttaa 4949647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10300408 - 10300353
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  10300408 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 10300353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11554328 - 11554273
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  11554328 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 11554273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16707207 - 16707262
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  16707207 tattttatagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 16707262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17838987 - 17838932
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||| ||||||    
T  17838987 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaatacttaa 17838932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18677120 - 18677065
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  18677120 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 18677065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29419533 - 29419588
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  29419533 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 29419588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31765200 - 31765255
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||| | | ||||||||| |  |||||||||||||    
T  31765200 tattttgtagggattaaaaacaaaattgtgaatatttatagggactaaaaacttaa 31765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36065931 - 36065986
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  36065931 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 36065986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41737912 - 41737857
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| ||||||||||||  |  |||||||||||||    
T  41737912 tattttgtagggactaaaaacaaaattataaatatttacagggactaaaaacttaa 41737857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41974459 - 41974514
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | ||||||||||||| | ||||||||| | ||||||||||||||    
T  41974459 tattttgtaggaactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 41974514  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 5011477 - 5011423
Alignment:
Q  2 attttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||||||||||||||||||| | ||||||||| |  |||||||| ||||    
T  5011477 attttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaatttaa 5011423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12262797 - 12262759
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  12262797 tattttgtagggattaaaaacaaaattctaaatatttat 12262759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41974302 - 41974264
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  41974302 tattttgtagggactaaaaacaaaattataaatatttat 41974264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16970944 - 16970900
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaac 45  Q
    ||||||||||||| ||||||||||| | ||||||||||| |||||    
T  16970944 tattttgtagggactaaaaacaaaattctaaatatttatagaaac 16970900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5562860 - 5562915
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| || |||||||||||||    
T  5562860 tattttgtagggactaaaaacaaaactgtaaatatttatagagactaaaaacttaa 5562915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43741344 - 43741399
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| || |||||||||||||    
T  43741344 tattttgtagggactaaaaacaaaactatgaatatttatagagactaaaaacttaa 43741399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 512650 - 512595
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| | || |||||||||||    
T  512650 tattttgtagggactaaaaacaaaactatgaatatttataggaattaaaaacttaa 512595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1895749 - 1895694
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  1895749 tattttgtagggactaaaaacaaaactatgaatatttatagggactaaaaacttaa 1895694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6057195 - 6057140
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  6057195 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 6057140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33254163 - 33254218
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  33254163 tattttgtagggagtaaaaacaaaactgtgaatatttatagagactaaaaacttaa 33254218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33274335 - 33274390
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  33274335 tattttgtagggagtaaaaacaaaactgtgaatatttatagagactaaaaacttaa 33274390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33566853 - 33566798
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||||||||||||||| | ||||||||||| || |||||||||||||    
T  33566853 tattttatagggattaaaaacaaaattttaaatatttatagagactaaaaacttaa 33566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35937736 - 35937681
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  35937736 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 35937681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51345641 - 51345696
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||||||||| |||||||||||| |  |||||||||||||    
T  51345641 tattttgtagggactaaaaacaaaaccataaatatttatagggactaaaaacttaa 51345696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3858080 - 3858118
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3858080 tattttgtagggattaaaaacaaaactatgaatatttat 3858118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42928840 - 42928894
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaactta 55  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||    
T  42928840 tattttgtagggactaaaaacaaaactgtaaatatttatagggactaaaaactta 42928894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13762864 - 13762900
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatattt 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13762864 tattttgtagggattaaaaacaaaactgtaaatattt 13762900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3617195 - 3617140
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  3617195 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 3617140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5333553 - 5333498
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  5333553 tattttgtagggactaaaaacaaaaatgtaaatatttatagggactaaaaacttaa 5333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5333708 - 5333763
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| || | |||||||||||    
T  5333708 tattttgtagggactaaaaacaaaattgtaaatatttatagagattaaaaacttaa 5333763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6056859 - 6056804
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  6056859 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 6056804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14421718 - 14421773
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  14421718 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 14421773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26922383 - 26922438
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| | ||||||||| || |||||||||||||    
T  26922383 tattttgtaaggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 26922438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30925494 - 30925439
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||| || ||||||||||||||| ||||||||| |  |||||||||||||    
T  30925494 tattttgtagagactaaaaacaaaactatgaatatttatagggactaaaaacttaa 30925439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33254002 - 33253947
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| | ||||||||| || |||||||||||||    
T  33254002 tattttgtaaggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 33253947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33274174 - 33274119
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| | ||||||||| || |||||||||||||    
T  33274174 tattttgtaaggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 33274119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34340793 - 34340848
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  ||| |||||||||    
T  34340793 tattttgtagggactaaaaacaaaactgtaaatatttatagggactgaaaacttaa 34340848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46136675 - 46136620
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| | ||||||||| ||||| ||||||||||    
T  46136675 tattttatagggactaaaaacaaaactgtgaatatttatagaaacaaaaaacttaa 46136620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49804211 - 49804156
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  49804211 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 49804156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49804339 - 49804394
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||| || ||||||||||||| ||||||||||| |  |||||||||||||    
T  49804339 tattttgtagagactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 49804394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51053735 - 51053790
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||||| |||| | ||||||||| ||||| ||||||||||    
T  51053735 tattttgtagggactaaaaacagaactgtgaatatttatagaaacaaaaaacttaa 51053790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51194856 - 51194818
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  51194856 tattttgtagggactaaaaacaaaattataaatatttat 51194818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 220157 - 220206
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaa 50  Q
    ||||||||||||| ||||||||||||| | ||||||||| | ||||||||    
T  220157 tattttgtagggactaaaaacaaaactgtgaatatttataggaactaaaa 220206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3268391 - 3268355
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatattt 37  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  3268391 tattttgtagggactaaaaacaaaactatgaatattt 3268355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18480 - 18425
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  18480 tattttgtagggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 18425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16539318 - 16539263
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  16539318 tattttgtagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 16539263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17205211 - 17205266
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||    
T  17205211 tattttgtagggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 17205266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18030868 - 18030923
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||    
T  18030868 tattttgtagggactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 18030923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24045932 - 24045987
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||    
T  24045932 tattttgtagggactaaaaacaaaactgtgaatatttataggaactaaaaacttaa 24045987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25059542 - 25059597
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | ||||||||||||| | ||||||||| ||||||||||||||||    
T  25059542 tattttgtaggaactaaaaacaaaactgtgaatatttatagaaactaaaaacttaa 25059597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4062592 - 4062647
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||||||||||||||||| | ||||||||| |  |||||||||||||    
T  4062592 tattttatagggattaaaaacaaaactgtgaatatttatagggactaaaaacttaa 4062647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7466392 - 7466337
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| | ||||||||| ||||||||||| ||||    
T  7466392 tattttatagggactaaaaacaaaactgtgaatatttatagaaactaaaaatttaa 7466337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9242439 - 9242384
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||    
T  9242439 tattttgtagggactaaaaacaaaattctaaatatttatagggactaaaaacttaa 9242384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12145378 - 12145323
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  12145378 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 12145323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12757458 - 12757513
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| |||||| |||||| ||||||||||| |  |||||||||||||    
T  12757458 tattttgtagggactaaaaataaaactgtaaatatttatagggactaaaaacttaa 12757513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14863857 - 14863802
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| | ||||||||| || |||||||||||||    
T  14863857 tattttgtaaggactaaaaacaaaactgtgaatatttatagagactaaaaacttaa 14863802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15837459 - 15837404
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||| | | ||||||||| | ||||||||||||||    
T  15837459 tattttgtagggactaaaaacaaaattgttaatatttataggaactaaaaacttaa 15837404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18328066 - 18328121
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||| | ||||||||||||| ||||||||||| |  |||||||||||||    
T  18328066 tattttgtaggaactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 18328121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18501782 - 18501727
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  18501782 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 18501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22787421 - 22787476
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  22787421 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 22787476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25059413 - 25059358
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  25059413 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 25059358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32462181 - 32462126
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  32462181 tattttgtaaggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 32462126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32647201 - 32647256
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  32647201 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 32647256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 650151 - 650114
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatattta 38  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  650151 tattttgtagggactaaaaacaaaactgtaaatattta 650114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 5359872 - 5359925
Alignment:
Q  3 ttttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||| |||||| ||||||||||||| || |||||||| ||||| ||||||||||    
T  5359872 ttttatagggactaaaaacaaaactgtagatatttatagaaaccaaaaacttaa 5359925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31842648 - 31842700
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaact 53  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  ||||||||||    
T  31842648 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaact 31842700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11997454 - 11997399
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||||||||||||||||| | ||||||||| || |||||||||||||    
T  11997454 tattttatagggattaaaaacaaaactgtgaatatttatagagactaaaaacttaa 11997399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32807041 - 32806986
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||| || ||||||||||| ||||||||||||| | ||||||||||||||    
T  32807041 tattttgtagagactaaaaacaaaattataaatatttataggaactaaaaacttaa 32806986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35804382 - 35804437
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||| |||||||||||||||| ||||||||||| |  |||||||||||||    
T  35804382 tattttgtagtgattaaaaacaaaactgtaaatatttatagggactaaaaacttaa 35804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12919494 - 12919532
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  12919494 tattttgtagggattaaaaacaaaactatgaatatttat 12919532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36157473 - 36157521
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaa 49  Q
    ||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  36157473 tattttgtagggattaaaaacaaaactgtgaatatttataggaactaaa 36157521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1842479 - 1842424
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  1842479 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 1842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3060569 - 3060624
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  3060569 tattttttagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 3060624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6452223 - 6452278
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  6452223 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 6452278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8412362 - 8412307
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  8412362 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 8412307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8459406 - 8459351
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  8459406 tattttgtagggactaaaaacaaaactgttaatatttatagggactaaaaacttaa 8459351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10590667 - 10590612
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||| ||||| | ||||||||||||||    
T  10590667 tattttgtagggactaaaaacaaaactgtgaatgtttataggaactaaaaacttaa 10590612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11339000 - 11338945
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  11339000 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 11338945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22519580 - 22519525
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  22519580 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 22519525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23275057 - 23275112
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  23275057 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 23275112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27704567 - 27704512
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  27704567 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 27704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29520684 - 29520739
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  29520684 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 29520739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35023406 - 35023351
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  35023406 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 35023351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35023565 - 35023620
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  35023565 tattttatagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 35023620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42513497 - 42513442
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||| ||||||||||||||||||| | ||||||||| || | |||||||||||    
T  42513497 tattttgcagggattaaaaacaaaactgtgaatatttatagagaataaaaacttaa 42513442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48148955 - 48149009
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  48148955 tattttgtagggactaaaaacaaaactgtaaatatttatag-gactaaaaacttaa 48149009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49487996 - 49488051
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  49487996 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 49488051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50309631 - 50309686
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  50309631 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 50309686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11997613 - 11997651
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  11997613 tattttgtagggattaaaaacaaaactgtgaatatttat 11997651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 13128537 - 13128483
Alignment:
Q  2 attttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  13128537 attttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 13128483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 23257180 - 23257234
Alignment:
Q  2 attttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  23257180 attttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 23257234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35910823 - 35910785
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  35910823 tattttgtagggactaaaaacaaaactatgaatatttat 35910785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44258761 - 44258723
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  44258761 tattttgtagggattaaaaacaaaattctaaatatttat 44258723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 44595962 - 44596010
Alignment:
Q  8 tagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  44595962 tagggactaaaaacaaaactgtaaatatttatagtgactaaaaacttaa 44596010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 48737948 - 48737900
Alignment:
Q  8 tagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| ||||||||||||||| ||||||||| || |||||||| ||||    
T  48737948 tagggactaaaaacaaaactatgaatatttatagagactaaaaatttaa 48737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 352664 - 352626
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttat 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  352664 tattttgtagggactaaaaacaaaactataaatatttat 352626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26507 - 26452
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||  | ||||||||| | ||||||||||||||    
T  26507 tattttgtagggactaaaaacaaaaccgtgaatatttataggaactaaaaacttaa 26452  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22194 - 22249
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    |||||| |||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  22194 tattttatagggactaaaaacaaaactgtaaatatttatagggactaaaaacttaa 22249  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49019 - 49074
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||  | ||||||||||||| | ||||||||| ||||||||||||||||    
T  49019 tattttgtagaaactaaaaacaaaactgtgaatatttatagaaactaaaaacttaa 49074  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 47396 - 47349
Alignment:
Q  9 agggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||||||||| | ||||||||| || |||||||||||||    
T  47396 agggattaaaaacaaaactgtgaatatttatcgagactaaaaacttaa 47349  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 262696 - 262641
Alignment:
Q  1 tattttgtagggattaaaaacaaaactataaatatttattgaaactaaaaacttaa 56  Q
    ||||||||||||| ||||||||||||| | ||||||||| |  |||||||||||||    
T  262696 tattttgtagggactaaaaacaaaactgtgaatatttatagggactaaaaacttaa 262641  T

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